Guidelines for Inventorying and Monitoring of Dark Habitats
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Identity Crisis Or Split Personality? Trans-Ocean Distances and Not Within Individual Regions
Journal of Biogeography (J. Biogeogr.) (2007) 34, 2001–2008 GUEST Seamounts: identity crisis or split EDITORIAL personality? Craig R. McClain* Monterey Bay Aquarium Research Institute, ABSTRACT 7700 Sandholdt Road, Moss Landing, CA At present, researchers propose that over 14,000 seamounts exist and, like their 95039, USA terrestrial analogues, function like islands. In addition, seamounts are described as oases, biodiversity hotspots, and lush coral/sponge gardens. Here I discuss the extent to which these tenets regarding seamounts may be inappropriate, suffer from a lack of support, and be over-generalizations of a broad range of envi- ronmental types encountered on seamounts. Ultimately, for seamount science to progress, we need to challenge our conventional wisdom on these habitats and the extent to which all seamounts function in a similar manner. *Correspondence: Craig R. McClain, Monterey Bay Aquarium Research Institute, 7700 Keywords Sandholdt Road, Moss Landing, CA, 95039, USA. Biodiversity, conservation, coral, deep sea, ecological oasis, endemism, hotspot, E-mail: [email protected] island biogeography, isolation, seamount. biological communities that support highly unique and INTRODUCTION endemic faunas’. In ‘Toward a strategy for high seas marine There is no such things as mountains and valleys on the deep-sea protected areas’, Gjerde & Breide (2003) notes that ‘Sea- bottom. mounts are areas of high endemic biodiversity with little Mosely (1880), p. 343 overlap in community composition between seamount Less than 100 years after Mosely’s statement, Hubbs (1959) clusters’. contemplated the ‘scientific interests, particularly in respect Alternatively, others suggest that seamounts are unique to zoogeography and speciation’ of recently discovered habitats for reasons not related to their ‘islandness’. -
Morphological Investigations of Selected Echinoids
Morphological investigations of selected echinoids Katja Jaszkowiak; [email protected] Sascha Hentschel; [email protected] Abstract Echinoids have a radial pattern that is formed by sceletal plates which are fused to each other and form rows that run from the oral to the aboral surface. These plates can be divided into ambulacral and interambulacral plates. The ambulacral plates are perforated and therefore allow the ambulacral system within the animal a connection with its surrounding. Another important aspect of echinoid morphology is the digestive tract that is situated in a special way within the animal and can be used as a phylogenetic marker showing an additi- onal caecum in some echinoid groups (Ziegler et al., 2010). We also investigated the gonads as they where situated in different positions within the investigated species and also show a different morphology. There are numerous different studies into echinoid biology but many of them focus on very specialized aspects. By investigating three different species belonging to two different echinoid groups (Gracilechinus acutus (Lamarck, 1816), Echinus esculentus (Linnaeus, 1758) - Echinidae (Echinodermata – Echinoidea – Carin- acea ); Brissopsis lyrifera (Forbes, 1841) - (Echinodermata – Echinoidea – Irregularia)) we tried to give a Einleitung Die Echinoidea verfuegen häufig ueber einen ebenfalls sehr komplex und kann fuer phylogene- speziellen radiärsymmetrischen Aufbau. Hierbei tische Studien verwendet werden (Ziegler et al., liegen miteinander verbundene Skelettplatten in 2010). Der After befindet sich bei vielen Arten Form von Reihen, welche von oral nach aboral gegenueber des Mundes auf der Aboralseite des verlaufen, nebeneinander und bilden ein meist Tieres. Um ihn herum sind verschiedene spezielle annähernd globuläres Innenskelett. Diese Platten Platten angeordnet, welche Poren zur Abgabe von lassen sich in Ambulakralplatten und Interabu- Sperma bzw. -
<I>Argyrotheca Bermudana</I>
