Aspergillus Oryzae) As a Modern Biotechnological Tool Ghoson M
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Diversity of Endophytic Fungi from Different Verticillium-Wilt-Resistant
J. Microbiol. Biotechnol. (2014), 24(9), 1149–1161 http://dx.doi.org/10.4014/jmb.1402.02035 Research Article Review jmb Diversity of Endophytic Fungi from Different Verticillium-Wilt-Resistant Gossypium hirsutum and Evaluation of Antifungal Activity Against Verticillium dahliae In Vitro Zhi-Fang Li†, Ling-Fei Wang†, Zi-Li Feng, Li-Hong Zhao, Yong-Qiang Shi, and He-Qin Zhu* State Key Laboratory of Cotton Biology, Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Anyang, Henan 455000, P. R. China Received: February 18, 2014 Revised: May 16, 2014 Cotton plants were sampled and ranked according to their resistance to Verticillium wilt. In Accepted: May 16, 2014 total, 642 endophytic fungi isolates representing 27 genera were recovered from Gossypium hirsutum root, stem, and leaf tissues, but were not uniformly distributed. More endophytic fungi appeared in the leaf (391) compared with the root (140) and stem (111) sections. First published online However, no significant difference in the abundance of isolated endophytes was found among May 19, 2014 resistant cotton varieties. Alternaria exhibited the highest colonization frequency (7.9%), *Corresponding author followed by Acremonium (6.6%) and Penicillium (4.8%). Unlike tolerant varieties, resistant and Phone: +86-372-2562280; susceptible ones had similar endophytic fungal population compositions. In three Fax: +86-372-2562280; Verticillium-wilt-resistant cotton varieties, fungal endophytes from the genus Alternaria were E-mail: [email protected] most frequently isolated, followed by Gibberella and Penicillium. The maximum concentration † These authors contributed of dominant endophytic fungi was observed in leaf tissues (0.1797). The evenness of stem equally to this work. -
Pectinolytic Enzymes of Aspergillus Sojae ATCC 20235: the Impact of Bioprocessing Strategy on Solid-State Production and Downstream Processing of Polygalacturonase
Pectinolytic enzymes of Aspergillus sojae ATCC 20235: The impact of bioprocessing strategy on solid-state production and downstream processing of polygalacturonase by Doreen Heerd A thesis submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biochemical Engineering Approved, Thesis Committee Prof. Dr. Marcelo Fernández-Lahore Jacobs University Bremen Prof. Dr. Matthias Ullrich Jacobs University Bremen Dr.-Ing. Dirk Holtmann DECHEMA Research Institute Dr. Sonja Diercks-Horn Jacobs University Bremen Date of Defense: June 14, 2013 School of Engineering and Sciences Summary Since antiquity up to the present Aspergillus spp. like A. oryzae or A. sojae have been used in traditional Japanese fermented food production. The long history of safe use in the production of oriental fermented food favors these microorganisms for their application in industrial enzyme production that are applied in the food industry. This thesis deals with the investigation of A. sojae ATCC 20235 as potential pectinolytic enzyme production organism with focus on polygalacturonase (PG) production under solid-state conditions. Pectinolytic enzymes have been exploited for many industrial applications, e.g. the largest industrial application of these enzymes is in juice and wine production. PGs belong to the pectinolytic enzyme group and are an inherent part of commercial enzyme preparations used for food processing. Recent articles reported about the potential of A. sojae ATCC 20235 to produce PG enzyme in submerged fermentation and via surface cultivation methods. These studies have triggered an interest on the investigation of the potential of this strain for pectinolytic enzyme production in solid-state fermentation (SSF). For this, a microbial screening between A. -
Aspergillus Oryzae in Solid-State and Submerged Fermentations Progress Report on a Multi-Disciplinary Project
FEMS Yeast Research 2 (2002) 245^248 www.fems-microbiology.org Aspergillus oryzae in solid-state and submerged fermentations Progress report on a multi-disciplinary project Rob te Biesebeke a;b, George Ruijter a;e, Yovita S.P. Rahardjo a;c, Marisca J. Hoogschagen a;c, Margreet Heerikhuisen b, Ana Levin a;b, Kenneth G.A. van Driel a;d, Maarten A.I. Schutyser a;c, Jan Dijksterhuis a;d, Yang Zhu b, Frans J. Weber a;c, Willem M. de Vos a;e, Kees A.M.J.J. van den Hondel b, Arjen Rinzema a;c, Peter J. Punt a;b;Ã a Wageningen Centre for Food Sciences, P.O. Box 557, 6700 AN Wageningen, The Netherlands b TNO Nutrition and Food Research Institute, P.O. Box 360, Utrechtseweg 48, 3700 AJ Zeist, The Netherlands c Wageningen University, Food and Bioprocess Engineering group, P.O. Box 8129, 6700 EV Wageningen, The Netherlands d ATO B.V., P.O. Box 17, 6700 AA Wageningen, The Netherlands e Wageningen University, Laboratory of Microbiology, Hesselink van Suchtelenweg 4, 6703 CT Wageningen, The Netherlands Received 3 September 2001; received in revised form 1 February 2002; accepted 5 March 2002 First published online 24 April 2002 Abstract We report the progress of a multi-disciplinary research project on solid-state fermentation (SSF) of the filamentous fungus Aspergillus oryzae. The molecular and physiological aspects of the fungus in submerged fermentation (SmF) and SSF are compared and we observe a number of differences correlated with the different growth conditions. First, the aerial hyphae which occur only in SSFs are mainly responsible for oxygen uptake. -
