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Insights Into Genomic Structure and Evolutionary Processes of Coastal Suaeda Species in East Asia Using Cpdna, Ndna, and Genome
www.nature.com/scientificreports OPEN Insights into genomic structure and evolutionary processes of coastal Suaeda species in East Asia using cpDNA, nDNA, and genome‑wide SNPs Jong‑Soo Park, Dong‑Pil Jin & Byoung‑Hee Choi* Species in the genus Suaeda have few diagnostic characters and substantial morphological plasticity. Hence, regional foras do not provide clear taxonomic information for Suaeda spp. in East Asia. In order to assess the taxonomy of four species in the genus Suaeda (S. australis, S. maritima, S. japonica, and S. heteroptera), cpDNA (rpl32‑trnL and trnH‑psbA), nDNA (ITS), and MIG‑seq analyses were carried out. Genome‑wide SNP results indicated three lineages: (1) S. australis in Korea and S. maritima in Japan, (2) S. maritima in Korea and S. heteroptera in China, and (3) S. japionica. In phylogenetic trees and genotype analyses, cpDNA and nDNA results showed discrepancies, while S. japonica and S. maritima in Korea, and S. heteroptera in China shared the same haplotype and ribotype. We suggest that the shared haplotype may be due to chloroplast capture. Based on our results, we assume that S. japonica was formed by homoploid hybrid speciation between the two lineages. Te genus Suaeda Forssk. ex J.F. Gmel., in the Amaranthaceae family 1, comprises approximately 80–100 spe- cies of halophytic herbs or shrubs distributed worldwide in semiarid and arid regions, and along the seashores, including the Pacifc 2–5. An integrated molecular and morphological phylogenetic study of the subfamily Suae- doideae Ulbr. suggests that the genus Suaeda is comprised of two subgenera (Brezia (Moq.) Freitag & Schütze, and Suaeda) and eight sections (Brezia (Moq.) Volk. -
5055 Publication Date 2018 Document Version Final Published Version Published in Peerj License CC by Link to Publication
UvA-DARE (Digital Academic Repository) A novel approach to study the morphology and chemistry of pollen in a phylogenetic context, applied to the halophytic taxon Nitraria L. (Nitrariaceae) Woutersen, A.; Jardine, P.E.; Bogotá-Angel, R.G.; Zhang, H.-X.; Silvestro, D.; Antonelli, A.; Gogna, E.; Erkens, R.H.J.; Gosling, W.D.; Dupont-Nivet, G.; Hoorn, C. DOI 10.7717/peerj.5055 Publication date 2018 Document Version Final published version Published in PeerJ License CC BY Link to publication Citation for published version (APA): Woutersen, A., Jardine, P. E., Bogotá-Angel, R. G., Zhang, H-X., Silvestro, D., Antonelli, A., Gogna, E., Erkens, R. H. J., Gosling, W. D., Dupont-Nivet, G., & Hoorn, C. (2018). A novel approach to study the morphology and chemistry of pollen in a phylogenetic context, applied to the halophytic taxon Nitraria L. (Nitrariaceae). PeerJ, 6, [e5055]. https://doi.org/10.7717/peerj.5055 General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. -
Habitat Restoration for Orange Bellied Parrot 2004
Habitat Restoration Guidelines within the Coorong and Goolwa to Wellington LAP Regions Orange-bellied Parrot Written by Ivan Clarke Technical input and editing by Neville Bonney. In partnership with Trees for Life. Disclaimer Rural Solutions SA and its employees do not warrant or make any representation regarding the use, or results of the use, of the information contained herein as regards to its correctness, accuracy, reliability, currency or otherwise. Rural Solutions SA and its employees expressly disclaim all liability or responsibility to any person using the information or advice. © Rural Solutions SA This work is copyright. Unless permitted under the Copyright Act 1968 (C’wlth), no part may be reproduced by any process without prior written permission from Rural Solutions SA. Requests and inquiries concerning reproduction and rights should be addressed to the Business Manager, Business Development & Marketing, Rural Solutions SA, GPO Box 1671, Adelaide SA 5001. © RURAL SOLUTIONS SA 2004 1 ACKNOWLEDGEMENTS Ron Taylor for information relating to dune stabilisation techniques and species characteristics. Bill New for the analysis of GPS points and production of project maps © RURAL SOLUTIONS SA 2004 2 Acknowledgements 1 1 SPECIES DESCRIPTION 1 1.1 Ecology 1 1.2 Habitat 1 1.3 Linkages 2 2 HABITAT RESTORATION 4 2.1 Natural Area Management 4 2.2 Revegetation Methods 5 3 ESTABLISHMENT TECHNIQUES 7 3.1 Saline Swamp 7 3.2 Dune Restoration 10 4 SITE MANAGEMENT 11 4.1 Weed Control 11 4.2 Supplementary Planting 12 4.3 Vermin Control 13 5 TRIALS -