BULLETIN OF MARINE SCIENCE, 25(2): 186-204,1975 ECOLOGICAL OBSERVATIONS ON THE RECENT ARTICULATE BRACHIOPOD ARGYROTHECA BERMUDANA DALL FROM THE BERMUDA PLATFORM Alan Logan ABSTRACT The occurrence and life habits of Ihe diminutive articulate brachiopod Argyro/Izeca bermu- dalla have been investigated along a general NW-SE traverse across the Bermuda Platform, in- corporating all seven biotopes recognized by Upchurch (1970). Sediment samples indicate that brachiopod tests comprise a consistent though minor « 1%) fraction in reefal shoal sediments, but are totally absent from lagoonal sediments. Preliminary transects reveal that in the reef-front terrace, north reef and central and south reef biotopes, A. bermudalla is cryptic in habit, occurring on the undersides of the foliaceous hermatypic corals MOil/as/rea cavernosa (L.), M. annularis (Ellis and Solander), and Agaricia fragilis Dana. The main host coral for brachiopods on the south shore reefs and associated reef-front terrace is M. cavemosa, on the north reef-front terrace, north and central reefs it is M. anllularis, while A. fragilis is more important on the lagoonal and near-shore reefs. Brachiopod densities generally decrease shorewards from the edge of the Platform. The distribution and density of brachiopods appears to be controlled primarily by the relative abundance of the host corals and their growth form, although other limiting factors may be at work. Clumped distributions are common, probably the result of brooded larvae and in- tense competition for living space. Inter-island areas such as Castle Harbor and Harrington Sound are virtually devoid of brachiopods, although a relict population exists marginally in an unusual sub-boulder habitat in land-locked Walsingham Pond. -
Calcium Carbonate Biomineralisation in Disparate Systems - Common Mechanisms?
England, Jennifer Katherine (2005) Calcium carbonate biomineralisation in disparate systems - common mechanisms? PhD thesis http://theses.gla.ac.uk/4024/ Copyright and moral rights for this thesis are retained by the author A copy can be downloaded for personal non-commercial research or study, without prior permission or charge This thesis cannot be reproduced or quoted extensively from without first obtaining permission in writing from the Author The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the Author When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given Glasgow Theses Service http://theses.gla.ac.uk/ [email protected] Calcium Carbonate Biomineralisation in Disparate Systems - Common Mechanisms? Jennifer Katherine England A thesis submitted for the degree of Doctor of Philosophy Division of Earth Sciences, Centre for Geosciences, University of Glasgow March 2005 © Jennifer England 2005 Abstract Biominerals are composite materials in which orgaruc components control mineral nucleation and structure. Calcium minerals account for over 50% of biominerals, with calcium carbonate being the most common type. This study considers the extent to which four calcium carbonate biomineral systems share common characteristics. Within the sample set, there is a range of ultrastructures and two types of calcium carbonate polymorph (calcite and aragonite). The mini survey includes three invertebrate systems: two members of the Phylum Brachiopoda; the articulated brachiopod Terebratulina retusa (Subphylum Rhynchonelliformea) and the inarticulated brachiopod Novocrania anomala (Subphylum Craniiformea), and a member of the. Mollusca, the bivalve Mytilus edulis. -
A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution
marine drugs Review A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution Adrian Galitz 1 , Yoichi Nakao 2 , Peter J. Schupp 3,4 , Gert Wörheide 1,5,6 and Dirk Erpenbeck 1,5,* 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany; [email protected] (A.G.); [email protected] (G.W.) 2 Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku-ku, Tokyo 169-8555, Japan; [email protected] 3 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, 26111 Wilhelmshaven, Germany; [email protected] 4 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg (HIFMB), 26129 Oldenburg, Germany 5 GeoBio-Center, Ludwig-Maximilians-Universität München, 80333 Munich, Germany 6 SNSB-Bavarian State Collection of Palaeontology and Geology, 80333 Munich, Germany * Correspondence: [email protected] Abstract: Marine sponges are the most prolific marine sources for discovery of novel bioactive compounds. Sponge secondary metabolites are sought-after for their potential in pharmaceutical applications, and in the past, they were also used as taxonomic markers alongside the difficult and homoplasy-prone sponge morphology for species delineation (chemotaxonomy). The understanding Citation: Galitz, A.; Nakao, Y.; of phylogenetic distribution and distinctiveness of metabolites to sponge lineages is pivotal to reveal Schupp, P.J.; Wörheide, G.; pathways and evolution of compound production in sponges. This benefits the discovery rate and Erpenbeck, D. A Soft Spot for yield of bioprospecting for novel marine natural products by identifying lineages with high potential Chemistry–Current Taxonomic and Evolutionary Implications of Sponge of being new sources of valuable sponge compounds. -
Proposal for a Revised Classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3*
Morrow and Cárdenas Frontiers in Zoology (2015) 12:7 DOI 10.1186/s12983-015-0099-8 DEBATE Open Access Proposal for a revised classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3* Abstract Background: Demospongiae is the largest sponge class including 81% of all living sponges with nearly 7,000 species worldwide. Systema Porifera (2002) was the result of a large international collaboration to update the Demospongiae higher taxa classification, essentially based on morphological data. Since then, an increasing number of molecular phylogenetic studies have considerably shaken this taxonomic framework, with numerous polyphyletic groups revealed or confirmed and new clades discovered. And yet, despite a few taxonomical changes, the overall framework of the Systema Porifera classification still stands and is used as it is by the scientific community. This has led to a widening phylogeny/classification gap which creates biases and inconsistencies for the many end-users of this classification and ultimately impedes our understanding of today’s marine ecosystems and evolutionary processes. In an attempt to bridge this phylogeny/classification gap, we propose to officially revise the higher taxa Demospongiae classification. Discussion: We propose a revision of the Demospongiae higher taxa classification, essentially based on molecular data of the last ten years. We recommend the use of three subclasses: Verongimorpha, Keratosa and Heteroscleromorpha. We retain seven (Agelasida, Chondrosiida, Dendroceratida, Dictyoceratida, Haplosclerida, Poecilosclerida, Verongiida) of the 13 orders from Systema Porifera. We recommend the abandonment of five order names (Hadromerida, Halichondrida, Halisarcida, lithistids, Verticillitida) and resurrect or upgrade six order names (Axinellida, Merliida, Spongillida, Sphaerocladina, Suberitida, Tetractinellida). Finally, we create seven new orders (Bubarida, Desmacellida, Polymastiida, Scopalinida, Clionaida, Tethyida, Trachycladida). -
1471-2148-9-187.Pdf
BMC Evolutionary Biology BioMed Central Research article Open Access An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models Georgia Tsagkogeorga1,2, Xavier Turon3, Russell R Hopcroft4, Marie- Ka Tilak1,2, Tamar Feldstein5, Noa Shenkar5,6, Yossi Loya5, Dorothée Huchon5, Emmanuel JP Douzery1,2 and Frédéric Delsuc*1,2 Address: 1Université Montpellier 2, Institut des Sciences de l'Evolution (UMR 5554), CC064, Place Eugène Bataillon, 34095 Montpellier Cedex 05, France, 2CNRS, Institut des Sciences de l'Evolution (UMR 5554), CC064, Place Eugène Bataillon, 34095 Montpellier Cedex 05, France, 3Centre d'Estudis Avançats de Blanes (CEAB, CSIC), Accés Cala S. Francesc 14, 17300 Blanes (Girona), Spain, 4Institute of Marine Science, University of Alaska Fairbanks, Fairbanks, Alaska, USA, 5Department of Zoology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, 69978, Israel and 6Department of Biology, University of Washington, Seattle WA 98195, USA Email: Georgia Tsagkogeorga - [email protected]; Xavier Turon - [email protected]; Russell R Hopcroft - [email protected]; Marie-Ka Tilak - [email protected]; Tamar Feldstein - [email protected]; Noa Shenkar - [email protected]; Yossi Loya - [email protected]; Dorothée Huchon - [email protected]; Emmanuel JP Douzery - [email protected]; Frédéric Delsuc* - [email protected] * Corresponding author Published: 5 August 2009 Received: 16 October 2008 Accepted: 5 August 2009 BMC Evolutionary Biology 2009, 9:187 doi:10.1186/1471-2148-9-187 This article is available from: http://www.biomedcentral.com/1471-2148/9/187 © 2009 Tsagkogeorga et al; licensee BioMed Central Ltd. -
