Lichen Care Guide Background SCIENTIFIC Lichen Are Often Mistaken for Plants
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Genetic Variation Within and Among Populations of the Threatened Lichen Lobaria Pulmonaria in Switzerland and Implications for I
MEC820.fm Page 2049 Saturday, December 18, 1999 1:20 PM Molecular Ecology (1999) 8, 2049–2059 GeneticBlackwell Science, Ltd variation within and among populations of the threatened lichen Lobaria pulmonaria in Switzerland and implications for its conservation S. ZOLLER,* F. LUTZONI† and C. SCHEIDEGGER* *Swiss Federal Institute for Forest, Snow and Landscape Research, CH-8903 Birmensdorf, Switzerland, †Department of Botany, The Field Museum of Natural History, Chicago IL 60605, USA Abstract The foliose epiphytic lichen Lobaria pulmonaria has suffered a significant decline in European lowlands during the last decades and therefore is considered as endangered throughout Europe. An assessment of the genetic variability is necessary to formulate biologically sound conservation recommendations for this species. We investigated the genetic diversity of the fungal symbiont of L. pulmonaria using 143 specimens sampled from six populations (two small, one medium, three large) in the lowland, the Jura Moun- tains, the pre-Alps and the Alps of Switzerland. Among all nuclear and mitochondrial regions sequenced for this study, variability was found only in the internal transcribed spacer (ITS I), with three polymorphic sites, and in the nuclear ribosomal large subunit (nrLSU), with four polymorphic sites. The variable sites in the nrLSU are all located within a putative spliceosomal intron. We sequenced these two regions for 81 specimens and detected six genotypes. Two genotypes were common, two were found only in the more diverse populations and two were found only in one population each. There was no correlation between population size and genetic diversity. The highest genetic diversity was found in populations where the fungal symbiont is reproducing sexually. -
The Puzzle of Lichen Symbiosis
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1503 The puzzle of lichen symbiosis Pieces from Thamnolia IOANA ONUT, -BRÄNNSTRÖM ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6214 ISBN 978-91-554-9887-0 UPPSALA urn:nbn:se:uu:diva-319639 2017 Dissertation presented at Uppsala University to be publicly examined in Lindhalsalen, EBC, Norbyvägen 14, Uppsala, Thursday, 1 June 2017 at 09:15 for the degree of Doctor of Philosophy. The examination will be conducted in English. Faculty examiner: Associate Professor Anne Pringle (University of Wisconsin-Madison, Department of Botany). Abstract Onuț-Brännström, I. 2017. The puzzle of lichen symbiosis. Pieces from Thamnolia. Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1503. 62 pp. Uppsala: Acta Universitatis Upsaliensis. ISBN 978-91-554-9887-0. Symbiosis brought important evolutionary novelties to life on Earth. Lichens, the symbiotic entities formed by fungi, photosynthetic organisms and bacteria, represent an example of a successful adaptation in surviving hostile environments. Yet many aspects of the lichen symbiosis remain unexplored. This thesis aims at bringing insights into lichen biology and the importance of symbiosis in adaptation. I am using as model system a successful colonizer of tundra and alpine environments, the worm lichens Thamnolia, which seem to only reproduce vegetatively through symbiotic propagules. When the genetic architecture of the mating locus of the symbiotic fungal partner was analyzed with genomic and transcriptomic data, a sexual self-incompatible life style was revealed. However, a screen of the mating types ratios across natural populations detected only one of the mating types, suggesting that Thamnolia has no potential for sexual reproduction because of lack of mating partners. -
Lichen Life in Antarctica a Review on Growth and Environmental Adaptations of Lichens in Antarctica
Lichen Life in Antarctica A review on growth and environmental adaptations of lichens in Antarctica Individual Project for ANTA 504 for GCAS 08/09 Lorna Little Contents Antarctic Vegetation ...............................................................................................................................3 The Basics of Lichen Life .........................................................................................................................4 Environmental Influences .......................................................................................................................7 Nutrients .............................................................................................................................................7 Water Relations and Temperature .....................................................................................................7 UV‐B Radiation and Climate Change Effects.......................................................................................8 Variations in Lichen Growth and Colonisation......................................................................................10 Growth rate.......................................................................................................................................10 Case Studies of Antarctic Lichens .....................................................................................................13 Colonisation ......................................................................................................................................15 -
