Description of Aphelenchoides Turnipi N. Sp. and Redescription of A
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ENTO-364 (Introducto
K. K. COLLEGE OF AGRICULTURE, NASHIK DEPARTMENT OF AGRICULTURAL ENTOMOLOGY THEORY NOTES Course No.:- ENTO-364 Course Title: - Introductory Nematology Credits: - 2 (1+1) Compiled By Prof. T. B. Ugale & Prof. A. S. Mochi Assistant Professor Department of Agricultural Entomology 0 Complied by Prof. T. B. Ugale & Prof. A. S. Mochi (K. K. Wagh College of Agriculture, Nashik) TEACHING SCHEDULE Semester : VI Course No. : ENTO-364 Course Title : Introductory Nematology Credits : 2(1+1) Lecture Topics Rating No. 1 Introduction- History of phytonematology and economic 4 importance. 2 General characteristics of plant parasitic nematodes. 2 3 Nematode- General morphology and biology. 4 4 Classification of nematode up to family level with 4 emphasis on group of containing economical importance genera (Taxonomic). 5 Classification of nematode by habitat. 2 6 Identification of economically important plant nematodes 4 up to generic level with the help of key and description. 7 Symptoms caused by nematodes with examples. 4 8 Interaction of nematodes with microorganism 4 9 Different methods of nematode management. 4 10 Cultural methods 4 11 Physical methods 2 12 Biological methods 4 13 Chemical methods 2 14 Entomophilic nematodes- Species Biology 2 15 Mode of action 2 16 Mass production techniques for EPN 2 Reference Books: 1) A Text Book of Plant Nematology – K. D. Upadhay & Kusum Dwivedi, Aman Publishing House 2) Fundamentals of Plant Nematology – E. J. Jonathan, S. Kumar, K. Deviranjan, G. Rajendran, Devi Publications, 8, Couvery Nagar, Karumanolapam, Trichirappalli, 620 001. 3) Plant Nematodes - Methodology, Morphology, Systematics, Biology & Ecology Majeebur Rahman Khan, Department of Plant Protection, Faculty of Agricultural Sciences, Aligarh Muslim University, Aligarh, India. -
PCR-RFLP and Sequencing Analysis of Ribosomal DNA of Bursaphelenchus Nematodes Related to Pine Wilt Disease(L)
Fundam. appl. Nemalol., 1998,21 (6), 655-666 PCR-RFLP and sequencing analysis of ribosomal DNA of Bursaphelenchus nematodes related to pine wilt disease(l) Hideaki IvVAHORI, Kaku TSUDA, Natsumi KANZAKl, Katsura IZUI and Kazuyoshi FUTAI Cmduate School ofAgriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan. Accepted for publication 23 December 1997. Summary -A polymerase chain reaction - restriction fragment polymorphism (PCR-RFLP) analysis was used for the discri mination of isolates of Bursaphelenchus nematode. The isolares of B. xylophilus examined originared from Japan, the United Stares, China, and Canada and the B. mucronatus isolates from Japan, China, and France. Ribosomal DNA containing the 5.8S gene, the internai transcribed spacer region 1 and 2, and partial regions of 18S and 28S gene were amplified by PCR. Digestion of the amplified products of each nematode isolate with twelve restriction endonucleases and examination of resulting RFLP data by cluster analysis revealed a significant gap between B. xylophllus and B. mucronatus. Among the B. xylophilus isolares examined, Japanese pathogenic, Chinese and US isolates were ail identical, whereas Japanese non-pathogenic isolares were slightly distinct and Canadian isolates formed a separate cluster. Among the B. mucronalUS isolates, two Japanese isolares were very similar to each other and another Japanèse and one Chinese isolare were identical to each other. The DNA sequence data revealed 98 differences (nucleotide substitutions or gaps) in 884 bp investigated between B. xylophilus isolare and B. mucronmus isolate; DNA sequence data of Aphelenchus avenae and Aphelenchoides fragariae differed not only from those of Bursaphelenchus nematodes, but also from each other. -
