CD25 and Protein Phosphatase 2A Cooperate to Enhance IL-2R Signaling in Human Regulatory T Cells

Total Page:16

File Type:pdf, Size:1020Kb

CD25 and Protein Phosphatase 2A Cooperate to Enhance IL-2R Signaling in Human Regulatory T Cells CD25 and Protein Phosphatase 2A Cooperate to Enhance IL-2R Signaling in Human Regulatory T Cells This information is current as Ying Ding, Aixin Yu, George C. Tsokos and Thomas R. of September 30, 2021. Malek J Immunol published online 13 May 2019 http://www.jimmunol.org/content/early/2019/05/10/jimmun ol.1801570 Downloaded from Supplementary http://www.jimmunol.org/content/suppl/2019/05/10/jimmunol.180157 Material 0.DCSupplemental http://www.jimmunol.org/ Why The JI? Submit online. • Rapid Reviews! 30 days* from submission to initial decision • No Triage! Every submission reviewed by practicing scientists • Fast Publication! 4 weeks from acceptance to publication by guest on September 30, 2021 *average Subscription Information about subscribing to The Journal of Immunology is online at: http://jimmunol.org/subscription Permissions Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html Email Alerts Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts The Journal of Immunology is published twice each month by The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2019 by The American Association of Immunologists, Inc. All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. Published May 13, 2019, doi:10.4049/jimmunol.1801570 The Journal of Immunology CD25 and Protein Phosphatase 2A Cooperate to Enhance IL-2R Signaling in Human Regulatory T Cells Ying Ding,* Aixin Yu,* George C. Tsokos,† and Thomas R. Malek*,‡ Low-dose IL-2 therapy is a direct approach to boost regulatory T cells (Tregs) and promote immune tolerance in autoimmune patients. However, the mechanisms responsible for selective response of Tregs to low-dose IL-2 is not fully understood. In this study we directly assessed the contribution of CD25 and protein phosphatase 2A (PP2A) in promoting IL-2R signaling in Tregs. IL-2– induced tyrosine phosphorylation of STAT5 (pSTAT5) was proportional to CD25 levels on human CD4+ T cells and YT human NK cell line, directly demonstrating that CD25 promotes IL-2R signaling. Overexpression of the PP2A catalytic subunit (PP2Ac) by lentiviral transduction in human Tregs increased the level of IL-2R subunits and promoted tyrosine phosphorylation of Jak3 and STAT5. Interestingly, increased expression of CD25 only partially accounted for this enhanced activation of pSTAT5, indicating that PP2A promotes IL-2R signaling through multiple mechanisms. Consistent with these findings, knockdown of PP2Ac in Downloaded from human Tregs and impaired PP2Ac activity in mouse Tregs significantly reduced IL-2–dependent STAT5 activation. In contrast, overexpression or knockdown of PP2Ac in human T effector cells did not affect IL-2–dependent pSTAT5 activation. Overexpres- sion of PP2Ac in human Tregs also increased the expressions of proteins related to survival, activation, and immunosuppressive function, and upregulated several IL-2–regulated genes. Collectively, these findings suggest that CD25 and PP2A cooperatively enhance the responsiveness of Tregs to IL-2, which provide potential therapeutic targets for low-dose IL-2 therapy. The Journal of Immunology, 2019, 203: 000–000. http://www.jimmunol.org/ nterleukin-2 is a key cytokine that promotes immune re- immune system attacks self-tissues (5). Completed clinical trials sponses and is also essential for immune tolerance through its indicate that low-dose IL-2 therapy is safe, increases Tregs in most I action on Foxp3+ regulatory T cells (Tregs) (1). The reali- patients, and is accompanied by clinical benefit in patients with zation that low IL-2R signaling in mice effectively promotes Treg chronic graft-versus-host disease, hepatitis C virus–induced vas- development and homeostasis, but not T effector (Teff) responses culitis, alopecia areata, and systemic lupus