Understorey Network
Understorey Network Spring Newsletter 2005 No.33 In this Issue • Gandering at the Goosefoot • Seed Collecting this Summer • Inverawe Native Gardens visit • Understories: grassland • Feature Plant: Atriplex cinerea Project Manager’s Report CONTACT DETAILS Its been terrific growing weather lately, with Enquiries and newsletter articles to : warm sunny days and the occasional rain shower, so Project Manager Ruth Mollison if you haven’t already done so—get your native Phone: Office (03) 6223 6377 seeds into tubes as soon as possible. Mobile: 0407 352 479 The wild spring flowers have been fantastic this Email: ruth.mollison@understorey-network. year also, promising a bumper seed set in the next org.au few months. It’s a good time to go for a wander in PO Box 9868 Hobart 7001. a patch of convenient bush, and identify those 110 Hampden Road, Battery Point. plants that will be useful for collecting seeds from once it has set. More details on seed collecting are Memberships to: in the newsletter. Do attend one of the seed col- Anne Griffiths, lecting field trips listed in the newsletter. PO Box 126, Huonville 7109. Some of the activities of the network over the last few months include propagation workshops at the Growers Scheme Coordinators North/NW Arboretum at Eugenana and the Botanical gardens Anna Povey Ph: (03) 6334 6633 in Hobart, both very well attended and received. We had a Preparing to Plant Day at Inverawe native Growers Scheme Coordinator South gardens at Margate, the AGM at the Botanical Gar- Louise Jerrim Ph: (03) 6295 0780 dens with guest speaker Mark Fountain on the Mil- lenium Seedbank, and a weed control day at Eliza- Visit our website and Plant Propagation beth Town. -
Coastal Saltmarsh
Coastal saltmarsh March 2013, Primefact 1256, First edition Trevor Daly, Fisheries Conservation Manager, Fisheries Ecosystems Unit What is coastal saltmarsh? Coastal saltmarsh (also referred to as New South Wales). Distribution of coastal saltmarsh) is an intertidal community of saltmarsh is influenced by the combination of plants, such as sedges, rushes, reeds, elevation, salinity and frequency of inundation. grasses, succulent herbs and low shrubs that Coastal saltmarsh can range from narrow can tolerate high soil salinity and occasional fringes of one or two species of plants on inundation with salt water. The term ‘saltmarsh’ steeper shorelines to almost flat expanses of is used to describe individual plants, groups of multiple species extending hundreds of metres plants and the general estuarine habitat in width. Saltmarsh can also occur along dominated by these plants. estuary foreshores many kilometres inland Saltmarsh occupies the high tide zone on from the sea entrance. Saltmarsh communities sheltered soft substrate foreshores of coastal can be dominated by a single plant species or lakes and estuaries, often occurring behind occur as a mosaic with the biodiversity of plant mangroves (Figure 1). It is usually only species increasing in higher elevation areas intermittently inundated by medium to high which are less frequently inundated. tides. Saltmarsh plants are adapted to Saltmarsh plants reproduce sexually by hypersaline conditions which most other flowering and producing seed (which is vegetation cannot tolerate. spread by birds, insects, wind or tidal flow), Saltmarsh areas are characterised by low or asexually by cloning individual plant parts vegetation interspersed with bare patches or or lateral spread into adjacent areas through salt pans (although these are not common in the production of new rhizomes. -
Molekulare Systematik Der Gattung Suaeda (Chenopodiaceae) Und
