Volume 14 Issue 2: April. 2013
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Year of the Catfish with the Intention of Writing an Article Relating to Some Aspect of Catfish in the Aquarium on a Monthly Basis
YYeeaarr ooff tthhee CCaattffiisshh A monthly column about Catfish Talking... (Doradidae) by Derek Tustin (Author’s Note: I started The Year of the Catfish with the intention of writing an article relating to some aspect of Catfish in the aquarium on a monthly basis. Last month, April 2013, I did not. I know this caused a bit of consternation on the part of Klaus Steinhaus, the editor of Tank Talk, and he had to find another article to fill the space. As such, I offer both he and the readers of Tank Talk my sincere apologies and to make up for it, give you a double helping of The Year of the Catfish this month. – Derek P.S. Tustin) o you have that one fish species of fish that you have Agamyxis pectinifrons D an unbridled affinity for? That one special species that just strikes a chord with you that you want to keep no matter what? Perhaps something that you have kept every time the opportunity presents? I think we all have a small group of species that no matter how unattractive other aquarists may find them, we want to keep them. I think you all know by now my absolute fascination with rainbowfish, and the extent that I am willing to go to obtain certain species. Given that, you might be surprised to know that my “soft-spot species” isn’t a rainbowfish, but rather a catfish, specifically the White-Spotted Doradid, Agamyxis pectinifrons. (Or it actually might be… but I’ll get to that in a bit.) Agamyxis pectinifrons is a member of the Doradidae family. -
Faculdade De Biociências
FACULDADE DE BIOCIÊNCIAS PROGRAMA DE PÓS-GRADUAÇÃO EM ZOOLOGIA ANÁLISE FILOGENÉTICA DE DORADIDAE (PISCES, SILURIFORMES) Maria Angeles Arce Hernández TESE DE DOUTORADO PONTIFÍCIA UNIVERSIDADE CATÓLICA DO RIO GRANDE DO SUL Av. Ipiranga 6681 - Caixa Postal 1429 Fone: (51) 3320-3500 - Fax: (51) 3339-1564 90619-900 Porto Alegre - RS Brasil 2012 PONTIFÍCIA UNIVERSIDADE CATÓLICA DO RIO GRANDE DO SUL FACULDADE DE BIOCIÊNCIAS PROGRAMA DE PÓS-GRADUAÇÃO EM ZOOLOGIA ANÁLISE FILOGENÉTICA DE DORADIDAE (PISCES, SILURIFORMES) Maria Angeles Arce Hernández Orientador: Dr. Roberto E. Reis TESE DE DOUTORADO PORTO ALEGRE - RS - BRASIL 2012 Aviso A presente tese é parte dos requisitos necessários para obtenção do título de Doutor em Zoologia, e como tal, não deve ser vista como uma publicação no senso do Código Internacional de Nomenclatura Zoológica, apesar de disponível publicamente sem restrições. Dessa forma, quaisquer informações inéditas, opiniões, hipóteses e conceitos novos apresentados aqui não estão disponíveis na literatura zoológica. Pessoas interessadas devem estar cientes de que referências públicas ao conteúdo deste estudo somente devem ser feitas com aprovação prévia do autor. Notice This thesis is presented as partial fulfillment of the dissertation requirement for the Ph.D. degree in Zoology and, as such, is not intended as a publication in the sense of the International Code of Zoological Nomenclature, although available without restrictions. Therefore, any new data, opinions, hypothesis and new concepts expressed hererin are not available -
FAMILY Loricariidae Rafinesque, 1815
FAMILY Loricariidae Rafinesque, 1815 - suckermouth armored catfishes SUBFAMILY Lithogeninae Gosline, 1947 - suckermoth armored catfishes GENUS Lithogenes Eigenmann, 1909 - suckermouth armored catfishes Species Lithogenes valencia Provenzano et al., 2003 - Valencia suckermouth armored catfish Species Lithogenes villosus Eigenmann, 1909 - Potaro suckermouth armored catfish Species Lithogenes wahari Schaefer & Provenzano, 2008 - Cuao suckermouth armored catfish SUBFAMILY Delturinae Armbruster et al., 2006 - armored catfishes GENUS Delturus Eigenmann & Eigenmann, 1889 - armored catfishes [=Carinotus] Species Delturus angulicauda (Steindachner, 1877) - Mucuri armored catfish Species Delturus brevis Reis & Pereira, in Reis et al., 2006 - Aracuai armored catfish Species Delturus carinotus (La Monte, 1933) - Doce armored catfish Species Delturus parahybae Eigenmann & Eigenmann, 1889 - Parahyba armored catfish GENUS Hemipsilichthys Eigenmann & Eigenmann, 1889 - wide-mouthed catfishes [=Upsilodus, Xenomystus] Species Hemipsilichthys gobio (Lütken, 1874) - Parahyba wide-mouthed catfish [=victori] Species Hemipsilichthys nimius Pereira, 2003 - Pereque-Acu wide-mouthed catfish Species Hemipsilichthys papillatus Pereira et al., 2000 - Paraiba wide-mouthed catfish SUBFAMILY Rhinelepinae Armbruster, 2004 - suckermouth catfishes GENUS Pogonopoma Regan, 1904 - suckermouth armored catfishes, sucker catfishes [=Pogonopomoides] Species Pogonopoma obscurum Quevedo & Reis, 2002 - Canoas sucker catfish Species Pogonopoma parahybae (Steindachner, 1877) - Parahyba -
