New and Emended Descriptions of Gregarines from Flour Beetles (Tribolium Spp
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University of Oklahoma
UNIVERSITY OF OKLAHOMA GRADUATE COLLEGE MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION SUBMITTED TO THE GRADUATE FACULTY in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY By JOSHUA THOMAS COOPER Norman, Oklahoma 2017 MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION APPROVED FOR THE DEPARTMENT OF MICROBIOLOGY AND PLANT BIOLOGY BY ______________________________ Dr. Boris Wawrik, Chair ______________________________ Dr. J. Phil Gibson ______________________________ Dr. Anne K. Dunn ______________________________ Dr. John Paul Masly ______________________________ Dr. K. David Hambright ii © Copyright by JOSHUA THOMAS COOPER 2017 All Rights Reserved. iii Acknowledgments I would like to thank my two advisors Dr. Boris Wawrik and Dr. J. Phil Gibson for helping me become a better scientist and better educator. I would also like to thank my committee members Dr. Anne K. Dunn, Dr. K. David Hambright, and Dr. J.P. Masly for providing valuable inputs that lead me to carefully consider my research questions. I would also like to thank Dr. J.P. Masly for the opportunity to coauthor a book chapter on the speciation of diatoms. It is still such a privilege that you believed in me and my crazy diatom ideas to form a concise chapter in addition to learn your style of writing has been a benefit to my professional development. I’m also thankful for my first undergraduate research mentor, Dr. Miriam Steinitz-Kannan, now retired from Northern Kentucky University, who was the first to show the amazing wonders of pond scum. Who knew that studying diatoms and algae as an undergraduate would lead me all the way to a Ph.D. -
THE FLOUR BEETLES of the GENUS TRIBOLIUM by NEWELL E
.-;. , I~ 1I111~1a!;! ,I~, ,MICROCOPY RESOLUTION TEST ;CHART MICROCOPY RESOLUTION TEST CHART "NATlqNALBl!REAU PF.STANDARDS-1963-A 'NATIDNALBUREAU .OF STANDARD.S-.l963-A ':s, .' ...... ~~,~~ Technical BuIIetilL No. 498 '~: March: 1936 UNITED STATES DEPARThIENT OF AGRICULTURE WASHINGTON, D. C; THE FLOUR BEETLES OF THE GENUS TRIBOLIUM By NEWELL E. GOOD AssiStant ent()mo{:ofli~t, DiV;-8;.on of Cereal (lnd' Forage 11I_~eot In,l7estigatlo1ts; Bureau: 01 EntomolO!l1f and- Plu.nt Qua.ra-11ti;ne 1 CONTENTS Page lntrodu<:tfol1--___________ 1 .Li.f-e Jjjstory of TribfJli:/I.lIIi c(l-,tanellm SYll()nsm.!es and teennrcu.! descrtptkln;t !lnd T. c'mfu<.tlln'-_____________ 2.1 The egg______________________ 23 ofcles' the of Tribolitlmeconomjeal1y___________ important ~pe-_ The- lu.rviL____________-'__ 25 The- jl:enllB T,:ibolill.ln :lfucLclIY___ Thepnpa____________________ !~4 Key to; the .apede..; of TY~1Jfllif"'''-_ The ailult__________________ 36 Synonymies and: descrlpfions___ Interrelation witll. ot.he~ ullimals___ 44 History and economIc impormncll' ·of ).!edicuJ I:npona1H!e__________• 44 the genu!! TrilloLium________ 12 :Enem!"s. of Tri.ool'i:u:m. ~t:!"",-___ 44. Common: nll:mes________ 12 7'ri1Jolitlnt as a predil.tor____46 PlllceDfstrrhutlOll' pf !,rlgino ________________ of the genu$____-__ 1,1,13 ControlmetlllDrP$_____________ 47 Control in .flOur milL~__________ 47 Historical notes'-..._______ J .. Contrut of donr beetles fn hou!!<',;_ 49 l!D.teriala Wel!ted_________ 20 Summaxy__________________ .49 :Llterat'lre ctted__-_____________ 51 INTRODUCTION Flour and other prepared products frequently become inlested with sma.ll. reddish-brown beetles known as flour beetles. The...o:e beetles~ although very similar in size and a.ppearance, belong to the different though related genera T?ibolium. -
February, 1997
