Minimization of Exogenous Signals in ES Cell Culture Induces Rostral Hypothalamic Differentiation
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With His Knack for Knowing What Stem Cells Want, Yoshiki Sasai Has Grown an Eye and Parts of a Brain in a Dish
THE BRAINMAKER BY DAVID CYRANOSKI With his knack for knowing what stem cells want, Yoshiki Sasai has grown an eye and parts of a brain in a dish. n December 2010, Robin Ali became suddenly coaxing neural stem cells to grow into elaborate structures. excited by the usually mundane task of reviewing As well as the optic cup1, he has cultivated the delicate tissue a scientific paper. “I was running around my room, layers of the cerebral cortex2 and a rudimentary, hormone- I waving the manuscript,” he recalls. The paper making pituitary gland3. He is now well on the way to growing described how a clump of embryonic stem cells had grown a cerebellum4 — the brain structure that coordinates move- into a rounded goblet of retinal tissue. The structure, called ment and balance. “These papers make for the most addictive an optic cup, forms the back of the eye in a growing embryo. series of stem-cell papers in recent years,” says Luc Leyns, a But this one was in a dish, and videos accompanying the paper stem-cell scientist at the Free University of Brussels. showed the structure slowly sprouting and blossoming. For Sasai’s work is more than tissue engineering: it tackles HANS SAUTTER Ali, an ophthalmologist at University College London who questions that have puzzled developmental biologists for has devoted two decades to repairing vision, the implications decades. How do the proliferating stem cells of an embryo were immediate. “It was clear to me it was a landmark paper,” organize themselves seamlessly into the complex structures he says. -
Acid Bath Offers Easy Path to Stem Cells
NEWS IN FOCUS that the pluripotent cells were converted mature cells and not pre-existing pluripotent cells. So she made pluripotent cells by stressing T cells, a type of white blood cell whose maturity is clear from a rearrangement that its genes undergo OBOKATA HARUKO during development. She also caught the con- version of T cells to pluripotent cells on video. Obokata called the phenomenon stimulus- triggered acquisition of pluripotency (STAP). The results could fuel a long-running debate. For years, various groups of scientists have reported finding pluripotent cells in the mam- malian body, such as the multipotent adult pro- genitor cells described4 by Catherine Verfaillie, a molecular biologist then at the University of Minnesota in Minneapolis. But others have had difficulty reproducing such findings. Obokata started the current project in the laboratory of tissue engineer Charles Vacanti at Harvard Uni- versity in Cambridge, Massachusetts, by looking at cells that Vacanti’s group thought to be pluri- potent cells isolated from the body5. But her A mouse embryo injected with cells made pluripotent through stress, tagged with a fluorescent protein. results suggested a different explanation: that pluripotent cells are created when the body’s REGENERATIVE MEDICINE cells endure physical stress. “The generation of these cells is essentially Mother Nature’s way of responding to injury,” says Vacanti, a co-author of the latest papers2,3. Acid bath offers easy One of the most surprising findings is that the STAP cells can also form placental tissue, something that neither iPS cells nor embryonic path to stem cells stem cells can do. -
Transferrin Variants and Conjugates
