Effects of Two Sediment Types on the Fluorescence Yield of Two Hawaiian Scleractinian Corals Gregory A
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Supplementary Material
Supplementary Material SM1. Post-Processing of Images for Automated Classification Imagery was collected without artificial light and using a fisheye lens to maximise light capture, therefore each image needed to be processed prior annotation in order to balance colour and to minimise the non-linear distortion introduced by the fisheye lens (Figure S1). Initially, colour balance and lenses distortion correction were manually applied on the raw images using Photoshop (Adobe Systems, California, USA). However, in order to optimize the manual post-processing time of thousands of images, more recent images from the Indian Ocean and Pacific Ocean were post- processed using compressed images (jpeg format) and an automatic batch processing in Photoshop and ImageMagick, the latter an open-source software for image processing (www.imagemagick.org). In view of this, the performance of the automated image annotation on images without colour balance was contrasted against images colour balanced using manual post-processing (on raw images) and the automatic batch processing (on jpeg images). For this evaluation, the error metric described in the main text (Materials and Methods) was applied to the images from following regions: the Maldives and the Great Barrier Reef (Figures S2 and S3). We found that the colour balance applied regardless the type of processing (manual vs automatic) had an important beneficial effect on the performance of the automated image annotation as errors were reduced for critical labels in both regions (e.g., Algae labels; Figures S2 and S3). Importantly, no major differences in the performance of the automated annotations were observed between manual and automated adjustments for colour balance. -
Hawai'i Institute of Marine Biology Northwestern Hawaiian Islands
Hawai‘i Institute of Marine Biology Northwestern Hawaiian Islands Coral Reef Research Partnership Quarterly Progress Reports II-III August, 2005-March, 2006 Report submitted by Malia Rivera and Jo-Ann Leong April 21, 2006 Photo credits: Front cover and back cover-reef at French Frigate Shoals. Upper left, reef at Pearl and Hermes. Photos by James Watt. Hawai‘i Institute of Marine Biology Northwestern Hawaiian Islands Coral Reef Research Partnership Quarterly Progress Reports II-III August, 2005-March, 2006 Report submitted by Malia Rivera and Jo-Ann Leong April 21, 2006 Acknowledgments. Hawaii Institute of Marine Biology (HIMB) acknowledges the support of Senator Daniel K. Inouye’s Office, the National Marine Sanctuary Program (NMSP), the Northwestern Hawaiian Islands Coral Reef Ecosystem Reserve (NWHICRER), State of Hawaii Department of Land and Natural Resources (DLNR) Division of Aquatic Resources, US Fish and Wildlife Service, NOAA Fisheries, and the numerous University of Hawaii partners involved in this project. Funding provided by NMSP MOA 2005-008/66832. Photos provided by NOAA NWHICRER and HIMB. Aerial photo of Moku o Lo‘e (Coconut Island) by Brent Daniel. Background The Hawai‘i Institute of Marine Biology (School of Ocean and Earth Science and Technology, University of Hawai‘i at Mānoa) signed a memorandum of agreement with National Marine Sanctuary Program (NOS, NOAA) on March 28, 2005, to assist the Northwestern Hawaiian Islands Coral Reef Ecosystem Reserve (NWHICRER) with scientific research required for the development of a science-based ecosystem management plan. With this overriding objective, a scope of work was developed to: 1. Understand the population structures of bottomfish, lobsters, reef fish, endemic coral species, and adult predator species in the NWHI. -
Genetic Structure Is Stronger Across Human-Impacted Habitats Than Among Islands in the Coral Porites Lobata
