Reproductive Efficiency in Reciprocal Crosses of Arachis Monticoza with A
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Peanut (Arachis Hypogaea, Fabaceae)L P
Origins of Resistances to Rust and Late Leaf Spot in Peanut (Arachis hypogaea, Fabaceae)l P. SUBRAHMANYAM.V. RAMANATHARAO, D. MCDONALD. J. P. Moss, AND R. W. GIBBONS' 7'hcc~ulti~utedpc~a,r1~/(Arachis hypogaea. Fubaccac) is belic~vedto have orlginutcjd ulorrg I/?(,C~USIC~II slo/)c,s (?fihr ..lnrl(s in Bo111.iaund northerr1 Argentina. The crop 1s t~orcgroLt,tr thronghout iro~~ic~ulutid warm tonpiJralr regron.c. .4rnong diseases uttac.krn,q pc,ut~lrrs,rlitr cwlr.,c~/hjl Puccinia arachidis arid larr, Ieuf'spot cuuscd hj, Phaeoisariopsis personata urea flic r?io.sl rt?iportan/ and dcstrurttvc~on a ~,orld~,idr .\c,olc. noti? pa//iogc,tr~,rr,stric./cd rn host run@, to Arachis, prohahly originated and c,oc,vol\,ed irl .Siiut/r .,ltnrriiu alclt~y~i'ith thrir /~ost.s.In rcwnr years there has heen 1?11i(./r ~rtlphusr.\OIL .SC~(~CIIIII~c!f pcwn~rt gcrtnpla.\t?i fi?r rerlstuncp to thmr di,seases, :I/ tile It~tcrtiut~o~ldC~OIJX Rc,~eurc.h It~.sti/tttc~,J~r tho St7tni-.-lrrd Troprc,s IICRIS.4 T). Iticlra. .\ottrc7 10.000 i~cntt~tt,yc,rr)ipIa.s~~~ uc,c.c.~.sions u,crc .sc,rccnc,d fhr reslstuncc to rlrst and Iutcz I(,u/ .spot d~rrtn,y1977-1 4X.F u~idsourc,es (?fresi.vt~tii,(,inderiti/rcd,[i)r c,itltrr or both put1iogrtr.c. (If /lie t.r~.vistut~rg~~trotjpc:~, uboul 87% helon~erlto A. hypogaca rur. fastigiata utitl 1.?"0 lo vtrr. -
(Arachis Hypogaea) and Its Most Closely Related Wild Species Using
Annals of Botany 111: 113–126, 2013 doi:10.1093/aob/mcs237, available online at www.aob.oxfordjournals.org A study of the relationships of cultivated peanut (Arachis hypogaea) and its most closely related wild species using intron sequences and microsatellite markers Downloaded from https://academic.oup.com/aob/article-abstract/111/1/113/182224 by University of Georgia Libraries user on 29 November 2018 Ma´rcio C. Moretzsohn1,*, Ediene G. Gouvea1,2, Peter W. Inglis1, Soraya C. M. Leal-Bertioli1, Jose´ F. M. Valls1 and David J. Bertioli2 1Embrapa Recursos Gene´ticos e Biotecnologia, C.P. 02372, CEP 70.770-917, Brası´lia, DF, Brazil and 2Universidade de Brası´lia, Instituto de Cieˆncias Biolo´gicas, Campus Darcy Ribeiro, CEP 70.910-900, Brası´lia-DF, Brazil * For correspondence. E-mail [email protected] Received: 25 June 2012 Returned for revision: 17 August 2012 Accepted: 2 October 2012 Published electronically: 6 November 2012 † Background and Aims The genus Arachis contains 80 described species. Section Arachis is of particular interest because it includes cultivated peanut, an allotetraploid, and closely related wild species, most of which are diploids. This study aimed to analyse the genetic relationships of multiple accessions of section Arachis species using two complementary methods. Microsatellites allowed the analysis of inter- and intraspecific vari- ability. Intron sequences from single-copy genes allowed phylogenetic analysis including the separation of the allotetraploid genome components. † Methods Intron sequences and microsatellite markers were used to reconstruct phylogenetic relationships in section Arachis through maximum parsimony and genetic distance analyses. † Key Results Although high intraspecific variability was evident, there was good support for most species. -
Arachis Inflata: a New B Genome Species of Arachis (Fabaceae)
