Annual Report 2011–2012
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Cryptic Species Delimitation in the Southern Appalachian Antrodiaetus
Cryptic species delimitation in the southern Appalachian Antrodiaetus unicolor (Araneae: Antrodiaetidae) species complex using a 3RAD approach Lacie Newton1, James Starrett1, Brent Hendrixson2, Shahan Derkarabetian3, and Jason Bond4 1University of California Davis 2Millsaps College 3Harvard University 4UC Davis May 5, 2020 Abstract Although species delimitation can be highly contentious, the development of reliable methods to accurately ascertain species boundaries is an imperative step in cataloguing and describing Earth's quickly disappearing biodiversity. Spider species delimi- tation remains largely based on morphological characters; however, many mygalomorph spider populations are morphologically indistinguishable from each other yet have considerable molecular divergence. The focus of our study, Antrodiaetus unicolor species complex which contains two sympatric species, exhibits this pattern of relative morphological stasis with considerable genetic divergence across its distribution. A past study using two molecular markers, COI and 28S, revealed that A. unicolor is paraphyletic with respect to A. microunicolor. To better investigate species boundaries in the complex, we implement the cohesion species concept and employ multiple lines of evidence for testing genetic exchangeability and ecological interchange- ability. Our integrative approach includes extensively sampling homologous loci across the genome using a RADseq approach (3RAD), assessing population structure across their geographic range using multiple genetic clustering analyses that include STRUCTURE, PCA, and a recently developed unsupervised machine learning approach (Variational Autoencoder). We eval- uate ecological similarity by using large-scale ecological data for niche-based distribution modeling. Based on our analyses, we conclude that this complex has at least one additional species as well as confirm species delimitations based on previous less comprehensive approaches. -
Redalyc.Nidification of Polybia Rejecta (Hymenoptera: Vespidae)
Biota Neotropica ISSN: 1676-0611 [email protected] Instituto Virtual da Biodiversidade Brasil Magalhães de Souza, Marcos; Porfiro Pires, Epifânio; Prezoto, Fábio Nidification of Polybia rejecta (Hymenoptera: Vespidae) associated to Azteca chartifex (Hymenoptera: Formicidae) in a fragment of Atlantic Forest, in the state of Minas Gerais, southeastern Brazil Biota Neotropica, vol. 13, núm. 3, julio-septiembre, 2013, pp. 390-392 Instituto Virtual da Biodiversidade Campinas, Brasil Available in: http://www.redalyc.org/articulo.oa?id=199128991038 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Biota Neotrop., vol. 13, no. 3 Nidification of Polybia rejecta (Hymenoptera: Vespidae) associated to Azteca chartifex (Hymenoptera: Formicidae) in a fragment of Atlantic Forest, in the state of Minas Gerais, southeastern Brazil Marcos Magalhães de Souza1, Epifânio Porfiro Pires2,4 & Fábio Prezoto3 1Instituto Federal de Educação, Ciência e Tecnologia do Sul de Minas – IFSULDEMINAS, Campus Inconfidentes, CEP 37576-000, Inconfidentes, MG, Brazil 2Departamento de Entomologia, Universidade Federal de Lavras – UFLA, CEP 37200-000, Lavras, MG, Brazil 3Departamento de Zoologia, Universidade Federal de Juiz de Fora – UFJF, CEP 36036-900, Juiz de Fora, MG, Brazil 4Corresponding author: Epifânio Porfiro Pires, e-mail: [email protected] -
Eleven Immigrants Honored for Their Selfless Contributions to Society
442 Main Street, Malden, MA 02148 Tel (781) 322-9777 Fax (781) 321-1963 www.ilctr.org Diane Portnoy President and CEO Eleven Immigrants Honored for Their Selfless Contributions to Society MALDEN, Mass, August, 12 2013 / The Immigrant Learning Center, Inc. (ILC) added 11 profiles of immigrants who founded U.S.-based, not-for-profit organizations to a new Social Entrepreneur section of its online Immigrant Entrepreneur Hall of Fame. The Hall of Fame was launched in 2012 to honor the entrepreneurial spirit of immigrants in the U.S. and pay tribute to individual immigrants who have made significant contributions to American society. These 11 social entrepreneurs are shining examples of how the drive and spirit of American immigrants can be used to benefit others. Two of the nation’s most influential environmental organizations were founded by immigrants. John Muir, an immigrant from Scotland, co-founded the Sierra Club, and Dennis Puleston, an immigrant from England, co-founded the Environmental Defense Fund. The efforts of these men led to the passage of significant environmental protection laws and the implementation of the National Park system. Three U.S. immigrants have impacted many thousands of lives around the world through prestigious international aid organizations. Bernard Amadei, an immigrant from France, founded Engineers Without Borders. Zainab Salbi, an immigrant from Iraq, co-founded Women for Women International, and Elizabeth Silverstein, an immigrant from Austria, co-founded Counterpart International. The field of medical research has benefited greatly from the efforts of immigrants. In particular, Michael J. Fox, an immigrant from Canada, founded the Michael J. -