Genetic structure is stronger across human-impacted habitats than among islands in the coral Porites lobata Kaho H. Tisthammer1,2, Zac H. Forsman3, Robert J. Toonen3 and Robert H. Richmond1 1 Kewalo Marine Laboratory, University of Hawaii at Manoa, Honolulu, HI, United States of America 2 Department of Biology, San Francisco State University, San Francisco, CA, United States of America 3 Hawaii Institute of Marine Biology, University of Hawaii at Manoa, Kaneohe, HI, United States of America ABSTRACT We examined genetic structure in the lobe coral Porites lobata among pairs of highly variable and high-stress nearshore sites and adjacent less variable and less impacted offshore sites on the islands of O‘ahu and Maui, Hawai‘i. Using an analysis of molecular variance framework, we tested whether populations were more structured by geographic distance or environmental extremes. The genetic patterns we observed followed isolation by environment, where nearshore and adjacent offshore populations showed significant genetic structure at both locations (AMOVA FST D 0.04∼0.19, P < 0:001), but no significant isolation by distance between islands. Strikingly, corals from the two nearshore sites with higher levels of environmental stressors on different islands over 100 km apart with similar environmentally stressful conditions were genetically closer (FST D 0.0, P D 0.73) than those within a single location less than 2 km apart (FST D 0.04∼0.08, P < 0:01). In contrast, a third site with a less impacted nearshore site (i.e., less pronounced environmental gradient) showed no significant structure from the offshore comparison. Our results show much stronger support for environment than distance separating these populations. -
Bleaching and Recovery of Five Eastern Pacific Corals in an El Niño-Related Temperature Experiment
BULLETIN OF MARINE SCIENCE, 69(1): 215–236, 2001 BLEACHING AND RECOVERY OF FIVE EASTERN PACIFIC CORALS IN AN EL NIÑO-RELATED TEMPERATURE EXPERIMENT Christiane Hueerkamp, Peter W. Glynn, Luis D’Croz, Juan L. Maté and Susan B. Colley ABSTRACT Coral bleaching events have increased in frequency and severity, due mainly to el- evated water temperature associated with El Niño-related warming and a general global warming trend. We experimentally tested the effects of El Niño-like sea temperature conditions on five reef-building corals in the Gulf of Panama. Branching species (Pocillopora damicornis and Pocillopora elegans) and massive species (Porites lobata, Pavona clavus and Pavona gigantea) were exposed to experimentally elevated seawater temperature, ~1–2∞C above ambient. Differences in zooxanthellate coral responses to bleaching and ability to recover were compared and quantified. All corals exposed to high temperature treatment exhibited significant declines in zooxanthellae densities and chlorophyll a concentrations. Pocilloporid species were the most sensitive, being the first to bleach, and suffered the highest mortality (50% after 50 d exposure). Massive coral species demonstrated varying tolerances, but were generally less affected. P. gigantea exhibited the greatest resistance to bleaching, with no lethal effects observed. Maximum experimental recovery was observed in P. lobata. No signs of recovery occurred in P. clavus, as zooxanthellae densities and chlorophyll a concentrations continued to decline under ambient (control) conditions. Experimental coral responses from populations in an upwelling environment are contrasted with field responses observed in a nonupwelling area during the 1997–98 El Niño–Southern Oscillation event. A variety of stressors can lead to coral bleaching, the whitening of coral tissue, a prob- lem that threatens reefs worldwide. -
Biological Environmental Survey in Cat Ba Island
Biodiversity International Journal Research Article Open Access Biological environmental survey in Cat Ba Island Abstract Volume 2 Issue 2 - 2018 Cat Ba Island has a significant biodiversity value as it is home to a number of rare and endangered species of plants and animals, with the world’s rarest primates the Golden- Doan Quang Tri,1,2 Tran Hong Thai2 headed Langur. According to the study results, Cat Ba place have listed 2,380 species of 1Ton Duc Thang University, Vietnam animals and plants including: terrestrial plants 741 species; living animals in the forest area 2 Vietnam Meteorological and Hydrological Administration, 282 species; mangrove plants 30 species; seaweeds 79 species; phytoplankton 287 species; Vietnam plank tonic animals 98 species; sea-fish 196 species; corals 154 species. It is identified as one of the areas of highest biodiversity importance in Vietnam and is recognized as a high Correspondence: Doan Quang Tri, Sustainable Management of priority for global conservation. Natural Resources and Environment Research Group, Faculty of Environment and Labour Safety, Ton Duc Thang University, Ho Keywords: mangrove, seagrass, coral reef, phytoplankton, cat ba island Chi Minh City, Vietnam, Email [email protected] Received: December 04, 2017 | Published: March 28, 2018 Introduction the richest marine biological system because of its diversity in the North of Vietnam.3‒7 Biosphere reserves Cat Ba Island has been recognized as a UNESCO World on December 02nd, 2004. It is the 4th world’s biosphere reserve in Vietnam. Biosphere reserves Cat Ba archipelago including great majority of Cat Ba Island in Cat Hai district, Hai Phong city, Vietnam. -
