Mytilidae: Bathymodiolinae)
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Adaptation to Deep-Sea Chemosynthetic Environments As Revealed by Mussel Genomes
ARTICLES PUBLISHED: 3 APRIL 2017 | VOLUME: 1 | ARTICLE NUMBER: 0121 Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomes Jin Sun1, 2, Yu Zhang3, Ting Xu2, Yang Zhang4, Huawei Mu2, Yanjie Zhang2, Yi Lan1, Christopher J. Fields5, Jerome Ho Lam Hui6, Weipeng Zhang1, Runsheng Li2, Wenyan Nong6, Fiona Ka Man Cheung6, Jian-Wen Qiu2* and Pei-Yuan Qian1, 7* Hydrothermal vents and methane seeps are extreme deep-sea ecosystems that support dense populations of specialized macro benthos such as mussels. But the lack of genome information hinders the understanding of the adaptation of these ani- mals to such inhospitable environments. Here we report the genomes of a deep-sea vent/seep mussel (Bathymodiolus plati- frons) and a shallow-water mussel (Modiolus philippinarum). Phylogenetic analysis shows that these mussel species diverged approximately 110.4 million years ago. Many gene families, especially those for stabilizing protein structures and removing toxic substances from cells, are highly expanded in B. platifrons, indicating adaptation to extreme environmental conditions. The innate immune system of B. platifrons is considerably more complex than that of other lophotrochozoan species, including M. philippinarum, with substantial expansion and high expression levels of gene families that are related to immune recognition, endocytosis and caspase-mediated apoptosis in the gill, revealing presumed genetic adaptation of the deep-sea mussel to the presence of its chemoautotrophic endosymbionts. A follow-up metaproteomic analysis of the gill of B. platifrons shows metha- notrophy, assimilatory sulfate reduction and ammonia metabolic pathways in the symbionts, providing energy and nutrients, which allow the host to thrive. Our study of the genomic composition allowing symbiosis in extremophile molluscs gives wider insights into the mechanisms of symbiosis in other organisms such as deep-sea tubeworms and giant clams. -
New Records of Three Deep-Sea Bathymodiolus Mussels (Bivalvia: Mytilida: Mytilidae) from Hydrothermal Vent and Cold Seeps in Taiwan
352 Journal of Marine Science and Technology, Vol. 27, No. 4, pp. 352-358 (2019) DOI: 10.6119/JMST.201908_27(4).0006 NEW RECORDS OF THREE DEEP-SEA BATHYMODIOLUS MUSSELS (BIVALVIA: MYTILIDA: MYTILIDAE) FROM HYDROTHERMAL VENT AND COLD SEEPS IN TAIWAN Meng-Ying Kuo1, Dun- Ru Kang1, Chih-Hsien Chang2, Chia-Hsien Chao1, Chau-Chang Wang3, Hsin-Hung Chen3, Chih-Chieh Su4, Hsuan-Wien Chen5, Mei-Chin Lai6, Saulwood Lin4, and Li-Lian Liu1 Key words: new record, Bathymodiolus, deep-sea, hydrothermal vent, taiwanesis (von Cosel, 2008) is the only reported species of cold seep, Taiwan. this genus from Taiwan. It was collected from hydrothermal vents near Kueishan Islet off the northeast coast of Taiwan at depths of 200-355 m. ABSTRACT Along with traditional morphological classification, mo- The deep sea mussel genus, Bathymodiolus Kenk & Wilson, lecular techniques are commonly used to study the taxonomy 1985, contains 31 species, worldwide. Of which, one endemic and phylogenetic relationships of deep sea mussels. Recently, species (Bathymodiolus taiwanesis) was reported from Taiwan the complete mitochondrial genomes have been sequenced (MolluscaBase, 2018). Herein, based on the mitochondrial COI from mussels of Bathymodiolus japonicus, B. platifrons and results, we present 3 new records of the Bathymodiolus species B. septemdierum (Ozawa et al., 2017). Even more, the whole from Taiwan, namely Bathymodiolus platifrons, Bathymodiolus genome of B. platifrons was reported with sequence length of securiformis, and Sissano Bathymodiolus sp.1 which were collected 1.64 Gb nucleotides (Sun et al., 2017). from vent or seep environments at depth ranges of 1080-1380 Since 2013, under the Phase II National energy program of m. -
M208p147.Pdf