November, 2014 CURRICULUM VITAE Name: John Janovy, Jr. Title: Professor Emeritus, University of Nebraska-Lincoln (Paula and D. B. Varner Distinguished Professor of Biological Sciences) Research Associate, University of Nebraska State Museum Specialty: Protozoology/Parasitology/Parasite Ecology. Address: School of Biological Sciences University of Nebraska-Lincoln Lincoln, Nebraska 68588-0118 [email protected] Tel: 402/472-2754 or 2720 FAX: 402/472-2083 421 Sycamore Drive Lincoln, Nebraska 68510 [email protected] Tel: 402/489-4369 Web Sites: http://www.johnjanovy.com http://talkparasites.blogspot.com http://fridaycoffee.blogspot.com Education: Classen High School, Oklahoma City, Oklahoma; Diploma, June, 1955. University of Oklahoma, Norman; B.S. in Math, June, 1959. University of Oklahoma, Norman; M.S. (Zoology), June, 1962. University of Oklahoma, Norman; Ph.D. (Zoology), June, 1965 Rutgers, New Brunswick, N.J.; Post-Doctoral, 1965-66. Military Service: U.S. Army Active Reserve, 1959-1966 (Artillery, Captain, airborne training, communications) Professional Experience: Director, Cedar Point Biological Station, 1993-1999 Interim Director, University of Nebraska State Museum, 1994-1996 Professor of Biological Sciences, University of Nebraska-Lincoln, August, 1974 - 2011. Director, Cedar Point Biological Station, 1979-1986. Interim Director, University of Nebraska State Museum, 1984-86. janovy14.doc-1 Associate Professor of Zoology, UN-L, 1971-1974. Assistant Dean, College of Arts and Sciences, UN-L, 1970-1972. Assistant Professor of -
An Annotated Bibliography of Archaeoentomology
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Distance Master of Science in Entomology Projects Entomology, Department of 4-2020 An Annotated Bibliography of Archaeoentomology Diana Gallagher Follow this and additional works at: https://digitalcommons.unl.edu/entodistmasters Part of the Entomology Commons This Thesis is brought to you for free and open access by the Entomology, Department of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Distance Master of Science in Entomology Projects by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Diana Gallagher Master’s Project for the M.S. in Entomology An Annotated Bibliography of Archaeoentomology April 2020 Introduction For my Master’s Degree Project, I have undertaken to compile an annotated bibliography of a selection of the current literature on archaeoentomology. While not exhaustive by any means, it is designed to cover the main topics of interest to entomologists and archaeologists working in this odd, dark corner at the intersection of these two disciplines. I have found many obscure works but some publications are not available without a trip to the Royal Society’s library in London or the expenditure of far more funds than I can justify. Still, the goal is to provide in one place, a list, as comprehensive as possible, of the scholarly literature available to a researcher in this area. The main categories are broad but cover the most important subareas of the discipline. Full books are far out-numbered by book chapters and journal articles, although Harry Kenward, well represented here, will be publishing a book in June of 2020 on archaeoentomology. -
Supplementary Figure 1 Multicenter Randomised Control Trial 2746 Randomised
Supplementary Figure 1 Multicenter randomised control trial 2746 randomised 947 control 910 MNP without zinc 889 MNP with zinc 223 lost to follow up 219 lost to follow up 183 lost to follow up 34 refused 29 refused 37 refused 16 died 12 died 9 died 3 excluded 4 excluded 1 excluded 671 in follow-up 646 in follow-up 659 in follow-up at 24mo of age at 24mo of age at 24mo of age Selection for Microbiome sequencing 516 paired samples unavailable 469 paired samples unavailable 497 paired samples unavailable 69 antibiotic use 63 antibiotic use 67 antibiotic use 31 outside of WLZ criteria 37 outside of WLZ criteria 34 outside of WLZ criteria 6 diarrhea last 7 days 2 diarrhea last 7 days 7 diarrhea last 7 days 39 WLZ > -1 at 24 mo 10 WLZ < -2 at 24mo 58 WLZ > -1 at 24 mo 17 WLZ < -2 at 24mo 48 WLZ > -1 at 24 mo 8 WLZ < -2 at 24mo available for selection available for selection available for selection available for selection available for selection1 available for selection1 14 selected 10 selected 15 selected 14 selected 20 selected1 7 selected1 1 Two subjects (one in the reference WLZ group and one undernourished) had, at 12 months, no diarrhea within 1 day of stool collection but reported diarrhea within 7 days prior. Length, cm kg Weight, Supplementary Figure 2. Length (left) and weight (right) z-scores of children recruited into clinical trial NCT00705445 during the first 24 months of life. Median and quantile values are shown, with medians for participants profiled in current study indicated by red (undernourished) and black (reference WLZ) lines. -
