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Intra-Field Variation of Prokaryotic Communities on and Below the Seafloor 24 in the Back-Arc Hydrothermal System of the Southern Mariana Trough
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Springer - Publisher Connector Intra-Field Variation of Prokaryotic Communities On and Below the Seafloor 24 in the Back-Arc Hydrothermal System of the Southern Mariana Trough Shingo Kato, Moriya Ohkuma, and Akihiko Yamagishi Abstract Deep-sea hydrothermal vents harbor diverse prokaryotes. There are a variety of habitat types in a deep-sea hydrothermal field, e.g., active and inactive chimneys, iron-rich mats, venting fluid and hydrothermal plume. Numerous studies have shown the diversity and composition of prokaryotic communities in individual habitats. However, it is still unclear whether and how the characteristics of prokaryotic communities in their respective habitats are different. Previously, we reported 16S rRNA genes in a variety of habitats, i.e., hydrothermally active and inactive chimneys, iron-rich mats, a vent fluid, crustal fluids from boreholes, as well as ambient seawater in a back-arc basin hydrothermal field of the Southern Mariana Trough. Here we summarize the prokaryotic communities in the col- lected samples at higher taxonomic resolution (up to family level) using the detected 16S rRNA gene sequences and compare them using recently developed bioinformatics tools. The comparative analysis clearly highlights differences in prokaryotic communities among the habitat types on and below the seafloor in the Southern Mariana Trough. Furthermore, descriptions of cultured species and environmental clones close to the detected sequences provide valuable information for understanding of their distribution and potential of ecological roles in deep-sea hydrothermal fields. Keywords 16S rRNA gene Archaea Back-arc basin Bacteria Chemosynthetic ecosystem Deep- sea hydrothermal vents Prokaryotic community 24.1 Introduction The online version of this chapter (doi:10.1007/978-4-431-54865-2_24) Deep-sea hydrothermal vents are oases for organisms on the contains supplementary material, which is available to authorized users. -
New Records of Three Deep-Sea Bathymodiolus Mussels (Bivalvia: Mytilida: Mytilidae) from Hydrothermal Vent and Cold Seeps in Taiwan
352 Journal of Marine Science and Technology, Vol. 27, No. 4, pp. 352-358 (2019) DOI: 10.6119/JMST.201908_27(4).0006 NEW RECORDS OF THREE DEEP-SEA BATHYMODIOLUS MUSSELS (BIVALVIA: MYTILIDA: MYTILIDAE) FROM HYDROTHERMAL VENT AND COLD SEEPS IN TAIWAN Meng-Ying Kuo1, Dun- Ru Kang1, Chih-Hsien Chang2, Chia-Hsien Chao1, Chau-Chang Wang3, Hsin-Hung Chen3, Chih-Chieh Su4, Hsuan-Wien Chen5, Mei-Chin Lai6, Saulwood Lin4, and Li-Lian Liu1 Key words: new record, Bathymodiolus, deep-sea, hydrothermal vent, taiwanesis (von Cosel, 2008) is the only reported species of cold seep, Taiwan. this genus from Taiwan. It was collected from hydrothermal vents near Kueishan Islet off the northeast coast of Taiwan at depths of 200-355 m. ABSTRACT Along with traditional morphological classification, mo- The deep sea mussel genus, Bathymodiolus Kenk & Wilson, lecular techniques are commonly used to study the taxonomy 1985, contains 31 species, worldwide. Of which, one endemic and phylogenetic relationships of deep sea mussels. Recently, species (Bathymodiolus taiwanesis) was reported from Taiwan the complete mitochondrial genomes have been sequenced (MolluscaBase, 2018). Herein, based on the mitochondrial COI from mussels of Bathymodiolus japonicus, B. platifrons and results, we present 3 new records of the Bathymodiolus species B. septemdierum (Ozawa et al., 2017). Even more, the whole from Taiwan, namely Bathymodiolus platifrons, Bathymodiolus genome of B. platifrons was reported with sequence length of securiformis, and Sissano Bathymodiolus sp.1 which were collected 1.64 Gb nucleotides (Sun et al., 2017). from vent or seep environments at depth ranges of 1080-1380 Since 2013, under the Phase II National energy program of m. -
Evolutionary Relationships Within the "Bathymodiolus" Childressi Group