erythematosus (6–9). (2), favors the concept that low amounts of IL-2 may selectively Low-dose IL-2 is in a range of 0.5–3 3 106 IU/m2, administered at boost Treg activity in the context of autoimmune diseases. Pre- various frequencies (from daily to biweekly). These levels of IL-2 clinical studies showed that low doses of IL-2 or agonist IL-2/ are ∼30- to 100-fold lower than used in cancer immunotherapy, by guest on September 30, 2021 anti–IL-2 complexes supported immune tolerance in the context of where the goal has been to boost Teff and NK cells. A critical diabetes-prone NOD mice, experimental autoimmune encephalo- aspect of low-dose IL-2 therapy in autoimmunity is that so far myelitis, and allogenic islet transplantation (3, 4). Low-dose IL-2 there has been no indication of activation of autoreactive Teff is now being advanced as a promising therapeutic approach in cells, although sometimes regulatory CD56hi NK cells and eo- patients with autoimmune diseases or other situations in which the sinophils increase (7, 10). IL-2 signaling is initiated by binding of IL-2 to the IL-2R, which is expressed on the cell surface as either the intermediate-affinity *Department of Microbiology and Immunology, Miller School of Medicine, Univer- IL-2R, a dimer of IL-2Rb (CD122) and gc (CD132), or the high- † sity of Miami, Miami, FL 33136; Department of Medicine, Beth Israel Deaconess affinity IL-2R, a trimer of IL-2Ra (CD25), IL- 2Rb and gc (11). Medical Center, Harvard Medical School, Boston, MA 02215; and ‡Diabetes Re- search Institute, Miller School of Medicine, University of Miami, Miami, FL 33136 Because IL-2 can stimulate both Tregs and autoreactive T cells, ORCIDs: 0000-0002-0557-8077 (A.Y.); 0000-0001-9589-2360 (G.C.T.). important considerations to advance this therapy are related to Received for publication November 30, 2018. Accepted for publication April 20, the window of selectivity of low-dose IL-2 toward Tregs and 2019. the mechanisms that impose this selectivity. In this regard, we This work was supported by National Institutes of Health (NIH) Grant R01 AI131648 previously showed that IL-2–dependent STAT5 activation and and the Diabetes Research Institute Foundation (to T.R.M.), and NIH Grants R01 downstream gene activation in human Tregs occurred at ∼10–15- AI068787 and R01 AI136924 (to G.C.T.). and 100-fold lower concentrations of IL-2, respectively, than in Y.D. designed, performed, and analyzed most of the experiments and wrote the CD4+ CD45RO+ T memory (Tm) cells (12), where the latter manuscript; A.Y. performed and analyzed experiments on CD4+ T cells and YT cell line; G.C.T. provided the Ppp2r1aflox/flox mice and edited the manuscript; represents a viable pharmacologic range to target Tregs. These T.R.M. conceived the project, designed the overall study, and wrote the paper. selective responses by human Tregs correlated with their higher Address correspondence and reprint requests to Dr. Thomas R. Malek, Department of expression of CD25 than CD4+ Tm cells (13). Indeed, in vitro Microbiology and Immunology, Miller School of Medicine, University of Miami, fully activated T cells exhibited over a 1000-fold range of re- 1600 NW 10th Avenue, Miami, FL 33136. E-mail address: [email protected] sponse to IL-2 as measured by pSTAT5 activation (13), supporting The online version of this article contains supplemental material. the notion that CD25 levels dictate the sensitivity of their re- Abbreviations used in this article: MFI, mean fluorescence intensity; PP2A, protein phosphatase 2A; PP2Aa, PP2A scaffold subunit; PP2Ac, PP2A catalytic subunit; sponses to IL-2. Nevertheless, in vitro activated human T cells SFM, OpTmizer CTS T cell expansion medium; shRNA, short hairpin RNA; Teff, remain less responsive to IL-2 than human Tregs, even though T effector; TEM, Teff memory; Tm, T memory; Treg, regulatory T cell; YFP, yellow the former expressed higher levels of all IL-2R subunits (12). fluorescent protein. These latter data suggest