Cladistic Analysis of the Cirripedia Thoracica
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Evolutionary History of Inversions in the Direction of Architecture-Driven
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Evolutionary history of inversions in the direction of architecture- driven mutational pressures in crustacean mitochondrial genomes Dong Zhang1,2, Hong Zou1, Jin Zhang3, Gui-Tang Wang1,2*, Ivan Jakovlić3* 1 Key Laboratory of Aquaculture Disease Control, Ministry of Agriculture, and State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China. 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 Bio-Transduction Lab, Wuhan 430075, China * Corresponding authors Short title: Evolutionary history of ORI events in crustaceans Abbreviations: CR: control region, RO: replication of origin, ROI: inversion of the replication of origin, D-I skew: double-inverted skew, LBA: long-branch attraction bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Inversions of the origin of replication (ORI) of mitochondrial genomes produce asymmetrical mutational pressures that can cause artefactual clustering in phylogenetic analyses. It is therefore an absolute prerequisite for all molecular evolution studies that use mitochondrial data to account for ORI events in the evolutionary history of their dataset. -
Larval Development of Shallow Water Barnacles of the Carolinas (Cirripedia
421 NOAA Technical Report Circular 421 OF <•*>" *o, Larval Development of / Shallow Water Barnacles of the Carolinas (Cirripedia: Sr V/ *TES O* Thoracica) With Keys to Naupliar Stages William H. Lang February 1979 U.S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service NOAA TECHNICAL REPORTS National Marine Fisheries Service, Circulars The major responsibilities of the National Marine Fisheries Service (NMFS) are to monitor and assess the abundance and geographic distribution of fishery resources, to understand and predict fluctuations in the quantity and distribution of these resources, and to establish levels for optimum use of the resources. NMFS is also charged with the development and implementation of policies for managing national fishing grounds, development and enforcement of domestic fisheries regulations, surveillance of foreign fishing off United States coastal waters, and the development and enforcement of international fishery agreements and policies. NMFS also assists the fishing industry through marketing service and economic analysis programs, and mortgage insurance and vessel construction subsidies. It collects, analyzes, and publishes statistics on various phases of the industry. The NOAA Technical Report NMFS Circular series continues a series that has been in existence since 1941. The Circulars are technical publications of general interest intended to aid conservation and management. Publications that review in considerable detail and at a high technical level certain broad areas of research appear in this series. Technical papers originating in economics studies and from management in- vestigations appear in the Circular series. NOAA Technical Report NMFS Circulars are available free in limited numbers to governmental agencies, both Federal and State. -
Balanus Glandula Class: Multicrustacea, Hexanauplia, Thecostraca, Cirripedia
Phylum: Arthropoda, Crustacea Balanus glandula Class: Multicrustacea, Hexanauplia, Thecostraca, Cirripedia Order: Thoracica, Sessilia, Balanomorpha Acorn barnacle Family: Balanoidea, Balanidae, Balaninae Description (the plate overlapping plate edges) and radii Size: Up to 3 cm in diameter, but usually (the plate edge marked off from the parietes less than 1.5 cm (Ricketts and Calvin 1971; by a definite change in direction of growth Kozloff 1993). lines) (Fig. 3b) (Newman 2007). The plates Color: Shell usually white, often irregular themselves include the carina, the carinola- and color varies with state of erosion. Cirri teral plates and the compound rostrum (Fig. are black and white (see Plate 11, Kozloff 3). 