Cah. Biol. Mar. (2006) 47 : 403-407 Evolutionary relationships within the "Bathymodiolus" childressi group W. Jo JONES* and Robert C. VRIJENHOEK Monterey Bay Aquarium Research Institute, Moss Landing CA 95064, USA, *Corresponding Author: Phone: 831-775-1789, Fax: 831-775-1620, E-mail: [email protected] Abstract: Recent discoveries of deep-sea mussel species from reducing environments have revealed a much broader phylogenetic diversity than previously imagined. In this study, we utilize a commercially available DNA extraction kit to obtain high-quality DNA from two mussel shells collected eight years ago at the Edison Seamount near Papua New Guinea. We include these two species into a comprehensive phylogeny of all available deep-sea mussels. Our analysis of nuclear and mitochondrial DNA sequences supports previous conclusions that deep-sea mussels presently subsumed within the genus Bathymodiolus comprise a paraphyletic assemblage. This assemblage is composed of a monophyletic group that might properly be called Bathymodiolus and a distinctly parallel grouping that we refer to as the “Bathymodiolus” childressi clade. The “childressi” clade itself is diverse containing species from the western Pacific and Atlantic basins. Keywords: Bathymodiolus l Phylogeny l Childressi clade l Deep-sea l Mussel Introduction example, Gustafson et al. (1998) noted that “Bathymodiolus” childressi Gustafson et al. (their quotes), Many new species of mussels (Bivalvia: Mytilidae: a newly discovered species from the Gulf of Mexico, Bathymodiolinae) have been discovered during the past differed from other known Bathymodiolus for a number of two decades of deep ocean exploration. A number of genus morphological characters: multiple separation of posterior names are currently applied to members of this subfamily byssal retractors, single posterior byssal retractor scar, and (e.g., Adipicola, Bathymodiolus, Benthomodiolus, rectum that enters ventricle posterior to level of auricular Gigantidas, Idas, Myrina and Tamu), but diagnostic ostia. -
Sulfide Mineralization in an Ultramafic-Rock Hosted Seafloor
Marine Geology 245 (2007) 20–39 www.elsevier.com/locate/margeo Sulfide mineralization in an ultramafic-rock hosted seafloor hydrothermal system: From serpentinization to the formation of Cu–Zn–(Co)-rich massive sulfides ⁎ Ana Filipa A. Marques a,b, , Fernando J.A.S. Barriga a, Steven D. Scott b a CREMINER (LA/ISR), Universidade de Lisboa, Faculdade de Ciências, Departamento de Geologia, Edif. C6 Piso 4. 1749-016 Campo Grande, Lisboa, Portugal b Scotiabank Marine Geology Research Laboratory, Department of Geology, University of Toronto, 22 Russell St., Toronto, Canada M5S 3B1 Received 12 December 2006; received in revised form 2 May 2007; accepted 12 May 2007 Abstract The Rainbow vent field is an ultramafic rock-hosted seafloor hydrothermal system located on the Mid-Atlantic ridge issuing high temperature, acidic, metal-rich fluids. Hydrothermal products include Cu–Zn–(Co)-rich massive sulfides with characteristics comparable to those found in mafic volcanic-hosted massive sulfide deposits. Petrography, mineralogy and geochemistry of nonmineralized and mineralized rocks sampled in the Rainbow vent field indicate that serpentinized peridotites host the hydrothermal vent system but serpentinization reactions occurred prior to and independently of the sulfide mineralization event. The onset of sulfide mineralization is reflected by extensive textural and chemical transformations in the serpentine-group minerals that show clear signs of hydrothermal corrosion. Element remobilization is a recurrent process in the Rainbow vent field rocks and, during simple peridotite serpentinization, Ni and Cr present in olivine and pyroxene are incorporated in the pseudomorphic serpentine mesh and bastite, respectively. Ni is later remobilized from pseudomorphic serpentine into the newly formed sulfides as a result of extensive hydrothermal alteration. -
Deep-Sea Life Issue 14, January 2020 Cruise News E/V Nautilus Telepresence Exploration of the U.S
Deep-Sea Life Issue 14, January 2020 Welcome to the 14th edition of Deep-Sea Life (a little later than anticipated… such is life). As always there is bound to be something in here for everyone. Illustrated by stunning photography throughout, learn about the deep-water canyons of Lebanon, remote Pacific Island seamounts, deep coral habitats of the Caribbean Sea, Gulf of Mexico, Southeast USA and the North Atlantic (with good, bad and ugly news), first trials of BioCam 3D imaging technology (very clever stuff), new deep pelagic and benthic discoveries from the Bahamas, high-risk explorations under ice in the Arctic (with a spot of astrobiology thrown in), deep-sea fauna sensitivity assessments happening in the UK and a new photo ID guide for mesopelagic