United Nations Unep/Med Wg.474/3 United
UNITED NATIONS UNEP/MED WG.474/3 UNITED NATIONS ENVIRONMENT PROGRAMME MEDITERRANEAN ACTION PLAN 24 Avril 2019 Original: English Meeting of the Ecosystem Approach of Correspondence Group on Monitoring (CORMON), Biodiversity and Fisheries. Rome, Italy, 12-13 May 2019 Agenda item 3: Guidance on monitoring marine benthic habitats (Common Indicators 1 and 2) Monitoring protocols of the Ecosystem Approach Common Indicators 1 and 2 related to marine benthic habitats For environmental and economy reasons, this document is printed in a limited number and will not be distributed at the meeting. Delegates are kindly requested to bring their copies to meetings and not to request additional copies. UNEP/MAP SPA/RAC - Tunis, 2019 Note by the Secretariat The 19th Meeting of the Contracting Parties to the Barcelona Convention (COP 19) agreed on the Integrated Monitoring and Assessment Programme (IMAP) of the Mediterranean Sea and Coast and Related Assessment Criteria which set, in its Decision IG.22/7, a specific list of 27 common indicators (CIs) and Good Environmental Status (GES) targets and principles of an integrated Mediterranean Monitoring and Assessment Programme. During the initial phase of the IMAP implementation (2016-2019), the Contracting parties to the Barcelona Convention updated the existing national monitoring and assessment programmes following the Decision requirements in order to provide all the data needed to assess whether ‘‘Good Environmental Status’’ defined through the Ecosystem Approach process has been achieved or maintained. In line with IMAP, Guidance Factsheets were developed, reviewed and agreed by the Meeting of the Ecosystem Approach Correspondence Group on Monitoring (CORMON) Biodiversity and Fisheries (Madrid, Spain, 28 February-1 March 2017) and the Meeting of the SPA/RAC Focal Points (Alexandria, Egypt, 9-12 May 2017) for the Common Indicators to ensure coherent monitoring. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
The Present-Day Mediterranean Brachiopod Fauna: Diversity, Life Habits, Biogeography and Paleobiogeography*
SCI. MAR., 68 (Suppl. 1): 163-170 SCIENTIA MARINA 2004 BIOLOGICAL OCEANOGRAPHY AT THE TURN OF THE MILLENIUM. J.D. ROS, T.T. PACKARD, J.M. GILI, J.L. PRETUS and D. BLASCO (eds.) The present-day Mediterranean brachiopod fauna: diversity, life habits, biogeography and paleobiogeography* A. LOGAN1, C.N. BIANCHI2, C. MORRI2 and H. ZIBROWIUS3 1 Centre for Coastal Studies and Aquaculture, University of New Brunswick, Saint John, N.B. E2L 4L5, Canada. E-mail: [email protected] 2 DipTeRis (Dipartimento Territorio e Risorse), Università di Genova, Corso Europa 26, I-16132 Genoa, Italy. 3 Centre d’Océanologie de Marseille, Station Marine d’Endoume, Rue Batterie des Lions, 13007 Marseilles, France. SUMMARY: The present-day brachiopods from the Mediterranean Sea were thoroughly described by nineteenth-century workers, to the extent that Logan’s revision in 1979 listed the same 11 species as Davidson, almost 100 years earlier. Since then recent discoveries, mainly from cave habitats inaccessible to early workers, have increased the number of species to 14. The validity of additional forms, which are either contentious or based on scanty evidence, is evaluated here. Preferred substrates and approximate bio-depth zones of all species are given and their usefulness for paleoecological reconstruction is discussed. A previous dearth of material from the eastern Mediterranean has now been at least partially remedied by new records from the coasts of Cyprus, Israel, Egypt, and, in particular, Lebanon and the southern Aegean Sea. While 11 species (79 % of the whole fauna) have now been recorded from the eastern basin, Terebratulina retusa, Argyrotheca cistellula, Megathiris detruncata and Platidia spp. -