1993). Opercular Valves: Valves consist of General Morphology: Members of the Cirri- two pairs of movable plates inside the wall, pedia, or barnacles, can be recognized by which close the aperture: the tergum and the their feathery thoracic limbs (called cirri) that scutum (Figs. 3a, 4, 5). are used for feeding. There are six pairs of Scuta: The scuta have pits on cirri in B. glandula (Fig. 1). Sessile barna- either side of a short adductor ridge (Fig. 5), cles are surrounded by a shell that is com- fine growth ridges, and a prominent articular posed of a flat basis attached to the sub- ridge. stratum, a wall formed by several articulated Terga: The terga are the upper, plates (six in Balanus species, Fig. 3) and smaller plate pair and each tergum has a movable opercular valves including terga short spur at its base (Fig. 4), deep crests for and scuta (Newman 2007) (Figs. -
Commercial-In-Confidence
Any use of the Report, use of any part of it, or use of the names NewSouth Global, Expert Opinion Services, University of New South Wales, UNSW, the name of any unit of the University or the name of the Consultant, in direct or in indirect advertising or publicity, is forbidden. COMMERCIAL-IN-CONFIDENCE Report prepared on behalf of NSG Consulting A division of NewSouth Global Pty Limited Ecological issues in relation to BlueScope Steel SCP proposed salt water cooling for CH2M HILL Australia Pty Ltd by Dr Emma Johnston, Dr Jan Carey and Dr Nathan Knott August 2006 J069413 The University of New South Wales, Sydney 2052, DX 957 Sydney Ph: 1800 676 948 Fax: 1800 241 367 www.eos.unsw.edu.au Email: [email protected] CONTENTS Page Executive Summary: ................................................................................................ 1 Introduction............................................................................................................... 3 Predicted Changes in Temperature ........................................................................ 4 Temperature tolerances and preferences of organisms currently found in Port Kembla Harbour........................................................................................................ 9 General temperature effects on major biochemical processes...........................14 Species expected in a slightly to moderately disturbed estuarine system........15 Aspects of current environment that may be excluding species........................17 A review of the influences -
Thoracia, Balanomorpha, Tetraclitidae
Rei'. West. Aust. Mus. 1990, 14(4): 665-668 Occurrence of the barnacle Tesseropora rosea (Krauss) (Thoracica, Balanomorpha, Tetraclitidae) in western Australian waters. Diana S. Jones* Tesseropora rosea was originally described from one specimen collected at Algoa Bay, South Africa (Krauss 1848). Darwin (1854) recorded material from eastern Australia and, after examining the unique South African specimen commented (p. 335) 'There can be no doubt of the identify of the African and Australian specimens. It is a singular circumstance that the same species should occur in these two distant places, and, as far as at present known, not in the intermediate, more tropical coasts'. The species has not been collected either in South Africa, or on the 'intermediate more tropical coasts' since that time. However, as well as eastern Australia, the species is also known from Lord Howe Island and the Kermadec Islands (Endean et al. 1956a, 1956b; Foster 1978; Anderson & Anderson 1985). In eastern Australia T. rosea occurs between lat. 1905 and 380, and has never been recorded from western areas ofthe continent. The species occurs abundantly in exposed coastal areas and on flat rock platforms which are subjected to strong wave action, extending from betweenjust above mean low water neap to mean high water neap tidal levels (Pope 1945; Dakin et al. 1948, 1953; Denley & Underwood 1979; Anderson & Buckle 1983; Anderson & Anderson 1985). In 1986 three live specimens of T. rosea were collected on intertidal granitic rocks at Cottesloe, Western Australia, by Ms L. M. Marsh (WAM crustacean registration number WAM 2347-86). Since 1986 four isolated large individuals of T. -
Hawkesbury Shelf Environmental Background Report