(19) TZZ Z ¥ T (11) EP 2 604 623 A2 (12) EUROPEAN PATENT APPLICATION (43) Date of publication: (51) Int Cl.: 19.06.2013 Bulletin 2013/25 C07K 14/79 (2006.01) A61K 47/48 (2006.01) A61K 38/40 (2006.01) C12N 5/10 (2006.01) (21) Application number: 12189421.6 (22) Date of filing: 08.08.2008 (84) Designated Contracting States: • Friis, Esben Peter AT BE BG CH CY CZ DE DK EE ES FI FR GB GR 2730 Herlev (DK) HR HU IE IS IT LI LT LU LV MC MT NL NO PL PT • Hay, Joanna RO SE SI SK TR Nottingham, Nottinghamshire NG2 6QW (GB) • Finnis, Christopher John Arthur (30) Priority: 08.08.2007 EP 07114012 Nottingham, Nottinghamshire NG7 1JB (GB) 02.04.2008 EP 08153938 (74) Representative: Williams, Rachel Clare (62) Document number(s) of the earlier application(s) in Novozymes Biopharma UK Limited accordance with Art. 76 EPC: Castle Court 08787067.1 / 2 201 036 59 Castle Boulevard Nottingham (71) Applicant: Novozymes Biopharma DK A/S Nottinghamshire NG7 1FD (GB) 2880 Bagsvaerd (DK) Remarks: (72) Inventors: This application was filed on 22-10-2012 as a • Sleep, Darrell divisional application to the application mentioned Nottingham, Nottinghamshire NG2 5DS (GB) under INID code 62. (54) Transferrin variants and conjugates (57) Based on the three-dimensional structure of "thiotransferrin"). The variant polypeptide may be conju- transferrin, the inventors have designed variant polypep- gated through the sulphur atom of the Cysteine residue tides (muteins) which have one or more Cysteine resi- to a bioactive compound. dues with a free thiol group (hereinafter referred to as EP 2 604 623 A2 Printed by Jouve, 75001 PARIS (FR) EP 2 604 623 A2 Description Reference to sequence listing 5 [0001] This application contains a Sequence Listing in computer readable form. -
Supplemental Materials ZNF281 Enhances Cardiac Reprogramming
Supplemental Materials ZNF281 enhances cardiac reprogramming by modulating cardiac and inflammatory gene expression Huanyu Zhou, Maria Gabriela Morales, Hisayuki Hashimoto, Matthew E. Dickson, Kunhua Song, Wenduo Ye, Min S. Kim, Hanspeter Niederstrasser, Zhaoning Wang, Beibei Chen, Bruce A. Posner, Rhonda Bassel-Duby and Eric N. Olson Supplemental Table 1; related to Figure 1. Supplemental Table 2; related to Figure 1. Supplemental Table 3; related to the “quantitative mRNA measurement” in Materials and Methods section. Supplemental Table 4; related to the “ChIP-seq, gene ontology and pathway analysis” and “RNA-seq” and gene ontology analysis” in Materials and Methods section. Supplemental Figure S1; related to Figure 1. Supplemental Figure S2; related to Figure 2. Supplemental Figure S3; related to Figure 3. Supplemental Figure S4; related to Figure 4. Supplemental Figure S5; related to Figure 6. Supplemental Table S1. Genes included in human retroviral ORF cDNA library. Gene Gene Gene Gene Gene Gene Gene Gene Symbol Symbol Symbol Symbol Symbol Symbol Symbol Symbol AATF BMP8A CEBPE CTNNB1 ESR2 GDF3 HOXA5 IL17D ADIPOQ BRPF1 CEBPG CUX1 ESRRA GDF6 HOXA6 IL17F ADNP BRPF3 CERS1 CX3CL1 ETS1 GIN1 HOXA7 IL18 AEBP1 BUD31 CERS2 CXCL10 ETS2 GLIS3 HOXB1 IL19 AFF4 C17ORF77 CERS4 CXCL11 ETV3 GMEB1 HOXB13 IL1A AHR C1QTNF4 CFL2 CXCL12 ETV7 GPBP1 HOXB5 IL1B AIMP1 C21ORF66 CHIA CXCL13 FAM3B GPER HOXB6 IL1F3 ALS2CR8 CBFA2T2 CIR1 CXCL14 FAM3D GPI HOXB7 IL1F5 ALX1 CBFA2T3 CITED1 CXCL16 FASLG GREM1 HOXB9 IL1F6 ARGFX CBFB CITED2 CXCL3 FBLN1 GREM2 HOXC4 IL1F7 -
Human Neurophysin II Antibody