Supplementary Materials: Patterns of Sponge Biodiversity in the Pilbara, Northwestern Australia
Diversity 2016, 8, 21; doi:10.3390/d8040021 S1 of S3 9 Supplementary Materials: Patterns of Sponge Biodiversity in the Pilbara, Northwestern Australia Jane Fromont, Muhammad Azmi Abdul Wahab, Oliver Gomez, Merrick Ekins, Monique Grol and John Norman Ashby Hooper 1. Materials and Methods 1.1. Collation of Sponge Occurrence Data Data of sponge occurrences were collated from databases of the Western Australian Museum (WAM) and Atlas of Living Australia (ALA) [1]. Pilbara sponge data on ALA had been captured in a northern Australian sponge report [2], but with the WAM data, provides a far more comprehensive dataset, in both geographic and taxonomic composition of sponges. Quality control procedures were undertaken to remove obvious duplicate records and those with insufficient or ambiguous species data. Due to differing naming conventions of OTUs by institutions contributing to the two databases and the lack of resources for physical comparison of all OTU specimens, a maximum error of ± 13.5% total species counts was determined for the dataset, to account for potentially unique (differently named OTUs are unique) or overlapping OTUs (differently named OTUs are the same) (157 potential instances identified out of 1164 total OTUs). The amalgamation of these two databases produced a complete occurrence dataset (presence/absence) of all currently described sponge species and OTUs from the region (see Table S1). The dataset follows the new taxonomic classification proposed by [3] and implemented by [4]. The latter source was used to confirm present validities and taxon authorities for known species names. The dataset consists of records identified as (1) described (Linnean) species, (2) records with “cf.” in front of species names which indicates the specimens have some characters of a described species but also differences, which require comparisons with type material, and (3) records as “operational taxonomy units” (OTUs) which are considered to be unique species although further assessments are required to establish their taxonomic status. -
Early Ontogeny of Jurassic Bakevelliids and Their Bearing on Bivalve Evolution
Early ontogeny of Jurassic bakevelliids and their bearing on bivalve evolution NIKOLAUS MALCHUS Malchus, N. 2004. Early ontogeny of Jurassic bakevelliids and their bearing on bivalve evolution. Acta Palaeontologica Polonica 49 (1): 85–110. Larval and earliest postlarval shells of Jurassic Bakevelliidae are described for the first time and some complementary data are given concerning larval shells of oysters and pinnids. Two new larval shell characters, a posterodorsal outlet and shell septum are described. The outlet is homologous to the posterodorsal notch of oysters and posterodorsal ridge of arcoids. It probably reflects the presence of the soft anatomical character post−anal tuft, which, among Pteriomorphia, was only known from oysters. A shell septum was so far only known from Cassianellidae, Lithiotidae, and the bakevelliid Kobayashites. A review of early ontogenetic shell characters strongly suggests a basal dichotomy within the Pterio− morphia separating taxa with opisthogyrate larval shells, such as most (or all?) Praecardioida, Pinnoida, Pterioida (Bakevelliidae, Cassianellidae, all living Pterioidea), and Ostreoida from all other groups. The Pinnidae appear to be closely related to the Pterioida, and the Bakevelliidae belong to the stem line of the Cassianellidae, Lithiotidae, Pterioidea, and Ostreoidea. The latter two superfamilies comprise a well constrained clade. These interpretations are con− sistent with recent phylogenetic hypotheses based on palaeontological and genetic (18S and 28S mtDNA) data. A more detailed phylogeny is hampered by the fact that many larval shell characters are rather ancient plesiomorphies. Key words: Bivalvia, Pteriomorphia, Bakevelliidae, larval shell, ontogeny, phylogeny. Nikolaus Malchus [[email protected]], Departamento de Geologia/Unitat Paleontologia, Universitat Autòno− ma Barcelona, 08193 Bellaterra (Cerdanyola del Vallès), Spain.