A Draft Genome of the Striped Catfish, Pangasianodon Hypophthalmus, for Comparative Analysis of Genes Relevant to Development An
Kim et al. BMC Genomics (2018) 19:733 https://doi.org/10.1186/s12864-018-5079-x RESEARCHARTICLE Open Access A draft genome of the striped catfish, Pangasianodon hypophthalmus, for comparative analysis of genes relevant to development and a resource for aquaculture improvement Oanh T. P. Kim1*† , Phuong T. Nguyen1†, Eiichi Shoguchi2†, Kanako Hisata2, Thuy T. B. Vo1, Jun Inoue2, Chuya Shinzato2,4, Binh T. N. Le1, Koki Nishitsuji2, Miyuki Kanda3, Vu H. Nguyen1, Hai V. Nong1 and Noriyuki Satoh2* Abstract Background: The striped catfish, Pangasianodon hypophthalmus, is a freshwater and benthopelagic fish common in the Mekong River delta. Catfish constitute a valuable source of dietary protein. Therefore, they are cultured worldwide, and P. hypophthalmus is a food staple in the Mekong area. However, genetic information about the culture stock, is unavailable for breeding improvement, although genetics of the channel catfish, Ictalurus punctatus, has been reported. Toacquiregenomesequencedataasausefulresourcefor marker-assisted breeding, we decoded a draft genome of P. hypophthalmus and performed comparative analyses. Results: Using the Illumina platform, we obtained both nuclear and mitochondrial DNA sequences. Molecular phylogeny using the mitochondrial genome confirmed that P. hypophthalmus is a member of the family Pangasiidae and is nested within a clade including the families Cranoglanididae and Ictaluridae. The nuclear genome was estimated at approximately 700 Mb, assembled into 568 scaffolds with an N50 of 14.29 Mbp, and was estimated to contain ~ 28,600 protein-coding genes, comparable to those of channel catfish and zebrafish. Interestingly, zebrafish produce gadusol, but genes for biosynthesis of this sunscreen compound have been lost from catfish genomes. -
Phylogenetic Relationships of the South American Doradoidea (Ostariophysi: Siluriformes)
Neotropical Ichthyology, 12(3): 451-564, 2014 Copyright © 2014 Sociedade Brasileira de Ictiologia DOI: 10.1590/1982-0224-20120027 Phylogenetic relationships of the South American Doradoidea (Ostariophysi: Siluriformes) José L. O. Birindelli A phylogenetic analysis based on 311 morphological characters is presented for most species of the Doradidae, all genera of the Auchenipteridae, and representatives of 16 other catfish families. The hypothesis that was derived from the six most parsimonious trees support the monophyly of the South American Doradoidea (Doradidae plus Auchenipteridae), as well as the monophyly of the clade Doradoidea plus the African Mochokidae. In addition, the clade with Sisoroidea plus Aspredinidae was considered sister to Doradoidea plus Mochokidae. Within the Auchenipteridae, the results support the monophyly of the Centromochlinae and Auchenipterinae. The latter is composed of Tocantinsia, and four monophyletic units, two small with Asterophysus and Liosomadoras, and Pseudotatia and Pseudauchenipterus, respectively, and two large ones with the remaining genera. Within the Doradidae, parsimony analysis recovered Wertheimeria as sister to Kalyptodoras, composing a clade sister to all remaining doradids, which include Franciscodoras and two monophyletic groups: Astrodoradinae (plus Acanthodoras and Agamyxis) and Doradinae (new arrangement). Wertheimerinae, new subfamily, is described for Kalyptodoras and Wertheimeria. Doradinae is corroborated as monophyletic and composed of four groups, one including Centrochir and Platydoras, the other with the large-size species of doradids (except Oxydoras), another with Orinocodoras, Rhinodoras, and Rhynchodoras, and another with Oxydoras plus all the fimbriate-barbel doradids. Based on the results, the species of Opsodoras are included in Hemidoras; and Tenellus, new genus, is described to include Nemadoras trimaculatus, N. -