Seijo, G. J., M. Atahuachi, C. E. Simpson & A. Krapovickas. 2021. Arachis G.inflata J. Seijo: A New et B al., Genome A new species B genome of Ara -species of Arachis chis (Fabaceae). Bonplandia 30(2): 169-174. Doi: http://dx.doi.org/10.30972/bon.3024942 Recibido 23 Febrero 2021. Aceptado 7 Abril 2021. Publicado en línea: 10 Junio 2021. Publicado impreso: 15 Agosto 2021. ISSN 0524-0476 impreso. ISSN 1853-8460 en línea. Arachis inflata: A New B Genome species of Arachis (Fabaceae) Arachis inflata: una nueva especie de Arachis (Fabaceae) del Genoma B Guillermo J. Seijo1,2 , Margoth Atahuachi3 , Charles E. Simpson4 & Antonio Krapovickas1 Summary: Great efforts have been done to collect germplasm of the Arachis genus in South America, however, many regions still remain underexplored. Under the hypothesis that these regions have new and diverse populations/species of Arachis, several expeditions were carried out since 2000 in Bolivia, to increase the documentation of the genus diversity. As a first result of these explorations, a new species of section Arachis with B genome is formally described. Arachis inflata is closely related to A. magna and A. ipaënsis, but it can be clearly distinguished from them, and from any other species of the genus, for having a type of fruit with a completely distinct morphology. The fruit has a smooth epicarp, but shows a bullated aspect, due to the presence of air chambers in the mesocarp. Key words: Germplasm, peanut, Planalto Chiquitano. Resumen: Se han realizado grandes esfuerzos para coleccionar germoplasma del género Arachis en Sudamérica, sin embargo, aún quedan muchas regiones subexploradas. -
Utilization of Wild Arachis Species at ICRISAT
View metadata, citation and similar papers at core.ac.uk brought to you by CORE Utilization of Wild Arachis Speciesprovided at by ICRISAT ICRISAT Open Access Repository A. K. Singh, D. C. Sastri and J. P. Moss* One of the possibilities for increasing the yield leaf spots. These were A. cardenasii Krap. and of groundnut, particularly in the Semi-Arid Greg., nomen n u d u m , A. chacoense Krap. and Tropics, is breeding varieties w i t h resistance to Greg., nomen n u d u m , and Arachis species Coll. pests and diseases. S o me progress has been HLK 410 which were reported as i m m u n e to made in this field, but the improvements that Cercosporidium personatum, highly resistant can be made by breeders are limited by the to Cercospora arachidicola, and resistant to availability of genes within A. hypogaea. Collec- both (Abdou 1966; Sharief 1972; Abdou et al. tions of wild species f r o m South America have 1974; Hammons, personal communication). made available a wider range of genes, espe- The groundnut cytogenetics program at cially genes for disease resistance. The richness ICRISAT was initiated in April 1978 with the of Arachis germplasm collection offers a great object of making the fullest possible use of the opportunity for anyone interested in the im- genus Arachis. Cooperation with the Genetic provement of this crop (Bunting et al. 1974, Resources Unit, pathologists, entomologists, Simpson 1976; Smartt et a I. 1978a, b; Gregory and microbiologists has increased the number and Gregory 1979). of wild species at ICRISAT and our knowledge However the c y t o t a x o n o m y of the genus of the desirable genes which they contain. -
Taxonomy of the Genus Arachis (Leguminosae)
