Odorrana Margaretae)
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Amphibia-Reptilia 38 (2017): 483-502 Resurrection of genus Nidirana (Anura: Ranidae) and synonymizing N. caldwelli with N. adenopleura, with description of a new species from China Zhi-Tong Lyu, Zhao-Chi Zeng, Jian Wang, Chao-Yu Lin, Zu-Yao Liu, Ying-Yong Wang∗ Abstract. The taxonomy of Babina sensu lato was controversial in the past decades. In this study, the phylogeny of genus Babina sensu lato was re-constructed based on genetic analysis, morphological comparison and advertisement call analysis. We found that Babina sensu stricto and previous subgenus Nidirana should be two distinct genera in the family Ranidae. N. caldwelli is confirmed to be a synonym of N. adenopleura because of the small genetic divergence and the lack of distinct morphological differences. A new species, Nidirana nankunensis sp. nov. is described based on a series of specimens collected from Mt. Nankun, Guangdong Province, China, which can be distinguished from other known congeners by having a behavior of nest construction, distinctive advertisement calls, significant divergence in the mitochondrial genes, and a combination of morphological characters. Currently, the genus Babina contains two species and the genus Nidirana contains eight species. Keywords: Babina, bioacoustic, mitochondrial DNA, morphology, Nidirana nankunensis sp. nov., phylogeny. Introduction folds (Dubois, 1992). Subsequently, Nidirana was recognized as a separate genus by Chen The ranid genus Babina was established and de- et al. (2005), based on a molecular phyloge- scribed on the basis of Rana holsti Boulenger, netic tree of Southeast Asian ranids that only 1892 (type species) and Rana subaspera Bar- included one Nidirana species – R. (N.) cha- bour, 1908 by Thompson (1912). -
Phylogenetic Relationship Among Hylidae and Mitochondrial Protein-Coding Gene Expression in Response to Freezing and Ano
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/332083499 The complete mitochondrial genome of Dryophytes versicolor: Phylogenetic relationship among Hylidae and mitochondrial protein-coding gene expression in response to freezing and ano... Article in International Journal of Biological Macromolecules · March 2019 DOI: 10.1016/j.ijbiomac.2019.03.220 CITATIONS READS 5 209 6 authors, including: Jia-Yong Zhang Bryan E Luu Zhejiang Normal University McGill University 88 PUBLICATIONS 696 CITATIONS 29 PUBLICATIONS 193 CITATIONS SEE PROFILE SEE PROFILE Danna Yu Leping Zhang Zhejiang Normal University Westlake University 57 PUBLICATIONS 255 CITATIONS 18 PUBLICATIONS 104 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Hibernation Metabolomics View project New project: 1)The frog mitochondrial genome project: evolution of frog mitochondrial genomes and their gene expression View project All content following this page was uploaded by Jia-Yong Zhang on 08 April 2019. The user has requested enhancement of the downloaded file. International Journal of Biological Macromolecules 132 (2019) 461–469 Contents lists available at ScienceDirect International Journal of Biological Macromolecules journal homepage: http://www.elsevier.com/locate/ijbiomac The complete mitochondrial genome of Dryophytes versicolor: Phylogenetic relationship among Hylidae and mitochondrial protein-coding gene expression in response to freezing and -
A Biogeographic Synthesis of the Amphibians and Reptiles of Indochina
BAIN & HURLEY: AMPHIBIANS OF INDOCHINA & REPTILES & HURLEY: BAIN Scientific Publications of the American Museum of Natural History American Museum Novitates A BIOGEOGRAPHIC SYNTHESIS OF THE Bulletin of the American Museum of Natural History Anthropological Papers of the American Museum of Natural History AMPHIBIANS AND REPTILES OF INDOCHINA Publications Committee Robert S. Voss, Chair Board of Editors Jin Meng, Paleontology Lorenzo Prendini, Invertebrate Zoology RAOUL H. BAIN AND MARTHA M. HURLEY Robert S. Voss, Vertebrate Zoology Peter M. Whiteley, Anthropology Managing Editor Mary Knight Submission procedures can be found at http://research.amnh.org/scipubs All issues of Novitates