MARINE ECOLOGY PROGRESS SERIES Vol. 208: 147–155, 2000 Published December 8 Mar Ecol Prog Ser Phylogenetic characterization of endosymbionts in three hydrothermal vent mussels: influence on host distributions Yoshihiro Fujiwara1,*, Ken Takai2, Katsuyuki Uematsu3, Shinji Tsuchida1, James C. Hunt1, Jun Hashimoto1 1Marine Ecosystems Research Department, Japan Marine Science and Technology Center (JAMSTEC), 2-15 Natsushima, Yokosuka 237-0061, Japan 2Frontier Research Program for Deep-Sea Environment, Japan Marine Science and Technology Center (JAMSTEC), 2-15 Natsushima, Yokosuka 237-0061, Japan 3Marine Work Japan Co., 2-15 Natsushima, Yokosuka 237-0061, Japan ABSTRACT: The bacterial endosymbionts of 3 hydrothermal vent mussels from Japanese waters were characterized by transmission electron microscopic (TEM) observation and phylogenetic analy- ses of 16S ribosomal RNA gene sequences. Endosymbionts of Bathymodiolus septemdierum were related to sulfur-oxidizing bacteria (thioautotrophs), while endosymbionts of B. platifrons and B. japonicus were related to methane-oxidizing bacteria (methanotrophs). This is the first report of deep-sea mussels containing only methanotrophs (lacking thioautotrophs) from hydrothermal vents. Comparison of methane and hydrogen sulfide concentrations in end-member fluids from deep-sea hydrothermal vents indicated that methane concentrations were much higher in habitats containing Bathymodiolus spp. which harbored only methanotrophs than in other habitats of hydrothermal vent mussels. The known distribution of other -
Evolutionary Relationships Within the "Bathymodiolus" Childressi Group
Cah. Biol. Mar. (2006) 47 : 403-407 Evolutionary relationships within the "Bathymodiolus" childressi group W. Jo JONES* and Robert C. VRIJENHOEK Monterey Bay Aquarium Research Institute, Moss Landing CA 95064, USA, *Corresponding Author: Phone: 831-775-1789, Fax: 831-775-1620, E-mail: [email protected] Abstract: Recent discoveries of deep-sea mussel species from reducing environments have revealed a much broader phylogenetic diversity than previously imagined. In this study, we utilize a commercially available DNA extraction kit to obtain high-quality DNA from two mussel shells collected eight years ago at the Edison Seamount near Papua New Guinea. We include these two species into a comprehensive phylogeny of all available deep-sea mussels. Our analysis of nuclear and mitochondrial DNA sequences supports previous conclusions that deep-sea mussels presently subsumed within the genus Bathymodiolus comprise a paraphyletic assemblage. This assemblage is composed of a monophyletic group that might properly be called Bathymodiolus and a distinctly parallel grouping that we refer to as the “Bathymodiolus” childressi clade. The “childressi” clade itself is diverse containing species from the western Pacific and Atlantic basins. Keywords: Bathymodiolus l Phylogeny l Childressi clade l Deep-sea l Mussel Introduction example, Gustafson et al. (1998) noted that “Bathymodiolus” childressi Gustafson et al. (their quotes), Many new species of mussels (Bivalvia: Mytilidae: a newly discovered species from the Gulf of Mexico, Bathymodiolinae) have been discovered during the past differed from other known Bathymodiolus for a number of two decades of deep ocean exploration. A number of genus morphological characters: multiple separation of posterior names are currently applied to members of this subfamily byssal retractors, single posterior byssal retractor scar, and (e.g., Adipicola, Bathymodiolus, Benthomodiolus, rectum that enters ventricle posterior to level of auricular Gigantidas, Idas, Myrina and Tamu), but diagnostic ostia. -
Dispersal and Differentiation of Deep-Sea Mussels of the Genus Bathymodiolus (Mytilidae, Bathymodiolinae)
Hindawi Publishing Corporation Journal of Marine Biology Volume 2009, Article ID 625672, 15 pages doi:10.1155/2009/625672 Research Article Dispersal and Differentiation of Deep-Sea Mussels of the Genus Bathymodiolus (Mytilidae, Bathymodiolinae) Akiko Kyuno,1 Mifue Shintaku,1 Yuko Fujita,1 Hiroto Matsumoto,1 Motoo Utsumi,2 Hiromi Watanabe,3 Yoshihiro Fujiwara,3 and Jun-Ichi Miyazaki4 1 Institute of Biological Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan 2 Institute of Agricultural and Forest Engineering, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan 3 Research Program for Marine Biology and Ecology, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Natsushima, Yokosuka, Kanagawa 237-0061, Japan 4 Faculty of Education and Human Sciences, University of Yamanashi, Kofu, Yamanashi 400-8510, Japan Correspondence should be addressed to Jun-Ichi Miyazaki, [email protected] Received 22 February 2009; Revised 27 May 2009; Accepted 30 July 2009 Recommended by Horst Felbeck We sequenced the mitochondrial ND4 gene to elucidate the