Characterization and Functional Importance of Two Glycoside Hydrolase Family 16 Genes from the Rice White Tip Nematode Aphelenchoides Besseyi
animals Article Characterization and Functional Importance of Two Glycoside Hydrolase Family 16 Genes from the Rice White Tip Nematode Aphelenchoides besseyi Hui Feng , Dongmei Zhou, Paul Daly , Xiaoyu Wang and Lihui Wei * Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, China; [email protected] (H.F.); [email protected] (D.Z.); [email protected] (P.D.); [email protected] (X.W.) * Correspondence: [email protected] Simple Summary: The rice white tip nematode Aphelenchoides besseyi is a plant parasite but can also feed on fungi if this alternative nutrient source is available. Glucans are a major nutrient source found in fungi, and β-linked glucans from fungi can be hydrolyzed by β-glucanases from the glycoside hydrolase family 16 (GH16). The GH16 family is abundant in A. besseyi, but their functions have not been well studied, prompting the analysis of two GH16 members (AbGH16-1 and AbGH16-2). AbGH16-1 and AbGH16-2 are most similar to GH16s from fungi and probably originated from fungi via a horizontal gene transfer event. These two genes are important for feeding on fungi: transcript levels increased when cultured with the fungus Botrytis cinerea, and the purified AbGH16-1 and AbGH16-2 proteins inhibited the growth of B. cinerea. When AbGH16-1 and AbGH16-2 expression A. besseyi was silenced, the reproduction ability of was reduced. These findings have proved for the first time that GH16s contribute to the feeding and reproduction of A. besseyi, which thus provides Citation: Feng, H.; Zhou, D.; Daly, P.; novel insights into how plant-parasitic nematodes can obtain nutrition from sources other than their Wang, X.; Wei, L. -
Reaction of Some Rice Cultivars to the White Tip Nematode, Aphelenchoides Besseyi, Under Field Conditions in the Thrace Region of Turkey
Turkish Journal of Agriculture and Forestry Turk J Agric For (2015) 39: 958-966 http://journals.tubitak.gov.tr/agriculture/ © TÜBİTAK Research Article doi:10.3906/tar-1407-120 Reaction of some rice cultivars to the white tip nematode, Aphelenchoides besseyi, under field conditions in the Thrace region of Turkey 1 2, 1 1 1 1 Adnan TÜLEK , İlker KEPENEKÇİ *, Tuğba Hilal ÇİFTCİGİL , Halil SÜREK , Kemal AKIN , Recep KAYA 1 Thrace Agricultural Research Institute, Edirne, Turkey 2 Department of Plant Protection, Faculty of Agriculture, Gaziosmanpaşa University, Taşlıçiftlik, Tokat, Turkey Received: 21.07.2014 Accepted/Published Online: 06.05.2015 Printed: 30.11.2015 Abstract: The objective of this study was to evaluate the reactions of 41 rice cultivars to Aphelenchoides besseyi under field conditions in 2012 at the Thrace Agricultural Research Institute. The experiments were conducted as split plots in a randomized complete block design with 3 replications. An infected plot and an uninfected control plot were the main plots; the cultivars were subplots. As a sign of nematode damage, white tip infection ratio on the rice caused by nematodes was determined in the experiments, and the losses in yield components for the rice cultivars were calculated. There were decreases both in the grain number per panicle (by 38.3%) and in the panicle weight (by 49.7%) in the infected plot with symptoms of white tip nematode. The Ribe cultivar had the highest yield losses due to nematode damage, with 52.1%. The Asahi cultivar, which is a resistant control, had the lowest yield losses with 7.8%. There was a significant positive correlation (r = 0.5068) between the average chlorophyll values (SPAD) in the flag leaf and average white tip ratio (%). -