that other cell intrinsic factors, separate Copyright Ó 2019 by The American Association of Immunologists, Inc. 0022-1767/19/$37.50 from CD25 levels, contribute to the high IL-2 sensitivity of Tregs www.jimmunol.org/cgi/doi/10.4049/jimmunol.1801570 2 CD25 AND PP2A IN IL-2R SIGNALING SENSITIVITY and that assessment of IL-2 responsiveness by a heterogeneous Human CD4+ T cells were enriched by negative selection with the MACS + population of activated T cells may not directly relate to differ- CD4 T Cell Isolation Kit II (Miltenyi Biotec, Auburn, CA). The purified CD4+ T cells were stained and sorted using a BD FACSAria into Tregs ential responses by Tregs and Teff cells. + hi lo + lo hi (CD4 CD25 CD127 ) and Teff memory (TEM) (CD4 CD25 CD127 Protein phosphatase 2A (PP2A) is a ubiquitously expressed, CD45RA2) cells. Sorted cells were typically .90% pure. Tregs were + 2 highly conserved serine/threonine phosphatase that contributes to $85% Foxp3 and TEM cells were $93% Foxp3 . Purified Tregs and Treg function as assessed by Treg-specific knockout of PP2A TEM cells were initially cultured with anti-CD3/CD28 beads (Dynabeads activity (14). PP2A consists of three subunits: a scaffold subunit Human Treg Expander; ThermoFisher Scientific, Vilnius, LT) and human IL-2 (500 U/ml) and then were subcultured with IL-2 (500 U/ml) in (PP2Aa), a catalytic subunit (PP2Ac), and a regulatory subunit OpTmizer CTS T cell expansion medium (designated as SFM) (Life (PP2Ab). The scaffold (a, PPP2R1A and b, PPP2R1B) and cat- Technologies, Grand Island, NY). The anti-CD3/anti-C28/IL-2–activated alytic (a, PPP2CA, and b, PPP2CB) subunits are each encoded by and expanded TEM cells are referred to as Teff cells. two homologous genes, with the a isoform being ∼10-fold more Plasmid construction abundant than the b isoform (15). In contrast, the regulatory subunits are coded by a large variety of genes that are grouped into The lentiviral vector pRRL-sin-cPPT-MCS-IRES-emdGFP (a gift from four families (B, B’, B’’, B’’’) (16).
Recommended publications
  • Deregulated Gene Expression Pathways in Myelodysplastic Syndrome Hematopoietic Stem Cells
    Leukemia (2010) 24, 756–764 & 2010 Macmillan Publishers Limited All rights reserved 0887-6924/10 $32.00 www.nature.com/leu ORIGINAL ARTICLE Deregulated gene expression pathways in myelodysplastic syndrome hematopoietic stem cells A Pellagatti1, M Cazzola2, A Giagounidis3, J Perry1, L Malcovati2, MG Della Porta2,MJa¨dersten4, S Killick5, A Verma6, CJ Norbury7, E Hellstro¨m-Lindberg4, JS Wainscoat1 and J Boultwood1 1LRF Molecular Haematology Unit, NDCLS, John Radcliffe Hospital, Oxford, UK; 2Department of Hematology Oncology, University of Pavia Medical School, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy; 3Medizinische Klinik II, St Johannes Hospital, Duisburg, Germany; 4Division of Hematology, Department of Medicine, Karolinska Institutet, Stockholm, Sweden; 5Department of Haematology, Royal Bournemouth Hospital, Bournemouth, UK; 6Albert Einstein College of Medicine, Bronx, NY, USA and 7Sir William Dunn School of Pathology, University of Oxford, Oxford, UK To gain insight into the molecular pathogenesis of the the World Health Organization.6,7 Patients with refractory myelodysplastic syndromes (MDS), we performed global gene anemia (RA) with or without ringed sideroblasts, according to expression profiling and pathway analysis on the hemato- poietic stem cells (HSC) of 183 MDS patients as compared with the the French–American–British classification, were subdivided HSC of 17 healthy controls. The most significantly deregulated based on the presence or absence of multilineage dysplasia. In pathways in MDS include interferon signaling, thrombopoietin addition, patients with RA with excess blasts (RAEB) were signaling and the Wnt pathways. Among the most signifi- subdivided into two categories, RAEB1 and RAEB2, based on the cantly deregulated gene pathways in early MDS are immuno- percentage of bone marrow blasts.