Lichen Declines in the Arctic Why Are Lichens
What’sWhat’s NotNot toto Lichen?Lichen? The importance of lichen in the Arctic tundra. Crustose Fruticose Foliose Squamulose Fungus + Cyanobacteria = Lichen What are Lichens? Fungus + Algae + Cyanobacteria = Lichen Fungus + Algae = Lichen . A composite organism is made up of two or more independent organisms. Lichens are comprised of a fungus containing algae and/or cyanobacteria living with the fungal filaments. The algae and cyanobacteria provide nutrients to fungi in the form of carbohydrates. In return, they receive protection and nutrients from the fungi, making this a mutually beneficial relationship. An association with cyanobacteria also benefits fungi in another way: the cyanobacteria take nitrogen from the atmosphere and convert it into a form that fungi need for essential life functions. . They do not contain roots, stems, leaves or vascular tissues. These components are typically required for obtaining water and nutrients from the surrounding environment. Instead, lichens absorb water and nutrients from the atmosphere. . Many species of lichens are very good at living in extreme environments like the Arctic tundra. . Lichens will absorb everything that is present within the atmosphere and cannot differentiate between nutrients and non-nutrient particles. This makes them extremely sensitive to harmful toxins and pollutants. They can signal a decline in an ecosystem’s condition. Why are Lichens Important? . They are essential components of ecosystems, with ecosystems depending on them for their continued survival. There are about 1600 lichen species in the Arctic out of a total of about 13,000 worldwide. . Many herbivores are dependent upon lichen. This includes wildlife such as lemmings, musk oxen, arctic hares, caribou, and moose. -
The Lichens 19
GALLOWAY: HUMBOLDT MOUNTAINS: THE LICHENS 19 V E GET A T ION S T U DIE SON TH E HUM B 0 L D T M 0 U N T A INS FIORDLAND PART 2: THE LICHENS D. J. GALLOWAY Biochemistry Department, University of Otago, Dunedin SUMMARY The commonest epiphytic foliose lichens in the beech forest are species of Sticta, some often A detailed list is given of the species of reaching great size: S. hirta, S. coronata, S. macrolichens collected from the western slopes of the Humboldt Mountains, Fiordland. The latifrons, S. filix. The most common epiphytic fruticose lichens are species of Usnea and composition and possible importance is dis- cussed of "sub-regional" lichen communities. Sphaerophorus. U snea xanthopoga and U. capiUacea are INTRODUCTION common on twigs of Nothofagus in well-lit situations either at the forest edge or at the The lichen flora of New Zealand is still top of the canopy. Sphaerophorus tener is a imperfectly known and details of its regional common epiphyte and other members of this composition are lacking for much of the genus represented in lesser numbers are several country. A survey of the rather scattered varieties of S. melanocarpus and occasionally literature reveals that very little taxonomic or S. stereocauloides. This, the largest species of ecological work has been done on the alpine the genus and the only one to have cephalodia, lichens. The great difficulty in field lichenology appears to be restricted to areas of high rainfall is accurate recognition of species, particularly in west and south-west areas of the South in alpine regions, where crustaceous lichens, Island. -
What Is a Lichen – a Prison Or an Opportunity? Lichens Cannot Be Classified As Plants