fish. Read about new projects to study unexplored areas of the Mid-Atlantic Ridge and Azores Plateau, plans to develop a water-column exploration programme, and assessment of effects of ice shelf collapse on faunal assemblages in the Antarctic. You may also be interested in ongoing projects to address and respond to governance issues and marine conservation. It’s all here folks! There are also reports from past meetings and workshops related to deep seabed mining, deep-water corals, deep-water sharks and rays and information about upcoming events in 2020. Glance over the many interesting new papers for 2019 you may have missed, the scientist profiles, job and publishing opportunities and the wanted section – please help your colleagues if you can. There are brief updates from the Deep- Ocean Stewardship Initiative and for the deep-sea ecologists amongst you, do browse the Deep-Sea Biology Society president’s letter. -
Long-Term Monitoring of the Mid-Atlantic Ridge
Long-Term Monitoring of the Mid-Atlantic Ridge Proceedings of the III MOMAR Workshop 7-9 April 2005 Lisbon, Portugal Convenors Fernando Barriga Universidade de Lisboa, Portugal Ana Colaço University of the Azores, Portugal Javier Escartin CNRS, Paris, France Emilie Hooft University of Oregon, USA Susan Humphris Woods Hole Oceanographic Institution, USA Nadine Le Bris IFREMER, France Celia Lee Universidade de Lisboa, Portugal Nuno Lourenço University of Algarve, Portugal Frank Wenzhofer Max Planck Institute for Marine Microbiology, Germany 1 INTRODUCTION The third in a series of workshops to define the objectives of the Monitoring the Mid- Atlantic Ridge (MOMAR) project was convened at the Museu de Ciêcia in Lisbon, Portugal, on 7-9 April 2005 with approximately 80 scientists from 12 countries participating. MOMAR brings together researchers from the international scientific community to plan a long-term monitoring program on the Mid-Atlantic Ridge in a region south of the Azores. With an emphasis on real-time data retrieval, MOMAR plans to combine long-term monitoring of geological, physico-chemical, and biological activity at hydrothermal vents with broader-scale monitoring of tectonic, volcanic and hydrothermal processes at the ridge axis. These studies will lead to a comprehensive, interdisciplinary understanding of temporal changes in, and linkages among magmatic, tectonic, seismic, hydrothermal, and biological activity at this slow-spreading plate boundary, enabling the development of quantitative, whole-system models of the inter-linked -
Genomics and Transcriptomics of the Green Mussel Explain the Durability
www.nature.com/scientificreports OPEN Genomics and transcriptomics of the green mussel explain the durability of its byssus Koji Inoue1*, Yuki Yoshioka1,2, Hiroyuki Tanaka3, Azusa Kinjo1, Mieko Sassa1,2, Ikuo Ueda4,5, Chuya Shinzato1, Atsushi Toyoda6 & Takehiko Itoh3 Mussels, which occupy important positions in marine ecosystems, attach tightly to underwater substrates using a proteinaceous holdfast known as the byssus, which is tough, durable, and resistant to enzymatic degradation. Although various byssal proteins have been identifed, the mechanisms by which it achieves such durability are unknown. Here we report comprehensive identifcation of genes involved in byssus formation through whole-genome and foot-specifc transcriptomic analyses of the green mussel, Perna viridis. Interestingly, proteins encoded by highly expressed genes include proteinase inhibitors and defense proteins, including lysozyme and lectins, in addition to structural proteins and protein modifcation enzymes that probably catalyze polymerization and insolubilization. This assemblage of structural and protective molecules constitutes a multi-pronged strategy to render the byssus highly resistant to environmental insults. Mussels of the bivalve family Mytilidae occur in a variety of environments from freshwater to deep-sea. Te family incudes ecologically important taxa such as coastal species of the genera Mytilus and Perna, the freshwa- ter mussel, Limnoperna fortuneri, and deep-sea species of the genus Bathymodiolus, which constitute keystone species in their respective ecosystems 1. One of the most important characteristics of mussels is their capacity to attach to underwater substrates using a structure known as the byssus, a proteinous holdfast consisting of threads and adhesive plaques (Fig. 1)2. Using the byssus, mussels ofen form dense clusters called “mussel beds.” Te piled-up structure of mussel beds enables mussels to support large biomass per unit area, and also creates habitat for other species in these communities 3,4. -