Diversity of Fungi in Sediments and Water Sampled from the Hot Springs of Lake Magadi and Little Magadi in Kenya
Vol. 10(10), pp. 330-338, 14 March, 2016 DOI: 10.5897/AJMR2015.7879 Article Number: 128717757661 ISSN 1996-0808 African Journal of Microbiology Research Copyright © 2016 Author(s) retain the copyright of this article http://www.academicjournals.org/AJMR Full Length Research Paper Diversity of fungi in sediments and water sampled from the hot springs of Lake Magadi and Little Magadi in Kenya Anne Kelly Kambura1*, Romano Kachiuru Mwirichia2, Remmy Wekesa Kasili1, Edward Nderitu Karanja3, Huxley Mae Makonde4 and Hamadi Iddi Boga5 1Institute for Biotechnology Research, Jomo Kenyatta University of Agriculture and Technology, P. O. Box 62000 - 00200, Nairobi, Kenya. 2Embu University College, P. O. Box 6 - 60100, Embu, Kenya. 3International Centre of Insect Physiology and Ecology (ICIPE), P. O. Box 30772 - 00100, Nairobi, Kenya. 4Pure and Applied Sciences, Technical University of Mombasa, P. O. Box 90420 - 80100, GPO, Mombasa, Kenya. 5Taita Taveta University College, School of Agriculture, Earth and Environmental Sciences, P. O. Box 635-80300 Voi, Kenya. Received 9 December, 2015; Accepted 26 February, 2016 Lake Magadi and Little Magadi are saline, alkaline lakes lying in the southern part of Kenyan Rift Valley. Their solutes are supplied by a series of alkaline hot springs with temperatures as high as 86°C. Previous culture-dependent and independent studies have revealed diverse prokaryotic groups adapted to these conditions. However, very few studies have examined the diversity of fungi in these soda lakes. In this study, amplicons of Internal Transcribed Spacer (ITS) region on Total Community DNA using Illumina sequencing were used to explore the fungal community composition within the hot springs. -
Mannoside Recognition and Degradation by Bacteria Simon Ladeveze, Elisabeth Laville, Jordane Despres, Pascale Mosoni, Gabrielle Veronese
Mannoside recognition and degradation by bacteria Simon Ladeveze, Elisabeth Laville, Jordane Despres, Pascale Mosoni, Gabrielle Veronese To cite this version: Simon Ladeveze, Elisabeth Laville, Jordane Despres, Pascale Mosoni, Gabrielle Veronese. Mannoside recognition and degradation by bacteria. Biological Reviews, Wiley, 2016, 10.1111/brv.12316. hal- 01602393 HAL Id: hal-01602393 https://hal.archives-ouvertes.fr/hal-01602393 Submitted on 26 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Biol. Rev. (2016), pp. 000–000. 1 doi: 10.1111/brv.12316 Mannoside recognition and degradation by bacteria Simon Ladeveze` 1, Elisabeth Laville1, Jordane Despres2, Pascale Mosoni2 and Gabrielle Potocki-Veron´ ese` 1∗ 1LISBP, Universit´e de Toulouse, CNRS, INRA, INSA, 31077, Toulouse, France 2INRA, UR454 Microbiologie, F-63122, Saint-Gen`es Champanelle, France ABSTRACT Mannosides constitute a vast group of glycans widely distributed in nature. Produced by almost all organisms, these carbohydrates are involved in numerous cellular processes, such as cell structuration, protein maturation and signalling, mediation of protein–protein interactions and cell recognition. The ubiquitous presence of mannosides in the environment means they are a reliable source of carbon and energy for bacteria, which have developed complex strategies to harvest them. -
FERMENTED SOY FOODS and SAUCE 359 ^'-Naphthol May Be Added As Preserva- the Isoelectric Point of the Protein in Tive, but That Is Not Neeessary If the Sah the Meal
Fermented Soy Foods and solid or semisolid. They are made by fermenting the soybean curd. Soybean cheeses are unlike American and Euro- pean cheeses in flavor and appearance; Sauce it is too bad that the name cheese has been applied to them. Some of the soy- bean cheeses have a flavor resembling Lewis B. Lockwood^ soy sauce. Others are quite different. Allan K. Smith Many are too salty for the American taste. The Chinese made soy sauce in an- Soybeans, in the form of soy sauce cient times as a household industry. and soybean cheese, paste, sprouts, Descriptions of the process are found in milk, and curd, have been an impor- books written more than 1,500 years tant source of protein in the diet of the ago. It has remained largely a family Chinese and Japanese for centuries. In art; even now^ some manufacturers Asia the whole bean is not ordinarily point wdth pride to the fact that their eaten. The people favor mostly fer- factories have been operated as family mented soy products or other modifi- enterprises for five centuries. cations—sprouts, curd, or milk—in Soy sauce is manufactured by two which the characteristic flavor and basic processes. One involves a fermen- shape of the beans are lost. Only soy tation technique and the other a chem- sauce and monosodium glutamate have ical method. A third procedure, which found much favor in Western countries. is thought to have some advantages, is Asiatic people live largely on a vege- a combination of the two. The third table diet. -