What is a lichen – a prison or an opportunity? Lichens cannot be classified as plants. They are associations between cup fungi ascomycetes plus either green algae (Trebouxia sp.) or cyanobacteria (e.g. Nostoc), members of three kingdoms outside the plant kingdom. Simon Schwendener discovered the dual nature of lichens in 1869 : Ascomycetes surround some single- celled green algae with a fibrous net to compel the new slaves to work for them, a view that was replaced with romanticized notion of a harmonious symbiosis. Mycobiont gets sugar alcohols from green algae or glucose + nitrogen from cyanobacteria, which are stored in an inacessible form (e.g. mannitol). Lichens Species & Diversity Lichens consist of a fungus (the mycobiont, mostly an ascomycete ) & a photosynthetic partner (the photobiont or phycobiont ), usually either a green alga (commonly Trebouxia ) or cyanobacterium (c. Nostoc ) All lichens have an upper cortex , which is a dense, protective skin of fungal tissue that acts l ike a blind that opens after watering . Below that is a photosynthetic layer, which can be a colony of either green algae or cyanobacteria. Then there is a layer of loose threads (hyphae) of the fungus, called the medulla or the medullary layer . Fructicose & Foliose lichens have a lower cortex , others just have an exposed medulla. Crustose lichens never have a lower cortex-their fungal layer attaches firmly to the substrate. What is that? Is that a plant? Is that a fungus? Is that a lichen? What the …halloh! Spanish moss (Tillandsia usneoides ) Usnea is a lichen (a composite organism closely resembles its namesake ( Usnea , or made from algae and fungi) and is referred beard lichen), but in fact it is not to as Old Man's Beard. -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
Lichens of Alaska
A Genus Key To The LICHENS OF ALASKA By Linda Hasselbach and Peter Neitlich January 1998 National Park Service Gates of the Arctic National Park and Preserve 201 First Avenue Fairbanks, AK 99701 ACKNOWLEDGMENTS We would like to acknowledge the following Individuals for their kind assistance: Jim Riley generously provided lichen photographs, with the exception of three copyrighted photos, Alectoria sarmentosa, Peltigera neopolydactyla and P. membranaceae, which are courtesy of Steve and Sylvia Sharnoff, and Neph roma arctica by Shelli Swanson. The line drawing on the cover, as well as those for Psoroma hypnarum and the 'lung-like' illustration, are the work of Alexander Mikulin as found In Lichens of Southeastern Alaska by Gelser, Dillman, Derr, and Stensvold. 'Cyphellae' and 'pseudocyphellae' are also by Alexander Mikulin as appear In Macrolichens of the Pacific Northwest by McCune and Gelser. The Cladonia apothecia drawing is the work of Bruce McCune from Macrolichens of the Northern Rocky Mountains by McCune and Goward. Drawings of Brodoa oroarcttca, Physcia aipolia apothecia, and Peltigera veins are the work of Trevor Goward as found in The Lichens of British Columbia. Part I - Foliose and Squamulose Species by Goward, McCune and Meldlnger. And the drawings of Masonhalea and Cetraria ericitorum are the work of Bethia Brehmer as found In Thomson's American Arctic Macrolichens. All photographs and line drawings were used by permission. Chiska Derr, Walter Neitlich, Roger Rosentreter, Thetus Smith, and Shelli Swanson provided valuable editing and draft comments. Thanks to Patty Rost and the staff of Gates of the Arctic National Park and Preserve for making this project possible. -
Abstracts for IAL 6- ABLS Joint Meeting (2008)
Abstracts for IAL 6- ABLS Joint Meeting (2008) AÐALSTEINSSON, KOLBEINN 1, HEIÐMARSSON, STARRI 2 and VILHELMSSON, ODDUR 1 1The University of Akureyri, Borgir Nordurslod, IS-600 Akureyri, Iceland, 2Icelandic Institute of Natural History, Akureyri Division, Borgir Nordurslod, IS-600 Akureyri, Iceland Isolation and characterization of non-phototrophic bacterial symbionts of Icelandic lichens Lichens are symbiotic organisms comprise an ascomycete mycobiont, an algal or cyanobacterial photobiont, and typically a host of other bacterial symbionts that in most cases have remained uncharacterized. In the current project, which focuses on the identification and preliminary characterization of these bacterial symbionts, the species composition of the resident associate microbiota of eleven species of lichen was investigated using both 16S rDNA sequencing of isolated bacteria growing in pure culture and Denaturing Gradient Gel Electrophoresis (DGGE) of the 16S-23S internal transcribed spacer (ITS) region amplified from DNA isolated directly from lichen samples. Gram-positive bacteria appear to be the most prevalent, especially actinomycetes, although bacilli were also observed. Gamma-proteobacteria and species from the Bacteroides/Chlorobi group were also observed. Among identified genera are Rhodococcus, Micrococcus, Microbacterium, Bacillus, Chryseobacterium, Pseudomonas, Sporosarcina, Agreia, Methylobacterium and Stenotrophomonas . Further characterization of selected strains indicated that most strains ar psychrophilic or borderline psychrophilic, -
(Thallus) of a Lichen Photobiont(S) for Survival the Basic Structure of a Lichen Is Like That of the Popular Peanut Butter Cup Candy