Human Neurophysin II Antibody Monoclonal Mouse IgG2B Clone # 62865 Catalog Number: MAB009 DESCRIPTION Species Reactivity Human Specificity Detects human Neurophysin II in direct ELISAs. Source Monoclonal Mouse IgG2B Clone # 62865 Purification Protein A or G purified from ascites Immunogen Synthetic peptide containing human Neurophysin II Accession # P01186 Formulation Lyophilized from a 0.2 μm filtered solution in PBS with Trehalose. See Certificate of Analysis for details. *Small pack size (-SP) is supplied either lyophilized or as a 0.2 μm filtered solution in PBS. APPLICATIONS Please Note: Optimal dilutions should be determined by each laboratory for each application. General Protocols are available in the Technical Information section on our website. Recommended Sample Concentration Immunohistochemistry 5-25 µg/mL See Below DATA Immunohistochemistry Neurophysin II in Human Brain Hippocampus Tissue. Neurophysin II was detected in immersion fixed paraffin- embedded sections of human brain hippocampus tissue using Mouse Anti- Human Neurophysin II Monoclonal Antibody (Catalog # MAB009) at 5 µg/mL for 1 hour at room temperature followed by incubation with the Anti-Mouse IgG VisUCyte™ HRP Polymer Antibody (Catalog # VC001). Before incubation with the primary antibody, tissue was subjected to heat-induced epitope retrieval using Antigen Retrieval Reagent- Basic (Catalog # CTS013). Tissue was stained using DAB (brown) and counterstained with hematoxylin (blue). Specific staining was localized to neurons. View our protocol for IHC Staining with VisUCyte HRP Polymer Detection Reagents. PREPARATION AND STORAGE Reconstitution Reconstitute at 0.5 mg/mL in sterile PBS. Shipping The product is shipped at ambient temperature. Upon receipt, store it immediately at the temperature recommended below. *Small pack size (-SP) is shipped with polar packs. -
Deletion of Vax1 from Gonadotropin-Releasing Hormone (Gnrh) Neurons Abolishes Gnrh Expression and Leads to Hypogonadism and Infertility
3506 • The Journal of Neuroscience, March 23, 2016 • 36(12):3506–3518 Cellular/Molecular Deletion of Vax1 from Gonadotropin-Releasing Hormone (GnRH) Neurons Abolishes GnRH Expression and Leads to Hypogonadism and Infertility Hanne M. Hoffmann,1 Crystal Trang,1 Ping Gong,1 Ikuo Kimura,2 Erica C. Pandolfi,1 and XPamela L. Mellon1 1Department of Reproductive Medicine and the Center for Reproductive Science and Medicine, University of California, San Diego, La Jolla, California 92093-0674, and 2Department of Applied Biological Science, Graduate School of Agriculture, Tokyo University of Agriculture and Technology, Fuchu-shi 183-8509, Japan Hypothalamic gonadotropin-releasing hormone (GnRH) neurons are at the apex of the hypothalamic-pituitary-gonadal axis that regu- lates mammalian fertility. Herein we demonstrate a critical role for the homeodomain transcription factor ventral anterior homeobox 1 (VAX1) in GnRH neuron maturation and show that Vax1 deletion from GnRH neurons leads to complete infertility in males and females. Specifically, global Vax1 knock-out embryos had normal numbers of GnRH neurons at 13 d of gestation, but no GnRH staining was detected by embryonic day 17. To identify the role of VAX1 specifically in GnRH neuron development, Vax1flox mice were generated and lineage tracing performed in Vax1flox/flox:GnRHcre:RosaLacZ mice. This identified VAX1 as essential for maintaining expression of Gnrh1. The absence of GnRH staining in adult Vax1flox/flox:GnRHcre mice led to delayed puberty, hypogonadism, and infertility. To address the mechanism by which VAX1 maintains Gnrh1 transcription, the capacity of VAX1 to regulate Gnrh1 transcription was evaluated in the GnRH cell lines GN11 and GT1-7. -
Diversity of Central Oxytocinergic Projections