    [Show full text]
  • PPP2R3C Gene Variants Cause Syndromic 46,XY Gonadal
    5 180 T Guran and others PPP2R3C in testis developmentQ1 180:5 291–309 Clinical Study and spermatogenesis PPP2R3C gene variants cause syndromic 46,XY gonadal dysgenesis and impaired spermatogenesis in humans Tulay Guran1, Gozde Yesil2, Serap Turan1, Zeynep Atay3, Emine Bozkurtlar4, AghaRza Aghayev5, Sinem Gul6, Ilker Tinay7, Basak Aru8, Sema Arslan9, M Kutay Koroglu10, Feriha Ercan10, Gulderen Y Demirel8, Funda S Eren4, Betul Karademir9 and Abdullah Bereket1 1Department of Paediatric Endocrinology and Diabetes, Marmara University, 2Department of Genetics, Bezm-i Alem University, 3Department of Paediatric Endocrinology and Diabetes, Medipol University, 4Department of Pathology, Marmara University, School of Medicine, Istanbul, Turkey, 5Department of Medical Genetics, Istanbul Faculty of Medicine, Istanbul University, Istanbul, Turkey, 6Department of Molecular Biology and Genetics, Gebze Technical University, Kocaeli, Turkey, 7Department of Urology, Marmara University, School of Medicine, Istanbul, Turkey, 8Department of Immunology, Yeditepe Correspondence University, Faculty of Medicine, Istanbul, Turkey, 9Department of Biochemistry, Genetic and Metabolic Diseases should be addressed Research and Investigation Center, and 10Department of Histology and Embryology, Marmara University, School of to T Guran Medicine, Istanbul, Turkey Email [email protected] Abstract Context: Most of the knowledge on the factors involved in human sexual development stems from studies of rare cases with disorders of sex development. Here, we have described a novel 46, XY complete gonadal dysgenesis syndrome caused by homozygous variants in PPP2R3C gene. This gene encodes B″gamma regulatory subunit of the protein phosphatase 2A (PP2A), which is a serine/threonine phosphatase involved in the phospho-regulation processes of most mammalian cell types. PPP2R3C gene is most abundantly expressed in testis in humans, while its function was hitherto unknown.
    [Show full text]
  • 1 Supporting Information for a Microrna Network Regulates
    Supporting Information for A microRNA Network Regulates Expression and Biosynthesis of CFTR and CFTR-ΔF508 Shyam Ramachandrana,b, Philip H. Karpc, Peng Jiangc, Lynda S. Ostedgaardc, Amy E. Walza, John T. Fishere, Shaf Keshavjeeh, Kim A. Lennoxi, Ashley M. Jacobii, Scott D. Rosei, Mark A. Behlkei, Michael J. Welshb,c,d,g, Yi Xingb,c,f, Paul B. McCray Jr.a,b,c Author Affiliations: Department of Pediatricsa, Interdisciplinary Program in Geneticsb, Departments of Internal Medicinec, Molecular Physiology and Biophysicsd, Anatomy and Cell Biologye, Biomedical Engineeringf, Howard Hughes Medical Instituteg, Carver College of Medicine, University of Iowa, Iowa City, IA-52242 Division of Thoracic Surgeryh, Toronto General Hospital, University Health Network, University of Toronto, Toronto, Canada-M5G 2C4 Integrated DNA Technologiesi, Coralville, IA-52241 To whom correspondence should be addressed: Email: [email protected] (M.J.W.); yi- [email protected] (Y.X.); Email: [email protected] (P.B.M.) This PDF file includes: Materials and Methods References Fig. S1. miR-138 regulates SIN3A in a dose-dependent and site-specific manner. Fig. S2. miR-138 regulates endogenous SIN3A protein expression. Fig. S3. miR-138 regulates endogenous CFTR protein expression in Calu-3 cells. Fig. S4. miR-138 regulates endogenous CFTR protein expression in primary human airway epithelia. Fig. S5. miR-138 regulates CFTR expression in HeLa cells. Fig. S6. miR-138 regulates CFTR expression in HEK293T cells. Fig. S7. HeLa cells exhibit CFTR channel activity. Fig. S8. miR-138 improves CFTR processing. Fig. S9. miR-138 improves CFTR-ΔF508 processing. Fig. S10. SIN3A inhibition yields partial rescue of Cl- transport in CF epithelia.
