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Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
Fruiting Body Form, Not Nutritional Mode, Is the Major Driver of Diversification in Mushroom-Forming Fungi
Fruiting body form, not nutritional mode, is the major driver of diversification in mushroom-forming fungi Marisol Sánchez-Garcíaa,b, Martin Rybergc, Faheema Kalsoom Khanc, Torda Vargad, László G. Nagyd, and David S. Hibbetta,1 aBiology Department, Clark University, Worcester, MA 01610; bUppsala Biocentre, Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, SE-75005 Uppsala, Sweden; cDepartment of Organismal Biology, Evolutionary Biology Centre, Uppsala University, 752 36 Uppsala, Sweden; and dSynthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Center, 6726 Szeged, Hungary Edited by David M. Hillis, The University of Texas at Austin, Austin, TX, and approved October 16, 2020 (received for review December 22, 2019) With ∼36,000 described species, Agaricomycetes are among the and the evolution of enclosed spore-bearing structures. It has most successful groups of Fungi. Agaricomycetes display great di- been hypothesized that the loss of ballistospory is irreversible versity in fruiting body forms and nutritional modes. Most have because it involves a complex suite of anatomical features gen- pileate-stipitate fruiting bodies (with a cap and stalk), but the erating a “surface tension catapult” (8, 11). The effect of gas- group also contains crust-like resupinate fungi, polypores, coral teroid fruiting body forms on diversification rates has been fungi, and gasteroid forms (e.g., puffballs and stinkhorns). Some assessed in Sclerodermatineae, Boletales, Phallomycetidae, and Agaricomycetes enter into ectomycorrhizal symbioses with plants, Lycoperdaceae, where it was found that lineages with this type of while others are decayers (saprotrophs) or pathogens. We constructed morphology have diversified at higher rates than nongasteroid a megaphylogeny of 8,400 species and used it to test the following lineages (12). -
Three New Species of Cortinarius Subgenus Telamonia (Cortinariaceae, Agaricales) from China
A peer-reviewed open-access journal MycoKeys 69: 91–109 (2020) Three new species in Cortinarius from China 91 doi: 10.3897/mycokeys.69.49437 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Three new species of Cortinarius subgenus Telamonia (Cortinariaceae, Agaricales) from China Meng-Le Xie1,2, Tie-Zheng Wei3, Yong-Ping Fu2, Dan Li2, Liang-Liang Qi4, Peng-Jie Xing2, Guo-Hui Cheng5,2, Rui-Qing Ji2, Yu Li2,1 1 Life Science College, Northeast Normal University, Changchun 130024, China 2 Engineering Research Cen- ter of Edible and Medicinal Fungi, Ministry of Education, Jilin Agricultural University, Changchun 130118, China 3 State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China 4 Microbiology Research Institute, Guangxi Academy of Agriculture Sciences, Nanning, 530007, China 5 College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, China Corresponding authors: Rui-Qing Ji ([email protected]), Yu Li ([email protected]) Academic editor: O. Raspé | Received 16 December 2019 | Accepted 23 June 2020 | Published 14 July 2020 Citation: Xie M-L, Wei T-Z, Fu Y-P, Li D, Qi L-L, Xing P-J, Cheng G-H, Ji R-Q, Li Y (2020) Three new species of Cortinarius subgenus Telamonia (Cortinariaceae, Agaricales) from China. MycoKeys 69: 91–109. https://doi. org/10.3897/mycokeys.69.49437 Abstract Cortinarius is an important ectomycorrhizal genus that forms a symbiotic relationship with certain trees, shrubs and herbs. Recently, we began studying Cortinarius in China and here we describe three new spe- cies of Cortinarius subg. Telamonia based on morphological and ecological characteristics, together with phylogenetic analyses. -
A MYCOLEGIUM of LITERATURE the New North America Mushroom Species of 2015 Else C