Molekulare Systematik der Gattung Suaeda (Chenopodiaceae) und Evolution des C4-Photosynthesesyndroms Inaugural-Dissertation zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaften (Dr. rer. nat.) im Fachbereich Naturwissenschaften der Universität Kassel vorgelegt von: Peter Wolfram Schütze aus Halle/Saale Kassel, November 2008 Betreuer: Prof. Dr. Kurt Weising, Prüfungskommission: Prof. Dr. Kurt Weising (1. Gutachter) Prof. Dr. Helmut Freitag (2. Gutachter) Prof. Dr. Ewald Langer (Beisitzer) Dr. Frank Blattner (Beisitzer) Tag der mündlichen Prüfung: 17. Februar 2009 2 Inhaltsverzeichnis Inhaltsverzeichnis 1. Einleitung ........................................................................................................................................ 5 1.1. Vorbemerkungen.................................................................................................................... 5 1.2. Charakteristik der Suaedoideae............................................................................................. 6 1.2.1. Systematischer Überblick.............................................................................................. 6 1.2.2. Biologie, Klassifikationsmerkmale und Verbreitung der Sippen.................................... 9 1.2.3. Besonderheiten im Photosyntheseweg....................................................................... 12 1.2.4. Evolutionäre Trends innerhalb der Suaedoideae........................................................ 14 1.2.5. Theorien zur Sippenevolution - eine Synthese -
Atoll Research Bulletin No. 348 Plants of the Reef
ATOLL RESEARCH BULLETIN NO. 348 PLANTS OF THE REEF ISLANDS OF THE NORTHERN GREAT BARRIER REEF F. RAYMOND FOSBERG AND DAVID R STODDART ISSUED BY NATIONAL MUSEUM OF NATURAL HISTORY SMITHSONIAN INSTITUTION WASHINGTON D. C., USA JULY 1991 PLANTS OF THE REEF ISLANDS OF THE NORTHERN GREAT BARRIER REEF Abstract This paper records more than 380 species of vascular plants in 86 families from some 80 islands of the Great Barrier Reef north of 16'57's. The list increases by an order of magnitude the generally perceived species diversity of the coral islands of the Great Barrier Reef. Introduction This paper lists the plants of the coral islands of the Great Barrier Reef north of Sudbury Cay (Latitude 16'57's.); it extends to Arden Island, Dove Island and Masig (Yorke) Island in Latitude g045'S. It is based primarily on large collections made by Stoddart (1107 numbers, generally each in five sets) from 40,islands or island-groups, and sight records from a further 19 island-groups, obtained during detailed mapping of reef islands between 16'57's (Sudbury Cay) and 11'36's (Raine Island). These collections have been augmented by the collections made subsequently by R. Bucklcy and H. Heatwole, deposited in the Queensland Herbarium, and made available to us by that institution. We have attempted to include, so far as possible, previous literature records (dating back to collections by Sir Joseph Banks on Cook's first expedition in Endeavour), together with specimens we have found in various herbaria. Unfortunately we have been unable to trace (with few exceptions) the collections made by G. -
Saltmarsh Plants Without a Hand Lens
RI VER Group’s “Com m on Salt m arsh Plants of the Tow nsville Coastal Plains” INTRODUCTION This field guide contains enough information to identify common saltmarsh plants without a hand lens. This guide does not include all plants likely to be seen in saltmarshes. The term ‘saltmarsh’ describes both a habitat type and the plants found there, similar to mangroves. The flat, low-lying saltmarshes are formed by the even deposition of silts and fine sediments from streams and estuaries as they near the sea. Saltmarshes are found in sheltered estuaries between the landward side of mangroves (marine system) and salt-free land. They have an irregular covering of saltwater caused by higher than normal tides. Saltmarshes may contain salt tolerant vascular plants (halophytes), as well as mosses, algae and bacteria. Plants within this system are typically found in zones differentiated by any number of factors including depth and length of tide, soil oxygen availability, salt levels and nutrient levels. A saltmarsh species may show considerable variation due to microhabitat and seasonal factors, with shape, height and colour being the main variables. Saltmarshes, along with their associated mangroves play an important role as they increase the range of habitats found in this ecosystem. The high level of organic matter produced from these relatively few species of plants provides a rich supply of nutrients supporting a great diversity of marine life. Saltmarshes also have value in stabilising and reclaiming land. INDEX PAGE Quick Reference Guide -