and Bulletin are available on the web from http://digitallibrary.amnh.org/dspace Order printed copies from http://www.amnhshop.com or via standard mail from: American Museum of Natural History—Scientific Publications Central Park West at 79th Street New York, NY 10024 This paper meets the requirements of ANSI/NISO Z39.48-1992 (permanence of paper). AMNH 360 BULLETIN 2011 On the cover: Leptolalax sungi from Van Ban District, in northwestern Vietnam. Photo by Raoul H. Bain. BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY A BIOGEOGRAPHIC SYNTHESIS OF THE AMPHIBIANS AND REPTILES OF INDOCHINA RAOUL H. BAIN Division of Vertebrate Zoology (Herpetology) and Center for Biodiversity and Conservation, American Museum of Natural History Life Sciences Section Canadian Museum of Nature, Ottawa, ON Canada MARTHA M. HURLEY Center for Biodiversity and Conservation, American Museum of Natural History Global Wildlife Conservation, Austin, TX BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY Number 360, 138 pp., 9 figures, 13 tables Issued November 23, 2011 Copyright E American Museum of Natural History 2011 ISSN 0003-0090 CONTENTS Abstract......................................................... -
Species Groups Distributed Across Elevational Gradients Reveal Convergent and Continuous Genetic Adaptation to High Elevations
Species groups distributed across elevational gradients reveal convergent and continuous genetic adaptation to high elevations Yan-Bo Suna,1, Ting-Ting Fua,b,1, Jie-Qiong Jina, Robert W. Murphya,c, David M. Hillisd,2, Ya-Ping Zhanga,e,f,2, and Jing Chea,e,g,2 aState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, 650223 Kunming, China; bKunming College of Life Science, University of Chinese Academy of Sciences, 650204 Kunming, China; cCentre for Biodiversity and Conservation Biology, Royal Ontario Museum, Toronto, ON M5S 2C6, Canada; dDepartment of Integrative Biology and Biodiversity Center, University of Texas at Austin, Austin, TX 78712; eCenter for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, 650223 Kunming, China; fState Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, 650091 Kunming, China; and gSoutheast Asia Biodiversity Research Institute, Chinese Academy of Sciences, Yezin, 05282 Nay Pyi Taw, Myanmar Contributed by David M. Hillis, September 7, 2018 (sent for review August 7, 2018; reviewed by John H. Malone and Fuwen Wei) Although many cases of genetic adaptations to high elevations Most previous studies of the genetic processes of HEA have have been reported, the processes driving these modifications and compared species or populations from high elevations above the pace of their evolution remain unclear. Many high-elevation 3,500 m with those from low elevations to identify sequence adaptations (HEAs) are thought to have arisen in situ as popula- variation and/or expression shifts in the high-elevation group (8– tions rose with growing mountains. -
Climatic Niche Measures and Extinction Risks of Amphibians In
Australian Systematic Botany, 2017, 30, 414–421 ©CSIRO 2017 doi:10.1071/SB17001_AC Supplemental material Correlates of ecological-niche diversity and extinction risk of amphibians in China under climate change Youhua ChenA,C,D and Tania EscalanteB AChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610000, P.R. China. BGrupo de Biogeografía de la Conservación, Departamento de Biología Evolutiva, Facultad de Ciencias, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Coyoacán, CP 04510, México. CDepartment of Renewable Resources, University of Alberta, Edmonton, AB, T6G 2H1, Canada. DCorresponding author. Email: [email protected] Page 1 of 12 Australian Systematic Botany ©CSIRO 2017 doi:10.1071/SB17001_AC Table S1. Correlations of different niche diversity metrics and the significance of the correlations Upper triangular matrix collects the correlation values, whereas the lower triangular matrix collects the P-values of the correlations. NC, niche connectivity; TNC, trend of NC; NB, niche breadth; TNB, trend of NB; NP, niche position; TNP, trend of NP; NA, niche amount; TNA, trend of NA; NCO, niche spatial correlation; TNCO, trend of NCO; NPA, niche packing; TNPA, trend of NPA; NFD, niche fractal dimension; TNFD, trend of NFD; NV, niche volume; and TNV, trend of NV NB NP NC NA NCO NPA NFD TNB TNP TNC TNA TNCO TNPA TNFD NB 1.000 0.515 0.263 0.088 0.335 –0.168 –0.071 –0.269 –0.056 –0.081 0.027 –0.086 0.095 –0.017 NP 0.000 1.000 0.003 –0.318 0.342 0.633 –0.423 –0.125 –0.134 –0.089 0.088 –0.151 -
