Vibriosis and Aeromonas Infection in Shrimp: Isolation, Sequencing, and Control
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Bacterial Soft Tissue Infections Following Water Exposure
CHAPTER 23 Bacterial Soft Tissue Infections Following Water Exposure Sara E. Lewis, DPM Devin W. Collins, BA Adam M. Bressler, MD INTRODUCTION to early generation penicillins and cephalosporins. Thus, standard treatments include fluoroquinolones (ciprofloxacin, Soft tissue infections following water exposure are relatively levofloxacin), third and fourth generation cephalosporins uncommon but can result in high morbidity and mortality. (ceftazidime, cefepime), or potentially trimethoprim-sulfa These infections can follow fresh, salt, and brackish water (4). However, due to the potential of emerging resistance exposure and most commonly occur secondary to trauma. seen in Aeromonas species, susceptibilities should always be Although there are numerous microorganisms that can performed and antibiotics adjusted accordingly (3). It is cause skin and soft tissue infections following water important to maintain a high index of suspicion for Aeromonas exposure, this article will focus on the 5 most common infections after water exposure in fresh and brackish water bacteria. The acronym used for these bacteria--AEEVM, and to start the patient on an appropriate empiric antibiotic refers to Aeromonas species, Edwardsiella tarda, Erysipelothrix regimen immediately. rhusiopathiae, Vibrio vulnificus, and Mycobacterium marinum. EDWARDSIELLA TARDA AEROMONAS Edwardsiella tarda is part of the Enterobacteriaceae family. Aeromonas species are gram-negative rods found worldwide in It is a motile, facultative anaerobic gram-negative rod fresh and brackish water (1-3). They have also been found in that can be found worldwide in pond water, mud, and contaminated drinking, surface, and polluted water sources the intestines of marine life and land animals (5). Risk (3). Aeromonas are usually non-lactose fermenting, oxidase factors for infection include water exposure, exposure positive facultative anaerobes. -
WO 2014/134709 Al 12 September 2014 (12.09.2014) P O P C T
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2014/134709 Al 12 September 2014 (12.09.2014) P O P C T (51) International Patent Classification: (81) Designated States (unless otherwise indicated, for every A61K 31/05 (2006.01) A61P 31/02 (2006.01) kind of national protection available): AE, AG, AL, AM, AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, (21) International Application Number: BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DK, DM, PCT/CA20 14/000 174 DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, (22) International Filing Date: HN, HR, HU, ID, IL, IN, IR, IS, JP, KE, KG, KN, KP, KR, 4 March 2014 (04.03.2014) KZ, LA, LC, LK, LR, LS, LT, LU, LY, MA, MD, ME, MG, MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, (25) Filing Language: English OM, PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, (26) Publication Language: English SC, SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, (30) Priority Data: ZW. 13/790,91 1 8 March 2013 (08.03.2013) US (84) Designated States (unless otherwise indicated, for every (71) Applicant: LABORATOIRE M2 [CA/CA]; 4005-A, rue kind of regional protection available): ARIPO (BW, GH, de la Garlock, Sherbrooke, Quebec J1L 1W9 (CA). GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, SZ, TZ, UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, TJ, (72) Inventors: LEMIRE, Gaetan; 6505, rue de la fougere, TM), European (AL, AT, BE, BG, CH, CY, CZ, DE, DK, Sherbrooke, Quebec JIN 3W3 (CA). -
Delineation of Aeromonas Hydrophila Pathotypes by Dectection of Putative Virulence Factors Using Polymerase Chain Reaction and N