BONPLANDIA16 (Supi): 1-205.2007 BONPLANDIA 16 (SUPL.): 1-205. 2007 TAXONOMY OF THE GENUS ARACHIS (LEGUMINOSAE) by AntonioKrapovickas1 and Walton C. Gregory2 Translatedby David E. Williams3and Charles E. Simpson4 director,Instituto de Botánicadel Nordeste, Casilla de Correo209, 3400 Corrientes, Argentina, deceased.Formerly WNR Professor ofCrop Science, Emeritus, North Carolina State University, USA. 'InternationalAffairs Specialist, USDA Foreign Agricultural Service, Washington, DC 20250,USA. 4ProfessorEmeritus, Texas Agrie. Exp. Stn., Texas A&M Univ.,Stephenville, TX 76401,USA. 7 This content downloaded from 195.221.60.18 on Tue, 24 Jun 2014 00:12:00 AM All use subject to JSTOR Terms and Conditions BONPLANDIA16 (Supi), 2007 Table of Contents Abstract 9 Resumen 10 Introduction 12 History of the Collections 15 Summary of Germplasm Explorations 18 The Fruit of Arachis and its Capabilities 20 "Sócias" or Twin Species 24 IntraspecificVariability 24 Reproductive Strategies and Speciation 25 Dispersion 27 The Sections of Arachis ; 27 Arachis L 28 Key for Identifyingthe Sections 33 I. Sect. Trierectoides Krapov. & W.C. Gregorynov. sect. 34 Key for distinguishingthe species 34 II. Sect. Erectoides Krapov. & W.C. Gregory nov. sect. 40 Key for distinguishingthe species 41 III. Sect. Extranervosae Krapov. & W.C. Gregory nov. sect. 67 Key for distinguishingthe species 67 IV. Sect. Triseminatae Krapov. & W.C. Gregory nov. sect. 83 V. Sect. Heteranthae Krapov. & W.C. Gregory nov. sect. 85 Key for distinguishingthe species 85 VI. Sect. Caulorrhizae Krapov. & W.C. Gregory nov. sect. 94 Key for distinguishingthe species 95 VII. Sect. Procumbentes Krapov. & W.C. Gregory nov. sect. 99 Key for distinguishingthe species 99 VIII. Sect. -
Fruits and Seeds of Genera in the Subfamily Faboideae (Fabaceae)
Fruits and Seeds of United States Department of Genera in the Subfamily Agriculture Agricultural Faboideae (Fabaceae) Research Service Technical Bulletin Number 1890 Volume I December 2003 United States Department of Agriculture Fruits and Seeds of Agricultural Research Genera in the Subfamily Service Technical Bulletin Faboideae (Fabaceae) Number 1890 Volume I Joseph H. Kirkbride, Jr., Charles R. Gunn, and Anna L. Weitzman Fruits of A, Centrolobium paraense E.L.R. Tulasne. B, Laburnum anagyroides F.K. Medikus. C, Adesmia boronoides J.D. Hooker. D, Hippocrepis comosa, C. Linnaeus. E, Campylotropis macrocarpa (A.A. von Bunge) A. Rehder. F, Mucuna urens (C. Linnaeus) F.K. Medikus. G, Phaseolus polystachios (C. Linnaeus) N.L. Britton, E.E. Stern, & F. Poggenburg. H, Medicago orbicularis (C. Linnaeus) B. Bartalini. I, Riedeliella graciliflora H.A.T. Harms. J, Medicago arabica (C. Linnaeus) W. Hudson. Kirkbride is a research botanist, U.S. Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, BARC West Room 304, Building 011A, Beltsville, MD, 20705-2350 (email = [email protected]). Gunn is a botanist (retired) from Brevard, NC (email = [email protected]). Weitzman is a botanist with the Smithsonian Institution, Department of Botany, Washington, DC. Abstract Kirkbride, Joseph H., Jr., Charles R. Gunn, and Anna L radicle junction, Crotalarieae, cuticle, Cytiseae, Weitzman. 2003. Fruits and seeds of genera in the subfamily Dalbergieae, Daleeae, dehiscence, DELTA, Desmodieae, Faboideae (Fabaceae). U. S. Department of Agriculture, Dipteryxeae, distribution, embryo, embryonic axis, en- Technical Bulletin No. 1890, 1,212 pp. docarp, endosperm, epicarp, epicotyl, Euchresteae, Fabeae, fracture line, follicle, funiculus, Galegeae, Genisteae, Technical identification of fruits and seeds of the economi- gynophore, halo, Hedysareae, hilar groove, hilar groove cally important legume plant family (Fabaceae or lips, hilum, Hypocalypteae, hypocotyl, indehiscent, Leguminosae) is often required of U.S. -
Pinto Peanut (Arachis Pintoi) | Feedipedia
