Lesion Healing on Massive Porites Spp. Corals
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Supplementary Material
Supplementary Material SM1. Post-Processing of Images for Automated Classification Imagery was collected without artificial light and using a fisheye lens to maximise light capture, therefore each image needed to be processed prior annotation in order to balance colour and to minimise the non-linear distortion introduced by the fisheye lens (Figure S1). Initially, colour balance and lenses distortion correction were manually applied on the raw images using Photoshop (Adobe Systems, California, USA). However, in order to optimize the manual post-processing time of thousands of images, more recent images from the Indian Ocean and Pacific Ocean were post- processed using compressed images (jpeg format) and an automatic batch processing in Photoshop and ImageMagick, the latter an open-source software for image processing (www.imagemagick.org). In view of this, the performance of the automated image annotation on images without colour balance was contrasted against images colour balanced using manual post-processing (on raw images) and the automatic batch processing (on jpeg images). For this evaluation, the error metric described in the main text (Materials and Methods) was applied to the images from following regions: the Maldives and the Great Barrier Reef (Figures S2 and S3). We found that the colour balance applied regardless the type of processing (manual vs automatic) had an important beneficial effect on the performance of the automated image annotation as errors were reduced for critical labels in both regions (e.g., Algae labels; Figures S2 and S3). Importantly, no major differences in the performance of the automated annotations were observed between manual and automated adjustments for colour balance. -
Hawai'i Institute of Marine Biology Northwestern Hawaiian Islands
Hawai‘i Institute of Marine Biology Northwestern Hawaiian Islands Coral Reef Research Partnership Quarterly Progress Reports II-III August, 2005-March, 2006 Report submitted by Malia Rivera and Jo-Ann Leong April 21, 2006 Photo credits: Front cover and back cover-reef at French Frigate Shoals. Upper left, reef at Pearl and Hermes. Photos by James Watt. Hawai‘i Institute of Marine Biology Northwestern Hawaiian Islands Coral Reef Research Partnership Quarterly Progress Reports II-III August, 2005-March, 2006 Report submitted by Malia Rivera and Jo-Ann Leong April 21, 2006 Acknowledgments. Hawaii Institute of Marine Biology (HIMB) acknowledges the support of Senator Daniel K. Inouye’s Office, the National Marine Sanctuary Program (NMSP), the Northwestern Hawaiian Islands Coral Reef Ecosystem Reserve (NWHICRER), State of Hawaii Department of Land and Natural Resources (DLNR) Division of Aquatic Resources, US Fish and Wildlife Service, NOAA Fisheries, and the numerous University of Hawaii partners involved in this project. Funding provided by NMSP MOA 2005-008/66832. Photos provided by NOAA NWHICRER and HIMB. Aerial photo of Moku o Lo‘e (Coconut Island) by Brent Daniel. Background The Hawai‘i Institute of Marine Biology (School of Ocean and Earth Science and Technology, University of Hawai‘i at Mānoa) signed a memorandum of agreement with National Marine Sanctuary Program (NOS, NOAA) on March 28, 2005, to assist the Northwestern Hawaiian Islands Coral Reef Ecosystem Reserve (NWHICRER) with scientific research required for the development of a science-based ecosystem management plan. With this overriding objective, a scope of work was developed to: 1. Understand the population structures of bottomfish, lobsters, reef fish, endemic coral species, and adult predator species in the NWHI. -
Genetic Structure Is Stronger Across Human-Impacted Habitats Than Among Islands in the Coral Porites Lobata