    [Show full text]
  • Aneuploidy: Using Genetic Instability to Preserve a Haploid Genome?
    Health Science Campus FINAL APPROVAL OF DISSERTATION Doctor of Philosophy in Biomedical Science (Cancer Biology) Aneuploidy: Using genetic instability to preserve a haploid genome? Submitted by: Ramona Ramdath In partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biomedical Science Examination Committee Signature/Date Major Advisor: David Allison, M.D., Ph.D. Academic James Trempe, Ph.D. Advisory Committee: David Giovanucci, Ph.D. Randall Ruch, Ph.D. Ronald Mellgren, Ph.D. Senior Associate Dean College of Graduate Studies Michael S. Bisesi, Ph.D. Date of Defense: April 10, 2009 Aneuploidy: Using genetic instability to preserve a haploid genome? Ramona Ramdath University of Toledo, Health Science Campus 2009 Dedication I dedicate this dissertation to my grandfather who died of lung cancer two years ago, but who always instilled in us the value and importance of education. And to my mom and sister, both of whom have been pillars of support and stimulating conversations. To my sister, Rehanna, especially- I hope this inspires you to achieve all that you want to in life, academically and otherwise. ii Acknowledgements As we go through these academic journeys, there are so many along the way that make an impact not only on our work, but on our lives as well, and I would like to say a heartfelt thank you to all of those people: My Committee members- Dr. James Trempe, Dr. David Giovanucchi, Dr. Ronald Mellgren and Dr. Randall Ruch for their guidance, suggestions, support and confidence in me. My major advisor- Dr. David Allison, for his constructive criticism and positive reinforcement.
    [Show full text]
  • Temporal Proteomic Analysis of HIV Infection Reveals Remodelling of The
    1 1 Temporal proteomic analysis of HIV infection reveals 2 remodelling of the host phosphoproteome 3 by lentiviral Vif variants 4 5 Edward JD Greenwood 1,2,*, Nicholas J Matheson1,2,*, Kim Wals1, Dick JH van den Boomen1, 6 Robin Antrobus1, James C Williamson1, Paul J Lehner1,* 7 1. Cambridge Institute for Medical Research, Department of Medicine, University of 8 Cambridge, Cambridge, CB2 0XY, UK. 9 2. These authors contributed equally to this work. 10 *Correspondence: [email protected]; [email protected]; [email protected] 11 12 Abstract 13 Viruses manipulate host factors to enhance their replication and evade cellular restriction. 14 We used multiplex tandem mass tag (TMT)-based whole cell proteomics to perform a 15 comprehensive time course analysis of >6,500 viral and cellular proteins during HIV 16 infection. To enable specific functional predictions, we categorized cellular proteins regulated 17 by HIV according to their patterns of temporal expression. We focussed on proteins depleted 18 with similar kinetics to APOBEC3C, and found the viral accessory protein Vif to be 19 necessary and sufficient for CUL5-dependent proteasomal degradation of all members of the 20 B56 family of regulatory subunits of the key cellular phosphatase PP2A (PPP2R5A-E). 21 Quantitative phosphoproteomic analysis of HIV-infected cells confirmed Vif-dependent 22 hyperphosphorylation of >200 cellular proteins, particularly substrates of the aurora kinases. 23 The ability of Vif to target PPP2R5 subunits is found in primate and non-primate lentiviral 2 24 lineages, and remodeling of the cellular phosphoproteome is therefore a second ancient and 25 conserved Vif function.