Why the –Omic Future of Apicomplexa Should Include Gregarines Julie Boisard, Isabelle Florent
Why the –omic future of Apicomplexa should include Gregarines Julie Boisard, Isabelle Florent To cite this version: Julie Boisard, Isabelle Florent. Why the –omic future of Apicomplexa should include Gregarines. Biology of the Cell, Wiley, 2020, 10.1111/boc.202000006. hal-02553206 HAL Id: hal-02553206 https://hal.archives-ouvertes.fr/hal-02553206 Submitted on 24 Apr 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Article title: Why the –omic future of Apicomplexa should include Gregarines. Names of authors: Julie BOISARD1,2 and Isabelle FLORENT1 Authors affiliations: 1. Molécules de Communication et Adaptation des Microorganismes (MCAM, UMR 7245), Département Adaptations du Vivant (AVIV), Muséum National d’Histoire Naturelle, CNRS, CP52, 57 rue Cuvier 75231 Paris Cedex 05, France. 2. Structure et instabilité des génomes (STRING UMR 7196 CNRS / INSERM U1154), Département Adaptations du vivant (AVIV), Muséum National d'Histoire Naturelle, CP 26, 57 rue Cuvier 75231 Paris Cedex 05, France. Short Title: Gregarines –omics for Apicomplexa studies -
Tracing the Origin of Planktonic Protists in an Ancient Lake
microorganisms Article Tracing the Origin of Planktonic Protists in an Ancient Lake Nataliia V. Annenkova 1,* , Caterina R. Giner 2,3 and Ramiro Logares 2,* 1 Limnological Institute Siberian Branch of the Russian Academy of Sciences 3, Ulan-Batorskaya St., 664033 Irkutsk, Russia 2 Institute of Marine Sciences (ICM), CSIC, Passeig Marítim de la Barceloneta, 37-49, ES08003 Barcelona, Spain; [email protected] 3 Institute for the Oceans and Fisheries, University of British Columbia, 2202 Main Mall, Vancouver, BC V6T 1Z4, Canada * Correspondence: [email protected] (N.V.A.); [email protected] (R.L.) Received: 26 February 2020; Accepted: 7 April 2020; Published: 9 April 2020 Abstract: Ancient lakes are among the most interesting models for evolution studies because their biodiversity is the result of a complex combination of migration and speciation. Here, we investigate the origin of single celled planktonic eukaryotes from the oldest lake in the world—Lake Baikal (Russia). By using 18S rDNA metabarcoding, we recovered 1414 Operational Taxonomic Units (OTUs) belonging to protists populating surface waters (1–50 m) and representing pico/nano-sized cells. The recovered communities resembled other lacustrine freshwater assemblages found elsewhere, especially the taxonomically unclassified protists. However, our results suggest that a fraction of Baikal protists could belong to glacial relicts and have close relationships with marine/brackish species. Moreover, our results suggest that rapid radiation may have occurred among some protist taxa, partially mirroring what was already shown for multicellular organisms in Lake Baikal. We found 16% of the OTUs belonging to potential species flocks in Stramenopiles, Alveolata, Opisthokonta, Archaeplastida, Rhizaria, and Hacrobia. -
Assessing the Efficiency of Molecular Markers for the Species Identification of Gregarines Isolated from the Mealworm and Super Worm Midgut