Comparative Transcriptome Analyses of Seven Anurans Reveal Functions
www.nature.com/scientificreports OPEN Comparative transcriptome analyses of seven anurans reveal functions and adaptations of Received: 24 August 2015 Accepted: 18 March 2016 amphibian skin Published: 04 April 2016 Li Huang*, Jun Li*, Housseni Anboukaria, Zhenhua Luo, Mian Zhao & Hua Wu Animal skin, which is the tissue that directly contacts the external surroundings, has evolved diverse functions to adapt to various environments. Amphibians represent the transitional taxon from aquatic to terrestrial life. Exploring the molecular basis of their skin function and adaptation is important to understand the survival and evolutionary mechanisms of vertebrates. However, comprehensive studies on the molecular mechanisms of skin functions in amphibians are scarce. In this study, we sequenced the skin transcriptomes of seven anurans belonging to three families and compared the similarities and differences in expressed genes and proteins. Unigenes and pathways related to basic biological processes and special functions, such as defense, immunity, and respiration, were enriched in functional annotations. A total of 108 antimicrobial peptides were identified. The highly expressed genes were similar in species of the same family but were different among families. Additionally, the positively selected orthologous groups were involved in biosynthesis, metabolism, immunity, and defense processes. This study is the first to generate extensive transcriptome data for the skin of seven anurans and provides unigenes and pathway candidates for further studies on amphibian skin function and adaptation. The adaptation of organisms to their environments is the basis of evolutionary biology. This adaptation occurs at many levels of biological organization, from molecules to organs1. Animal skin, acting as the direct medium inter- acting with external surroundings, has experienced distinctly adaptive evolution. -
From Guizhou Province, China
A peer-reviewed open-access journal ZooKeys 904: 63–87 (2020) A new species of Nidirana 63 doi: 10.3897/zookeys.904.39161 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research A new species of the Music frog Nidirana (Anura, Ranidae) from Guizhou Province, China Gang Wei1*, Shi-Ze Li2,3*, Jing Liu3, Yan-Lin Cheng3, Ning Xu1, Bin Wang1,2 1 Biodiversity Conservation Key Laboratory, Guiyang College, Guiyang, 550002, China 2 CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conser- vation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China 3 Department of Food Science and Engineering, Moutai Institute, Renhuai 564500, China Corresponding author: Bin Wang ([email protected]) Academic editor: A. Crottini | Received 16 August 2019 | Accepted 29 November 2019 | Published 16 January 2020 http://zoobank.org/43BDAFC7-8D85-45A5-8B05-2CC5EAAEE048 Citation: Wei G, Li S-Z, Liu J, Cheng Y-L, Xu N, Wang B (2020) A new species of the Music frog Nidirana (Anura, Ranidae) from Guizhou Province, China. ZooKeys 904: 63–87. https://doi.org/10.3897/zookeys.904.39161 Abstract The Music frog genus Nidirana is widely distributed in East and South Asia. Here, a new species of the genus is described from southwestern China. Phylogenetic analyses based on the mitochondrial 16S rRNA and COI gene sequences supported the new species as a clade closely related to N. leishanensis, N. hainanensis, N. -
Complete Mitochondrial Genomes of Nanorana Taihangnica and N