Pinto peanut (Arachis pintoi) | Feedipedia Animal feed resources Feedipedia information system Home About Feedipedia Team Partners Get involved Contact us Pinto peanut (Arachis pintoi) Automatic translation Description Nutritional aspects Nutritional tables References Anglais ▼ Click on the "Nutritional aspects" tab for recommendations for ruminants, pigs, poultry, rabbits, horses, fish and crustaceans Feed categories All feeds drilling plants Cereal and grass forages Legume forages Forage trees Aquatic plants Common names Other forage plants Plant products/by-products Pinto peanut [Inglés]; arachide Pinto [French]; perennial forage peanut, perennial peanut [Spanish]; amendoim forrageiro Cereal grains and by-products [Portuguese]; kacang pinto [Indonesian]; Cỏ đậu [Vietnamese]; ถวั่ ลสงิ เถา [Thai] Legume seeds and by-products Oil plants and by-products Species Fruits and by-products Roots, tubers and by-products Arachis pintoi Krapov. & W.C. Greg. [Fabaceae] Sugar processing by-products Plant oils and fats Feed categories Other plant by-products Feeds of animal origin Legume forages Oil plants and by-products drilling plants Animal by-products Dairy products/by-products Related feed(s) Animal fats and oils Insects Description Other feeds Minerals Pinto peanut (Arachis pintoi Krapov. & W.C. Greg.) is a perennial tropical legume useful for pasture, ground cover and as an Other products ornament. Pinto peanut is a valuable forage, easy to establish, persistent, and combines well in mixtures under a wide range of climate and soil conditions, including heavy grazing (Khamseekhiew et al., 2001). Latin names Morphology Plant and animal families Pinto peanut is a stoloniferous perennial creeping legume that can reach 20-50 cm in height and form dense swards. -
Genome Amplification 81
Application of high performance compute technology in bioinformatics Sven Warris Thesis committee Promotor Prof. Dr D. de Ridder Professor of Bioinformatics Wageningen University & Research Co-promotor Dr J.P. Nap Professor of Life Sciences & Renewable Energy Hanze University of Applied Sciences Groningen Other members Prof. Dr B. Tekinerdogan, Wageningen University & Research Prof. Dr R.C.H.J. van Ham, Delft University of Technology & KeyGene N.V., Wageningen Dr P. Prins, University of Tennessee, USA Prof. Dr R.V. van Nieuwpoort, Netherlands eScience Center, Amsterdam Application of high performance compute technology in bioinformatics Sven Warris Thesis submitted in fulfilment of the requirements for the degree of doctor at Wageningen University by the authority of the Rector Magnificus Prof. Dr A.P.J. Mol in the presence of the Thesis Committee appointed by the Academic Board to be defended in public on Tuesday 22 October 2019 at 4:00 p.m. in the Aula Sven Warris Application of high performance compute technology in bioinformatics, 159 pages. PhD thesis, Wageningen University, Wageningen, the Netherlands (2019) With references, with summaries in English and Dutch ISBN: 978-94-6395-112-8 DOI: https://doi.org/10.18174/499180 Table of contents 1 Introduction 9 2 Fast selection of miRNA candidates based on large- scale pre-computed MFE sets of randomized sequences 27 3 Flexible, fast and accurate sequence alignment profiling on GPGPU with PaSWAS 47 4 pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment 67 5 Correcting palindromes in long reads after whole- genome amplification 81 6 Mining functional annotations across species 103 7 General discussion 125 Summary 141 Samenvatting 145 Acknowledgements 149 Curriculum vitae 153 List of publications 155 Propositions 159 7 1 Introduction 9 Advances in DNA sequencing technology In recent years, technological developments in the life sciences have progressed enormously. -
CITOGENÉTICA MOLECULAR DA VARIEDADE BRS PÉROLA BRANCA (Arachis Hypogaea L.) E DE SEUS GENITORES