    [Show full text]
  • Novelty Indicator for Enhanced Prioritization of Predicted Gene Ontology Annotations
    IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, VOL. X, NO. X, MONTHXXX 20XX 1 Novelty Indicator for Enhanced Prioritization of Predicted Gene Ontology Annotations Davide Chicco, Fernando Palluzzi, and Marco Masseroli Abstract—Biomolecular controlled annotations have become pivotal in computational biology, because they allow scientists to analyze large amounts of biological data to better understand their test results, and to infer new knowledge. Yet, biomolecular annotation databases are incomplete by definition, like our knowledge of biology, and may contain errors and inconsistent information. In this context, machine-learning algorithms able to predict and prioritize new biomolecular annotations are both effective and efficient, especially if compared with the time-consuming trials of biological validation. To limit the possibility that these techniques predict obvious and trivial high-level features, and to help prioritizing their results, we introduce here a new element that can improve the accuracy and relevance of the results of an annotation prediction and prioritization pipeline. We propose a novelty indicator able to state the level of ”newness” (or ”originality”) of the annotations predicted for a specific gene to Gene Ontology terms, and to help prioritizing the most novel and interesting annotations predicted. We performed a thorough biological functional analysis of the prioritized annotations predicted with high accuracy by using this indicator and our previously proposed prediction algorithms. The relevance
    [Show full text]
  • Loss of PPP2R2A Inhibits Homologous Recombination DNA Repair and Predicts
    Author Manuscript Published OnlineFirst on October 18, 2012; DOI: 10.1158/0008-5472.CAN-12-1667 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. Loss of PPP2R2A inhibits homologous recombination DNA repair and predicts tumor sensitivity to PARP inhibition Peter Kalev1, Michal Simicek1, Iria Vazquez1, Sebastian Munck1, Liping Chen2, Thomas Soin1, Natasha Danda1, Wen Chen2 and Anna Sablina1,* 1VIB Center for the Biology of Disease; Center for Human Genetics, KULeuven, Leuven 3000 Belgium 2Department of Toxicology, Faculty of Preventive Medicine, Guangdong Provincial Key Laboratory of Food, Nutrition and Health, School of Public Health, Sun Yat-sen University, Guangzhou 510080, China *Corresponding author information: [email protected] Contact information: Anna A. Sablina, Ph.D. CME Department, KULeuven O&N I Herestraat 49, bus 602 Leuven, Belgium 3000 Tel: +3216330790 Fax: +3216330145 Running title: The role of PPP2R2A in DNA repair Keywords: PP2A, ATM, DNA repair, cancer, PARP inhibition Conflict of interests: The authors claim no conflict of interest. - 1 - Downloaded from cancerres.aacrjournals.org on September 27, 2021. © 2012 American Association for Cancer Research. Author Manuscript Published OnlineFirst on October 18, 2012; DOI: 10.1158/0008-5472.CAN-12-1667 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. Abstract Reversible phosphorylation plays a critical role in DNA repair. Here we report the results of a loss-of-function screen that identifies the PP2A heterotrimeric serine/threonine phosphatases PPP2R2A, PPP2R2D, PPP2R5A and PPP2R3C in double-strand break (DSB) repair. In particular, we found that PPP2R2A-containing complexes directly dephosphorylated ATM at S367, S1893, and S1981 to regulate its retention at DSB sites.
    [Show full text]
  • Patterning and Gastrulation Defects Caused by the Tw18 Lethal Are Due
    © 2017. Published by The Company of Biologists Ltd | Biology Open (2017) 6, 752-764 doi:10.1242/bio.023200 RESEARCH ARTICLE Patterning and gastrulation defects caused by the tw18 lethal are due to loss of Ppp2r1a Lisette Lange1,2,‡, Matthias Marks1,*,‡, Jinhua Liu1, Lars Wittler1, Hermann Bauer1, Sandra Piehl1, Gabriele Bläß1, Bernd Timmermann3 and Bernhard G. Herrmann1,4,§ ABSTRACT t haplotypes, to date only one t lethal, tw5, has been identified and The mouse t haplotype, a variant 20 cM genomic region on characterized at the molecular level (Sugimoto et al., 2012). The t w18 Chromosome 17, harbors 16 embryonic control genes identified by lethal t and related t lethals of the same complementation group 4 9 recessive lethal mutations isolated from wild mouse populations. Due (t , t ) were described about 50 years ago (Bennett and Dunn, 1960; to technical constraints so far only one of these, the tw5 lethal, has Moser and Gluecksohn-Waelsch, 1967). They cause strong been cloned and molecularly characterized. Here we report the gastrulation defects with striking overgrowth of the primitive molecular isolation of the tw18 lethal. Embryos carrying the tw18 lethal streak (PS) and bulging of cells into the amniotic cavity, die from major gastrulation defects commencing with primitive streak commencing on the seventh and prominent on the eighth to ninth formation at E6.5. We have used transcriptome and marker gene day of gestation, followed by embryonic death one day later. In analyses to describe the molecular etiology of the tw18 phenotype. We contrast, normal development requires the ingression of epiblast show that both WNT and Nodal signal transduction are impaired in the cells at the PS, epithelial-to-mesenchymal transition (EMT) and mutant epiblast, causing embryonic patterning defects and failure of migration of single mesodermal cells in between the epiblast and the primitive streak and mesoderm formation.