JOURNAL of NEMATOLOGY Molecular Identification Of
JOURNAL OF NEMATOLOGY Article | DOI: 10.2130/jofnem-2020-117 e2020-117 | Vol. 52 Molecular identification of Bursaphelenchus cocophilus associated to oil palm (Elaeis guineensis) crops in Tibu (North Santander, Colombia) Greicy Andrea Sarria1,*, Donald Riascos-Ortiz2, Hector Camilo Medina1, Abstract 1 3 Yuri Mestizo , Gerardo Lizarazo The red ring nematode (Bursaphelenchus cocophilus (Cobb) Baujard 1 and Francia Varón De Agudelo 1989) has been registered in oil palm crops in the North, Central 1Pests and Diseases Program, and Eastern zones of Colombia. In Tibu (North Santander), there Cenipalma, Experimental Field are doubts regarding the diagnostic and identity of the disease. Oil Palmar de La Vizcaína, Km 132 palm crops in Tibu with the external and internal symptoms were Vía Puerto Araujo-La Lizama, inspected, and tissue samples were taken from different parts of Barrancabermeja, Santander, the palm. The refrigerated samples were carried to the laboratory of 111611, Colombia. Oleoflores in Tibu for processing. The light microscopy was used for the quantification and morphometric identification of the nematodes. 2 Facultad de Agronomía de Specimens of the nematode were used for DNA extraction, to amplify la Universidad del Pacífico, the segment D2-D3 of the large subunit of ribosomal RNA (28S) Buenaventura, Valle del Cauca, and perform BLAST and a phylogeny study. The most frequently Campus Universitario, Km 13 vía symptoms were chlorosis of the young leaves, thin leaflets, collapsed, al Aeropuerto, Barrio el Triunfo, and dry lower leaves, beginning of roughening, accumulation of Colombia. arrows and short leaves. Bursaphelenchus, was recovered in most 3Extension Unit, Cenipalma, Tibu of the tissues from the samples analyzed: stem, petiole bases, Norte de Santander, 111611, inflorescences, peduncle of bunches, and base of arrows in variable Colombia. -
(Nematoda: Aphelenchoididae) Isolated from Pinus Eldarica in Western Iran
Journal of Nematology 48(1):34–42. 2016. Ó The Society of Nematologists 2016. Molecular and Morphological Characterization of Aphelenchoides fuchsi sp. n. (Nematoda: Aphelenchoididae) Isolated from Pinus eldarica in Western Iran 1 1 2 3 MEHRAB ESMAEILI, RAMIN HEYDARI, MOZHGAN ZIAIE, AND JIANFENG GU Abstract: Aphelenchoides fuchsi sp. n. is described and illustrated from bark and wood samples of a weakened Mondell pine in Ker- manshah Province, western Iran. The new species has body length of 332 to 400 mm (females) and 365 to 395 mm (males). Lip region set off from body contour. The cuticle is weakly annulated, and there are four lines in the lateral field. The stylet is 8 to 10 mmlongand has small basal swellings. The excretory pore is located ca one body diam. posterior to metacorpus valve or 51 to 62 mm from the head. The postuterine sac well developed (60–90 mm). Spicules are relatively short (15–16 mm in dorsal limb) with apex and rostrum rounded, well developed, and the end of the dorsal limb clearly curved ventrad like a hook. The male tail has usual three pairs of caudal papillae (2+2+2) and a well-developed mucro. The female tail is conical, terminating in a complicated step-like projection, usually with many tiny nodular protuberances. The new species belongs to the Group 2 sensu Shahina, category of Aphelenchoides species. Phylo- genetic analysis based on small subunit (SSU) and partial large subunit (LSU) sequences of rRNA supported the morphological results. Key words: Aphelenchoides, LSU, molecular, morphology, morphometrics, new species, phylogeny, SSU, taxonomy. -
Interception and Hot Water Treatment of Mites and Nematodes on Root Crops from the Pacific Islands