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by DigitalCommons@Kennesaw State University Kennesaw State University DigitalCommons@Kennesaw State University Master of Science in Integrative Biology Theses Biology & Physics Summer 7-20-2015 Delineation of Aeromonas hydrophila Pathotypes by Dectection of Putative Virulence Factors using Polymerase Chain Reaction and Nematode Challenge Assay John Metz Kennesaw State University, [email protected] Follow this and additional works at: http://digitalcommons.kennesaw.edu/integrbiol_etd Part of the Integrative Biology Commons Recommended Citation Metz, John, "Delineation of Aeromonas hydrophila Pathotypes by Dectection of Putative Virulence Factors using Polymerase Chain Reaction and Nematode Challenge Assay" (2015). Master of Science in Integrative Biology Theses. Paper 7. This Thesis is brought to you for free and open access by the Biology & Physics at DigitalCommons@Kennesaw State University. It has been accepted for inclusion in Master of Science in Integrative Biology Theses by an authorized administrator of DigitalCommons@Kennesaw State University. For more information, please contact [email protected]. Delineation of Aeromonas hydrophila Pathotypes by Detection of Putative Virulence Factors using Polymerase Chain Reaction and Nematode Challenge Assay John Michael Metz Submitted in partial fulfillment of the requirements for the Master of Science Degree in Integrative Biology Thesis Advisor: Donald J. McGarey, Ph.D Department of Molecular and Cellular Biology Kennesaw State University ABSTRACT Aeromonas hydrophila is a Gram-negative, bacterial pathogen of humans and other vertebrates. Human diseases caused by A. hydrophila range from mild gastroenteritis to soft tissue infections including cellulitis and acute necrotizing fasciitis. When seen in fish it causes dermal ulcers and fatal septicemia, which are detrimental to aquaculture stocks and has major economic impact to the industry. -
Retrospective Study of Aeromonas Infection in a Malaysian Urban Area: a 10-Year Experience W S Lee, S D Puthucheary
Singapore Med J 2001 Vol 42(2) : 057-060 Original Article Retrospective Study of Aeromonas Infection in a Malaysian Urban Area: A 10-year Experience W S Lee, S D Puthucheary ABSTRACT Keywords: Aeromonas, gastroenteritis, childhood Aims: To describe the patterns of isolation of Singapore Med J 2001 Vol 42(2):057-060 Aeromonas spp. and the resulting spectrum of infection, intestinal and extra-intestinal, from infants INTRODUCTION and children in an urban area in a hot and humid A variety of human infections, including gastroenteritis, country from Southeast Asia. cellulitis, wound infections, hepatobiliary infections and Materials and methods: Retrospective review of all septicaemia have been reported to be associated with bacterial culture records from children below 16 Aeromonas spp.(1,2). At least three distinctive gastro- years of age, from the Department of Medical intestinal syndromes following gastroenteritis caused by Microbiology, University of Malaya Medical Centre, of Aeromonas sp. have been described: (a) acute, watery Kuala Lumpur, from January 1988 to December 1997. diarrhoea; (b) dysentery; and (c) subacute or chronic Review of all stool samples and rectal swabs obtained diarrhoea(3). Acute watery diarrhoea was self-limiting(4,5). from children during the same period were carried Dysentery-like illness with bloody and mucousy out to ascertain the isolation rate of Aeromonas sp. diarrhoea, mimicking childhood inflammatory bowel from stools and rectal swabs. The case records of disease was seen occasionally(3). The highest attack rate those with a positive Aeromonas culture were for Aeromonas-associated gastroenteritis appears to be retrieved and reviewed. in young children(4). A wide difference in the frequency of isolation of Aeromonas spp. -
Experimental Infection of Aeromonas Hydrophila in Pangasius J Sarker1, MAR Faruk*
Progressive Agriculture 27 (3): 392-399, 2016 ISSN: 1017 - 8139 Experimental infection of Aeromonas hydrophila in pangasius J Sarker1, MAR Faruk* Department of Aquaculture, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh, 1Department of Aquaculture, Chittagong Veterinary and Animal Sciences University, Khulshi, Chittagong, Bangladesh Abstract Experimental infections of Aeromonas hydrophila in juvenile pangasius (Pangasianodon hypophthalmus) were studied. Five different challenge routes included intraperitoneal (IP) injection, intramuscular (IM) injection, oral administration, bath and agar implantation were used with different preparations of the bacteria to infect fish. The challenge experiments were continued for 15 days. A challenge dose of 4.6×106 colony forming unit (cfu) fish-1 was used for IP and IM injection and oral administration method. Generally, IP route was found more effective for infecting and reproducing clinical signs in fish that caused 100% mortality at the end of challenge. IM injection, oral and bath administration routes were also found effective for infecting and reproducing the clinical signs in fish to some