Transcriptome Analysis of Different Growth Stages of Aspergillus Oryzae
He et al. BMC Microbiology (2018) 18:12 https://doi.org/10.1186/s12866-018-1158-z RESEARCHARTICLE Open Access Transcriptome analysis of different growth stages of Aspergillus oryzae reveals dynamic changes of distinct classes of genes during growth Bin He, Zhihong Hu, Long Ma, Haoran Li, Mingqiang Ai, Jizhong Han and Bin Zeng* Abstract Background: The gene expression profile and metabolic pathways of Aspergillus oryzae underlying the anatomical and morphological differentiation across different growth stages have not been fully characterized. The rapid development of next-generation sequencing technologies provides advanced knowledge of the genomic organization of A. oryzae. Results: In this study, we characterized the growth and development of A. oryzae at different growth stages, including the adaptive phase, logarithmic phase, and stationary phase. Our results revealed that A. oryzae undergoes physiological and morphological differentiation across the different stages. RNA-seq was employed to analyze the three stages of A. oryzae, which generated more than 27 million high-quality reads per sample. The analysis of differential gene expression showed more genes expressed differentially upon transition from the adaptive phase to the logarithmic and stationary phases, while relatively steady trend was observed during the transition from the logarithmic phase to the stationary phase. GO classification of the differentially expressed genes among different growth stages revealed that most of these genes were enriched for single-organism process, metabolic process, and catalytic activity. These genes were then subjected to a clustering analysis. The results showed that the cluster with the majority of genes with increased expression upon transition from the adaptive phase to the logarithmic phase, and steady expression from the logarithmic phase to the stationary phase was mainly involved in the carbohydrate and amino acid metabolism. -
Lists of Names in Aspergillus and Teleomorphs As Proposed by Pitt and Taylor, Mycologia, 106: 1051-1062, 2014 (Doi: 10.3852/14-0
Lists of names in Aspergillus and teleomorphs as proposed by Pitt and Taylor, Mycologia, 106: 1051-1062, 2014 (doi: 10.3852/14-060), based on retypification of Aspergillus with A. niger as type species John I. Pitt and John W. Taylor, CSIRO Food and Nutrition, North Ryde, NSW 2113, Australia and Dept of Plant and Microbial Biology, University of California, Berkeley, CA 94720-3102, USA Preamble The lists below set out the nomenclature of Aspergillus and its teleomorphs as they would become on acceptance of a proposal published by Pitt and Taylor (2014) to change the type species of Aspergillus from A. glaucus to A. niger. The central points of the proposal by Pitt and Taylor (2014) are that retypification of Aspergillus on A. niger will make the classification of fungi with Aspergillus anamorphs: i) reflect the great phenotypic diversity in sexual morphology, physiology and ecology of the clades whose species have Aspergillus anamorphs; ii) respect the phylogenetic relationship of these clades to each other and to Penicillium; and iii) preserve the name Aspergillus for the clade that contains the greatest number of economically important species. Specifically, of the 11 teleomorph genera associated with Aspergillus anamorphs, the proposal of Pitt and Taylor (2014) maintains the three major teleomorph genera – Eurotium, Neosartorya and Emericella – together with Chaetosartorya, Hemicarpenteles, Sclerocleista and Warcupiella. Aspergillus is maintained for the important species used industrially and for manufacture of fermented foods, together with all species producing major mycotoxins. The teleomorph genera Fennellia, Petromyces, Neocarpenteles and Neopetromyces are synonymised with Aspergillus. The lists below are based on the List of “Names in Current Use” developed by Pitt and Samson (1993) and those listed in MycoBank (www.MycoBank.org), plus extensive scrutiny of papers publishing new species of Aspergillus and associated teleomorph genera as collected in Index of Fungi (1992-2104). -
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EU Project Number 613678