    [Show full text]
  • Downregulation of Carnitine Acyl-Carnitine Translocase by Mirnas
    Page 1 of 288 Diabetes 1 Downregulation of Carnitine acyl-carnitine translocase by miRNAs 132 and 212 amplifies glucose-stimulated insulin secretion Mufaddal S. Soni1, Mary E. Rabaglia1, Sushant Bhatnagar1, Jin Shang2, Olga Ilkayeva3, Randall Mynatt4, Yun-Ping Zhou2, Eric E. Schadt6, Nancy A.Thornberry2, Deborah M. Muoio5, Mark P. Keller1 and Alan D. Attie1 From the 1Department of Biochemistry, University of Wisconsin, Madison, Wisconsin; 2Department of Metabolic Disorders-Diabetes, Merck Research Laboratories, Rahway, New Jersey; 3Sarah W. Stedman Nutrition and Metabolism Center, Duke Institute of Molecular Physiology, 5Departments of Medicine and Pharmacology and Cancer Biology, Durham, North Carolina. 4Pennington Biomedical Research Center, Louisiana State University system, Baton Rouge, Louisiana; 6Institute for Genomics and Multiscale Biology, Mount Sinai School of Medicine, New York, New York. Corresponding author Alan D. Attie, 543A Biochemistry Addition, 433 Babcock Drive, Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, (608) 262-1372 (Ph), (608) 263-9608 (fax), [email protected]. Running Title: Fatty acyl-carnitines enhance insulin secretion Abstract word count: 163 Main text Word count: 3960 Number of tables: 0 Number of figures: 5 Diabetes Publish Ahead of Print, published online June 26, 2014 Diabetes Page 2 of 288 2 ABSTRACT We previously demonstrated that micro-RNAs 132 and 212 are differentially upregulated in response to obesity in two mouse strains that differ in their susceptibility to obesity-induced diabetes. Here we show the overexpression of micro-RNAs 132 and 212 enhances insulin secretion (IS) in response to glucose and other secretagogues including non-fuel stimuli. We determined that carnitine acyl-carnitine translocase (CACT, Slc25a20) is a direct target of these miRNAs.
    [Show full text]
  • Dema and Faust Et Al., Suppl. Material 2020.02.03
    Supplementary Materials Cyclin-dependent kinase 18 controls trafficking of aquaporin-2 and its abundance through ubiquitin ligase STUB1, which functions as an AKAP Dema Alessandro1,2¶, Dörte Faust1¶, Katina Lazarow3, Marc Wippich3, Martin Neuenschwander3, Kerstin Zühlke1, Andrea Geelhaar1, Tamara Pallien1, Eileen Hallscheidt1, Jenny Eichhorst3, Burkhard Wiesner3, Hana Černecká1, Oliver Popp1, Philipp Mertins1, Gunnar Dittmar1, Jens Peter von Kries3, Enno Klussmann1,4* ¶These authors contributed equally to this work 1Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Robert- Rössle-Strasse 10, 13125 Berlin, Germany 2current address: University of California, San Francisco, 513 Parnassus Avenue, CA 94122 USA 3Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Robert-Rössle-Strasse 10, 13125 Berlin, Germany 4DZHK (German Centre for Cardiovascular Research), Partner Site Berlin, Oudenarder Strasse 16, 13347 Berlin, Germany *Corresponding author Enno Klussmann Max Delbrück Center for Molecular Medicine Berlin in the Helmholtz Association (MDC) Robert-Rössle-Str. 10, 13125 Berlin Germany Tel. +49-30-9406 2596 FAX +49-30-9406 2593 E-mail: [email protected] 1 Content 1. CELL-BASED SCREENING BY AUTOMATED IMMUNOFLUORESCENCE MICROSCOPY 3 1.1 Screening plates 3 1.2 Image analysis using CellProfiler 17 1.4 Identification of siRNA affecting cell viability 18 1.7 Hits 18 2. SUPPLEMENTARY TABLE S4, FIGURES S2-S4 20 2 1. Cell-based screening by automated immunofluorescence microscopy 1.1 Screening plates Table S1. Genes targeted with the Mouse Protein Kinases siRNA sub-library. Genes are sorted by plate and well. Accessions refer to National Center for Biotechnology Information (NCBI, BLA) entries. The siRNAs were arranged on three 384-well microtitre platres.