Biosecurity 17 Interception and hot water treatment of mites and nematodes on root crops from the Pacific Islands N.E.M. Page-Weir1, L.E. Jamieson1, N.L. Bell2, T.C. Rohan2, A. Chhagan1, G.K. Clare1, A.M. Kean1, V.A. Davis1, M.J. Griffin1 and P.G. Connolly1 1The New Zealand Institute of Plant & Food Research Limited (Plant & Food Research), Private Bag 92169, Auckland 2AgResearch Ltd, Ruakura Research Centre, Private Bag 3123, Hamilton Corresponding author: [email protected] Abstract Root crops are major food crops and export commodities in the South Pacific. However, the presence of mites and nematodes results in rejection or treatment of these crops exported to New Zealand. Current disinfestation methods relying on fumigation result in shorter produce shelf life. This paper summarises the organisms intercepted on root crops from the Pacific Islands and sent for identification in New Zealand, with particular reference to mites and nematodes. Results of a laboratory experiment examining the response of representative mite and nematode species to hot water treatment indicated times of less than 4 min at 48°C or 2 min at 49°C resulted in 99% mortality. The implications of these heat treatments for root crops are discussed. Additionally rearing methods are presented for two mite species: a mould mite and a bulb mite. These species will be relevant for use in future New Zealand and Pacific Island disinfestation studies. Keywords hot water, disinfestation, mites, nematodes, Pacific Islands, root crops. INTRODUCTION Root crops, such as taro, yam, cassava and ginger, The main interceptions on root crops exported are major food crops and export commodities to Australia and New Zealand from the Pacific in the Pacific Islands. -
Nematology Training Manual
NIESA Training Manual NEMATOLOGY TRAINING MANUAL FUNDED BY NIESA and UNIVERSITY OF NAIROBI, CROP PROTECTION DEPARTMENT CONTRIBUTORS: J. Kimenju, Z. Sibanda, H. Talwana and W. Wanjohi 1 NIESA Training Manual CHAPTER 1 TECHNIQUES FOR NEMATODE DIAGNOSIS AND HANDLING Herbert A. L. Talwana Department of Crop Science, Makerere University P. O. Box 7062, Kampala Uganda Section Objectives Going through this section will enrich you with skill to be able to: diagnose nematode problems in the field considering all aspects involved in sampling, extraction and counting of nematodes from soil and plant parts, make permanent mounts, set up and maintain nematode cultures, design experimental set-ups for tests with nematodes Section Content sampling and quantification of nematodes extraction methods for plant-parasitic nematodes, free-living nematodes from soil and plant parts mounting of nematodes, drawing and measuring of nematodes, preparation of nematode inoculum and culturing nematodes, set-up of tests for research with plant-parasitic nematodes, A. Nematode sampling Unlike some pests and diseases, nematodes cannot be monitored by observation in the field. Nematodes must be extracted for microscopic examination in the laboratory. Nematodes can be collected by sampling soil and plant materials. There is no problem in finding nematodes, but getting the species and numbers you want may be trickier. In general, natural and undisturbed habitats will yield greater diversity and more slow-growing nematode species, while temporary and/or disturbed habitats will yield fewer and fast- multiplying species. Sampling considerations Getting nematodes in a sample that truly represent the underlying population at a given time requires due attention to sample size and depth, time and pattern of sampling, and handling and storage of samples. -
Transcriptome Analysis of the Chrysanthemum Foliar Nematode, Aphelenchoides Ritzemabosi (Aphelenchida: Aphelenchoididae)