HAWKESBURY SHELF MARINE BIOREGION ASSESSMENT Hawkesbury Shelf environmental background report Background The NSW Marine Estate Management Authority (the Authority) was established by the NSW Government in 2013 to advise on policies, priorities and directions for the NSW marine estate. The NSW marine estate includes marine waters, estuaries and the coast. It extends seaward out to three nautical miles and from the Queensland border in the north to the Victorian border in the south. The full definition and map can be found at www.marine.nsw.gov.au. Contributors The Authority acknowledges the key contributions of officers from the following in preparing this report: • NSW Department of Primary Industries • Office of Environment and Heritage • Transport for NSW • Department of Planning and Environment • Marine Estate Expert Knowledge Panel Published by the NSW Marine Estate Management Authority Hawkesbury Shelf marine bioregion assessment – Hawkesbury Environmental background report First published February 2016 ISBN 978-1-74256-893-5 More information This paper and more information about the Hawkesbury Shelf marine bioregion assessment are available at www.marine.nsw.gov.au. RM8 reference INT15/135530 © State of New South Wales through the Department of Industry, Skills and Regional Development, 2016.This publication is copyright. You may download, display, print and reproduce this material provided that the wording is reproduced exactly, the source is acknowledged, and the copyright, update address and disclaimer notice are retained. To copy, adapt, publish, distribute or commercialise any of this publication you will need to seek permission from the Department of Industry, Skills and Regional Development. Disclaimer: The information contained in this publication is based on knowledge and understanding at the time of writing (February 2016). -
The Marine Biodiversity and Fisheries Catches of the Pitcairn Island Group
The Marine Biodiversity and Fisheries Catches of the Pitcairn Island Group THE MARINE BIODIVERSITY AND FISHERIES CATCHES OF THE PITCAIRN ISLAND GROUP M.L.D. Palomares, D. Chaitanya, S. Harper, D. Zeller and D. Pauly A report prepared for the Global Ocean Legacy project of the Pew Environment Group by the Sea Around Us Project Fisheries Centre The University of British Columbia 2202 Main Mall Vancouver, BC, Canada, V6T 1Z4 TABLE OF CONTENTS FOREWORD ................................................................................................................................................. 2 Daniel Pauly RECONSTRUCTION OF TOTAL MARINE FISHERIES CATCHES FOR THE PITCAIRN ISLANDS (1950-2009) ...................................................................................... 3 Devraj Chaitanya, Sarah Harper and Dirk Zeller DOCUMENTING THE MARINE BIODIVERSITY OF THE PITCAIRN ISLANDS THROUGH FISHBASE AND SEALIFEBASE ..................................................................................... 10 Maria Lourdes D. Palomares, Patricia M. Sorongon, Marianne Pan, Jennifer C. Espedido, Lealde U. Pacres, Arlene Chon and Ace Amarga APPENDICES ............................................................................................................................................... 23 APPENDIX 1: FAO AND RECONSTRUCTED CATCH DATA ......................................................................................... 23 APPENDIX 2: TOTAL RECONSTRUCTED CATCH BY MAJOR TAXA ............................................................................ -
An Annotated Checklist of the Marine Macroinvertebrates of Alaska David T
NOAA Professional Paper NMFS 19 An annotated checklist of the marine macroinvertebrates of Alaska David T. Drumm • Katherine P. Maslenikov Robert Van Syoc • James W. Orr • Robert R. Lauth Duane E. Stevenson • Theodore W. Pietsch November 2016 U.S. Department of Commerce NOAA Professional Penny Pritzker Secretary of Commerce National Oceanic Papers NMFS and Atmospheric Administration Kathryn D. Sullivan Scientific Editor* Administrator Richard Langton National Marine National Marine Fisheries Service Fisheries Service Northeast Fisheries Science Center Maine Field Station Eileen Sobeck 17 Godfrey Drive, Suite 1 Assistant Administrator Orono, Maine 04473 for Fisheries