Cell and Tissue Research (2019) 375:41–48 https://doi.org/10.1007/s00441-018-2960-5 REVIEW Diversity of central oxytocinergic projections Gustav F. Jirikowski1 Received: 21 September 2018 /Accepted: 6 November 2018 /Published online: 29 November 2018 # Springer-Verlag GmbH Germany, part of Springer Nature 2018 Abstract Localization and distribution of hypothalamic neurons expressing the nonapeptide oxytocin has been extensively studied. Their projections to the neurohypophyseal system release oxytocin into the systemic circulation thus controlling endocrine events associated with reproduction in males and females. Oxytocinergic neurons seem to be confined to the ventral hypothalamus in all mammals. Groups of such cells located outside the supraoptic and the paraventricular nuclei are summarized as Baccessory neurons.^ Although evolutionary probably associated with the classical magocellular nuclei, accessory oxytocin neurons seem to consist of rather heterogenous groups: Periventricular oxytocin neurons may gain contact to the third ventricle to secrete the peptide into the cerebrospinal fluid. Perivascular neurons may be involved in control of cerebral blood flow. They may also gain access to the portal circulation of the anterior pituitary lobe. Central projections of oxytocinergic neurons extend to portions of the limbic system, to the mesencephalon and to the brain stem. Such projections have been associated with control of behaviors, central stress response as well as motor and vegetative functions. Activity of the different oxytocinergic systems seems to be malleable to functional status, strongly influenced by systemic levels of steroid hormones. Keywords Hypothalamo neurohypophyseal system . Circumventricular organs . Liquor contacting neurons . Perivascular system . Limbic system Introduction been shown to occur in prostate, gonads, or skin, OTexpression in the brain seems to be confined to the hypothalamus. -
Curriculum Vitae Kenji Mizuseki, M.D., Ph.D
Curriculum Vitae Kenji Mizuseki, M.D., Ph.D. Personal Information Office address Allen Institute for Brain Science 551 N 34th Street, Seattle, WA 98103, U.S.A. Office phone 1-206-548-8417 Cell phone 1-973-202-4325 E-mail [email protected] [email protected] Web http://www.alleninstitute.org/our-institute/our-team/profiles/kenji-mizuseki Research Experience Senior Scientist, September 2012 – present Allen Institute for Brain Science, WA, U.S.A Research Assistant Professor, March 2012 – August 2012 Neuroscience Institute, New York University, NY, U.S.A. Advisor: Prof. György Buzsáki Research Assistant Professor, March 2009 – March 2012 Center for Molecular and Behavioral Neuroscience, Rutgers University, NJ, U.S.A. Advisor: Prof. György Buzsáki Post-doctoral Fellow, April 2004 – March 2009 Center for Molecular and Behavioral Neuroscience, Rutgers University, NJ, U.S.A. Advisor: Prof. György Buzsáki Staff Research Scientist, March 2002 – March 2004 Center for Developmental Biology, RIKEN, Kobe, Japan Advisor: late Dr. Yoshiki Sasai, Group Leader Research Fellow, Japan Society for the Promotion of Science, April 2000 – February 2002 Institute for Frontier Medical Sciences, Kyoto University, Kyoto, Japan Advisor: late Prof. Yoshiki Sasai Page 1 of 8 Kenji Mizuseki Education Ph.D. in Medicine, March 2000 Graduate School of Medicine, Kyoto University, Kyoto, Japan Advisors: Prof. Shigetada Nakanishi and late Associate Prof. Yoshiki Sasai M.D., March 1996 Faculty of Medicine, Kyoto University, Kyoto, Japan Publications Diba,K., Amarasingham. A., Mizuseki,K., and Buzsáki, G. (2014). Millisecond timescale synchrony among hippocampal neurons. J. Neurosci. 34, 14984-14994. Schomburg, E.W., Fernández-Ruiz, A., Mizuseki, K., Berényi, A., Anastassiou, C.A., Koch, C., and Buzsáki, G. -
Pnas11138correction 14002..14003