RESEARCH ARTICLE Transcriptome Analysis of the Chrysanthemum Foliar Nematode, Aphelenchoides ritzemabosi (Aphelenchida: Aphelenchoididae) Yu Xiang☯, Dong-Wei Wang☯, Jun-Yi Li, Hui Xie*, Chun-Ling Xu, Yu Li¤ Laboratory of Plant Nematology and Research Center of Nematodes of Plant Quarantine, Department of Plant Pathology, College of Agriculture, South China Agricultural University, Guangzhou, People's Republic of China a11111 ☯ These authors contributed equally to this work. ¤ Current Address: Department of Plant Pathology, College of Agriculture, South China Agricultural University, Guangzhou, People's Republic of China * [email protected] Abstract OPEN ACCESS Citation: Xiang Y, Wang D-W, Li J-Y, Xie H, Xu C- The chrysanthemum foliar nematode (CFN), Aphelenchoides ritzemabosi, is a plant para- L, Li Y (2016) Transcriptome Analysis of the sitic nematode that attacks many plants. In this study, a transcriptomes of mixed-stage pop- Chrysanthemum Foliar Nematode, Aphelenchoides ulation of CFN was sequenced on the Illumina HiSeq 2000 platform. 68.10 million Illumina ritzemabosi (Aphelenchida: Aphelenchoididae). high quality paired end reads were obtained which generated 26,817 transcripts with a PLoS ONE 11(11): e0166877. doi:10.1371/journal. pone.0166877 mean length of 1,032 bp and an N50 of 1,672 bp, of which 16,467 transcripts were anno- tated against six databases. In total, 20,311 coding region sequences (CDS), 495 simple Editor: John Jones, James Hutton Institute, UNITED KINGDOM sequence repeats (SSRs) and 8,353 single-nucleotide polymorphisms (SNPs) were pre- dicted, respectively. The CFN with the most shared sequences was B. xylophilus with Received: May 17, 2016 16,846 (62.82%) common transcripts and 10,543 (39.31%) CFN transcripts matched Accepted: November 4, 2016 sequences of all of four plant parasitic nematodes compared. -
Research/Investigación Plant-Parasitic Nematodes Associated with Rice In
RESEARCH/INVESTIGACIÓN PLANT-PARASITIC NEMATODES ASSOCIATED WITH RICE IN ECUADOR Carmen Triviño Gilces1*, Daniel Navia Santillán1, and Luis Velasco Velasco1 1Instituto Nacional de Investigaciones Agropecuarias (INIAP), Estación Experimental Litoral Sur, Crops Protectión Department, Box. 09 -017069, Guayaquil, Ecuador. *Corresponding author: carmen.trivino@iniap. gob.ec; [email protected] ABSTRACT Triviño, C., D. Navia-Santillán, and L. Velasco. Plant-parasitic nematodes associated with rice in Ecuador. Nematropica 46:45-53. The aim of this work was to analyze the frequency of occurrence, distribution, and population densities of plant-parasitic nematodes associated with rice in Guayas, Los Ríos, Manabí, El Oro, and Loja provinces, Ecuador. A total of 331 samples of roots and soil and 210 samples of paddy panicles were collected in 46 rice- growing areas. Nematodes were extracted from 10 g roots, 100 cm3 soil, and 100 seeds. The root-knot nematode, Meloidogyne graminicola, occurred at greatest frequency and had the highest population densities both in roots and soil. In irrigated rice plantations, Hirschmanniella oryzae was found most often in rainfed lowland rice, and Pratylenchus spp. were present at greatest frequency. Other nematodes identified in soil samples were species of Helicotylenchus, Criconemoides, and Tylenchorhynchus. Aphelenchoides besseyi was detected in dry seeds collected in the five provinces at varying population densities. Key words: irrigated and rainfed lowland plantation, nematode survey, Oryza sativa, root-knot nematode, white- tip nematode. RESUMEN Triviño, C., D. Navia-Santillán, y L. Velasco. Nematodos fitoparásitos asociados al cultivo de arroz en Ecuador. Nematropica 46:45-53. El objetivo de este trabajo fue analizar la frecuencia de la ocurrencia, distribución y densidad poblacional de nematodos fitoparásitos asociados al cultivo de arroz en las provincias de Guayas, Los Ríos, Manabí, El Oro y Loja, en Ecuador. -