M66 Final.Pdf (Download)
METEOR-Berichte 09-2 SUBFLUX Cruise No. 66 August 12 – December 22, 2005, Las Palmas (Spain) – Talcahuano (Chile) Warner Brückmann, Monika Rhein, Gregor Rehder, Jörg Bialas, Achim Kopf Editorial Assistance: Andreas Krell Alfred-Wegener-Institut für Polar- und Meeresforschung, Bremerhaven Leitstelle METEOR Institut für Meereskunde der Universität Hamburg 2009 The METEOR-Berichte are published at irregular intervals. They are working papers for people who are occupied with the respective expedition and are intended as reports for the funding institutions. The opinions expressed in the METEOR-Berichte are only those of the authors. The reports can be obtained from: Universität Hamburg Zentrum für Meeres- und Klimaforschung Institut für Meereskunde Leitstelle METEOR/MERIAN Bundesstr. 53 20146 Hamburg Germany The reports are available in PDF format from http://www.dfg-ozean.de/. The METEOR expeditions are funded by the Deutsche Forschungsgemeinschaft and the Bundesministerium für Bildung und Forschung. Addresses of the editors: Dr. Warner Brückmann Tel: +49 (0)431 600 2819 Leibniz-Institut für Meereswissenschaften Fax: +49 (0)431 600 2916 IFM-GEOMAR Email: [email protected] Wischhofstr. 1-3 24148 Kiel Germany Prof. Dr. Monika Rhein Tel: +49 (0)421 218 2408 Universität Bremen Fax: +49 (0)421 218 7018 Institut für Umweltphysik (IUP) Email: [email protected] Abteilung Ozeanographie Otto-Hahn-Allee 28359 Bremen Germany Prof. Dr. Gregor Rehder Tel: +49 (0)381 5197 336 Leibniz-Institut für Ostseeforschung Fax: +49 (0)381 5197 302 Seestraße 15 Email: [email protected] 18119 Rostock Germany Dr. Jörg Bialas Tel: +49 (0)431 600-2329 Leibniz-Institut für Meereswissenschaften Fax: +49 (0)431 600-2922 IFM-GEOMAR Email: [email protected] Wischhofstr. -
Hydrothermal Vent Plume at the Mid-Atlantic Ridge
https://doi.org/10.5194/bg-2019-189 Preprint. Discussion started: 20 June 2019 c Author(s) 2019. CC BY 4.0 License. 1 Successional patterns of (trace) metals and microorganisms in the Rainbow 2 hydrothermal vent plume at the Mid-Atlantic Ridge 3 Sabine Haalboom1,*, David M. Price1,*,#, Furu Mienis1, Judith D.L van Bleijswijk1, Henko C. de 4 Stigter1, Harry J. Witte1, Gert-Jan Reichart1,2, Gerard C.A. Duineveld1 5 1 NIOZ Royal Netherlands Institute for Sea Research, department of Ocean Systems, and Utrecht University, PO Box 59, 6 1790 AB Den Burg, Texel, The Netherlands 7 2 Utrecht University, Faculty of Geosciences, 3584 CD Utrecht, The Netherlands 8 * These authors contributed equally to this work 9 # Current address: University of Southampton, Waterfront Campus, European Way, Southampton, UK, 10 SO14 3ZH. 11 [email protected]; [email protected] 12 13 Keywords: Rainbow vent; Epsilonproteobacteria; Hydrothermal vent plume; Deep-sea mining; Rare 14 earth elements; Seafloor massive sulfides 15 16 Abstract 17 Hydrothermal vent fields found at mid-ocean ridges emit hydrothermal fluids which disperse as neutrally 18 buoyant plumes. From these fluids seafloor massive sulfides (SMS) deposits are formed which are being 19 explored as possible new mining sites for (trace) metals and rare earth elements (REE). It has been 20 suggested that during mining activities large amounts of suspended matter will appear in the water column 21 due to excavation processes, and due to discharge of mining waste from the surface vessel. Understanding 22 how natural hydrothermal plumes evolve as they spread away from their source and how they affect their 23 surrounding environment may provide some analogies for the behaviour of the dilute distal part of 24 chemically enriched mining plumes. -
Rainbow Hydrothermal Vent Field 2