Cortinarius vanduzerensis, from the type locality in Oregon, unmistakable with its and the species, growing with slimy dark brown cap, Pseudotsuga, Tsuga and Abies in and slimy lilac-purple Oregon, Washington, and British stem, right? Alas, it is Columbia has been described now postulated that this as Cortinarius seidliae. Images species is only known courtesy of M. G. Wood and N. Siegel. A MYCOLEGIUM OF LITERATURE The new North America mushroom species of 2015 Else C. Vellinga round 30 new North American species of macrofungi they are in general very difficult to recognize anyway; without saw the light in 2015 – leaving 2014 as the top year pictures for comparison it is just impossible. with 58 species. In 2015, 14 new Cortinarius species, To speed up the description of new species, several Aan Entoloma, one wax cap, two Russulas, one bolete, several journals now offer the opportunity to publish single species polypores, two Craterellus species, one Geastrum, an descriptions as part of a much bigger article in which many Auricularia, and a number of Tremella species were presented different authors each describe only one or a few new species. as new, plus two Otidea species representing the Ascomycota. Several of the new Cortinarius and Russula species were As in 2014, many of the new taxa were published in Index published as part of these big community efforts. For the Fungorum, without any supporting illustrations and without individual author this is advantageous, as there will be more phylogenetic trees showing the placement of the new species. citations of the whole article than for a single species article. -
Mushrooms Commonly Found in Northwest Washington
MUSHROOMS COMMONLY FOUND IN NORTHWEST WASHINGTON GILLED MUSHROOMS SPORES WHITE Amanita constricta Amanita franchettii (A. aspera) Amanita gemmata Amanita muscaria Amanita pachycolea Amanita pantherina Amanita porphyria Amanita silvicola Amanita smithiana Amanita vaginata Armillaria nabsnona (A. mellea) Armillaria ostoyae (A. mellea) Armillaria sinapina (A. mellea) Calocybe carnea Clitocybe avellaneoalba Clitocybe clavipes Clitocybe dealbata Clitocybe deceptiva Clitocybe dilatata Clitocybe flaccida Clitocybe fragrans Clitocybe gigantean Clitocybe ligula Clitocybe nebularis Clitocybe odora Hygrophoropsis (Clitocybe) aurantiaca Lepista (Clitocybe) inversa Lepista (Clitocybe) irina Lepista (Clitocybe) nuda Gymnopus (Collybia) acervatus Gymnopus (Collybia) confluens Gymnopus (Collybia) dryophila Gymnopus (Collybia) fuscopurpureus Gymnopus (Collybia) peronata Rhodocollybia (Collybia) butyracea Rhodocollybia (Collybia) maculata Strobilurus (Collybia) trullisatus Cystoderma cinnabarinum Cystoderma amianthinum Cystoderma fallax Cystoderma granulosum Flammulina velutipes Hygrocybe (Hygrophorus) conica Hygrocybe (Hygrophorus) minuiatus Hygrophorus bakerensis Hygrophorus camarophyllus Hygrophorus piceae Laccaria amethysteo-occidentalis Laccaria bicolor Laccaria laccata Lactarius alnicola Lactarius deliciousus Lactarius fallax Lactarius kaufmanii Lactarius luculentus Lactarius obscuratus Lactarius occidentalis Lactarius pallescens Lactarius parvis Lactarius pseudomucidus Lactarius pubescens Lactarius repraesentaneus Lactarius rubrilacteus Lactarius -
Diapositiva 1
VII Jornadas Micológicas de Cardenete Ricardo Folgado Bisbal Cardenete, 2 de noviembre de 2013 Carl von Linné (1707-1778) “Species Plantarum II” (1753) Elias Magnus Fries (1794-1878) “Systema Mycologicum” (1821) Los Hongos Reino Fungi Archaea Bacteria Protista Reinos actuales de los seres vivos Fungi Plantae Animalia Linneo Haeckel Chatton Copeland Whittaker Woese et al. Woese et al. Cavalier-Smith 1998 1735 1866 1937 1956 1969 1977 1990 2 imperios 2 reinos 3 reinos 2 imperios 4 reinos 5 reinos 6 reinos 3 dominios y 6 reinos Eubacteria Bacteria Prokaryota Monera Monera Bacteria Archaebacteria Archaea (no tratados) Protista Protozoa Protista Protista Protista Chromista Eukaryota Fungi Fungi Eukarya Fungi Vegetabilia Plantae Plantae Plantae Plantae Plantae Animalia Animalia Animalia Animalia Animalia