Genetic structure is stronger across human-impacted habitats than among islands in the coral Porites lobata Kaho H. Tisthammer1,2, Zac H. Forsman3, Robert J. Toonen3 and Robert H. Richmond1 1 Kewalo Marine Laboratory, University of Hawaii at Manoa, Honolulu, HI, United States of America 2 Department of Biology, San Francisco State University, San Francisco, CA, United States of America 3 Hawaii Institute of Marine Biology, University of Hawaii at Manoa, Kaneohe, HI, United States of America ABSTRACT We examined genetic structure in the lobe coral Porites lobata among pairs of highly variable and high-stress nearshore sites and adjacent less variable and less impacted offshore sites on the islands of O‘ahu and Maui, Hawai‘i. Using an analysis of molecular variance framework, we tested whether populations were more structured by geographic distance or environmental extremes. The genetic patterns we observed followed isolation by environment, where nearshore and adjacent offshore populations showed significant genetic structure at both locations (AMOVA FST D 0.04∼0.19, P < 0:001), but no significant isolation by distance between islands. Strikingly, corals from the two nearshore sites with higher levels of environmental stressors on different islands over 100 km apart with similar environmentally stressful conditions were genetically closer (FST D 0.0, P D 0.73) than those within a single location less than 2 km apart (FST D 0.04∼0.08, P < 0:01). In contrast, a third site with a less impacted nearshore site (i.e., less pronounced environmental gradient) showed no significant structure from the offshore comparison. Our results show much stronger support for environment than distance separating these populations. -
Bleaching and Recovery of Five Eastern Pacific Corals in an El Niño-Related Temperature Experiment
BULLETIN OF MARINE SCIENCE, 69(1): 215–236, 2001 BLEACHING AND RECOVERY OF FIVE EASTERN PACIFIC CORALS IN AN EL NIÑO-RELATED TEMPERATURE EXPERIMENT Christiane Hueerkamp, Peter W. Glynn, Luis D’Croz, Juan L. Maté and Susan B. Colley ABSTRACT Coral bleaching events have increased in frequency and severity, due mainly to el- evated water temperature associated with El Niño-related warming and a general global warming trend. We experimentally tested the effects of El Niño-like sea temperature conditions on five reef-building corals in the Gulf of Panama. Branching species (Pocillopora damicornis and Pocillopora elegans) and massive species (Porites lobata, Pavona clavus and Pavona gigantea) were exposed to experimentally elevated seawater temperature, ~1–2∞C above ambient. Differences in zooxanthellate coral responses to bleaching and ability to recover were compared and quantified. All corals exposed to high temperature treatment exhibited significant declines in zooxanthellae densities and chlorophyll a concentrations. Pocilloporid species were the most sensitive, being the first to bleach, and suffered the highest mortality (50% after 50 d exposure). Massive coral species demonstrated varying tolerances, but were generally less affected. P. gigantea exhibited the greatest resistance to bleaching, with no lethal effects observed. Maximum experimental recovery was observed in P. lobata. No signs of recovery occurred in P. clavus, as zooxanthellae densities and chlorophyll a concentrations continued to decline under ambient (control) conditions. Experimental coral responses from populations in an upwelling environment are contrasted with field responses observed in a nonupwelling area during the 1997–98 El Niño–Southern Oscillation event. A variety of stressors can lead to coral bleaching, the whitening of coral tissue, a prob- lem that threatens reefs worldwide. -
Biological Environmental Survey in Cat Ba Island
Biodiversity International Journal Research Article Open Access Biological environmental survey in Cat Ba Island Abstract Volume 2 Issue 2 - 2018 Cat Ba Island has a significant biodiversity value as it is home to a number of rare and endangered species of plants and animals, with the world’s rarest primates the Golden- Doan Quang Tri,1,2 Tran Hong Thai2 headed Langur. According to the study results, Cat Ba place have listed 2,380 species of 1Ton Duc Thang University, Vietnam animals and plants including: terrestrial plants 741 species; living animals in the forest area 2 Vietnam Meteorological and Hydrological Administration, 282 species; mangrove plants 30 species; seaweeds 79 species; phytoplankton 287 species; Vietnam plank tonic animals 98 species; sea-fish 196 species; corals 154 species. It is identified as one of the areas of highest biodiversity importance in Vietnam and is recognized as a high Correspondence: Doan Quang Tri, Sustainable Management of priority for global conservation. Natural Resources and Environment Research Group, Faculty of Environment and Labour Safety, Ton Duc Thang University, Ho Keywords: mangrove, seagrass, coral reef, phytoplankton, cat ba island Chi Minh City, Vietnam, Email [email protected] Received: December 04, 2017 | Published: March 28, 2018 Introduction the richest marine biological system because of its diversity in the North of Vietnam.3‒7 Biosphere reserves Cat Ba Island has been recognized as a UNESCO World on December 02nd, 2004. It is the 4th world’s biosphere reserve in Vietnam. Biosphere reserves Cat Ba archipelago including great majority of Cat Ba Island in Cat Hai district, Hai Phong city, Vietnam. -