    [Show full text]
  • Inhibition of Protein Phosphatase 2A Radiosensitizes Pancreatic Cancers by Modulating CDC25C/CDK1 and Homologous Recombination Repair
    Author Manuscript Published OnlineFirst on June 18, 2013; DOI: 10.1158/1078-0432.CCR-13-0788 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. Inhibition of protein phosphatase 2A radiosensitizes pancreatic cancers by modulating CDC25C/CDK1 and homologous recombination repair Dongping Wei1, Leslie A. Parsels2, David Karnak1, Mary A. Davis1, Joshua D. Parsels2, Lili Zhao3, Jonathan Maybaum2, Theodore S. Lawrence1, Yi Sun1, and Meredith A. Morgan1 Department of Radiation Oncology1, Department of Pharmacology2, University of Michigan Medical School; Department of Biostatistics3, University of Michigan Comprehensive Cancer Center, Ann Arbor, MI 48109 Running title: Radiosensitization by PP2A inhibition Grant support: This work was funded by NIH Grants R01CA163895 (to MM), R01CA156744 (to YS), P50CA130810 (to TSL), and an Alfred B. Taubman Scholarship (to TSL). Requests for reprints: Meredith A. Morgan, Department of Radiation Oncology, University of Michigan Medical School, Room 4326B Medical Sciences I, Ann Arbor, MI, 48109-5637, Phone: 734-647-5928, Fax: 734-763-1581, e-mail: [email protected] Disclosure of potential conflicts of interest: None. Acknowledgements: Key words: pancreatic cancer, protein phosphatase 2A, radiosensitization, homologous recombination repair Abbreviations: DSB, DNA double-strand break; RER, radiation enhancement ratio; HRR, homologous recombination repair; IR, ionizing radiation; PBT, Phosphate Buffered Saline with 0.2% Triton X-100; PP2A, protein phosphatase 2A; SF, surviving fraction; TV, tumor volume 1 Downloaded from clincancerres.aacrjournals.org on September 26, 2021. © 2013 American Association for Cancer Research. Author Manuscript Published OnlineFirst on June 18, 2013; DOI: 10.1158/1078-0432.CCR-13-0788 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited.
    [Show full text]
  • Feature Selection for Longitudinal Data by Using Sign Averages to Summarize Gene Expression Values Over Time
    University of Kentucky UKnowledge Biostatistics Faculty Publications Biostatistics 3-19-2019 Feature Selection for Longitudinal Data by Using Sign Averages to Summarize Gene Expression Values over Time Suyan Tian The First Hospital of Jilin University, China, [email protected] Chi Wang University of Kentucky, [email protected] Right click to open a feedback form in a new tab to let us know how this document benefits oy u. Follow this and additional works at: https://uknowledge.uky.edu/biostatistics_facpub Part of the Biostatistics Commons, Computational Biology Commons, Longitudinal Data Analysis and Time Series Commons, and the Microarrays Commons Repository Citation Tian, Suyan and Wang, Chi, "Feature Selection for Longitudinal Data by Using Sign Averages to Summarize Gene Expression Values over Time" (2019). Biostatistics Faculty Publications. 43. https://uknowledge.uky.edu/biostatistics_facpub/43 This Article is brought to you for free and open access by the Biostatistics at UKnowledge. It has been accepted for inclusion in Biostatistics Faculty Publications by an authorized administrator of UKnowledge. For more information, please contact [email protected]. Feature Selection for Longitudinal Data by Using Sign Averages to Summarize Gene Expression Values over Time Notes/Citation Information Published in BioMed Research International, v. 2019, article ID 1724898, p. 1-12. © 2019 Suyan Tian and Chi Wang. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use,
    [Show full text]