Final Project Completion Report
CEPF SMALL GRANT FINAL PROJECT COMPLETION REPORT Organization Legal Name: - Tarantula (Araneae: Theraphosidae) spider diversity, distribution and habitat-use: A study on Protected Area adequacy and Project Title: conservation planning at a landscape level in the Western Ghats of Uttara Kannada district, Karnataka Date of Report: 18 August 2011 Dr. Manju Siliwal Wildlife Information Liaison Development Society Report Author and Contact 9-A, Lal Bahadur Colony, Near Bharathi Colony Information Peelamedu Coimbatore 641004 Tamil Nadu, India CEPF Region: The Western Ghats Region (Sahyadri-Konkan and Malnad-Kodugu Corridors). 2. Strategic Direction: To improve the conservation of globally threatened species of the Western Ghats through systematic conservation planning and action. The present project aimed to improve the conservation status of two globally threatened (Molur et al. 2008b, Siliwal et al., 2008b) ground dwelling theraphosid species, Thrigmopoeus insignis and T. truculentus endemic to the Western Ghats through systematic conservation planning and action. Investment Priority 2.1 Monitor and assess the conservation status of globally threatened species with an emphasis on lesser-known organisms such as reptiles and fish. The present project was focused on an ignored or lesser-known group of spiders called Tarantulas/ Theraphosid spiders and provided valuable information on population status and potential conservation sites in Uttara Kannada district, which will help in future monitoring and assessment of conservation status of the two globally threatened theraphosid species T. insignis and Near Threatened T. truculentus. Investment Priority 2.3. Evaluate the existing protected area network for adequate globally threatened species representation and assess effectiveness of protected area types in biodiversity conservation. -
K1 Timer with Remote Start Switch Instructions
Micro Wizard Instructions How to install your Fast Track flashing light display timer model K1 with optional remote start switch (If you have ordered the Quick Mount or have a Best Track, disregard this section and refer to the mounting instruction sheet for installing your timer) Enclosed you will find the Fast Track finish tine, remote start switch, a computer interface cable and USB converter* , AC adapter (and any options ordered). The Fast Track finish line contains all the electronics, sensors and displays for the Fast Track system. To install the Fast Track finish line to your track, mark the finish line on your track with a pencil. Now mark the midpoint of each lane where it crosses the finish line. These marks should align with the location of the sensors in the bottom rail of your Fast Track timer, which was manufactured according to the track measurements provided on the order form. Next, measure from the nearest sensor to the mounting screws. Mark this spot where it crosses the finish line. This marks the spot to put the mounting screws. The other marks are for the sensors that are mounted in the bottom rail of the Fast Track finish line. Now carefully drill these marks in the finish line of your track with a 3/16 inch drill bit. The sensor holes should be in the middle of each lane. The two other holes are for mounting and should be countersunk with a 1/4 inch bit so that the mounting screws are flush with the surface of the track. -
Report Booklet
MEASURABLE IMPACT ON THE ADVANCEMENT OF SCIENCE IN AMERICA About Us ARCS Foundation is a nonprofit organization founded and Since its founding in 1958, ARCS Foundation has grown to 16 chapters administered entirely by women who see a national problem nationally and invested more than $91 million in the potential of nearly and are taking the initiative to try to solve it. The organization’s 9,000 of the most outstanding American graduate and undergraduate aim is to address this country's most critical competitiveness Scholars in science, engineering and medical research at 54 of the issue: the serious shortage of American scientists and country's top research universities. Since 1985, the San Diego chapter engineers. We address this issue by providing financial awards alone has contributed nearly $9 million in support of Scholars at our and encouragement to men and women working to complete four ARCS-approved recipient institutions: their degrees in science, engineering, and medical research. San Diego State University • The Scripps Research Institute University of California, San Diego • University of San Diego We are very proud of what ARCS Foundation has accomplished. We know that we have a mission that is important to our country's economic recovery, our global technological leadership, and ultimately the well-being and quality of life for all people. ARCS San Diego Chapter 2015-2016 ARCS Mission President – Mary Fitz ARCS Foundation advances Immediate Past President – Diane Annala Chalmers science and technology in the United States by providing financial awards to academically outstanding U.S. citizens studying to complete degrees in science, engineering and medical research. -