evolutionary processes of Bathymodiolus mussels and mytilid relatives. Mussels of the subfamily Bathymodiolinae from vents and seeps belonged to 3 groups and mytilid relatives from sunken wood and whale carcasses assumed the outgroup positions to bathymodioline mussels. Shallow water mytilid mussels were positioned more distantly relative to the vent/seep mussels, indicating an evolutionary transition from shallow to deep sea via sunken wood and whale carcasses. Bathymodiolus platifrons is distributed in the seeps and vents, which are approximately 1500 km away. There was no significant genetic differentiation between the populations. There existed high gene flow between B. septemdierum and B. -
Genomics and Transcriptomics of the Green Mussel Explain the Durability
www.nature.com/scientificreports OPEN Genomics and transcriptomics of the green mussel explain the durability of its byssus Koji Inoue1*, Yuki Yoshioka1,2, Hiroyuki Tanaka3, Azusa Kinjo1, Mieko Sassa1,2, Ikuo Ueda4,5, Chuya Shinzato1, Atsushi Toyoda6 & Takehiko Itoh3 Mussels, which occupy important positions in marine ecosystems, attach tightly to underwater substrates using a proteinaceous holdfast known as the byssus, which is tough, durable, and resistant to enzymatic degradation. Although various byssal proteins have been identifed, the mechanisms by which it achieves such durability are unknown. Here we report comprehensive identifcation of genes involved in byssus formation through whole-genome and foot-specifc transcriptomic analyses of the green mussel, Perna viridis. Interestingly, proteins encoded by highly expressed genes include proteinase inhibitors and defense proteins, including lysozyme and lectins, in addition to structural proteins and protein modifcation enzymes that probably catalyze polymerization and insolubilization. This assemblage of structural and protective molecules constitutes a multi-pronged strategy to render the byssus highly resistant to environmental insults. Mussels of the bivalve family Mytilidae occur in a variety of environments from freshwater to deep-sea. Te family incudes ecologically important taxa such as coastal species of the genera Mytilus and Perna, the freshwa- ter mussel, Limnoperna fortuneri, and deep-sea species of the genus Bathymodiolus, which constitute keystone species in their respective ecosystems 1. One of the most important characteristics of mussels is their capacity to attach to underwater substrates using a structure known as the byssus, a proteinous holdfast consisting of threads and adhesive plaques (Fig. 1)2. Using the byssus, mussels ofen form dense clusters called “mussel beds.” Te piled-up structure of mussel beds enables mussels to support large biomass per unit area, and also creates habitat for other species in these communities 3,4. -
Vent Fauna in the Mariana Trough 25 Shigeaki Kojima and Hiromi Watanabe
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Springer - Publisher Connector Vent Fauna in the Mariana Trough 25 Shigeaki Kojima and Hiromi Watanabe Abstract The Mariana Trough is a back-arc basin in the Northwestern Pacific. To date, active hydrothermal vent fields associated with the back-arc spreading center have been reported from the central to the southernmost region of the basin. In spite of a large variation of water depth, no clear segregation of vent faunas has been recognized among vent fields in the Mariana Trough and a large snail Alviniconcha hessleri dominates chemosynthesis- based communities in most fields. Although the Mariana Trough approaches the Mariana Arc at both northern and southern ends, the fauna at back-arc vents within the trough appears to differ from arc vents. In addition, a distinct chemosynthesis-based community was recently discovered in a methane seep site on the landward slope of the Mariana Trench. On the other hand, some hydrothermal vent fields in the Okinawa Trough backarc basin and the Izu-Ogasawara Arc share some faunal groups with the Mariana Trough. The Mariana Trough is a very interesting area from the zoogeographical point of view. Keywords Alvinoconcha hessleri Chemosynthetic-based communities Hydrothermal vent Mariana Arc Mariana Trough 25.1 Introduction The first hydrothermal vent field discovered in the Mariana Trough was the Alice Springs, in the Central Mariana Trough The Mariana Trough is a back-arc basin in the Northwestern (18 130 N, 144 430 E: 3,600 m depth) in 1987 (Craig et al. -