JOURNAL of NEMATOLOGY Description of Aphelenchoides Giblindavisi N
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2018-035 Issue 3 | Vol. 50 (2018) Description of Aphelenchoides giblindavisi n. sp. (Nematoda: Aphelenchoididae), and Proposal for a New Combination Farzad Aliramaji,1 Ebrahim Pourjam,1 Sergio Álvarez-Ortega,2 Farahnaz Jahanshahi Afshar,1,3 and Majid Abstract 1, Pedram * One new and one known species of the genus Aphelenchoides 1Department of Plant Pathology, from Iran are studied. Aphelenchoides giblindavisi n. sp. is mainly Faculty of Agriculture, Tarbiat characterized by having five lines in the lateral fields at mid-body, Modares University, Tehran, Iran. and a single mucro with several tiny nodular protuberances, giving 2 a warty appearance to it, as revealed by detailed scanning electron Departamento de Biología y microscopic (SEM) studies. The new species is further characterized Geología, Física y Química by having a body length of 546 to 795 μ m in females and 523 to 679 μ m Inorgánica, Universidad Rey Juan in males, rounded lip region separated from the rest body by a shallow Carlos, Campus de Móstoles, depression, 10 to 11 μm long stylet with small basal swellings, its 28933-Madrid, España. conus shorter than the shaft (m = 36–43), 52 to 69 µm long postvulval 3Iranian Research Institute of Plant uterine sac (PUS), males with 16 to 18 μ m long arcuate spicules, and Protection, Agricultural Research, three pairs of caudal papillae. The new species was morphologically Education and Extension compared with two species of the genus having five lines in the lateral Organization (AREEO), Tehran, Iran. fields namely A. paramonovi and A. shamimi and species having a warty-surfaced mucro at tail end and similar morphometric data *E-mail: [email protected]. -
Aphelenchoides Besseyi
Bulletin OEPP/EPPO Bulletin (2017) 47 (3), 384–400 ISSN 0250-8052. DOI: 10.1111/epp.12432 European and Mediterranean Plant Protection Organization Organisation Europe´enne et Me´diterrane´enne pour la Protection des Plantes PM 7/39 (2) Diagnostics Diagnostic PM 7/39 (2) Aphelenchoides besseyi Specific scope Specific approval and amendment This Standard describes a diagnostic protocol for Approved in 2003-09. Revised in 2017-04. This revision was Aphelenchoides besseyi. prepared on the basis of the IPPC Diagnostic Protocol This Standard should be used in conjunction with PM adopted in 2016 on Aphelenchoides besseyi, Aphelenchoides 7/76 Use of EPPO diagnostic protocols. fragariae and Aphelenchoides ritzemabosi (Annex 17 to Terms used are those in the EPPO Pictorial Glossary of ISPM 27; IPPC, 2016). The EPPO Diagnostic Protocol only Morphological Terms in Nematology1. covers A. besseyi. It differs in terms of format but it is con- sistent with the content of the IPPC Standard for morphologi- cal identification for this species. With regard to molecular methods, one real-time PCR test available in the region is included as well as DNA barcoding. 1. Introduction 2. Identity The most important host of Aphelenchoides besseyi is Name: Aphelenchoides besseyi Christie 1942 Oryza sativa (rice) and the consequent symptoms of Synonyms: Aphelenchoides oryzae Yokoo 1948 damage have given rise to its common name, white-tip Asteroaphelenchoides besseyi (Christie 1942) Drozdovsky nematode of rice (Franklin & Siddiqi, 1972). 1967 Aphelenchoides besseyi also infests Fragaria species Taxonomic position: Nematoda: Aphelenchida: Aphe- (strawberries), where it is the causal agent of ‘summer lenchina: Aphelenchoididae: Aphelenchoides dwarf’ or ‘crimp’ disease.