VANESSA EMANUELLE DE OLIVEIRA MACIEL CITOGENÉTICA MOLECULAR DA VARIEDADE BRS PÉROLA BRANCA (Arachis hypogaea L.) E DE SEUS GENITORES RECIFE 2014 VANESSA EMANUELLE DE OLIVEIRA MACIEL CITOGENÉTICA MOLECULAR DA VARIEDADE BRS PÉROLA BRANCA (Arachis hypogaea L.) E DE SEUS GENITORES Dissertação apresentada ao Programa de Pós-Graduação em Agronomia– Melhoramento Genético de Plantas (PPGAMGP) da Universidade Federal Rural de Pernambuco, como parte dos requisitos para obtenção do título de mestre. Orientador: Prof. Dr. Reginaldo De Carvalho Co-Orientadoras: Dra. Roseane Cavalcanti dos Santos Dra. Lidiane de Lima Feitoza RECIFE 2014 MACIEL, V.E.O. Citogenética molecular da variedade BRS Pérola Branca (Arachis hypogaea L.)... i VANESSA EMANUELLE DE OLIVEIRA MACIEL CITOGENÉTICA MOLECULAR DA VARIEDADE BRS PÉROLA BRANCA (Arachis hypogaea L.) E DE SEUS GENITORES Dissertação apresentada ao Programa de Pós-Graduação em Agronomia–Melhoramento Genético de Plantas (PPGAMGP) da Universidade Federal Rural de Pernambuco, como parte dos requisitos para obtenção do título de mestre em Melhoramento Genético de Plantas. Dissertação defendida e aprovada pela banca examinadora em: 28/07/2014. ORIENTADOR: Dr. Reginaldo de Carvalho Departamento de Biologia/UFRPE EXAMINADORES: Dr. Edson Ferreira da Silva Departamento de Biologia/UFRPE Dra. Maria Rita Cabral Sales de Melo MACIEL, V.E.O. Citogenética molecular da variedade BRS Pérola Branca (Arachis hypogaea L.)... ii Dedico a minha amada avó, Maria da Glória Rodrigues (In memoriam). MACIEL, V.E.O. Citogenética molecular da variedade BRS Pérola Branca (Arachis hypogaea L.)... iii AGRADECIMENTOS Primeiramente, a Deus por me proporcionar a conclusão de mais uma etapa em minha formação profissional. Aos meus pais, Ivônia Rodrigues de Oliveira e Manoel José Alves Maciel e, a minha querida avó, Maria da Glória Rodrigues (In memoriam), que são os meus pilares, por todo incentivo e ensinamento de valores fundamentais para a minha vida. -
Arachis Paraguariensis Scientific Name Arachis Paraguariensis Chodat & Hassl
Tropical Forages Arachis paraguariensis Scientific name Arachis paraguariensis Chodat & Hassl. Subordinate taxa: Subsp. paraguariensis: villous petiole Long-lived perennial herb with and rachis; leaflets with glabrous to Arachis paraguariensis Chodat & Hassl. subsp. numerous branches rising from the low sub-glabrous upper surface and loose Krapov. & W.C. Greg. crown (CQ 1780) silky hairs on the lower surface capibarensis (CQ1780) Arachis paraguariensis Chodat & Hassl. subsp. paraguariensis Synonyms None listed in GRIN. Krapovickas and Gregory (2007) list A. prostrata Benth. var. intermedia Chodat & Hassl. and A. Diogoi Hoehne forma submarginata Hoehne. Subsp. capibarensis: glabrous upper Fruit with single kernel surface of leaflet, and margins less conspicuously ciliate or hairy (CPI Family/tribe 91419) Family: Fabaceae (alt. Leguminosae) subfamily: Faboideae tribe: Dalbergieae section: Erectoides. Morphological description A long-lived perennial, with a deep, thick, somewhat fusiform taproot, to 12 mm in diameter, with thick, uniformly tapering branch roots. Multiple, ascendant stems and deep, subsp. paraguariensis: Main stem ±erect, 20‒85 cm thick, somewhat fusiform taproot (CQ 1780) tall; lateral branches ascendant/decumbent, internodes Fruit and kernel angular, to 7 cm long, short toward the apex of the branches, glabrous to villous, or with long silky hairs on the angles. Leaves tetrafoliolate with leaflets in pairs; stipule with surfaces pubescent to sub-glabrous, long silky hairs on the margins, sometimes with bristles on the fused -
Characterization of the Arachis (Leguminosae) D Genome Using Fluorescence in Situ Hybridization (FISH) Chromosome Markers and Total Genome DNA Hybridization