Moytirra: Discovery of the First Known Deep‐Sea Hydrothermal Vent Field
Article Volume 14, Number 10 16 October 2013 doi: 10.1002/ggge.20243 ISSN: 1525-2027 Moytirra: Discovery of the first known deep-sea hydrothermal vent field on the slow-spreading Mid-Atlantic Ridge north of the Azores A. J. Wheeler School of Biological, Earth and Environmental Sciences, University College Cork, Distillery Fields, North Mall, Cork, Ireland ([email protected]) B. Murton National Oceanography Centre Southampton, Southampton, UK J. Copley Ocean and Earth Sciences, University of Southampton, Southampton, UK A. Lim School of Biological, Earth and Environmental Sciences, University College Cork, Cork, Ireland J. Carlsson School of Biological, Earth and Environmental Sciences, University College Cork, Cork, Ireland Now at School of Biology and Environmental Science, National University of Ireland - Dublin, Dublin, Ireland P. Collins Ryan Institute, National University of Ireland - Galway, Galway, Ireland Now at School of Biology and Environmental Science, National University of Ireland - Dublin, Dublin, Ireland B. Dorschel School of Biological, Earth and Environmental Sciences, University College Cork, Cork, Ireland Now at Geosciences/Geophysics, Alfred Wegener Institute, Bremerhaven, Germany D. Green National Oceanography Centre Southampton, Southampton, UK M. Judge Geological Survey of Ireland, Dublin, Ireland V. Nye Ocean and Earth Sciences, University of Southampton, Southampton, UK J. Benzie, A. Antoniacomi, and M. Coughlan School of Biological, Earth and Environmental Sciences, University College Cork, Cork, Ireland K. Morris Ocean and Earth Sciences, University of Southampton, Southampton, UK © 2013. American Geophysical Union. All Rights Reserved. 4170 WHEELER ET AL.: MOYTIRRA DEEP-SEA HYDROTHERMAL VENT 10.1002/ggge.20243 [1] Geological, biological, morphological, and hydrochemical data are presented for the newly discovered Moytirra vent field at 45oN. -
Abbreviation Kiel S. 2005, New and Little Known Gastropods from the Albian of the Mahajanga Basin, Northwestern Madagaskar
1 Reference (Explanations see mollusca-database.eu) Abbreviation Kiel S. 2005, New and little known gastropods from the Albian of the Mahajanga Basin, Northwestern Madagaskar. AF01 http://www.geowiss.uni-hamburg.de/i-geolo/Palaeontologie/ForschungImadagaskar.htm (11.03.2007, abstract) Bandel K. 2003, Cretaceous volutid Neogastropoda from the Western Desert of Egypt and their place within the noegastropoda AF02 (Mollusca). Mitt. Geol.-Paläont. Inst. Univ. Hamburg, Heft 87, p 73-98, 49 figs., Hamburg (abstract). www.geowiss.uni-hamburg.de/i-geolo/Palaeontologie/Forschung/publications.htm (29.10.2007) Kiel S. & Bandel K. 2003, New taxonomic data for the gastropod fauna of the Uzamba Formation (Santonian-Campanian, South AF03 Africa) based on newly collected material. Cretaceous research 24, p. 449-475, 10 figs., Elsevier (abstract). www.geowiss.uni-hamburg.de/i-geolo/Palaeontologie/Forschung/publications.htm (29.10.2007) Emberton K.C. 2002, Owengriffithsius , a new genus of cyclophorid land snails endemic to northern Madagascar. The Veliger 45 (3) : AF04 203-217. http://www.theveliger.org/index.html Emberton K.C. 2002, Ankoravaratra , a new genus of landsnails endemic to northern Madagascar (Cyclophoroidea: Maizaniidae?). AF05 The Veliger 45 (4) : 278-289. http://www.theveliger.org/volume45(4).html Blaison & Bourquin 1966, Révision des "Collotia sensu lato": un nouveau sous-genre "Tintanticeras". Ann. sci. univ. Besancon, 3ème AF06 série, geologie. fasc.2 :69-77 (Abstract). www.fossile.org/pages-web/bibliographie_consacree_au_ammon.htp (20.7.2005) Bensalah M., Adaci M., Mahboubi M. & Kazi-Tani O., 2005, Les sediments continentaux d'age tertiaire dans les Hautes Plaines AF07 Oranaises et le Tell Tlemcenien (Algerie occidentale). -
Dead Mussels As Food-Stepping Stone Habitats for Deep-Sea Hydrothermal Fauna