Coral Injuries Caused by Spirobranchus Opercula with and Without Epibiotic Turf Algae at Curaçao
Marine Biology (2019) 166:60 https://doi.org/10.1007/s00227-019-3504-6 SHORT NOTE Coral injuries caused by Spirobranchus opercula with and without epibiotic turf algae at Curaçao Bert W. Hoeksema1,2 · Dagmar Wels1 · Roeland J. van der Schoot1 · Harry A. ten Hove1 Received: 11 January 2019 / Accepted: 26 March 2019 © The Author(s) 2019 Abstract Reef-dwelling Christmas tree worms (Spirobranchus spp.) are common coral associates. Their calcareous tubes are usually embedded in the coral skeleton and can be closed by an operculum. Tubes not overgrown by coral tissue either remain bare or become covered by algae. Despite their widespread distribution, high abundance and striking appearance, little is known about the impact of these worms on their hosts. We quantifed visible coral damage caused by Spirobranchus in Curaçao (Southern Caribbean) and found that 62.6% of worm opercula (n = 1323) caused abrasions and tissue loss in their hosts. Filamentous turf algae, known to be potentially harmful to corals, covered 76.9% of the opercula. Examination of the six most frequently inhabited host species showed a variation in the damage percentages, although this was independent of the presence of epibiotic algae on 78.4% of all opercula. Since injured corals are more susceptible to diseases, the overall nega- tive impact of Spirobranchus worms on their hosts may be more severe than previously assumed. Introduction and Nishihira 1996), even if the host becomes overgrown by sponges and octocorals, which in turn can act as replacement Coral-dwelling tubeworms of the genus Spirobranchus hosts (Hoeksema et al. 2015, 2016; García-Hernández and (Polychaeta: Serpulidae), known popularly as Christmas Hoeksema 2017). -
Reproduction and Population of Porites Divaricata at Rodriguez Key: the Lorf Ida Keys, USA John Mcdermond Nova Southeastern University, [email protected]
Nova Southeastern University NSUWorks HCNSO Student Theses and Dissertations HCNSO Student Work 1-1-2014 Reproduction and Population of Porites divaricata at Rodriguez Key: The lorF ida Keys, USA John McDermond Nova Southeastern University, [email protected] Follow this and additional works at: https://nsuworks.nova.edu/occ_stuetd Part of the Marine Biology Commons, and the Oceanography Commons Share Feedback About This Item NSUWorks Citation John McDermond. 2014. Reproduction and Population of Porites divaricata at Rodriguez Key: The Florida Keys, USA. Master's thesis. Nova Southeastern University. Retrieved from NSUWorks, Oceanographic Center. (17) https://nsuworks.nova.edu/occ_stuetd/17. This Thesis is brought to you by the HCNSO Student Work at NSUWorks. It has been accepted for inclusion in HCNSO Student Theses and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. NOVA SOUTHEASTERN UNIVERSITY OCEANOGRAPHIC CENTER Reproduction and Population of Porites divaricata at Rodriguez Key: The Florida Keys, USA By: John McDermond Submitted to the faculty of Nova Southeastern University Oceanographic Center in partial fulfillment of the requirements for the degree of Master of Science with a specialty in Marine Biology Nova Southeastern University i Thesis of John McDermond Submitted in Partial Fulfillment of the Requirements for the Degree of Masters of Science: Marine Biology Nova Southeastern University Oceanographic Center Major Professor: __________________________________ -
What Is Coral Bleaching