Azteca Ants Maintain Unique Microbiomes Across Functionally
Azteca ants maintain unique microbiomes royalsocietypublishing.org/journal/rspb across functionally distinct nest chambers Jane M. Lucas1, Anne A. Madden2, Clint A. Penick3, Mary Jane Epps5, Peter R. Marting4, Julia L. Stevens6, Daniel J. Fergus2, Robert R. Dunn2,7 Research and Emily K. Meineke8 1 Cite this article: Lucas JM, Madden AA, Department of Soil and Water Systems, University of Idaho, Moscow, ID 83844, USA 2Department of Applied Ecology, North Carolina State University, Raleigh, NC 27695, USA Penick CA, Epps MJ, Marting PR, Stevens JL, 3The Biomimicry Center, and 4School of Life Sciences, Arizona State University, Tempe, AZ 85287, USA Fergus DJ, Dunn RR, Meineke EK. 2019 Azteca 5Department of Biology, Mary Baldwin University, Staunton, VA 24401, USA 6 ants maintain unique microbiomes across Bayer Crop Science Division, Saint Louis, MO 63146, USA 7Natural History Museum, University of Copenhagen, DK-2100 Copenhagen, Denmark functionally distinct nest chambers. 8Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, MA 02138, USA Proc. R. Soc. B 286: 20191026. JML, 0000-0002-3931-1864; AAM, 0000-0002-7263-5713; CAP, 0000-0002-5368-507X; http://dx.doi.org/10.1098/rspb.2019.1026 RRD, 0000-0002-6030-4837 The microbiome of built structures has considerable influence over an inhabitant’s well-being, yet the vast majority of research has focused on Received: 2 May 2019 human-built structures. Ants are well-known architects, capable of con- Accepted: 12 July 2019 structing elaborate dwellings, the microbiome of which is underexplored. Here, we explore the bacterial and fungal microbiomes in functionally dis- tinct chambers within and outside the nests of Azteca alfari ants in Cecropia peltata trees. -
Operator's Manual
Operator’s Manual FinishLynx 32 Lynx System Developers, Inc. 175 N New Boston Street, Woburn, MA 01801 http://www.finishlynx.com Important Notice Use of FinishLynx is governed by the Sales and License Agreement signed by you or your agent (the “Buyer”), Section 7a of which is reprinted below: 7a.Ownership of Software. Lynx System Developers, Inc. (Lynx) owns and retains all title, copyright, trademark, and other proprietary rights in the software, firmware and documentation provided with the software and firmware (collectively, “Software”). Buyer acknowledges that the Software is the confidential property of Lynx and the Buyer will not disclose the Software to any other person without Lynx’s consent. FinishLynx™, Etherlynx™, CyberScoreboard™, ReacTime™ and the FinishLynx logo are registered trademarks of Lynx System Developers, Inc. SeriaLynx, FieldLynx, LaserLynx, InterLynx, ClerkLynx, Exchange, ResulTV, LynxTV and AirLynx are trademarks of Lynx System Developers, Inc. Windows 95, Windows 98, Windows 2000, Windows ME and Windows NT are registered trademarks of Microsoft Corp. Photoshop and PostScript are registered trademarks of Adobe Systems Incorporated. Palm OS, Palm Computing, Graffiti, HotSync, are registered trademarks of Palm, Inc. Palm, the Palm logo, the HotSync logo are trademarks of Palm, Inc. All other trademarks are properties of their respective companies. The following statement applies to the Independent JPEG Group's software which is included with FinishLynx 32. The authors make NO WARRANTY or representation, either express or implied, with respect to this software, its quality, accuracy, merchantability, or fitness for a particular purpose. This software is provided "AS IS", and you, its user, assume the entire risk as to its quality and accuracy. -
Species Are Hypotheses: Avoid Connectivity Assessments Based on Pillars of Sand Eric Pante, Nicolas Puillandre, Amélia Viricel, Sophie Arnaud-Haond, D
Species are hypotheses: avoid connectivity assessments based on pillars of sand Eric Pante, Nicolas Puillandre, Amélia Viricel, Sophie Arnaud-Haond, D. Aurelle, Magalie Castelin, Anne Chenuil, Christophe Destombe, Didier Forcioli, Myriam Valero, et al. To cite this version: Eric Pante, Nicolas Puillandre, Amélia Viricel, Sophie Arnaud-Haond, D. Aurelle, et al.. Species are hypotheses: avoid connectivity assessments based on pillars of sand. Molecular Ecology, Wiley, 2015, 24 (3), pp.525-544. hal-02002440 HAL Id: hal-02002440 https://hal.archives-ouvertes.fr/hal-02002440 Submitted on 31 Jan 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Molecular Ecology Species are hypotheses : avoid basing connectivity assessments on pillars of sand. Journal:For Molecular Review Ecology Only Manuscript ID: Draft Manuscript Type: Invited Reviews and Syntheses Date Submitted by the Author: n/a Complete List of Authors: Pante, Eric; UMR 7266 CNRS - Université de La Rochelle, Puillandre, Nicolas; MNHN, Systematique & Evolution Viricel, Amélia; UMR 7266 CNRS - -