extent. Agar implantation with fresh colonies of bacteria also caused 100% mortality of challenged fish very quickly with no visible clinical signs in fish. The major clinical signs of challenged fish included reddening around eyes and mouth, bilateral exophthalmia, hemorrhage and ulceration at fin bases and fin erosion. Key words: Experimental infection, Aeromonas hydrophila, pangasius Progressive Agriculturists. All rights reserve *Corresponding Author: [email protected] Introduction Bacterial diseases are the most common infectious fishes in different locations of Bangladesh (Rahman problem of commercial fish farms causing much and Chowdhury, 1996; Sarker et al., 2000; Alam, mortality. Among the bacterial genera, Aeromonas spp. -
Aeromonas Veronii Biovar Sobria Gastoenteritis: a Case Report
iMedPub Journals 2011 ARCHIVES OF CLINICAL MICROBIOLOGY Vol. 2 No. 5:3 This article is available from: http://www.acmicrob.com doi: 10:3823/240 Aeromonas veronii biovar sobria gastoenteritis: a case report Afreenish Hassan*, Javaid Usman, Fatima Kaleem, National University of Sciences and Technology, Islamabad, Pakistan Maria Omair, Ali Khalid, Muhammad Iqbal * Corresponding author: Dr Afreenish Hassan Abstract E-mail: [email protected] Aeromonas veronii biovar sobria is associated with various infections in humans. Isola- tion of Aeromonas sobria in patients with gastroenteritis is not unusual. We describe a case of Aeromonas veronii biovar sobria gastroenteritis in a young patient. This is the first documented case reported from Pakistan. Introduction were collected for laboratory investigation. He was shifted to the medical ward and was started on Inj. Ciprofloxacin 200mg The genus Aeromonas include many species but the most twice daily, infusion Metronidazole 500mg three times a day, common ones associated with human infections are Aeromo- injection Maxolon 10 mg three times a day. He was rehydrated nas veronii, Aeromons hydrophila, Aeromonas jandaei, Aeromo- with infusion Normal saline 1000ml once daily. He was advised nas caviae and Aeromonas schubertii [1]. The diseases caused to take orally Oral Rehydration salt (ORS). His blood complete by Aeromonas include gastroenteritis, ear and wound infec- picture and urine routine examination was unremarkable ex- tions, cellulitis, urinary tract infections and septicemia [2]. We cept mildly raised neutrophil count in blood (73%) (Table 1,2,3). describe here a case of Aeromonas veronii biovar sobria gastro- On gross examination, his stool sample was of green in colour, enteritis in a young patient. -
An Update on the Genus Aeromonas: Taxonomy, Epidemiology, and Pathogenicity
microorganisms Review An Update on the Genus Aeromonas: Taxonomy, Epidemiology, and Pathogenicity Ana Fernández-Bravo and Maria José Figueras * Unit of Microbiology, Department of Basic Health Sciences, Faculty of Medicine and Health Sciences, IISPV, University Rovira i Virgili, 43201 Reus, Spain; [email protected] * Correspondence: mariajose.fi[email protected]; Tel.: +34-97-775-9321; Fax: +34-97-775-9322 Received: 31 October 2019; Accepted: 14 January 2020; Published: 17 January 2020 Abstract: The genus Aeromonas belongs to the Aeromonadaceae family and comprises a group of Gram-negative bacteria widely distributed in aquatic environments, with some species able to cause disease in humans, fish, and other aquatic animals. However, bacteria of this genus are isolated from many other habitats, environments, and food products. The taxonomy of this genus is complex when phenotypic identification methods are used because such methods might not correctly identify all the species. On the other hand, molecular methods have proven very reliable, such as using the sequences of concatenated housekeeping genes like gyrB and rpoD or comparing the genomes with the type strains using a genomic index, such as the average nucleotide identity (ANI) or in silico DNA–DNA hybridization (isDDH). So far, 36 species have been described in the genus Aeromonas of which at least 19 are considered emerging pathogens to humans, causing a broad spectrum of infections. Having said that, when classifying 1852 strains that have been reported in various recent clinical cases, 95.4% were identified as only four species: Aeromonas caviae (37.26%), Aeromonas dhakensis (23.49%), Aeromonas veronii (21.54%), and Aeromonas hydrophila (13.07%). -
| Oa Tai Ei Rama Telut Literatur