Animalia Caracteres de los HONGOS • Eucariotas, la mayoría multicelulares. • Heterótrofos que adquieren alimento por absorción. • Pared celular de quitina. • Saprófitos (descomponedores), parásitos o simbiontes (líquenes y micorrizas). • Alrededor de 1,5 millón de especies. • La biología molecular los coloca más cerca de los animales, a partir de un ancestro común en los protistas. Vía de síntesis de la lisina = AAA peridio columela capilicio Esporangio de Etalio de con Mucilago crustacea Leocarpus fragilis esporas estípite hipotalo Esporociste de Cribraria cancellata Los mohos Moho negro del pan Moho blanco Rhizopus nigricans Mucor mucedo Sarcoscypha coccinea Lophodermium pinastri Chlorociboria aeruginascens Plicaria endocarpoides Xanthoria -
Historical Biogeography and Diversification of the Cosmopolitan Ectomycorrhizal Mushroom Family Inocybaceae
Out of the Palaeotropics? Historical biogeography and diversification of the cosmopolitan ectomycorrhizal mushroom family Inocybaceae P. Brandon Matheny1*, M. Catherine Aime2, Neale L. Bougher3, Bart Buyck4, Dennis E. Desjardin5, Egon Horak6, Bradley R. Kropp7, D. Jean Lodge8, Kasem Soytong9, James M. Trappe10 and David S. Hibbett11 ABSTRACT Aim The ectomycorrhizal (ECM) mushroom family Inocybaceae is widespread in north temperate regions, but more than 150 species are encountered in the tropics and the Southern Hemisphere. The relative roles of recent and ancient biogeographical processes, relationships with plant hosts, and the timing of divergences that have shaped the current geographic distribution of the family are investigated. location Africa, Australia, Neotropics, New Zealand, north temperate zone, Palaeotropics, Southeast Asia, South America, south temperate zone. Methods We reconstruct a phylogeny of the Inocybaceae with a geological timeline using a relaxed molecular clock. Divergence dates of lineages are estimated statistically to test vicariance-based hypotheses concerning relatedness of disjunct ECM taxa. A series of internal maximum time constraints is used to evaluate two different calibrations. Ancestral state reconstruction is used to infer ancestral areas and ancestral plant partners of the family. Results The Palaeotropics are unique in containing representatives of all major clades of Inocybaceae. Six of the seven major clades diversified initially during the Cretaceous, with subsequent radiations probably during the early Palaeogene. Vicariance patterns cannot be rejected that involve area relationships for Africa- Australia, Africa-India and southern South America-Australia. Northern and southern South America, Australia and New Zealand are primarily the recipients of immigrant taxa during the Palaeogene or later. Angiosperms were the earliest hosts of Inocybaceae. -
PERSOONIAL R Eflections
Persoonia 23, 2009: 177–208 www.persoonia.org doi:10.3767/003158509X482951 PERSOONIAL R eflections Editorial: Celebrating 50 years of Fungal Biodiversity Research The year 2009 represents the 50th anniversary of Persoonia as the message that without fungi as basal link in the food chain, an international journal of mycology. Since 2008, Persoonia is there will be no biodiversity at all. a full-colour, Open Access journal, and from 2009 onwards, will May the Fungi be with you! also appear in PubMed, which we believe will give our authors even more exposure than that presently achieved via the two Editors-in-Chief: independent online websites, www.IngentaConnect.com, and Prof. dr PW Crous www.persoonia.org. The enclosed free poster depicts the 50 CBS Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT most beautiful fungi published throughout the year. We hope Utrecht, The Netherlands. that the poster acts as further encouragement for students and mycologists to describe and help protect our planet’s fungal Dr ME Noordeloos biodiversity. As 2010 is the international year of biodiversity, we National Herbarium of the Netherlands, Leiden University urge you to prominently display this poster, and help distribute branch, P.O. Box 9514, 2300 RA Leiden, The Netherlands. Book Reviews Mu«enko W, Majewski T, Ruszkiewicz- The Cryphonectriaceae include some Michalska M (eds). 