Dominance of a Coral Community by the Genus Porites (Scleractinia)
MARINE ECOLOGY PROGRESS SERIES Vol. 23: 79-84. 1985 - Published April 25 Mar. Ecol. hog. Ser. Dominance of a coral community by the genus Porites (Scleractinia) Biology Department and Center for Marine Studies, University of California, Santa Cruz, California 95064, USA Australian Institute of Marine Science, P. M. B. No. 3, Townsville, M. C., Queensland 4810, Australia ABSTRACT: The genus Porites is a major component of many coral communities on inshore continental shelf reefs of the Great Barrier Reef. On the leeward margin of Pandora Reef, 7 species of massive Porites physically dominate the coral community. The populations of commoner species are themselves dominated, demographically and genetically by a few persistent genotypes. Five % of colonies contain 52 % of skeletal CaC03; 9 % of colonies have 50 % of living tissues. The largest colony is at least 677 yr old. Genotypic ages of tissues may be considerably greater, since colonies appear to form clones by fragmentation. INTRODUCTION level fluctuations. It is proposed that small numbers of large, old genotypes could dominate populations to Descriptions of coral reefs often mention very large such an extent that those populations would not colonies, sometimes with speculation about their ages experience sufficient numbers of generations for com- (e.g. Wells 1957, Goreau et al. 1972), but the ecologi- pletion of directional evolutionary processes during cal, evolutionary and structural implications of large the persistence of particular habitats at a given sea size and extreme longevity are rarely discussed (but level. see Highsmith 1982). Some coral communities of the The major objective of this study was examination of Great Barrier Reef contain numerous large and pre- the structure of the Porites community on Pandora Reef sumably old colonies of Porites. -
(Scleractinia: Poritidae) in Isla Del Coco National Park, Costa Rica Jennifer N
High genotypic diversity of the reef-building coral Porites lobata (Scleractinia: Poritidae) in Isla del Coco National Park, Costa Rica Jennifer N. Boulay1, Jorge Cortés2, Jaime Nivia-Ruiz2 & Iliana B. Baums1 1. Department of Biology, The Pennsylvania State University, 208 Mueller Laboratory, University Park, Pennsylvania 16802, USA; [email protected] 2. Centro de Investigación en Ciencias del Mar y Limnología (CIMAR), Universidad de Costa Rica, San Pedro, 11501- 2060 San José, Costa Rica; [email protected] Received 02-III-2012. Corrected 25-IX-2012. Accepted 29-IX-2012. Abstract: The isolated Isla del Coco experiences periodic, extreme disturbances which devastate coral reefs surrounding the island. Scleractinian corals build the physical structure of the reef therefore ecosystem recovery relies on coral species recovery. Coral recruits can be of sexual or asexual origin, and the relative success of the two recruit types influences the speed and spread of recovery processes. Here we focus on the massive coral, Porites lobata, because it is the main reef-builder around Isla del Coco to describe the relative contribution of asexual and sexual recruits to population maintenance. P. lobata samples were collected using a spatially explicit random sampling design in three plots at Isla del Coco: Punta Ulloa (n=17), Bahía Weston (n=20) and Punta María (n=20) and samples were genotyped with 11 microsatellite markers. Additional sampling was conducted at three “coastal” sites near the Costa Rican mainland (Isla del Caño Biological Reserve): Caño1 (n=8), Caño2 (n=10), Caño5 (n=11) to compare the contributions of asexual and sexual recruits at Isla del Coco sites to coastal sites. -
DISEASES of HAWAIIAN CORALS If You See a Lesion, First Scan the Area to Detect Possible Obvious Causes (Predation/Competition)