|OA TAI EI US009750245B2RAMA TELUT LITERATUR (12 ) United States Patent ( 10 ) Patent No. : US 9 ,750 ,245 B2 Lemire et al. ( 45 ) Date of Patent : Sep . 5 , 2017 ( 54 ) TOPICAL USE OF AN ANTIMICROBIAL 2003 /0225003 A1 * 12 / 2003 Ninkov . .. .. 514 / 23 FORMULATION 2009 /0258098 A 10 /2009 Rolling et al. 2009 /0269394 Al 10 /2009 Baker, Jr . et al . 2010 / 0034907 A1 * 2 / 2010 Daigle et al. 424 / 736 (71 ) Applicant : Laboratoire M2, Sherbrooke (CA ) 2010 /0137451 A1 * 6 / 2010 DeMarco et al. .. .. .. 514 / 705 2010 /0272818 Al 10 /2010 Franklin et al . (72 ) Inventors : Gaetan Lemire , Sherbrooke (CA ) ; 2011 / 0206790 AL 8 / 2011 Weiss Ulysse Desranleau Dandurand , 2011 /0223114 AL 9 / 2011 Chakrabortty et al . Sherbrooke (CA ) ; Sylvain Quessy , 2013 /0034618 A1 * 2 / 2013 Swenholt . .. .. 424 /665 Ste - Anne -de - Sorel (CA ) ; Ann Letellier , Massueville (CA ) FOREIGN PATENT DOCUMENTS ( 73 ) Assignee : LABORATOIRE M2, Sherbrooke, AU 2009235913 10 /2009 CA 2567333 12 / 2005 Quebec (CA ) EP 1178736 * 2 / 2004 A23K 1 / 16 WO WO0069277 11 /2000 ( * ) Notice : Subject to any disclaimer, the term of this WO WO 2009132343 10 / 2009 patent is extended or adjusted under 35 WO WO 2010010320 1 / 2010 U . S . C . 154 ( b ) by 37 days . (21 ) Appl. No. : 13 /790 ,911 OTHER PUBLICATIONS Definition of “ Subject ,” Oxford Dictionary - American English , (22 ) Filed : Mar. 8 , 2013 Accessed Dec . 6 , 2013 , pp . 1 - 2 . * Inouye et al , “ Combined Effect of Heat , Essential Oils and Salt on (65 ) Prior Publication Data the Fungicidal Activity against Trichophyton mentagrophytes in US 2014 /0256826 A1 Sep . 11, 2014 Foot Bath ,” Jpn . -
Comparative Pathogenomics of Aeromonas Veronii from Pigs in South Africa: Dominance of the Novel ST657 Clone
microorganisms Article Comparative Pathogenomics of Aeromonas veronii from Pigs in South Africa: Dominance of the Novel ST657 Clone Yogandree Ramsamy 1,2,3,* , Koleka P. Mlisana 2, Daniel G. Amoako 3 , Akebe Luther King Abia 3 , Mushal Allam 4 , Arshad Ismail 4 , Ravesh Singh 1,2 and Sabiha Y. Essack 3 1 Medical Microbiology, College of Health Sciences, University of KwaZulu-Natal, Durban 4000, South Africa; [email protected] 2 National Health Laboratory Service, Durban 4001, South Africa; [email protected] 3 Antimicrobial Research Unit, College of Health Sciences, University of KwaZulu-Natal, Durban 4000, South Africa; [email protected] (D.G.A.); [email protected] (A.L.K.A.); [email protected] (S.Y.E.) 4 Sequencing Core Facility, National Institute for Communicable Diseases, National Health Laboratory Service, Johannesburg 2131, South Africa; [email protected] (M.A.); [email protected] (A.I.) * Correspondence: [email protected] Received: 9 November 2020; Accepted: 15 December 2020; Published: 16 December 2020 Abstract: The pathogenomics of carbapenem-resistant Aeromonas veronii (A. veronii) isolates recovered from pigs in KwaZulu-Natal, South Africa, was explored by whole genome sequencing on the Illumina MiSeq platform. Genomic functional annotation revealed a vast array of similar central networks (metabolic, cellular, and biochemical). The pan-genome analysis showed that the isolates formed a total of 4349 orthologous gene clusters, 4296 of which were shared; no unique clusters were observed. All the isolates had similar resistance phenotypes, which corroborated their chromosomally mediated resistome (blaCPHA3 and blaOXA-12) and belonged to a novel sequence type, ST657 (a satellite clone). -
Investigation of Swabs from Skin and Superficial Soft Tissue Infections
UK Standards for Microbiology Investigations Investigation of swabs from skin and superficial soft tissue infections Issued by the Standards Unit, Microbiology Services, PHE Bacteriology | B 11 | Issue no: 6.5 | Issue date: 19.12.18 | Page: 1 of 37 © Crown copyright 2018 Investigation of swabs from skin and superficial soft tissue infections Acknowledgments UK Standards for Microbiology Investigations (SMIs) are developed under the auspices of Public Health England (PHE) working in partnership with the National Health Service (NHS), Public Health Wales and with the professional organisations whose logos are displayed below and listed on the website https://www.gov.uk/uk- standards-for-microbiology-investigations-smi-quality-and-consistency-in-clinical- laboratories. SMIs are developed, reviewed and revised by various working groups which are overseen by a steering committee (see