Proforma for compiling the characteristics of a potential MPA A General information Fig. 1: Rimicaris exoculata aggregation at one of the Rainbow vents. Photograph courtesy of © ATOS/Ifremer 1. Proposed name of MPA Rainbow hydrothermal vent field 2. Aim of MPA • Protect, conserve and restore species, habitats and ecological processes which are adversely affected as result of human activities; • Prevent degradation of and damage to species, habitats and ecological processes following the precautionary principle. 3. Status of the location The Rainbow vent field is located beyond the limits of national jurisdiction of the coastal States in the OSPAR Maritime Area. According to Article 134 (2) UNCLOS, activities in the Area (sea-bed, ocean floor and subsoil thereof) shall be governed by the provisions of Part XI. According to Article 137 (2) UNCLOS “All rights in the resources of the Area are vested in mankind as a whole, on whose behalf the Authority shall act. These resources are not subject to alienation. The Minerals recovered from the Area, however, may only be alienated in accordance with this Part and the rules, regulations and procedures of the Authority.” According to Article 86 et seq. UNCLOS the superjacent waters are considered as High Seas, which are open to all States, including the freedom of scientific research. According to Article 238 UNCLOS all States have the right to conduct marine scientific research. 4. Marine region OSPAR Region V, Mid Atlantic Ridge, SW of Azores Fig. 2: Map of the OSPAR Maritime Area with Exclusive Economic Zones (EEZ) of coastal states indicated in light blue. -
Vent Fauna in the Mariana Trough 25 Shigeaki Kojima and Hiromi Watanabe
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Springer - Publisher Connector Vent Fauna in the Mariana Trough 25 Shigeaki Kojima and Hiromi Watanabe Abstract The Mariana Trough is a back-arc basin in the Northwestern Pacific. To date, active hydrothermal vent fields associated with the back-arc spreading center have been reported from the central to the southernmost region of the basin. In spite of a large variation of water depth, no clear segregation of vent faunas has been recognized among vent fields in the Mariana Trough and a large snail Alviniconcha hessleri dominates chemosynthesis- based communities in most fields. Although the Mariana Trough approaches the Mariana Arc at both northern and southern ends, the fauna at back-arc vents within the trough appears to differ from arc vents. In addition, a distinct chemosynthesis-based community was recently discovered in a methane seep site on the landward slope of the Mariana Trench. On the other hand, some hydrothermal vent fields in the Okinawa Trough backarc basin and the Izu-Ogasawara Arc share some faunal groups with the Mariana Trough. The Mariana Trough is a very interesting area from the zoogeographical point of view. Keywords Alvinoconcha hessleri Chemosynthetic-based communities Hydrothermal vent Mariana Arc Mariana Trough 25.1 Introduction The first hydrothermal vent field discovered in the Mariana Trough was the Alice Springs, in the Central Mariana Trough The Mariana Trough is a back-arc basin in the Northwestern (18 130 N, 144 430 E: 3,600 m depth) in 1987 (Craig et al. -
Mytilidae: Bathymodiolinae)
Open Journal of Marine Science, 2013, 3, 31-39 http://dx.doi.org/10.4236/ojms.2013.31003 Published Online January 2013 (http://www.scirp.org/journal/ojms) Dispersal Ability and Environmental Adaptability of Deep-Sea Mussels Bathymodiolus (Mytilidae: Bathymodiolinae) Jun-Ichi Miyazaki1*, Saori Beppu1, Satoshi Kajio1, Aya Dobashi1, Masaru Kawato2, Yoshihiro Fujiwara2, Hisako Hirayama2 1Faculty of Education and Human Sciences, University of Yamanashi, Kofu, Japan 2Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan Email: *[email protected] Received October 12, 2012; revised November 17, 2012; accepted November 29, 2012 ABSTRACT Dispersal ability and environmental adaptability are profoundly associated with colonization and habitat segregation of deep-sea animals in chemosynthesis-based communities, because deep-sea seeps and vents are patchily distributed and ephemeral. Since these environments are seemingly highly different, it is likely that vent and seep populations must be genetically differentiated by adapting to their respective environments. In order to elucidate dispersal ability and envi- ronmental adaptability of deep-sea mussels, we determined mitochondrial ND4 sequences of Bathymodiolus platifrons and B. japonicus obtained from seeps in the Sagami Bay and vents in the Okinawa Trough. Among more than 20 spe- cies of deep-sea mussels, only three species in the Japanese waters including the above species can inhabit both vents and seeps. We examined phylogenetic relationships, genetic divergences (Fst), gene flow (Nm), and genetic population structures to compare the seep and vent populations. Our results showed no genetic differentiation and extensive gene flow between the seep and vent populations, indicating high dispersal ability of the two species, which favors coloniza- tion in patchy and ephemeral habitats.