Corrections MEDICAL SCIENCES Correction for “Regulation of bone remodeling by vasopressin New, Alberta Zallone, and Mone Zaidi, which appeared in issue 46, explains the bone loss in hyponatremia,” by Roberto Tamma, November 12, 2013, of Proc Natl Acad Sci USA (110:18644–18649; Li Sun, Concetta Cuscito, Ping Lu, Michelangelo Corcelli, first published October 28, 2013; 10.1073/pnas.1318257110). Jianhua Li, Graziana Colaianni, Surinder S. Moonga, Adriana The authors note that Fig. 1 appeared incorrectly. The cor- Di Benedetto, Maria Grano, Silvia Colucci, Tony Yuen, Maria I. rected figure and its legend appear below. Fig. 1. Bone cells express Avprs. Immunofluorescence micrographs (A) and Western immunoblotting (B) show the expression of Avpr1α in osteoblasts and osteoclasts, and as a function of osteoblast (mineralization) and osteoclast (with Rankl) differentiation. The expression of Avp (ligand) and Avpr1α (receptor) in osteoblasts is regulated by 17β-estradiol, as determined by quantitative PCR (C) and Western immunoblotting (D). (Magnification: A,63×.) Because Avp is a small peptide, its precursor neurophysin II is measured. Statistics: Student t test, P values shown compared with 0 h. Stimulation of Erk phosphorylation − (p-Erk) as a function of total Erk (t-Erk) by Avp (10 8 M) in osteoclast precursors (preosteoclasts), osteoclasts (OC), and osteoblasts establishes functionality of − the Avpr1α in the presence or absence of the receptor inhibitor SR49059 (10 8 M) (E). Western immunoblotting showing the expression of Avpr2 in pre- −/− osteoclasts, OCs (F), and osteoblasts (G) isolated from Avpr1α mice, as well as in MC3T3.E1 osteoblast precursors (G). Functionality of Avpr2 was confirmed −/− by the demonstration that cells from Avpr1α mice remained responsive to AVP in reducing the expression of osteoblast differentiation genes, namely Runx2, Osx, Bsp, Atf4, Opn, and Osteocalcin (quantitative PCR, P values shown) (H). -
March 30, 2012, NIH Record, Vol. LXIV, No. 7
MARCH 30, 2012 The Second Best Thing About Payday VOL. LXIV, NO. 7 Brace for More BRAC-Related Commuting Challenges ou may have noticed some roadway changes to support the integration of Wal- ter Reed Army Medical Center with the National Naval Medical Center. Already ABOVE · What is IT? See p. 2 for hints. Y we experience long waits to exit onto Rockville Pike in the evenings and additional congestion in the mornings, adding time and frustration to our daily commute. For features the estimated 18,000 NIH staff who work on the Bethesda campus along with our patients and visitors, it will only get worse before it gets better. 1 Roadway construction to support Base Realignment and Closure (BRAC) for the new NIH Urges Employees to Explore Alternatives to Car Commutes Walter Reed National Military Medical Center started earlier this month. Ex- 3 pect additional delays related to con- Collins To Keynote TEDMED Talks struction of new turn lanes and par- 5 tial widening of Wisconsin Ave., Jones ‘Feedback’ Features Child Care Bridge Rd., and Cedar Ln. Portions of Question Rockville Pike and Connecticut Ave. in 12 Bethesda and North Chevy Chase will NIH’s CFC Success Celebrated see construction work for 3 years. see brac, page 6 One of the busiest intersections in the nation— departments Rockville Pike at Cedar Lane— will get busier. Former NIH Colleagues Kuller Outlines Difficulties in Fighting Briefs 2 Daytons Collaborate on Novel of Iran The Obesity Epidemic Feedback 5 By Rich McManus By Trisha Comsti Digest 9 Dr. Andrew Imbrie Dayton, a senior investi- The rise and spread of obesity in the United Milestones 10 gator at FDA’s Center for Biologics Evaluation States is a serious concern for everyone, young Seen 12 and Research in Bldg. -