2008. A preliminary of the most important tree pathogens checklist of micromycetes in Poland. in the world. Over the years I have Biodiversity of Poland, Vol. 9. Pp. personally helped collect populations 752; soft cover. Price 74 €. W. Szafer of some species in Africa and South Institute of Botany, Polish Academy America, and have witnessed the of Sciences, Lubicz, Kraków, Poland. -
Loose Ends in the Cortinarius Phylogeny: Five New Myxotelamonoid Species Indicate a High Diversity of These Ectomycorrhizal Fungi with South American Nothofagaceae
life Article Loose Ends in the Cortinarius Phylogeny: Five New Myxotelamonoid Species Indicate a High Diversity of These Ectomycorrhizal Fungi with South American Nothofagaceae María Eugenia Salgado Salomón 1,2,3,* , Carolina Barroetaveña 1,2,3 , Tuula Niskanen 4, Kare Liimatainen 4, Matthew E. Smith 5 and Ursula Peintner 6 1 Centro Forestal CIEFAP, CC 14, Ruta N◦ 259 km 16.24, Esquel 9200, Argentina; [email protected] 2 Universidad Nacional de la Patagonia S.J. Bosco, Esquel Sarmiento 849, Chubut 9200, Argentina 3 Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Godoy Cruz 2290, Buenos Aires 1425, Argentina 4 Jodrell Laboratory, Royal Botanic Gardens, Kew, Surrey TW9 3AB, UK; tuula.niskanen@cortinarius.fi (T.N.); [email protected] (K.L.) 5 Department of Plant Pathology, University of Florida, P.O. Box 110680, Gainesville, FL 32611, USA; trufflesmith@ufl.edu 6 Institute of Microbiology, University Innsbruck, 6020 Innsbruck, Austria; [email protected] * Correspondence: [email protected]; Tel.: +54-2945-453948 Abstract: This paper is a contribution to the current knowledge of taxonomy, ecology and distribution Citation: Salgado Salomón, M.E.; of South American Cortinarius (Pers.) Gray. Cortinarius is among the most widely distributed and Barroetaveña, C.; Niskanen, T.; species-rich basidiomycete genera occurring with South American Nothofagaceae and species are Liimatainen, K.; Smith, M.E.; Peintner, found in many distinct habitats, including shrublands and forests. Due to their ectomycorrhizal role, U. Loose Ends in the Cortinarius Cortinarius species are critical for nutrient cycling in forests, especially at higher latitudes. Some Phylogeny: Five New species have also been reported as edible fungi with high nutritional quality. -
Toxic Fungi of Western North America
Toxic Fungi of Western North America by Thomas J. Duffy, MD Published by MykoWeb (www.mykoweb.com) March, 2008 (Web) August, 2008 (PDF) 2 Toxic Fungi of Western North America Copyright © 2008 by Thomas J. Duffy & Michael G. Wood Toxic Fungi of Western North America 3 Contents Introductory Material ........................................................................................... 7 Dedication ............................................................................................................... 7 Preface .................................................................................................................... 7 Acknowledgements ................................................................................................. 7 An Introduction to Mushrooms & Mushroom Poisoning .............................. 9 Introduction and collection of specimens .............................................................. 9 General overview of mushroom poisonings ......................................................... 10 Ecology and general anatomy of fungi ................................................................ 11 Description and habitat of Amanita phalloides and Amanita ocreata .............. 14 History of Amanita ocreata and Amanita phalloides in the West ..................... 18 The classical history of Amanita phalloides and related species ....................... 20 Mushroom poisoning case registry ...................................................................... 21 “Look-Alike” mushrooms ..................................................................................... -