Multilocus Molecular Phylogeny of the Suckermouth Armored Catfishes
Molecular Phylogenetics and Evolution xxx (2014) xxx–xxx Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Multilocus molecular phylogeny of the suckermouth armored catfishes (Siluriformes: Loricariidae) with a focus on subfamily Hypostominae ⇑ Nathan K. Lujan a,b, , Jonathan W. Armbruster c, Nathan R. Lovejoy d, Hernán López-Fernández a,b a Department of Natural History, Royal Ontario Museum, 100 Queen’s Park, Toronto, Ontario M5S 2C6, Canada b Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario M5S 3B2, Canada c Department of Biological Sciences, Auburn University, Auburn, AL 36849, USA d Department of Biological Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada article info abstract Article history: The Neotropical catfish family Loricariidae is the fifth most species-rich vertebrate family on Earth, with Received 4 July 2014 over 800 valid species. The Hypostominae is its most species-rich, geographically widespread, and eco- Revised 15 August 2014 morphologically diverse subfamily. Here, we provide a comprehensive molecular phylogenetic reap- Accepted 20 August 2014 praisal of genus-level relationships in the Hypostominae based on our sequencing and analysis of two Available online xxxx mitochondrial and three nuclear loci (4293 bp total). Our most striking large-scale systematic discovery was that the tribe Hypostomini, which has traditionally been recognized as sister to tribe Ancistrini based Keywords: on morphological data, was nested within Ancistrini. This required recognition of seven additional tribe- Neotropics level clades: the Chaetostoma Clade, the Pseudancistrus Clade, the Lithoxus Clade, the ‘Pseudancistrus’ Guiana Shield Andes Mountains Clade, the Acanthicus Clade, the Hemiancistrus Clade, and the Peckoltia Clade. -
Chaetostoma Milesi) Ecological Risk Screening Summary
Spotted Rubbernose Pleco (Chaetostoma milesi) Ecological Risk Screening Summary U.S. Fish & Wildlife Service, March 2014 Revised, November 2016, November 2017 Web Version, 9/10/2018 Photo: Frank Alvarez. Licensed under Creative Commons BY 3.0. Available: http://www.fishbase.org/photos/UploadedBy.php?autoctr=9310&win=uploaded. (March 31, 2014). 1 Native Range and Status in the United States Native Range From Froese and Pauly (2017): “South America: Magdalena and Apuré River basins.” From Ballen et al. (2016): “The new species [Chaetostoma joropo] has been long confused with Chaetostoma milesi, a species with similar overall morphology and color pattern that is restricted to the Magdalena- Cauca River Basin.” 1 Status in the United States No records of Chaetostoma milesi in the wild or in trade United States were found. Means of Introductions in the United States No records of Chaetostoma milesi in the United States were found. Remarks From Ballen et al. (2016): “The new species [Chaetostoma joropo] has been long confused with Chaetostoma milesi, a species with similar overall morphology and color pattern that is restricted to the Magdalena- Cauca River Basin.” 2 Biology and Ecology Taxonomic Hierarchy and Taxonomic Standing According to Eschmeyer et al. (2017), Chaetostoma milesi Fowler 1941 is the valid name for this species. It is also the original name. From ITIS (2013): “Kingdom Animalia Subkingdom Bilateria Infrakingdom Deuterostomia Phylum Chordata Subphylum Vertebrata Infraphylum Gnathostomata Superclass Osteichthyes Class Actinopterygii -
Summary Report of Freshwater Nonindigenous Aquatic Species in U.S