Microorganisms 2018, 6, 119 1 of 20 Article Assessing the Efficiency of Molecular Markers for the Species Identification of Gregarines Isolated from the Mealworm and Super Worm Midgut Chiara Nocciolini 1, Claudio Cucini 2, Chiara Leo 2, Valeria Francardi 3, Elena Dreassi 4 and Antonio Carapelli 2,* 1 Polo d’Innovazione di Genomica Genetica e Biologia, 53100 Siena, Italy; [email protected] 2 Department of Life Sciences, University of Siena, 53100 Siena, Italy; [email protected] (C.C.); [email protected] (C.L.) 3 Consiglio per la ricerca in agricoltura e analisi dell’economia agraria – Centro di Difesa e Certificazione CREA-DC) Research Centre for Plant Protection and Certification, via di Lanciola 12/A, 50125 Firenze, Italy; [email protected] 4 Department of Biotechnology, Chemistry and Pharmacy, University of Siena, 53100 Siena, Italy; [email protected] * Correspondence: [email protected]; Tel.: +39-0577-234-410 Received: 28 September 2018; Accepted: 23 November 2018; Published: 27 November 2018 Abstract: Protozoa, of the taxon Gregarinasina, are a heterogeneous group of Apicomplexa that includes ~1600 species. They are parasites of a large variety of both marine and terrestrial invertebrates, mainly annelids, arthropods and mollusks. Unlike coccidians and heamosporidians, gregarines have not proven to have a negative effect on human welfare; thus, they have been poorly investigated. This study focuses on the molecular identification and phylogeny of the gregarine species found in the midgut of two insect species that are considered as an alternative source of animal proteins for the human diet: the mealworm Tenebrio molitor, and the super-worm Zophobas atratus (Coleoptera: Tenebrionidae). -
Gregarines (Apicomplexa: Gregarinasina) Are Monoxenous Parasites of Invertebrates
Gregarines (Apicomplexa: Gregarinasina) are monoxenous parasites of invertebrates. Those found in sand flies (Diptera: Psychodidae) and mosquitoes (Diptera: Culicidae) used to be considered a single eugregarine genus Ascogregarina. Our phylogenetic analyses of the gregarine SSU rDNA, including newly obtained sequences of three species from sand flies, showed that mosquito and sand fly gregarines are closely related to neogregarines, and most importantly, they form two disparate monophyletic groups. Based on these molecular features, accompanied by biological differences, we established a new genus Psychodiella for the gregarines from sand flies, reserving the genus Ascogregarina for the mosquito gregarines. In the new genus, two new species Psychodiella sergenti from Phlebotomus sergenti and Psychodiella tobbi from Phlebotomus tobbi were described. They differ in the life cycles (sexual development of Ps. sergenti is triggered by a blood meal intake) and morphology of their life stages, mainly oocysts. The susceptibility of five sand fly species to both gregarines showed their strict host specificity, as they were able to fully develop and complete the life cycle only in their natural hosts. The life cycle of Ps. sergenti was studied in detail using various microscopical methods. Oocysts are attached to the chorion of sand fly eggs. Sporozoites, with a three- layered pellicle and mucron, attach to the 1st instar larval intestine but are never located intracellularly. In the 4th instar larvae, the gregarines occur in the ectoperitrophic space and later in the intestinal lumen. In adults, the parasites appear in the body cavity, and the sexual development of Ps. sergenti takes place only in blood-fed females; gametocysts attach to the accessory glands and oocysts are injected into their lumen. -
STORGARD Insect Identification Poster
® IPM PARTNER® INSECT IDENTIFICATION GUIDE ® Name Photo Size Color Typical Favorite Attracted Geographic Penetrate Product Recommendation (mm) Life Cycle Food to Light Distribution Packages MOTHS Almond Moth 14-20 Gray 25-30 Dried fruit Yes General Yes, Cadra cautella days and grain larvae only STORGARD® II STORGARD® III CIDETRAK® IMM Also available in QUICK-CHANGE™ Also available in QUICK-CHANGE™ (Mating Disruptant) Angoumois 28-35 Yes, Grain Moth 13-17 Buff days Whole grain Yes General larvae only Sitotroga cerealella STORGARD® II STORGARD® III Casemaking 30-60 Wool, natural Yes, Clothes Moth 11 Brownish days fibers and hair Yes General larvae only Tinea pellionella STORGARD® II STORGARD® III European Grain Moth 13-17 White & 90-300 Grain Yes Northern Yes, Nemapogon granellus brown days larvae only STORGARD® II STORGARD® III Copper Indianmeal Moth Broken or 8-10 red & silver 28-35 processed Yes General Yes, Plodia interpunctella days larvae only gray grain STORGARD® II STORGARD® III CIDETRAK® IMM Also available in QUICK-CHANGE™ Also available in QUICK-CHANGE™ (Mating Disruptant) Mediterranean Gray & Flour and Flour Moth 10-15 30-180 processed Yes General Yes, black days larvae only Ephestia kuehniella cereal grain STORGARD® II STORGARD® III CIDETRAK® IMM Also available in QUICK-CHANGE™ Also available in QUICK-CHANGE™ (Mating Disruptant) Raisin Moth Drying and 12-20 Gray 32 days Yes General Yes, dried fruit larvae only Cadra figulilella STORGARD® II STORGARD® III CIDETRAK® IMM Also available in QUICK-CHANGE™ Also available in QUICK-CHANGE™ -