https://www.gov.uk/government/groups/standards-for-microbiology-investigations- steering-committee). The contributions of many individuals in clinical, specialist and reference laboratories who have provided information and comments during the development of this document are acknowledged. We are grateful to the medical editors for editing the medical content. For further information please contact us at: Standards Unit Microbiology Services Public Health England 61 Colindale Avenue London NW9 5EQ E-mail: [email protected] Website: https://www.gov.uk/uk-standards-for-microbiology-investigations-smi-quality- and-consistency-in-clinical-laboratories PHE publications gateway number: 2016056 UK Standards for Microbiology Investigations are produced in association with: Logos correct at time of publishing. Bacteriology | B 11 | Issue no: 6.5 | Issue date: 19.12.18 | Page: 2 of 37 UK Standards for Microbiology Investigations | Issued by the Standards Unit, Public Health England Investigation of swabs from skin and superficial soft tissue infections Contents Acknowledgments ................................................................................................................ -
Contagious Antibiotic Resistance: Plasmid Transfer Among Bacterial Residents Of
bioRxiv preprint doi: https://doi.org/10.1101/2020.11.09.375964; this version posted November 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Contagious Antibiotic Resistance: Plasmid Transfer Among Bacterial Residents of 2 the Zebrafish Gut. 3 4 Wesley Loftie-Eaton1,2, Angela Crabtree1, David Perry1, Jack Millstein1,2, Barrie 5 Robinson1,2, Larry Forney1,2 and Eva Top1,2 # 6 7 1Department of Biological Sciences, 2Institute for Bioinformatics and Evolutionary Studies 8 (IBEST), University of Idaho, PO Box 443051, Moscow, Idaho, USA. Phone: +1-208-885- 9 8858; E-mail: [email protected]; Fax: 208-885-7905 10 # Corresponding author: Department of Biological Sciences, Institute for Bioinformatics 11 and Evolutionary Studies (IBEST), University of Idaho, PO Box 443051, Moscow, Idaho, 12 USA. Phone: +1-208-885-5015; Email: [email protected]; Fax: 208-885-7905 13 14 15 Running title: Plasmid transfer in the zebrafish gut microbiome 16 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.11.09.375964; this version posted November 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 17 Abstract 18 By characterizing the trajectories of antibiotic resistance gene transfer in bacterial 19 communities such as the gut microbiome, we will better understand the factors that 20 influence this spread of resistance. -
Victorian Infectious Diseases Bulletin Volume 10 Issue 2 June 2007 29
Victorian Infectious Diseases Bulletin Volume 10 Issue 2 June 2007 29 Victorian Infectious Diseases Bulletin ISSN 1 441 0575 Volume 10 Issue 2 June 2007 Contents Aeromonas bloodstream infections in Victoria, 1990 to 2006 30 An outbreak of Salmonella Saintpaul linked to rockmelons 33 Victorian Primary Care Network for Sentinel Surveillance on BBVs and STIs: an update 37 Immunisation update 39 Surveillance report 41 30 Victorian Infectious Diseases Bulletin Volume 10 Issue 2 June 2007 Aeromonas bloodstream infections in Victoria: reports to the Victorian Hospital Pathogen Surveillance Scheme, 1990 to 2006 Marion Easton and Mark Veitch, Microbiological Diagnostic Unit – Public Health Laboratory, The University of Melbourne Introduction Methods Aeromonas can be difficult and may Aeromonads are gram negative bacilli The VHPSS provides voluntary, change as new techniques are applied. that inhabit water, soil and many food laboratory-based surveillance of bacterial Demographic, hospitalisation 1–4 types. Most of the Aeromonas species and fungal agents of blood stream and clinical data have been detected in faecal specimens, infections and meningitis in Victoria. The Ninety-nine per cent of the cases although only a few have been established scheme encompasses infections included demographic data, 77 per cent as aetiological agents of human infections, acquired in both community and included hospital admission dates and 92 typically gastroenteritis. Species healthcare settings. Data are provided by per cent included postcode of residence. pathogenic to humans include public and private, metropolitan and There were more cases in males (60 per A. hydrophila, A. caviae, A. veronii bv regional laboratories. These data include cent) than females. There were few cases sobria and bv veronii, A.