Zhang et al. BMC Evolutionary Biology (2018) 18:26 https://doi.org/10.1186/s12862-018-1140-2 RESEARCH ARTICLE Open Access Complete mitochondrial genomes of Nanorana taihangnica and N. yunnanensis (Anura: Dicroglossidae) with novel gene arrangements and phylogenetic relationship of Dicroglossidae Jia-Yong Zhang1,2,3, Le-Ping Zhang2, Dan-Na Yu1,2* , Kenneth B. Storey3 and Rong-Quan Zheng4 Abstract Background: Complete mitochondrial (mt) genomes have been used extensively to test hypotheses about microevolution and to study population structure, phylogeography, and phylogenetic relationships of Anura at various taxonomic levels. Large-scale mt genomic reorganizations have been observed among many fork-tongued frogs (family Dicroglossidae). The relationships among Dicroglossidae and validation of the genus Feirana are still problematic. Hence, we sequenced the complete mt genomes of Nanorana taihangnica (=F. taihangnica)andN. yunnanensis as well as partial mt genomes of six Quasipaa species (dicroglossid taxa), two Odorrana and two Amolops species (Ranidae), and one Rhacophorus species (Rhacophoridae) in order to identify unknown mt gene rearrangements, to investigate the validity of the genus Feirana, and to test the phylogenetic relationship of Dicroglossidae. Results: In the mt genome of N. taihangnica two trnM genes, two trnP genes and two control regions were found. In addition, the trnA, trnN, trnC,andtrnQ genes were translocated from their typical positions. In the mt genome of N. yunnanensis, three control regions were found and eight genes (ND6, trnP, trnQ, trnA, trnN, trnC, trnY and trnS genes) in the L-stand were translocated from their typical position and grouped together. We also found intraspecific rearrangement of the mitochondrial genomes in N. -
Peptides for Skin Protection and Healing in Amphibians
Review Peptides for Skin Protection and Healing in Amphibians Ilaria Demori 1, Zeinab El Rashed 1, Viola Corradino 1, Annamaria Catalano 2, Leila Rovegno 1, Linda Queirolo 1, Sebastiano Salvidio 1, Emanuele Biggi 3, Matteo Zanotti-Russo 4, Laura Canesi 1, Alessandro Catenazzi 5 and Elena Grasselli 1,* 1 Dipartimento Scienze della Terra dell’Ambiente e della Vita –DISTAV, Università degli Studi di Genova – 16132 Genova, Italy; [email protected] (I.D.); [email protected] (Z.E.R.); [email protected] (V.C.); [email protected] (L.R.); [email protected] (L.Q.); [email protected] (S.S.); [email protected] (L.C.) 2 iDelivery iSrl, Via Eremo al Santuario n.75/A, 89124 Reggio Calabria, Italy; [email protected] 3 International League of Conservation Photographers, Arlington, VA 22203, USA; [email protected] 4 Angel Consulting via San Senatore 14, 20122 Milano, Italy; [email protected] 5 Department of Biological Sciences, Florida International University, Miami, FL 33199, USA; [email protected] or [email protected] * Correspondence: [email protected] Tel: +39-010-35338257 Received: 19 December 2018; Accepted: 17 January 2019; Published: 18 January 2019 Abstract: Amphibian skin is not to be considered a mere tegument; it has a multitude of functions related to respiration, osmoregulation, and thermoregulation, thus allowing the individuals to survive and thrive in the terrestrial environment. Moreover, amphibian skin secretions are enriched with several peptides, which defend the skin from environmental and pathogenic insults and exert many other biological effects. In this work, the beneficial effects of amphibian skin peptides are reviewed, in particular their role in speeding up wound healing and in protection from oxidative stress and UV irradiation. -
门、纲、目、科序号1 序号2 Chinese Name Latin Name Proposed
国家重点保护野生动物名录(报审稿) National Protected Species List Revision (Pending for Approval) 一、陆生野生动物部分 门、纲、目、科 Chinese Proposed Current 序号1 序号2 Latin Name IUCN category Note Name category category 脊索动物门 CHORDATA 脊椎动物亚门 VERTEBRATA 兽纲 MAMMALIA 灵长目 PRIMATES 懒猴科 Lorisidae 1 1 蜂猴 Nycticebus coucang Ⅰ Ⅰ 未列入 2 2 倭蜂猴 Nycticebus pygmaeus Ⅰ Ⅰ 易危 猴科 Cercopithecidae 3 3 猕猴 Macaca mulatta Ⅱ Ⅱ 低危/接近受危 4 4 熊猴 Macaca assamensis Ⅰ Ⅰ 易危 5 5 台湾猴 Macaca cyclopis Ⅰ Ⅰ 易危 6 6 豚尾猴 Macaca nemestrina Ⅱ Ⅰ 易危 downgraded 7 7 短尾猴 Macaca arctoides Ⅱ Ⅱ 易危 8 8 藏酋猴 Macaca thibetana Ⅱ Ⅱ 低危/保护依赖 9 9 达旺猴 Macaca munzula Ⅱ 种群状况不明 newly added Rhinopithecus 10 10 金丝猴 Ⅰ Ⅰ 易危 roxellanae 11 11 滇金丝猴 Rhinopithecus bieti Ⅰ Ⅰ 濒危 12 12 黔金丝猴 Rhinopithecus brelichi I I 濒危 13 13 白头叶猴 Presbytis leucocephalus I I 极危 14 14 长尾叶猴 Presbytis