A Stocktake of Recovery Activities Undertaken for the Orange-Bellied Parrot (Neophema Chrysogaster)
SUPERSEDED SUPERSEDED SUPERSEDED BirdLife Australia BirdLife Australia was founded in 1901 and works to conserve native birds and biological diversity in Australasia and Antarctica, through the study and management of birds and their habitats, and the education and involvement of the community. BirdLife Australia produces a range of publications, including Emu, a quarterly scientific journal; Australian BirdLife, a quarterly magazine for all members; Conservation Statements; BirdLife Australia Monographs; the BirdLife Australia Report series; and the Handbook of Australian, New Zealand and Antarctic Birds. It also maintains a comprehensive ornithological library and several scientific databases covering bird distribution and biology. Membership of BirdLife Australia is open to anyone interested in birds and their habitats, and concerned about the future of our avifauna. For further information about membership, subscriptions and database access, contact BirdLife Australia 60 Leicester Street, Suite 2-05 Carlton VIC 3053 Tel: (03) 9347 0757 E-mail: [email protected] © BirdLife Australia This report is copyright. Apart from any fair dealings for the purposes of private study, research, criticism, or review as permitted under the Copyright Act, no part may be reproduced, stored in a retrieval system, or transmitted, in any form or by means, electronic, mechanical, photocopying, recording, or otherwise without prior written permission. Enquiries to BirdLife Australia. Recommended citation: BirdLife Australia. 2018. A stocktake of recovery activities undertaken for the Orange-bellied Parrot (Neophema chrysogaster). Unpublished report for the Department of Environment and Energy by BirdLife Australia. This report was prepared by BirdLife Australia under contract to the Department of Environment and Energy. Disclaimers: This publication may be of assistance to you and every effort has been undertaken to ensure that the information presented within is accurate. -
Native Vegetation of Estuaries and Saline Waterways in South Western Australia
Native vegetation of estuaries and saline waterways in south Western Australia Department of Conservation and Land Management 1997 USING THIS BOOKLET The Water and Rivers Commission has published two companion booklets, one entitled Native vegetation of freshwater rivers and creeks in south Western Australia and this present one, Native vegetation of estuaries and saline waterways in south Western Australia to encourage protection and restoration of the streamline vegetation which is vital to maintaining the ecology and water quality of our creeks, rivers and estuaries. It is hoped that these booklets will be useful to community rivercare and landcare groups and other people interested in local flora who wish to identify common plants found along the various types of waterways. If you are interested in joining volunteer rivercare groups, you can contact the appropriate local council or the Water and Rivers Commission. This booklet deals with the species commonly encountered near saline waterways and wetlands. Because the flora of Western Australia is rich and varied some of the species described here may be confused with plants of other habitats so ensure that your plant has come from a saline environment. The terminology has been simplified as far as possible and a glossary of terms is provided at the back. Inside the back cover there is a transect showing where the various plants may be found and a page index for each plant. For further information about the vegetation of saline waterways and other habitats a reference list is provided. ACKNOWLEDGMENTS This work was prepared for the Water and Rivers Commission by Lisa Chalmers (Policy and Planning) and Judy Wheeler (Conservation and Land Management). -