Summary Report of Freshwater Nonindigenous Aquatic Species in U.S. Fish and Wildlife Service Region 4—An Update April 2013 Prepared by: Pam L. Fuller, Amy J. Benson, and Matthew J. Cannister U.S. Geological Survey Southeast Ecological Science Center Gainesville, Florida Prepared for: U.S. Fish and Wildlife Service Southeast Region Atlanta, Georgia Cover Photos: Silver Carp, Hypophthalmichthys molitrix – Auburn University Giant Applesnail, Pomacea maculata – David Knott Straightedge Crayfish, Procambarus hayi – U.S. Forest Service i Table of Contents Table of Contents ...................................................................................................................................... ii List of Figures ............................................................................................................................................ v List of Tables ............................................................................................................................................ vi INTRODUCTION ............................................................................................................................................. 1 Overview of Region 4 Introductions Since 2000 ....................................................................................... 1 Format of Species Accounts ...................................................................................................................... 2 Explanation of Maps ................................................................................................................................ -
Platydoras Costatus (Raphael Catfish) Ecological Risk Screening Summary
Raphael Catfish (Platydoras costatus) Ecological Risk Screening Summary U.S. Fish and Wildlife Service, February 2011 Revised, July 2018 Web Version, 9/20/2019 Photo: Erling Holm, via FishWise Professional. Licensed under Creative Commons BY-NC-SA. Available: http://eol.org/data_objects/24181426. (July 2018). 1 Native Range and Status in the United States Native Range From Nico et al. (2018): “South America, from Venezuela and the Guianas to Argentina (Robins et al. 1991), including the Amazon, Tocantins, Parnaíba, Orinoco, and Essequibo River basins and coastal drainages in French Guiana and Suriname.” From Piorski et al. (2008): “[…] coastal drainages of Suriname and French Guiana […]” 1 From Eschmeyer et al. (2018): “Distribution: Amazon, Tocantins, Parnaíba, Orinoco and Essequibo River basins and coastal drainages in French Guiana and Suriname: Bolivia, Brazil, Ecuador, ?Colombia, French Guiana, Guyana, Peru, Suriname and Venezuela. But perhaps only coastal drainages of Suriname and French Guiana.” Conflicting descriptions of the distribution of P. costatus are apparent in the quotations above. In this ERSS, the broader definition is used because most information available refers to this definition of the species range. Status in the United States From Nico et al. (2018): “Reported from Florida and Texas. Likely failed introduction: there have been no additional specimens or reports since initial sightings.” Nico et al. (2018) report that the record from Florida dates to 1984 and the record from Texas dates to 1999. VertNet (2018) reports an occurrence in May 2002 in New Mexico: “Caught 15 May 2002 by Frank Jimenez of Tesuque […] at Santa Cruz Lake, Santa Fe Co. with a net as it was swimming near shoreline.” The frequency of this species in trade is unclear (see Remarks). -
Siluriformes: Loricariidae) from the Western Guiana Shield
Copeia 2011, No. 2, 216–225 Two New Genera and Species of Ancistrini (Siluriformes: Loricariidae) from the Western Guiana Shield Nathan K. Lujan1,2 and Jonathan W. Armbruster1 Two new ancistrin genera and species are described from main channels and tributaries of the upper Orinoco River in Amazonas, Venezuela. Micracanthicus vandragti is black with white spots and distinguished by its small body-size, large gas-bladder capsules, and highly protrusible mandibles with short tooth cups and five to eight long teeth per tooth cup. The known range of Micracanthicus vandragti is restricted to the lower Ventuari River and portions of the Orinoco River near its rocky, anastomose confluence with the Ventuari River. Soromonichthys stearleyi is green with small yellow-gold spots on the head and thin vertical bars on the body and has long dentary and premaxillary tooth cups with 39–69 teeth per tooth cup. It is distinguished by its coloration and by its unique pattern of plate loss on the snout: plates absent from mesethmoid surface and anteriormost margin of snout. Soromonichthys stearleyi is known only from Soromoni Creek, a northern tributary of the upper Orinoco draining southern slopes of Mount Duida. NGOING ichthyological inventories of the upper process of Weberian complex perforated distally with large Orinoco Basin in Amazonas, Venezuela, by the first foramina (vs. not or only mildly perforated distally); O author and colleagues have yielded many new and branched anal-fin rays five (vs. four); coracoid posterior interesting suckermouth armored catfishes (Loricariidae; process elongated, thin, pointed (vs. distal end about as wide Lujan et al., 2007, 2009; Lujan, 2008). -