Seven steps to describing lesions in corals DISEASES OF HAWAIIAN CORALS If you see a lesion, first scan the area to detect possible obvious causes (predation/competition). If the lesion cannot be explained, record the following: 1. Name of coral, location and date. 2. Lesion: Tissue loss, Growth anomaly, Discoloration. 3. Lesion color (color chart bottom). 4. Distribution of lesion on colony. A B C 5. If present, color of border surrounding lesion (color chart bottom). 6. Estimated percent of colony affected. A) 25% B) 50% C) 75%+ 7. If tissue loss, pattern of algal colonization of skeleton (purple-coral tissue; white-bare skeleton; green-algae). B) Tissue- A) Tissue- C) Tissue- Skeleton- Skeleton Algae Algae Diseases can kill corals and can be a A B C D E F G H I J manifestation of stressed reefs. Montipora Banded Tissue loss Montipora Growth Anomaly Hosts: M. patula Hosts: M. capitata, M. patula Distribution: Oahu, Kauai Distribution: Main and northwestern Hawaiian islands (NWHI) Abundance: Rare Abundance: Occasional DISEASES OF HAWAIIAN CORALS EXAMPLE OF LESION DESCRIPTION Corals, like all animals, are susceptible to diseases. Diseases can be caused by infectious (biotic) agents such as viruses, bacteria, fungi or parasites or by non- infectious (abiotic) agents such as temperature changes or poisons. In some regions, diseases have led to severe declines of coral reefs. Disease in a coral can be manifested as tissue loss, discoloration or growth anomalies. However, other processes such as tissue loss due to predation or discoloration from competition with algae or other organisms can also cause these lesions. -
Lesion Healing on Massive Porites Spp. Corals
MARINE ECOLOGY PROGRESS SERIES Vol. 164: 213-220, 1998 Published April 9 Mar Ecol Prog Ser - Lesion healing on massive Porites spp. corals R. van Woesik* Department of Marine Sciences, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan ABSTRACT: Sn~alltissue lesions 15 to 1310 mm2 were inflicted on massive Porites spp. corals living in a shallow moat (<3m) in Okinawa, Japan. All but 1 lesion, affected by extreme mid-winter low tides, healed completely within 19 mo. Regenerat~onrates decreased exponentially over time and decreased in accordance with the lesion's surface area. The best predictive models were those using the deriva- tives of the exponential equations. A high perimeter to surface area ratio was a consequence of, and appeared to facilitate, regeneration. There was no significant difference in the rate of lesion regenera- tion between Porites lutea and Porites lobata. KEY WORDS: Lesions . Massive Porjtes . Healing rates INTRODUCTION mortality during episodes of Acanthaster planci preda- tion (author's pers, obs.). Massive Porites corals are prolific throughout the Studies on the regeneration of coral lesions extend world's tropical oceans (Veron 1995);they are particu- back several decades (Stephenson & Stephenson 1933, larly common on reefs nearshore and are arguably the Kawaguti 1936, Fishelson 1973, Loya 1976). The most important reef-building corals on the inner Great capacity to regenerate appears to be species specific Barrier Reef (Australia) (Hopley 1982, Davies 1983). and dependent on lesion size, sea-surface tempera- Porites colonies have long been recognised for their ture, water depth and whether the colony has been usefulness as temporal analogues (Buddemeier & recently bleached (Lester & Bak 1985, Meesters & Bak Kinzie 1976) and have become the focus of palaeo- 1993, Meesters et al. -
High Heritability of Coral Calcification Rates and Evolutionary Potential
www.nature.com/scientificreports OPEN High heritability of coral calcifcation rates and evolutionary potential under ocean acidifcation Christopher P. Jury1*, Mia N. Delano2 & Robert J. Toonen1* Estimates of heritability inform evolutionary potential and the likely outcome of many management actions, but such estimates remain scarce for marine organisms. Here, we report high heritability of calcifcation rate among the eight most dominant Hawaiian coral species under reduced pH simulating future ocean conditions. Coral colonies were sampled from up to six locations across a natural mosaic in seawater chemistry throughout Hawaiʻi and fragmented into clonal replicates maintained under both ambient and high pCO2 conditions. Broad sense heritability of calcifcation rates was high among all eight species, ranging from a low of 0.32 in Porites evermanni to a high of 0.61 in Porites compressa. The overall results were inconsistent with short-term acclimatization to the local environment or adaptation to the mean or ideal conditions. Similarly, in ‘local vs. foreign’ and ‘home vs. away’ tests there was no clear signature of local adaptation. Instead, the data are most consistent with a protected polymorphism as the mechanism which maintains diferential pH tolerance within the populations. Substantial individual variation, coupled with high heritability and large population sizes, imply considerable scope for natural selection and adaptive capacity, which has major implications for evolutionary potential and management of corals in response to climate change. Coral reefs are home to roughly one-quarter of marine biodiversity, provide food for hundreds of millions of people, and billions of dollars annually worth of ecosystem services, but reefs are increasingly threatened by global change and local human impacts1,2. -
Sea Level and Its Effects on Reefs in Hawaiÿi
CHAPTER 5 Reef Fringing i ÿ Reef Corals and the Coral Reefs of South Molokaÿi Paul L. Jokiel1, Eric K. Brown2, Kuÿulei S. Rodgers1, and William R. Smith1 ich and diverse marine benthic habitats exist along much of the conditions and changes over time. Corals are the keystone species that of reef-forming corals on the reefs of south Molokaÿi. They are the “rice south Molokaÿi coral reef, as demonstrated by maps of the area form the reef framework through secretion of limestone skeletons. The corals” Montipora capitata (previously known as Montipora verrucosa), R(see Cochran, this vol., chap. 9 for a complete discussion of benthic abundance and diversity of reef fish are directly related to coral commu- and Montipora patula; the “finger coral” Porites compressa; the massive Character of the South Moloka habitats). Habitats that support corals generally contain a characteristic nity development (see Friedlander and Rodgers, this vol., chap. 7 for a “lobe coral” Porites lobata; and the “cauliflower coral” Pocillopora mean- assemblage of coral species that can be referred to as a “coral community.” complete discussion of reef fish on Molokaÿi). The ecological importance, drina. South Molokaÿi reefs are also inhabited by a number of other species Composition of each coral community is controlled by numerous environ- economic value, and environmental sensitivity of corals make them ideal of reef-forming and soft corals that range in abundance from rare to com- mental factors that influence recruitment, growth, and mortality of each subjects for monitoring and assessment efforts. Brown and others (this vol., mon. These species increase biodiversity, have great aesthetic value, and are component species. -
Growth Rates of Eight Species of Scleractinian Corals in the Eastern Pacific (Costa Rica)
BULLETIN OF MARINE SCIENCE, 44(3): 1186-1194, 1989 CORAL REEF PAPER GROWTH RATES OF EIGHT SPECIES OF SCLERACTINIAN CORALS IN THE EASTERN PACIFIC (COSTA RICA) Hector M. Guzman and Jorge Cortes ABSTRACT The annual linear skeletal growth rates for the following hermatypic corals was studied at thc non-upwelling area of Caiio Island, Costa Rica: Porites lobata Dana; Pavona varians Verrill; Pavona clavus Dana; Pavona gigantea Verrill; Gardineroseris planulata (Dana); Psam- mocora superficialis (Gardiner); Pocillopora elegans Dana; Pocillopora damicornis (Linnaeus). The seasonal growth rates of the main reef-building corals, P. lobata and P. damicornis, were measured and correlated with five environmental variables. Growth rates for P. varians and P. superficialis are presented for the first time. The species with growth rates similar to corals from non-upwelling areas, Porites lobata, Pocillopora damicornis, P. elegans, are the dominant species at Caiio Island, while the other species studied, Pavona clavus, P. gigantea and Gardineroseris planulata, have reduced growth rates compared to other areas. The results suggest that seasonal growth, which is greater during the dry season, may be affected by variations in available light, cloud cover, turbidity, salinity and reproductive time rather than temperature changes. Coral reefs grow under a variety of oceanographic and climatic conditions (e.g., upwelling and non-upwelling areas) along the Tropical Eastern Pacific coast, from Ecuador to Costa Rica. Thus, the community structure (coral zonation, abun- dance, and dominance) of these reefs differs markedly among localities, and the growth rates and morphology of colonial corals vary greatly in response to different environmental factors (Dodge and Vaisnys, 1975; Chappell, 1980; Hudson, 1981).