First Description of a Satellite DNA in Manatees' Centromeric Regions
BRIEF RESEARCH REPORT published: 24 August 2021 doi: 10.3389/fgene.2021.694866 First Description of a Satellite DNA in Manatees’ Centromeric Regions Mirela Pelizaro Valeri 1, Guilherme Borges Dias 2, Alice Alves do Espírito Santo 1, Camila Nascimento Moreira 3, Yatiyo Yonenaga-Yassuda 3, Iara Braga Sommer 4, Gustavo C. S. Kuhn 1 and Marta Svartman 1* 1 Laboratório de Citogenômica Evolutiva, Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil, 2 Department of Genetics and Institute of Bioinformatics, University of Georgia, Athens, GA, United States, 3 Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, São Paulo, Brazil, 4 Centro Nacional de Pesquisa e Conservação da Biodiversidade Marinha do Nordeste, Instituto Chico Mendes de Conservação da Biodiversidade, Brasília, Brazil Trichechus manatus and Trichechus inunguis are the two Sirenia species that occur in the Americas. Despite their increasing extinction risk, many aspects of their biology remain understudied, including the repetitive DNA fraction of their genomes. Here we used the sequenced genome of T. manatus and TAREAN to identify satellite DNAs (satDNAs) in this species. We report the first description of TMAsat, a satDNA comprising ~0.87% of Edited by: the genome, with ~684 bp monomers and centromeric localization. In T. inunguis, TMAsat Francisco J. Ruiz-Ruano, showed similar monomer length, chromosome localization and conserved CENP-B University of East Anglia, United Kingdom box-like motifs as in T. manatus. We also detected this satDNA in the Dugong dugon and Reviewed by: in the now extinct Hydrodamalis gigas genomes. -
4 Biology, Behavior, and Ecology of Insects in Processed Commodities
4 Biology, Behavior, and Ecology of Insects in Processed Commodities Rizana M. Mahroof David W. Hagstrum Most insects found in storage facilities consume Red flour beetle, Tribolium commodities, but some feed on mold growing castaneum (Herbst) on stored products. Others may be predators and parasitoids. Insects that attack relatively dry pro- Red flour beetle adults (Figure 1) are reddish brown. cessed commodities (those with about 10% or more Eggs are oblong and white. Adults show little moisture content at 15 to 42oC) can cause signifi- preference for cracks or crevices as oviposition sites. cant weight losses during storage. Insects occur in Eggshells are coated with a sticky substance that aids flour mills, rice mills, feed mills, food processing in attaching the eggs to surfaces and causes small facilities, breakfast and cereal processing facilities, particles to adhere to them (Arbogast 1991). Larvae farm storages, grain bins, grain elevators, bakeries, are yellowish white with three pair of thoracic legs. warehouses, grocery stores, pet-food stores, herbari- ums, museums, and tobacco curing barns. Economic Typically, there are six to seven larval instars, losses attributed to insects include not only weight depending on temperature and nutrition. Larvae loss of the commodity, but also monitoring and pest move away from light, living concealed in the food. management costs and effects of contamination on Full-grown larvae move to the food surface or seek product trade name reputation. shelter for pupation. Pupae are white and exarate, which means that appendages are not fused to the body. External genitalic characters on pupae can be Life Histories used to differentiate males and females (Good 1936).