Dead mussels as food-stepping stone habitats for deep-sea hydrothermal fauna. Fergus De Faoite (6456340) Master’s Thesis A collaborative project between Utrecht University (UU) and the Royal Netherlands Institute for Sea Research (NIOZ). First Supervisor: Dr. Sabine Gollner (NIOZ) Second Supervisor: Dr. Jack Middelburg (UU) Abstract Hydrothermal vents are patchy ephemeral habitats which are hotspots of productivity in the deep sea. Vent endemic fauna may require intermediate stepping stone habitats to travel from vent to vent with these stepping stones typically comprising of decaying organic matter. Dead Bathymodiolus and Mytilus mussels were placed in ~2200 meters water depth at approximately 4 km distance from the Rainbow Vent Field for one year in order to measure the propensity for vent fauna to use dead mussels as stepping stone habitats. The vent endemic Dirivultidae copepods, Bathymodiolus mussels and generalist Hesionidae and Capillidae polychaetes settled among the mussels. Species richness and evenness was very low among the meiofauna with generalist Tisbe copepods accounting for almost all of the copepods. Macrofaunal samples were much richer and more even in comparison. The meat from the vent endemic Bathymodiolus mussels was consumed after one year while there was still some meat and a sulphurous smell present in the shallow water Mytilus mussels, indicating that decomposition was still taking place. This study indicates that dead mussels could act as a stepping stone habitat for some symbiotic and non-symbiotic vent fauna as such animals were found in the samples. Juvenile Bathymodiolus mussels settled among the dead mussels indicating that conditions were suitable for settlement for symbiotic fauna. -
Gill Symbionts of the Cold-Seep Mussel Bathymodiolus Platifrons
Fish and Shellfish Immunology 86 (2019) 246–252 Contents lists available at ScienceDirect Fish and Shellfish Immunology journal homepage: www.elsevier.com/locate/fsi Full length article Gill symbionts of the cold-seep mussel Bathymodiolus platifrons: Composition, environmental dependency and immune control T ∗ ∗∗ Jiajia Yua,c, Minxiao Wanga,b, Baozhong Liua,b, Xin Yuea, , Chaolun Lia,b, a CAS Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Center for Ocean Mega-Science, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao, 266071, China b Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, 1 Wenhai Road, Qingdao, 266000, China c University of Chinese Academy of Sciences, Beijing, 100049, China ARTICLE INFO ABSTRACT Keywords: Deep-sea Bathymodiolus mussels depend on the organic carbon supplied by symbionts inside their gills. In this Bathymodiolus platifrons study, optimized methods of quantitative real-time PCR and fluorescence in situ hybridization targeted to both Methanotrophs mRNA and 16S rRNA were used to investigate the gill symbionts of the cold-seep mussel Bathymodiolus platifrons, FISH including species composition, environmental dependency and immune control by the host. Our results showed qRT-PCR that methanotrophs were the major symbiotic bacteria in the gills of B. platifrons, while thiotrophs were scarce. Lysosomal system In the mussels freshly collected from the deep sea, methanotrophs were housed in bacteriocytes in a unique circular pattern, and a lysosome-related gene (VAMP) encoding a vesicle-associated membrane protein was expressed at a high level and presented exactly where the methanotrophs occurred. After the mussels were reared for three months in aquaria without methane supply, the abundance of methanotrophs decreased sig- nificantly and their circle-shaped distribution pattern disappeared; in addition, the expression of VAMP de- creased significantly. -
Fossil Clams from a Serpentinite-Hosted Sedimented
Fossil clams from a serpentinite-hosted sedimented vent field near the active smoker complex Rainbow, MAR, 36 degrees 13 ’ N: Insight into the biogeography of vent fauna Franck Lartaud, Marc de Rafélis, Graham Oliver, Elena Krylova, Jerome Dyment, Benoit Ildefonse, Remy Thibaud, Pascal Gente, Eva Hoise, Anne-Leila Meistertzheim, et al. To cite this version: Franck Lartaud, Marc de Rafélis, Graham Oliver, Elena Krylova, Jerome Dyment, et al.. Fossil clams from a serpentinite-hosted sedimented vent field near the active smoker complex Rainbow, MAR, 36 degrees 13 ’ N: Insight into the biogeography of vent fauna. Geochemistry, Geophysics, Geosystems, AGU and the Geochemical Society, 2010, 11, pp.Q0AE01. 10.1029/2010GC003079. hal-00523467 HAL Id: hal-00523467 https://hal.archives-ouvertes.fr/hal-00523467 Submitted on 9 Dec 2011 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Article Volume 11 18 August 2010 Q0AE01, doi:10.1029/2010GC003079 ISSN: 1525‐2027 Fossil clams from a serpentinite‐hosted sedimented vent field near the active smoker complex Rainbow,