A Stable Phylogenomic Classification of Travunioidea (Arachnida, Opiliones, Laniatores) Based on Sequence Capture of Ultraconserved Elements
A stable phylogenomic classification of Travunioidea (Arachnida, Opiliones, Laniatores) based on sequence capture of ultraconserved elements The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Derkarabetian, Shahan, James Starrett, Nobuo Tsurusaki, Darrell Ubick, Stephanie Castillo, and Marshal Hedin. 2018. “A stable phylogenomic classification of Travunioidea (Arachnida, Opiliones, Laniatores) based on sequence capture of ultraconserved elements.” ZooKeys (760): 1-36. doi:10.3897/zookeys.760.24937. http://dx.doi.org/10.3897/zookeys.760.24937. Published Version doi:10.3897/zookeys.760.24937 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:37298544 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA A peer-reviewed open-access journal ZooKeys 760: 1–36 (2018) A stable phylogenomic classification of Travunioidea... 1 doi: 10.3897/zookeys.760.24937 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research A stable phylogenomic classification of Travunioidea (Arachnida, Opiliones, Laniatores) based on sequence capture of ultraconserved elements Shahan Derkarabetian1,2,7 , James Starrett3, Nobuo Tsurusaki4, Darrell Ubick5, Stephanie Castillo6, Marshal Hedin1 1 Department of Biology, San Diego State University, San -
Biobasics Contents
Illinois Biodiversity Basics a biodiversity education program of Illinois Department of Natural Resources Chicago Wilderness World Wildlife Fund Adapted from Biodiversity Basics, © 1999, a publication of World Wildlife Fund’s Windows on the Wild biodiversity education program. For more information see <www.worldwildlife.org/windows>. Table of Contents About Illinois Biodiversity Basics ................................................................................................................. 2 Biodiversity Background ............................................................................................................................... 4 Biodiversity of Illinois CD-ROM series ........................................................................................................ 6 Activities Section 1: What is Biodiversity? ...................................................................................................... 7 Activity 1-1: What’s Your Biodiversity IQ?.................................................................... 8 Activity 1-2: Sizing Up Species .................................................................................... 19 Activity 1-3: Backyard BioBlitz.................................................................................... 31 Activity 1-4: The Gene Scene ....................................................................................... 43 Section 2: Why is Biodiversity Important? .................................................................................... 61 Activity -
Phylogenomic Analysis and Revised Classification of Atypoid Mygalomorph Spiders (Araneae, Mygalomorphae), with Notes on Arachnid Ultraconserved Element Loci
Phylogenomic analysis and revised classification of atypoid mygalomorph spiders (Araneae, Mygalomorphae), with notes on arachnid ultraconserved element loci Marshal Hedin1, Shahan Derkarabetian1,2,3, Adan Alfaro1, Martín J. Ramírez4 and Jason E. Bond5 1 Department of Biology, San Diego State University, San Diego, CA, United States of America 2 Department of Biology, University of California, Riverside, Riverside, CA, United States of America 3 Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, Cambridge, MA, United States of America 4 Division of Arachnology, Museo Argentino de Ciencias Naturales ``Bernardino Rivadavia'', Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina 5 Department of Entomology and Nematology, University of California, Davis, CA, United States of America ABSTRACT The atypoid mygalomorphs include spiders from three described families that build a diverse array of entrance web constructs, including funnel-and-sheet webs, purse webs, trapdoors, turrets and silken collars. Molecular phylogenetic analyses have generally supported the monophyly of Atypoidea, but prior studies have not sampled all relevant taxa. Here we generated a dataset of ultraconserved element loci for all described atypoid genera, including taxa (Mecicobothrium and Hexurella) key to understanding familial monophyly, divergence times, and patterns of entrance web evolution. We show that the conserved regions of the arachnid UCE probe set target exons, such that it should be possible to combine UCE and transcriptome datasets in arachnids. We also show that different UCE probes sometimes target the same protein, and under the matching parameters used here show that UCE alignments sometimes include non- Submitted 1 February 2019 orthologs. Using multiple curated phylogenomic matrices we recover a monophyletic Accepted 28 March 2019 Published 3 May 2019 Atypoidea, and reveal that the family Mecicobothriidae comprises four separate and divergent lineages.