Mote Marine Laboratory / Florida Keys National Marine Sanctuary Florida Keys BleachWatch Program CORAL BLEACHING FACT SHEET A single coral colony is made up of numerous individual coral polyps (see photo right). Corals depend on unicellular algae known as zooxanthellae located inside their tissue to provide them with carbohydrates and oxygen through photosynthesis. The zooxanthellae are usually golden brown in color and are found at various densities in individual species of corals. Some corals have additional pigments in their tissues which when combined with the zooxanthellae gives the normal “healthy” coloration of the coral. Stressed corals may lose or expel zooxanthellae. The Photo: MML transparent tissue remains with the underlying white skeleton Healthy Porites astreoides polyp showing giving the coral a bleached white appearance. This process is zooxanthellae. called coral bleaching. What Causes Coral Bleaching? Bleaching is a stress response that results when the coral-algae relationship Healthy Bleached breaks down. Coral bleaching can be caused by a wide range of environmental stressors such as pollution, oil spills, increased sedimentation, extremes in sea temperatures, Photo: MML extremes in salinity, low oxygen, disease, and Comparison of healthy (left) and paling (middle) and bleached (right) brain coral Colpophyllia natans. predation. The corals are still alive after bleaching and do not necessarily always die. If the environmental conditions return to normal rather quickly, the corals can regain or regrow their zooxanthellae and survive. If the stressors are prolonged, the corals are more susceptible to disease, predation, and death because they are without an important energy source. Past, Present …FUTURE? Localized or colony specific bleaching has been recorded for over 100 years but only in the last 20 years have we seen mass bleaching events. -
Rare Parthenogenic Reproduction in a Common Reef Coral, Porites Astreoides Alicia A
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by NSU Works Nova Southeastern University NSUWorks HCNSO Student Theses and Dissertations HCNSO Student Work 1-26-2018 Rare Parthenogenic Reproduction in a Common Reef Coral, Porites astreoides Alicia A. Vollmer [email protected] Follow this and additional works at: https://nsuworks.nova.edu/occ_stuetd Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons Share Feedback About This Item NSUWorks Citation Alicia A. Vollmer. 2018. Rare Parthenogenic Reproduction in a Common Reef Coral, Porites astreoides. Master's thesis. Nova Southeastern University. Retrieved from NSUWorks, . (464) https://nsuworks.nova.edu/occ_stuetd/464. This Thesis is brought to you by the HCNSO Student Work at NSUWorks. It has been accepted for inclusion in HCNSO Student Theses and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Thesis of Alicia A. Vollmer Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science M.S. Marine Biology M.S. Coastal Zone Management Nova Southeastern University Halmos College of Natural Sciences and Oceanography January 2018 Approved: Thesis Committee Major Professor: Nicole Fogarty Committee Member: Joana Figueiredo Committee Member: Xaymara Serrano This thesis is available at NSUWorks: https://nsuworks.nova.edu/occ_stuetd/464 HALMOS COLLEGE OF NATURAL SCIENCES AND OCEANOGRAPHY RARE PARTHENOGENIC REPRODUCTION IN A COMMON REEF CORAL, PORITES ASTREOIDES By Alicia A. Vollmer Submitted to the Faculty of Halmos College of Natural Sciences and Oceanography in partial fulfillment of the requirements for the degree of Master of Science with a specialty in: Marine Biology and Coastal Zone Management Nova Southeastern University January 26, 2018 Thesis of Alicia A. -
Differential Regeneration of Artificial Lesions Among Sympatric Morphs of the Caribbean Corals Porites Astreoides and Stephanocoenia Michelinii
MARINE ECOLOGY PROGRESS SERIES Vol. 163: 279-283.1998 Published March 12 Mar Ecol Prog Ser ' NOTE Differential regeneration of artificial lesions among sympatric morphs of the Caribbean corals Porites astreoides and Stephanocoenia michelinii 'Institute for Systematics and Population Biology, University of Amsterdam, Mauritskade 61, PO Box 94766,1090 GT Amsterdam, The Netherlands 'Carmabi Foundation. PO Box 2090, Piscaderabaai zln. Curaqao, Netherlands Antilles 3Netherlands Institute for Sea Research. PO Box 59, 1790 AB Den Burg.Texe1, The Netherlands ABSTRACT: Regeneration of artificial lesions was studied as tion, external and internal morphology, behavior, ecol- an ecophysiological character in 2 morphs of Porites astre- ogy (e.g. non-scleractinian associates, distribution), oides and Stephanocoenia michelinii to contribute to a better and physiology (environmental tolerance limits), to understanding of their presently unclear taxonomic status. As a reference, regeneration was also studied In 3 species1 distinguish closely related species when skeletal fea- morphs of h4adracis. P. astreoides consists of a green and a tures fail to reveal differences. A multi-character brown morph, while S. michelinii consists of an encrusting approach is even more favored, because