MUSHROOMS of the OTTAWA NATIONAL FOREST Compiled By
MUSHROOMS OF THE OTTAWA NATIONAL FOREST Compiled by Dana L. Richter, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI for Ottawa National Forest, Ironwood, MI March, 2011 Introduction There are many thousands of fungi in the Ottawa National Forest filling every possible niche imaginable. A remarkable feature of the fungi is that they are ubiquitous! The mushroom is the large spore-producing structure made by certain fungi. Only a relatively small number of all the fungi in the Ottawa forest ecosystem make mushrooms. Some are distinctive and easily identifiable, while others are cryptic and require microscopic and chemical analyses to accurately name. This is a list of some of the most common and obvious mushrooms that can be found in the Ottawa National Forest, including a few that are uncommon or relatively rare. The mushrooms considered here are within the phyla Ascomycetes – the morel and cup fungi, and Basidiomycetes – the toadstool and shelf-like fungi. There are perhaps 2000 to 3000 mushrooms in the Ottawa, and this is simply a guess, since many species have yet to be discovered or named. This number is based on lists of fungi compiled in areas such as the Huron Mountains of northern Michigan (Richter 2008) and in the state of Wisconsin (Parker 2006). The list contains 227 species from several authoritative sources and from the author’s experience teaching, studying and collecting mushrooms in the northern Great Lakes States for the past thirty years. Although comments on edibility of certain species are given, the author neither endorses nor encourages the eating of wild mushrooms except with extreme caution and with the awareness that some mushrooms may cause life-threatening illness or even death. -
Towards a Better Understanding of the Systematics and Diversity Of
CORE Metadata, citation and similar papers at core.ac.uk Provided by Helsingin yliopiston digitaalinen arkisto Towards a better understanding of the systematics and diversity of Cortinarius, with an emphasis on species growing in boreal and temperate zones of Europe and North America Kare Liimatainen Faculty of Biological and Environmental Sciences Department of Biosciences Plant Biology University of Helsinki, Finland Academic dissertation To be presented for public examination with the permission of the Faculty of Biological and Environmental Sciences of the University of Helsinki in Latokartanonkaari 7, B-building, auditorium 4, on 15th Nov 2013 at 12.00. Helsinki 2013 Supervised by Professor Jaakko Hyvönen Department of Biosciences, Plant Biology University of Helsinki, Finland Dr. Tuula Niskanen Department of Biosciences, Plant Biology University of Helsinki, Finland Reviewed by Dr. Kadri Põldmaa Institute of Ecology and Earth Sciences University of Tartu, Estonia Dr. Annu Ruotsalainen Botanical Museum University of Oulu, Finland Examined by Dr. Ursula Peintner Assistant Professor, Institute of Microbiology, Curator of the Mycological Collections University of Innsbruck, Austria © Kare Liimatainen (summary and cover photograph) © The Mycological Society of America (article I, II, and IV) © Pensoft Publishers (article III) © Canadian Science Publishing or its licensors (article V) © Authors (article VI) ISSN 1238–4577 ISBN 978-952-10-9449-1 (paperback) ISBN 978-952-10-9450-7 (PDF) http://ethesis.helsinki.fi Cover photograph: Cortinarius heaven in Fairbanks, Alaska, U.S.A. 2011. One of the still unstudied collections of Cortinarius section Calochroi we made during the extraordinary fruiting season in 2011. Unigrafia, Helsinki 2013 2 Contents Introduction…………………………………………………………………..……………......... 5 The genus Cortinarius……………………………………………………..…………..........