ENY-2051 The Life of Lichen1 James Stevenson, Lara B. Milligan, and Jennifer L. Gillett-Kaufman2 Florida is home to a vast diversity of an amazing group tentacles of a sea anemone. The brightly colored clownfish of organisms called lichens. What are these organisms? acts as a lure that draws other fish into the deadly tentacles. They are neither a plant nor an animal, but they are living, The clownfish’s immunity to the anemone’s toxin allows it breathing, reproducing, and complex organisms, the result a safe place to live while feeding on scraps of food left over of a seemingly impossible relationship. from the anemone. The anemone gets the advantage of a live-in fish lure. There is a saying that goes: “Freddie Fungus and Alice Alga took a lichen for each other,” but it is a bit more complicated than two different organisms, a fungus and an alga, coexist- ing. Lichens are composed of several organisms from three different kingdoms: fungi, plants, and bacteria. Figure 2. Jester lichen (Cladonia leporina). Credits: J. Stevenson, UF/IFAS Lichens are a bit different. The algal component of a lichen Figure 1. Tree trunk with many lichen species. Credits: J. Stevenson, UF/IFAS can survive outside of the relationship, while the fungal component cannot. Therefore, rather than a mutually The association of these separate organisms is often referred beneficial relationship, there are signs that the fungus is to as a mutualistic relationship, defined as two or more actually taking nutrients away from the alga, or parasitizing organisms living in a mutually beneficial arrangement. -
Fossil Usnea and Similar Fruticose Lichens from Palaeogene Amber
The Lichenologist (2020), 52, 319–324 doi:10.1017/S0024282920000286 Standard Paper Fossil Usnea and similar fruticose lichens from Palaeogene amber Ulla Kaasalainen1 , Jouko Rikkinen2,3 and Alexander R. Schmidt1 1Department of Geobiology, University of Göttingen, Göttingen, Germany; 2Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland and 3Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland Abstract Fruticose lichens of the genus Usnea Dill. ex Adans. (Parmeliaceae), generally known as beard lichens, are among the most iconic epiphytic lichens in modern forest ecosystems. Many of the c. 350 currently recognized species are widely distributed and have been used as bioin- dicators in air pollution studies. Here we demonstrate that usneoid lichens were present in the Palaeogene amber forests of Europe. Based on general morphology and annular cortical fragmentation, one fossil from Baltic amber can be assigned to the extant genus Usnea. The unique type of cortical cracking indirectly demonstrates the presence of a central cord that keeps the branch intact even when its cortex is split into vertebrae-like segments. This evolutionary innovation has remained unchanged since the Palaeogene, contributing to the considerable ecological flexibility that allows Usnea species to flourish in a wide variety of ecosystems and climate regimes. The fossil sets the minimum age for Usnea to 34 million years (late Eocene). While the other similar fossils from Baltic and Bitterfeld ambers cannot be definitely assigned to the same genus, they underline the diversity of pendant lichens in Palaeogene amber forests. Key words: Ascomycota, Baltic amber, Bitterfeld amber, lichen fossils (Accepted 16 April 2020) Introduction et al. -
Effect of Isolation Conditions on Diversity of Endolichenic Fungal Communities from a Foliose Lichen, Parmotrema Tinctorum
Journal of Fungi Article Effect of Isolation Conditions on Diversity of Endolichenic Fungal Communities from a Foliose Lichen, Parmotrema tinctorum Ji Ho Yang 1, Seung-Yoon Oh 2 , Wonyong Kim 1 , Jung-Jae Woo 1, Hyeonjae Kim 1 and Jae-Seoun Hur 1,* 1 Korean Lichen Research Institute, Sunchon National University, 255 Jungang-Ro, Suncheon 57922, Korea; [email protected] (J.H.Y.); [email protected] (W.K.); [email protected] (J.-J.W.); [email protected] (H.K.) 2 Department of Biology and Chemistry, Changwon National University, 20 Changwondaehak-ro, Changwon 51140, Korea; [email protected] * Correspondence: [email protected]; Tel.: +82-61-750-3383 Abstract: Endolichenic fungi (ELF) are emerging novel bioresources because their diverse secondary metabolites have a wide range of biological activities. Metagenomic analysis of lichen thalli demon- strated that the conventional isolation method of ELF covers a very limited range of ELF, and the development of an advanced isolation method is needed. The influence of four variables were investigated in this study to determine the suitable conditions for the isolation of more diverse ELF from a radially growing foliose lichen, Parmotrema tinctorum. Four variables were tested: age of the thallus, severity of surface-sterilization of the thallus, size of a thallus fragment for the inoculation, and nutrient requirement. In total, 104 species (1885 strains) of ELF were isolated from the five individual thalli of P. tinctorum collected at five different places. Most of the ELF isolates belong to Sordariomycetes. Because each part of lichen thallus (of different age) has unique ELF species, the whole thallus of the foliose lichen is needed to isolate diverse ELF.