2019 Census of the Vascular Plants of Tasmania
A CENSUS OF THE VASCULAR PLANTS OF TASMANIA, INCLUDING MACQUARIE ISLAND MF de Salas & ML Baker 2019 edition Tasmanian Herbarium, Tasmanian Museum and Art Gallery Department of State Growth Tasmanian Vascular Plant Census 2019 A Census of the Vascular Plants of Tasmania, including Macquarie Island. 2019 edition MF de Salas and ML Baker Postal address: Street address: Tasmanian Herbarium College Road PO Box 5058 Sandy Bay, Tasmania 7005 UTAS LPO Australia Sandy Bay, Tasmania 7005 Australia © Tasmanian Herbarium, Tasmanian Museum and Art Gallery Published by the Tasmanian Herbarium, Tasmanian Museum and Art Gallery GPO Box 1164 Hobart, Tasmania 7001 Australia https://www.tmag.tas.gov.au Cite as: de Salas, MF, Baker, ML (2019) A Census of the Vascular Plants of Tasmania, including Macquarie Island. (Tasmanian Herbarium, Tasmanian Museum and Art Gallery, Hobart) https://flora.tmag.tas.gov.au/resources/census/ 2 Tasmanian Vascular Plant Census 2019 Introduction The Census of the Vascular Plants of Tasmania is a checklist of every native and naturalised vascular plant taxon for which there is physical evidence of its presence in Tasmania. It includes the correct nomenclature and authorship of the taxon’s name, as well as the reference of its original publication. According to this Census, the Tasmanian flora contains 2726 vascular plants, of which 1920 (70%) are considered native and 808 (30%) have naturalised from elsewhere. Among the native taxa, 533 (28%) are endemic to the State. Forty-eight of the State’s exotic taxa are considered sparingly naturalised, and are known only from a small number of populations. Twenty-three native taxa are recognised as extinct, whereas eight naturalised taxa are considered to have either not persisted in Tasmania or have been eradicated. -
A Tasmanian Saltmarsh Wetland Plants Checklist
Plant Family Scientific names Common names Book Recorded Average Flowering (* - introduced; Page (present, Height Status # - listed as rare in TAS) No. doubtful) (in cm) (in flower TASMANIAN SALTMARSH WETLAND PLANTS or not) CHECKLIST SURVEY DETAILS Saltmarsh site name: Saltmarsh cluster name (bay, river etc.): Survey location details (landmarks etc.): Geo-location (lat, long or E, N): Recorders: Survey date: Start time: End time: SURVEY METHOD (PS) Point-based 2-ha Area Search (TS) Transect-based Fixed-Route Monitoring (IS) Incidental Search* *for IS please note if plants were recorded on nearby saltmarsh upland margins. Details of survey methods are available through contacts listed in the last page. Refer to A guide to the plants of Tasmanian saltmarsh wetlands (2014) for identification support. Site specific species list can be used as a starting point for monitoring the plants of particular saltmarsh sites by recording the presence and absence of species. This could be done through a ‘bio-blitz’ conducted during the warmer months (when most species are in flower and are easier to identify) once every few years. These data will help improve our understanding of the Statewide distribution of saltmarsh plants, their ecology and biogeography (relating distribution data to local and regional environmental factors). When these data are collected over a long term (over decades), they can also indicate species-range shifts that occur as a consequence of climate change. Typical cross-section of saltmarsh habitat in the coastal landscape. Plant Family Scientific names Common names Book Recorded Average Flowering Plant Family Scientific names Common names Book Recorded Average Flowering (* - introduced; Page (present, Height Status (* - introduced; Page (present, Height Status # - listed as rare in TAS) No.1 doubtful)2 (in cm)3 (in flower # - listed as rare in TAS) No.