EU project number 613678 Strategies to develop effective, innovative and practical approaches to protect major European fruit crops from pests and pathogens Work package 1. Pathways of introduction of fruit pests and pathogens Deliverable 1.3. PART 7 - REPORT on Oranges and Mandarins – Fruit pathway and Alert List Partners involved: EPPO (Grousset F, Petter F, Suffert M) and JKI (Steffen K, Wilstermann A, Schrader G). This document should be cited as ‘Grousset F, Wistermann A, Steffen K, Petter F, Schrader G, Suffert M (2016) DROPSA Deliverable 1.3 Report for Oranges and Mandarins – Fruit pathway and Alert List’. An Excel file containing supporting information is available at https://upload.eppo.int/download/112o3f5b0c014 DROPSA is funded by the European Union’s Seventh Framework Programme for research, technological development and demonstration (grant agreement no. 613678). www.dropsaproject.eu [email protected] DROPSA DELIVERABLE REPORT on ORANGES AND MANDARINS – Fruit pathway and Alert List 1. Introduction ............................................................................................................................................... 2 1.1 Background on oranges and mandarins ..................................................................................................... 2 1.2 Data on production and trade of orange and mandarin fruit ........................................................................ 5 1.3 Characteristics of the pathway ‘orange and mandarin fruit’ ....................................................................... -
Posters VII Ifungal Cell Factories
Side 124-235 26/03/04 15:03 Side 187 POSTER VIIIp-1 CLONING AND HETEROLOGOUS EXPRESSION OF A GENE ENCODING PYRANOSE OXIDASE FROM THE WHITE-ROT FUNGUS TRAMETES MULTICOLOR 1 1,2 3 3 1 1 Christian LEITNER , HOANG Lan , Petr Halada , Jindrich VOLC , Klaus D. KULBE , Dietmar HALTRICH and Clemens K. 1 PETERBAUER 1 Division of Food Biotechnology, Dept. of Food Sciences & Technology, University of Natural Resources and Applied Life Sciences (BOKU) Muthgasse 18, A-1190 Wien, Austria; tel +43-1-360066274, fax +43-1-360066251, [email protected] 2 Institute of Biological and Food Technology, Hanoi University of Technology, Dai Co Viet Road, Hanoi, Vietnam 3 Institute of Microbiology, Academy of Sciences of the Czech Republic Vídenská 1083, CZ-142 20 Praha 4, Czech Republic Pyranose oxidase (pyranose 2-oxidase, P2O; EC 1.1.3.10) is an enzyme that widely occurs in basidiomycetous fungi. It catalyzes the C-2 oxidation of several aldopyranoses to form the respective 2-keto derivatives, transferring electrons to molecular oxygen to yield hydrogen peroxide. There is indication of an involvement of P2O in lignocellulose degradation; the exact physiological role of P2O, however, is not clearly understood to date. P2O is a potentially interesting enzyme for biotechnological applications, its reaction products (2-keto sugars) can be attractive inter- mediates in the production of food additives, such as fructose, tagatose, or isomaltulose, and can easily be produced in high yields. Trametes multicolor is a potent producer of P2O activity and forms P2O constitutively during growth on a number of carbon sources. -
Final Screening Assessment for Aspergillus Oryzae ATCC 11866
Final Screening Assessment for Aspergillus oryzae ATCC 11866 Environment Canada Health Canada January 2017 Final Screening Assessment Aspergillus oryzae ATCC 11866 ii Final Screening Assessment Aspergillus oryzae ATCC 11866 Cat. No.: En14-267 ISBN 2017E-PDF 978-0-660-07392-7 Information contained in this publication or product may be reproduced, in part or in whole, and by any means, for personal or public non-commercial purposes, without charge or further permission, unless otherwise specified. You are asked to: Exercise due diligence in ensuring the accuracy of the materials reproduced; Indicate both the complete title of the materials reproduced, as well as the author organization; and Indicate that the reproduction is a copy of an official work that is published by the Government of Canada and that the reproduction has not been produced in affiliation with or with the endorsement of the Government of Canada. Commercial reproduction and distribution is prohibited except with written permission from the author. For more information, please contact Environment and Climate Change Canada’s Inquiry Centre at 1-800-668-6767 (in Canada only) or 819-997-2800 or email to [email protected]. © Her Majesty the Queen in Right of Canada, represented by the Minister of the Environment, 2017. Aussi disponible en français iii Final Screening Assessment Aspergillus oryzae ATCC 11866 Synopsis Pursuant to paragraph 74(b) of the Canadian Environmental Protection Act, 1999 (CEPA), the Minister of the Environment and the Minister of Health have conducted a screening assessment on A. oryzae strain ATCC 11866. A. oryzae ATCC 11866 is a fungus that is a member of the Aspergillus flavus group and has characteristics in common with two members of that group, A.