Associate Editor Kathryn Dennis National Marine Fisheries Service Office of Science and Technology Economics and Social Analysis Division 1845 Wasp Blvd., Bldg. 178 Honolulu, Hawaii 96818 Managing Editor Shelley Arenas National Marine Fisheries Service Scientific Publications Office 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service The NOAA Professional Paper NMFS (ISSN 1931-4590) series is pub- lished by the Scientific Publications Of- *Bruce Mundy (PIFSC) was Scientific Editor during the fice, National Marine Fisheries Service, scientific editing and preparation of this report. NOAA, 7600 Sand Point Way NE, Seattle, WA 98115. The Secretary of Commerce has The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original determined that the publication of research reports, taxonomic keys, species synopses, flora and fauna studies, and data- this series is necessary in the transac- intensive reports on investigations in fishery science, engineering, and economics. tion of the public business required by law of this Department. -
Checklist of the Australian Cirripedia
AUSTRALIAN MUSEUM SCIENTIFIC PUBLICATIONS Jones, D. S., J. T. Anderson and D. T. Anderson, 1990. Checklist of the Australian Cirripedia. Technical Reports of the Australian Museum 3: 1–38. [24 August 1990]. doi:10.3853/j.1031-8062.3.1990.76 ISSN 1031-8062 Published by the Australian Museum, Sydney naturenature cultureculture discover discover AustralianAustralian Museum Museum science science is is freely freely accessible accessible online online at at www.australianmuseum.net.au/publications/www.australianmuseum.net.au/publications/ 66 CollegeCollege Street,Street, SydneySydney NSWNSW 2010,2010, AustraliaAustralia ISSN 1031-8062 ISBN 0 7305 7fJ3S 7 Checklist of the Australian Cirripedia D.S. Jones. J.T. Anderson & D.l: Anderson Technical Reports of the AustTalfan Museum Number 3 Technical Reports of the Australian Museum (1990) No. 3 ISSN 1031-8062 Checklist of the Australian Cirripedia D.S. JONES', J.T. ANDERSON*& D.T. AND ER SON^ 'Department of Aquatic Invertebrates. Western Australian Museum, Francis Street. Perth. WA 6000, Australia 2School of Biological Sciences, University of Sydney, Sydney. NSW 2006, Australia ABSTRACT. The occurrence and distribution of thoracican and acrothoracican barnacles in Australian waters are listed for the first time since Darwin (1854). The list comprises 204 species. Depth data and museum collection data (for Australian museums) are given for each species. Geographical occurrence is also listed by area and depth (littoral, neuston, sublittoral or deep). Australian contributions to the biology of Australian cimpedes are summarised in an appendix. All listings are indexed by genus and species. JONES. D.S.. J.T. ANDERSON & D.T. ANDERSON,1990. Checklist of the Australian Cirripedia. -
A BURROWING THORACICAN BARNACLE Lithotrya Dorsalis Is A
/^ Reference: Biol Bull. Ill: 284-298. (June. 1987) THE LARVAL STAGES OF LITHOTRYA DORS ALIS (ELLIS & SOLANDER, 1786): A BURROWING THORACICAN BARNACLE JOSEPH F. DINEEN, JR. Horn Point Environmental Laboratories. Center for Environmental and Esluarine Studies. University of Maryland, Cambridge, Maryland 21613 ABSTRACT Lithotrya dorsalis is a member of the only genus of thoracican barnacles known to burrow and is widely distributed throughout the tropical western Atlantic. It occurs primarily in high energy intertidal environments. L. dorsalis undergoes the typical thoracican larval sequence. Six naupliar stages are followed by the cyprid stage. These larvae were reared in the laboratory and their stages are described for the first time. Newly hatched stage I nauplii are typically 360 ^m in total length; larval size increases to 1100 urn by the 6th instar. The most distinguishing characteristic of Lihtolrya dorsalis nauplii is the presence of unusually long, spinulated posterior shield spines in stages IV through VI. Complete larval development (stage I nauplius to cyprid) averaged 18 days and ranged from 12 to 23 days. Scanning electron micrograph de- scriptions of the cyprid cuticle of this animal, showing a unique striated appearance, are also included. INTRODUCTION First described by Sowerby (1822), the genus Litliotrya (family Scalpellidae, sub- family Lithotryinae) is further treated by Darwin (1851), Sewell ( 1926), Otter (1929), and Cannon (1947). L. dorsalis is considered to be the only species occurring in the western Atlantic (Zevina, 1981). Found exclusively in carbonate substrata, this spe- cies is an abundant and ubiquitous constituent of exposed tropical coastlines (Gins- burg, 1953; Newell et al, 1959; Ahr and Stanton, 1973; Southward, 1975; Focke, 1977; Spivey, 1981). -