when a con- morph with widely spaced corallites and a massive morph sistent pattern is found in several characters, debate with compacted polyps. Regeneration was significantly faster in the green P. astreoides and in the encrusting S. michelinii. over the adequacy of a particular characteristic as a No sigmficant differences were found among the Madracis taxonomic tool becomes less important (Wed&Knowl- species/morphs. The energy required for faster regeneration ton 1994). This approach is now being used more often in the 2 morphs was apparently not generated as a result of than before, and is frequently based on a combination elevated densities of zooxanthellae or chlorophyll a. -
Dominance of a Coral Community by the Genus Porites (Scleractinia)
MARINE ECOLOGY PROGRESS SERIES Vol. 23: 79-84. 1985 - Published April 25 Mar. Ecol. hog. Ser. Dominance of a coral community by the genus Porites (Scleractinia) Biology Department and Center for Marine Studies, University of California, Santa Cruz, California 95064, USA Australian Institute of Marine Science, P. M. B. No. 3, Townsville, M. C., Queensland 4810, Australia ABSTRACT: The genus Porites is a major component of many coral communities on inshore continental shelf reefs of the Great Barrier Reef. On the leeward margin of Pandora Reef, 7 species of massive Porites physically dominate the coral community. The populations of commoner species are themselves dominated, demographically and genetically by a few persistent genotypes. Five % of colonies contain 52 % of skeletal CaC03; 9 % of colonies have 50 % of living tissues. The largest colony is at least 677 yr old. Genotypic ages of tissues may be considerably greater, since colonies appear to form clones by fragmentation. INTRODUCTION level fluctuations. It is proposed that small numbers of large, old genotypes could dominate populations to Descriptions of coral reefs often mention very large such an extent that those populations would not colonies, sometimes with speculation about their ages experience sufficient numbers of generations for com- (e.g. Wells 1957, Goreau et al. 1972), but the ecologi- pletion of directional evolutionary processes during cal, evolutionary and structural implications of large the persistence of particular habitats at a given sea size and extreme longevity are rarely discussed (but level. see Highsmith 1982). Some coral communities of the The major objective of this study was examination of Great Barrier Reef contain numerous large and pre- the structure of the Porites community on Pandora Reef sumably old colonies of Porites. -
Photographic Identification Guide to Some Common Marine Invertebrates of Bocas Del Toro, Panama
Caribbean Journal of Science, Vol. 41, No. 3, 638-707, 2005 Copyright 2005 College of Arts and Sciences University of Puerto Rico, Mayagu¨ez Photographic Identification Guide to Some Common Marine Invertebrates of Bocas Del Toro, Panama R. COLLIN1,M.C.DÍAZ2,3,J.NORENBURG3,R.M.ROCHA4,J.A.SÁNCHEZ5,A.SCHULZE6, M. SCHWARTZ3, AND A. VALDÉS7 1Smithsonian Tropical Research Institute, Apartado Postal 0843-03092, Balboa, Ancon, Republic of Panama. 2Museo Marino de Margarita, Boulevard El Paseo, Boca del Rio, Peninsula de Macanao, Nueva Esparta, Venezuela. 3Smithsonian Institution, National Museum of Natural History, Invertebrate Zoology, Washington, DC 20560-0163, USA. 4Universidade Federal do Paraná, Departamento de Zoologia, CP 19020, 81.531-980, Curitiba, Paraná, Brazil. 5Departamento de Ciencias Biológicas, Universidad de los Andes, Carrera 1E No 18A – 10, Bogotá, Colombia. 6Smithsonian Marine Station, 701 Seaway Drive, Fort Pierce, FL 34949, USA. 7Natural History Museum of Los Angeles County, 900 Exposition Boulevard, Los Angeles, California 90007, USA. This identification guide is the result of intensive sampling of shallow-water habitats in Bocas del Toro during 2003 and 2004. The guide is designed to aid in identification of a selection of common macroscopic marine invertebrates in the field and includes 95 species of sponges, 43 corals, 35 gorgonians, 16 nem- erteans, 12 sipunculeans, 19 opisthobranchs, 23 echinoderms, and 32 tunicates. Species are included here on the basis on local abundance and the availability of adequate photographs. Taxonomic coverage of some groups such as tunicates and sponges is greater than 70% of species reported from the area, while coverage for some other groups is significantly less and many microscopic phyla are not included.