A Rapid Biological Assessment of the Upper Palumeu River Watershed (Grensgebergte and Kasikasima) of Southeastern Suriname
Rapid Assessment Program A Rapid Biological Assessment of the Upper Palumeu River Watershed (Grensgebergte and Kasikasima) of Southeastern Suriname Editors: Leeanne E. Alonso and Trond H. Larsen 67 CONSERVATION INTERNATIONAL - SURINAME CONSERVATION INTERNATIONAL GLOBAL WILDLIFE CONSERVATION ANTON DE KOM UNIVERSITY OF SURINAME THE SURINAME FOREST SERVICE (LBB) NATURE CONSERVATION DIVISION (NB) FOUNDATION FOR FOREST MANAGEMENT AND PRODUCTION CONTROL (SBB) SURINAME CONSERVATION FOUNDATION THE HARBERS FAMILY FOUNDATION Rapid Assessment Program A Rapid Biological Assessment of the Upper Palumeu River Watershed RAP (Grensgebergte and Kasikasima) of Southeastern Suriname Bulletin of Biological Assessment 67 Editors: Leeanne E. Alonso and Trond H. Larsen CONSERVATION INTERNATIONAL - SURINAME CONSERVATION INTERNATIONAL GLOBAL WILDLIFE CONSERVATION ANTON DE KOM UNIVERSITY OF SURINAME THE SURINAME FOREST SERVICE (LBB) NATURE CONSERVATION DIVISION (NB) FOUNDATION FOR FOREST MANAGEMENT AND PRODUCTION CONTROL (SBB) SURINAME CONSERVATION FOUNDATION THE HARBERS FAMILY FOUNDATION The RAP Bulletin of Biological Assessment is published by: Conservation International 2011 Crystal Drive, Suite 500 Arlington, VA USA 22202 Tel : +1 703-341-2400 www.conservation.org Cover photos: The RAP team surveyed the Grensgebergte Mountains and Upper Palumeu Watershed, as well as the Middle Palumeu River and Kasikasima Mountains visible here. Freshwater resources originating here are vital for all of Suriname. (T. Larsen) Glass frogs (Hyalinobatrachium cf. taylori) lay their -
Is Diet Correlated with Feeding Morphology in Neotropical Suckermouth Armoured Catfishes (Siluriformes: Loricariidae)?
Is Diet Correlated with Feeding Morphology in Neotropical Suckermouth Armoured Catfishes (Siluriformes: Loricariidae)? by Stéphanie L. Lefebvre A thesis submitted in conformity with the requirements for the degree of Masters of Science Ecology and Evolutionary Biology University of Toronto © Copyright by Stephanie L. Lefebvre 2014 Is Diet Correlated with Feeding Morphology in Neotropical Suckermouth Armoured Catfishes (Siluriformes: Loricariidae)? Stéphanie L. Lefebvre Masters of Science Ecology and Evolutionary Biology University of Toronto 2014 Abstract The suckermouth armoured catfishes (Siluriformes: Loricariidae) are a diverse group of predominantly detritivorous fishes inhabiting rivers of South and Central America. Their distinct jaws are specialized for scraping a wide range of substrate. Though it is hypothesized that specialization of loricariid feeding morphology may have played a role in their diversification, little is known about the ecological and evolutionary processes involved. The present study quantifies variation in jaw functional traits and body morphology in a phylogenetic context. Morphological variation was compared to species’ relative position in assemblage isotope space (for both δ13C and δ15N) to test for correlations between diet and feeding morphology. Results show that although jaw functional traits are decoupled from body morphology, both are correlated with δ13C values. Partitioning of terrestrial and aquatic resources can be explained by both jaw functional traits and body morphology, however further partitioning of diet is only attributed to the former. ii Acknowledgements I would like to thank Nathan K. Lujan for providing isotope and jaw data, along with a wealth of information about loricariids, and for organizing the provision of specimens from both the Auburn University Museum Fish Collection (AUM) and the Academy of Natural Sciences of Philadelphia (ANSP).