Hydrothermal Vent Periphery Invertebrate Community Habitat Preferences of the Lau Basin
California State University, Monterey Bay Digital Commons @ CSUMB Capstone Projects and Master's Theses Capstone Projects and Master's Theses Summer 2020 Hydrothermal Vent Periphery Invertebrate Community Habitat Preferences of the Lau Basin Kenji Jordi Soto California State University, Monterey Bay Follow this and additional works at: https://digitalcommons.csumb.edu/caps_thes_all Recommended Citation Soto, Kenji Jordi, "Hydrothermal Vent Periphery Invertebrate Community Habitat Preferences of the Lau Basin" (2020). Capstone Projects and Master's Theses. 892. https://digitalcommons.csumb.edu/caps_thes_all/892 This Master's Thesis (Open Access) is brought to you for free and open access by the Capstone Projects and Master's Theses at Digital Commons @ CSUMB. It has been accepted for inclusion in Capstone Projects and Master's Theses by an authorized administrator of Digital Commons @ CSUMB. For more information, please contact [email protected]. HYDROTEHRMAL VENT PERIPHERY INVERTEBRATE COMMUNITY HABITAT PREFERENCES OF THE LAU BASIN _______________ A Thesis Presented to the Faculty of Moss Landing Marine Laboratories California State University Monterey Bay _______________ In Partial Fulfillment of the Requirements for the Degree Master of Science in Marine Science _______________ by Kenji Jordi Soto Spring 2020 CALIFORNIA STATE UNIVERSITY MONTEREY BAY The Undersigned Faculty Committee Approves the Thesis of Kenji Jordi Soto: HYDROTHERMAL VENT PERIPHERY INVERTEBRATE COMMUNITY HABITAT PREFERENCES OF THE LAU BASIN _____________________________________________ -
A Checklist of the Barnacles (Crustacea: Cirripedia: Thoracica) of the Persian Gulf and Gulf of Oman with Nine New Records
Zootaxa 3784 (3): 201–223 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3784.3.1 http://zoobank.org/urn:lsid:zoobank.org:pub:0264007A-B68D-49BB-A5EC-41373FF62ED3 A checklist of the barnacles (Crustacea: Cirripedia: Thoracica) of the Persian Gulf and Gulf of Oman with nine new records ADNAN SHAHDADI13, ALIREZA SARI2 & REZA NADERLOO2 Department of Biology, Faculty of Science, University of Hormozgan, Bandarabbas, Iran, Email: [email protected] (corresponding author) School of Biology and Center of Excellence in Phylogeny of Living Organisms, College of Science, University of Tehran, Iran, Emails: [email protected], [email protected] Biologie I, Institut für Zoologie, Universität Regensburg, 93040 Regensburg, Germany Email: [email protected] regensburg.de Abstract The present annotated checklist contains 43 species of thoracican barnacles known to date from the area, 33 and 26 from the Persian Gulf and the Gulf of Oman, respectively. Nine species are new records for the area including Amphibalunus subalbidus (Henry, 1973), Armatobalanus allium (Darwin, 1854), Chelonibia patula (Ranzani, 1818), Conchoderma hunteri (Owen, 1830), Lepas anserifera Linnaeus, 1767, Lithotrya valentiana Reinhardt, 1850, Megabalanus coccopoma (Darwin, 1854), Megabalanus occator (Darwin, 1854) and Platylepas hexastylos (Fabricius, 1798), of which A. subalbi- dus and M. coccopoma are reported as alien species from the region. Key words: Barnacle, Cirripedia, Persian Gulf, Gulf of Oman, Checklist, New records Introduction The classification of the subphylum Crustacea has recently been revised by Ahyong et al. (2011). They included three superorders for the infraclass Cirripedia Burmeister, 1834, namely Acrothoracica Gruvel, 1905 (burrowing barnacles), Rhizocephala Müller, 1862 (parasitic barnacles) and Thoracica Darwin, 1854 (true barnacles).