Lncrna Mediated Hijacking of T-Cell Hypoxia Response Pathway by Mycobacterium Tuberculosis Predicts Latent to Active Progression in Humans
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.11.037176; this version posted April 13, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. lncRNA Mediated Hijacking of T-cell Hypoxia Response Pathway by Mycobacterium Tuberculosis Predicts Latent to Active Progression in Humans 1# 1# 2# 1* Jyotsana Mehra , Vikram Kumar , Priyansh Srivastava , Tavpritesh Sethi 1 1 2 1* [email protected] , [email protected] , [email protected] , [email protected] 1 2 Indraprastha Institute of Information Technology, Delhi, India, Amity University, Noida, Uttar Pradesh, India # * Equal Contribution, Corresponding Author Abstract- Cytosolic functions of Long non-coding RNAs including mRNA translation masking and sponging are major regulators of biological pathways. Formation of T cell- bounded hypoxic granuloma is a host immune defense for containing infected Mtb-macrophages. Our study exploits the mechanistic pathway of Mtb-induced HIF1A silencing by the antisense lncRNA-HIF1A-AS2 in T cells. Computational analysis of in-vitro T-cell stimulation assays in progressors(n=119) versus latent(n=221) tuberculosis patients revealed the role of lncRNA mediated disruption of hypoxia adaptation pathways in progressors. We found 291 upregulated and 227 downregulated lncRNAs that were correlated at mRNA level with HIF1A and HILPDA which are major players in hypoxia response. We also report novel lncRNA-AC010655 (AC010655.4 and AC010655.2) in cis with HILPDA, both of which contain binding sites for the BARX2 transcription factor, thus indicating a mechanistic role. -
Recent Applications of Retro-Inverso Peptides
International Journal of Molecular Sciences Review Recent Applications of Retro-Inverso Peptides Nunzianna Doti 1, Mario Mardirossian 2, Annamaria Sandomenico 1 , Menotti Ruvo 1,* and Andrea Caporale 3,* 1 Institute of Biostructures and Bioimaging (IBB), National Research Council (CNR), 80134 Napoli, Italy; [email protected] (N.D.); [email protected] (A.S.) 2 Department of Medicine, Surgery and Health Sciences, University of Trieste, 34149 Trieste, Italy; [email protected] 3 Institute of Crystallography (IC), National Research Council (CNR), 34149 Trieste, Italy * Correspondence: [email protected] (M.R.); [email protected] (A.C.) Abstract: Natural and de novo designed peptides are gaining an ever-growing interest as drugs against several diseases. Their use is however limited by the intrinsic low bioavailability and poor stability. To overcome these issues retro-inverso analogues have been investigated for decades as more stable surrogates of peptides composed of natural amino acids. Retro-inverso peptides possess reversed sequences and chirality compared to the parent molecules maintaining at the same time an identical array of side chains and in some cases similar structure. The inverted chirality renders them less prone to degradation by endogenous proteases conferring enhanced half-lives and an increased potential as new drugs. However, given their general incapability to adopt the 3D structure of the parent peptides their application should be careful evaluated and investigated case by case. Here, we review the application of retro-inverso peptides in anticancer therapies, in immunology, in neurodegenerative diseases, and as antimicrobials, analyzing pros and cons of this interesting subclass of molecules. Keywords: retro-inverso peptides; anticancer peptides; drug delivery; peptide antigens; Aβ; IAPP; Citation: Doti, N.; Mardirossian, M.; antimicrobial peptides Sandomenico, A.; Ruvo, M.; Caporale, A.