Genetics and Molecular Biology, 31, 3, 717-724 (2008) Copyright © 2008, Sociedade Brasileira de Genética. Printed in Brazil www.sbg.org.br Research Article Characterization of the Arachis (Leguminosae) D genome using fluorescence in situ hybridization (FISH) chromosome markers and total genome DNA hybridization Germán Robledo1 and Guillermo Seijo1,2 1Instituto de Botánica del Nordeste, Corrientes, Argentina. 2Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste, Corrientes, Argentina. Abstract Chromosome markers were developed for Arachis glandulifera using fluorescence in situ hybridization (FISH) of the 5S and 45S rRNA genes and heterochromatic 4’-6-diamidino-2-phenylindole (DAPI) positive bands. We used chro- mosome landmarks identified by these markers to construct the first Arachis species ideogram in which all the ho- mologous chromosomes were precisely identified. The comparison of this ideogram with those published for other Arachis species revealed very poor homeologies with all A and B genome taxa, supporting the special genome con- stitution (D genome) of A. glandulifera. Genomic affinities were further investigated by dot blot hybridization of biotinylated A. glandulifera total DNA to DNA from several Arachis species, the results indicating that the D genome is positioned between the A and B genomes. Key words: chromosome markers, DAPI bands, rDNA loci, dot blot hybridization, genome relationships. Received: June 29, 2007; Accepted: November 22, 2007. Introduction row et al., 2001; Simpson, 2001; Mallikarjuna, 2002; Mal- The genus Arachis comprises 80 wild species and the likarjuna et al., 2004). For this reason, great efforts have cultivated crop Arachis hypogaea L. (Fabales, Legumi- been directed towards understanding the relationships be- nosae) commonly known as groundnut or peanut. -
Simple Approach for Species Discrimination of Fabaceae Family on the Basis of Length Variation in PCR Amplified Products Using Barcode Primers
Int.J.Curr.Microbiol.App.Sci (2018) 7(12): 921-928 International Journal of Current Microbiology and Applied Sciences ISSN: 2319-7706 Volume 7 Number 12 (2018) Journal homepage: http://www.ijcmas.com Original Research Article https://doi.org/10.20546/ijcmas.2018.712.115 Simple Approach for Species Discrimination of Fabaceae Family on the Basis of Length Variation in PCR Amplified Products Using Barcode Primers Sumana Sikdar1*, Sharad Tiwari2, Swapnil Sapre1 and Vishwa Vijay Thakur3 1Biotechnology Centre, Jawaharlal Nehru Agricultural University, Jabalpur 482004, India 2Department of Plant breeding and Genetics, College of Agriculture, Jawaharlal Nehru Agricultural University, Jabalpur 482004, India 3ICAR-IINRG, Namkum Ranchi- 834010, India *Corresponding author ABSTRACT Fabaceae is one of the most diversified and complex family of flowering plants. The important pulses and the medicinally important plant species under this family have a high market value. Now a day, adulteration in the food and herbal medicinal products has become a severe problem. Adulteration of therapeutic herbs and major pulses with related K e yw or ds or conflicting species has proved to be hazardous to human health in several cases. We Barcode primers, have projected here, a PCR-based method using some of the major universal DNA barcode PCR, Agarose gel primers from the plastid region to address this problem. The basic idea behind this study electrophoresis, was to utilize the amplicon length polymorphisms exhibited by these primers to Adulteration, differentiate the plant species. PCR amplification success and species discrimination Fabaceae ability of five major DNA barcode primers (trnH-psbA, trnL, atpF-atpH, matK and rbcL) Article Info was studied among 24 representative plant species of Fabaceae family.