entellus Ⅰ Ⅰ 低危/接近受危 15 15 戴帽叶猴 Presbytis pileatus Ⅰ Ⅰ 濒危 16 16 菲氏叶猴 Presbytis phayrei Ⅰ Ⅰ 未列入 17 17 黑叶猴 Presbytis francoisi Ⅰ Ⅰ 易危 长臂猿科 Hylobatidae 白掌长臂 18 18 Hylobates lar Ⅰ Ⅰ 极危 猿 白眉长臂 19 19 Hylobates hoolock Ⅰ Ⅰ 濒危 猿 20 20 黑长臂猿 Hylobates concolor Ⅰ Ⅰ 濒危 海南长臂 21 21 Nomascus hainanus I Ⅰ 极危 猿 东黑冠长 22 22 Nomascus nasutus I Ⅰ 种群状况不明 臂猿 白颊长臂 23 23 Hylobates leucogenys Ⅰ Ⅰ 种群状况不明 猿 鳞甲目 PHOLIDOTA 鲮鲤科 Manidae 24 24 穿山甲 Manis pentadactyla Ⅰ Ⅱ 低危/接近受危 upgraded 73 门、纲、目、科 Chinese Proposed Current 序号1 序号2 Latin Name IUCN category Note Name category category 食肉目 CARNIVORA 犬科 Canidae 25 25 狼 Canis lupus Ⅱ 未列入 newly added 26 26 赤狐 Vulpes vulpes Ⅱ 未列入 newly added 27 27 沙狐 Vulpes corsac Ⅱ 种群状况不明 newly added 28 28 藏狐 Vulpes ferrilata Ⅱ 未列入 newly added 29 29 豺 Cuou alpinus Ⅱ Ⅱ 易危 -
中国生物多样性红色名录 Redlist of China's Biodiversity
中国生物多样性红色名录 Redlist of China’s Biodiversity 中国生物多样性红色名录·哺乳类 Redlist of China’s Biodiversity·Mammals ......................................................................................................................... 2 中国生物多样性红色名录·鸟类 Redlist of China’s Biodiversity·Birds .................................................................................................................................... 43 中国生物多样性红色名录·爬行类 Redlist of China’s Biodiversity·Reptiles ........................................................................................................................ 125 中国生物多样性红色名录·两栖类 Redlist of China’s Biodiversity·Amphibians ............................................................................................................... 161 中国生物多样性红色名录·内陆鱼类 Redlist of China’s Biodiversity·Inland Fishes ........................................................................................................ 186 中国生物多样性红色名录·哺乳类 Redlist of China’s Biodiversity·Mammals 序 科 中文名 评估 学名 评估依据 特有种 号 Chinese Family Chinese 等级 Scientific Names Assessment Criteria Endemic No. Family Names Names Status 1 马科 Equidae 野马 Equus ferus EW 2 牛科 Bovidae 野水牛 Bubalus arnee EW 3 牛科 Bovidae 高鼻羚羊 Saiga tatarica EW 4 犀科 Rhinocerotidae 双角犀 Dicerorhinus sumatrensis RE 5 犀科 Rhinocerotidae 爪哇犀 Rhinoceros sondaicus RE 6 犀科 Rhinocerotidae 大独角犀 Rhinoceros unicornis RE 7 鼩鼱科 Soricidae 高氏缺齿鼩 Chodsigoa caovansunga CR B1+2a;C1 8 懒猴科 Lorisidae 倭蜂猴 Nycticebus pygmaeus CR A2bd;C2a(i) 9 猴科 Cercopithecidae 北豚尾猴 Macaca leonina CR A2bd;C2a(i) 10 猴科 Cercopithecidae -
Zootaxa,Paraphyly of Chinese Amolops (Anura, Ranidae) and Phylogenetic Position of The
Zootaxa 1531: 49–55 (2007) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2007 · Magnolia Press ISSN 1175-5334 (online edition) Paraphyly of Chinese Amolops (Anura, Ranidae) and phylogenetic position of the rare Chinese frog, Amolops tormotus HONG-XIA CAI1, 2, JING CHE2, JUN-FENG PANG2, ER-MI ZHAO1,4& YA-PING ZHANG2, 3,4 1Key Laboratory of Bio-resources and Eco-environment (Ministry of Education), College of Life Sciences, Sichuan University, Chengdu, China, 610064 2Laboratory of Cellular and Molecular Evolution, Kunming Institute of Zoology, the Chinese Academy of Sciences, Kunming, China, 650223 3Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming, China, 650091 4Corresponding authors. E-mail: [email protected]; [email protected] Abstract In order to evaluate the five species groups of Chinese Amolops based on morphological characteristics, and to clarify the phylogenetic position of the concave-eared torrent frog Amolops tormotus, we investigated the phylogeny of Amolops by maximum parsimony, Bayesian Inference, and maximum likelihood methods using two mitochondrial DNA fragments (12S rRNA, 16S rRNA). Our results supported a sister group relationship of Amolops ricketti and Amolops hainanensis. However, the grouping of Amolops mantzorum and Amolops monticola needs to be resolved with more data. Amolops tormotus was nested in genus Odorrana. Thus, recognition of the A. tormotus group is unwarranted and A. tormotus should be referred to genus Odorrana as O. tormota. This species is the sister group of O. nasica plus O. versabilis. The new classification implies that the genus Wurana is to be considered as junior subjective synonym of Odorrana.