Phytoremediation with Geosiphon-Like Symbiosis?
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The Obligate Endobacteria of Arbuscular Mycorrhizal Fungi Are Ancient Heritable Components Related to the Mollicutes
The ISME Journal (2010) 4, 862–871 & 2010 International Society for Microbial Ecology All rights reserved 1751-7362/10 $32.00 www.nature.com/ismej ORIGINAL ARTICLE The obligate endobacteria of arbuscular mycorrhizal fungi are ancient heritable components related to the Mollicutes Maria Naumann1,2, Arthur Schu¨ ler2 and Paola Bonfante1 1Department of Plant Biology, University of Turin and IPP-CNR, Turin, Italy and 2Department of Biology, Inst. Genetics, University of Munich (LMU), Planegg-Martinsried, Germany Arbuscular mycorrhizal fungi (AMF) have been symbionts of land plants for at least 450 Myr. It is known that some AMF host in their cytoplasm Gram-positive endobacteria called bacterium-like organisms (BLOs), of unknown phylogenetic origin. In this study, an extensive inventory of 28 cultured AMF, from diverse evolutionary lineages and four continents, indicated that most of the AMF species investigated possess BLOs. Analyzing the 16S ribosomal DNA (rDNA) as a phylogenetic marker revealed that BLO sequences from divergent lineages all clustered in a well- supported monophyletic clade. Unexpectedly, the cell-walled BLOs were shown to likely represent a sister clade of the Mycoplasmatales and Entomoplasmatales, within the Mollicutes, whose members are lacking cell walls and show symbiotic or parasitic lifestyles. Perhaps BLOs maintained the Gram-positive trait whereas the sister groups lost it. The intracellular location of BLOs was revealed by fluorescent in situ hybridization (FISH), and confirmed by pyrosequencing. BLO DNA could only be amplified from AMF spores and not from spore washings. As highly divergent BLO sequences were found within individual fungal spores, amplicon libraries derived from Glomus etunicatum isolates from different geographic regions were pyrosequenced; they revealed distinct sequence compositions in different isolates. -
Occurrence of Glomeromycota Species in Aquatic Habitats: a Global Overview
Occurrence of Glomeromycota species in aquatic habitats: a global overview MARIANA BESSA DE QUEIROZ1, KHADIJA JOBIM1, XOCHITL MARGARITO VISTA1, JULIANA APARECIDA SOUZA LEROY1, STEPHANIA RUTH BASÍLIO SILVA GOMES2, BRUNO TOMIO GOTO3 1 Programa de Pós-Graduação em Sistemática e Evolução, 2 Curso de Ciências Biológicas, and 3 Departamento de Botânica e Zoologia, Universidade Federal do Rio Grande do Norte, Campus Universitário, 59072-970, Natal, RN, Brazil * CORRESPONDENCE TO: [email protected] ABSTRACT — Arbuscular mycorrhizal fungi (AMF) are recognized in terrestrial and aquatic ecosystems. The latter, however, have received little attention from the scientific community and, consequently, are poorly known in terms of occurrence and distribution of this group of fungi. This paper provides a global list on AMF species inhabiting aquatic ecosystems reported so far by scientific community (lotic and lentic freshwater, mangroves, and wetlands). A total of 82 species belonging to 5 orders, 11 families, and 22 genera were reported in 8 countries. Lentic ecosystems have greater species richness. Most studies of the occurrence of AMF in aquatic ecosystems were conducted in the United States and India, which constitute 45% and 78% reports coming from temperate and tropical regions, respectively. KEY WORDS — checklist, flooded areas, mycorrhiza, taxonomy Introduction Aquatic ecosystems comprise about 77% of the planet surface (Rebouças 2006) and encompass a diversity of habitats favorable to many species from marine (ocean), transitional estuaries to continental (wetlands, lentic and lotic) environments (Reddy et al. 2018). Despite this territorial representativeness and biodiversity already recorded, there are gaps when considering certain types of organisms, e.g. fungi. Fungi are considered a common and important component of almost all trophic levels. -
How to Cite Complete Issue More Information About This Article
Revista mexicana de biodiversidad ISSN: 1870-3453 ISSN: 2007-8706 Instituto de Biología Álvarez-Lopeztello, Jonás; Hernández-Cuevas, Laura V.; Castillo, Rafael F. del; Robles, Celerino Second world record of Glomus trufemii (Glomeromycota: Fungi), an arbuscular mycorrhizal fungus from a Mexican savanna Revista mexicana de biodiversidad, vol. 89, no. 1, 2018, pp. 298-300 Instituto de Biología DOI: 10.22201/ib.20078706e.2018.1.2101 Available in: http://www.redalyc.org/articulo.oa?id=42559253025 How to cite Complete issue Scientific Information System Redalyc More information about this article Network of Scientific Journals from Latin America and the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Project academic non-profit, developed under the open access initiative Revista Mexicana de Biodiversidad 89 (2018): 298-300 Research note Second world record of Glomus trufemii (Glomeromycota: Fungi), an arbuscular mycorrhizal fungus from a Mexican savanna Segundo registro mundial de Glomus trufemii (Glomeromycota: Fungi), un hongo micorrízico arbuscular de una sabana mexicana Jonás Álvarez-Lopeztello a, Laura V. Hernández-Cuevas b, *, Rafael F. del Castillo a, Celerino Robles a a Centro Interdisciplinario de Investigación para el Desarrollo Integral Regional, Oaxaca, Instituto Politécnico Nacional, Hornos 1003, 71230 Santa Cruz Xoxocotlán, Oaxaca, Mexico b Centro de Investigación en Genética y Ambiente, Universidad Autónoma de Tlaxcala, Km 10.5 Autopista Texmelucan-Tlaxcala, 90120 Ixtacuixtla, Tlaxcala, Mexico *Corresponding author: [email protected] (L.V. Hernández-Cuevas) Received: 25 January 2017; accepted: 07 September 2017 Abstract In Mexico, studies of diversity of arbuscular mycorrhizal fungi (AMF) are still scarce. Here we report the second record in the world, and the first record in Mexico of Glomus trufemii (Glomeraceae) from a tropical humid savanna. -
Fungi, Glomeromycota, Glomerales) As Being of Neuter Gender
TAXON 58 (2) • May 2009: 647 Kuyper • (1888) Conserve Glomus PROPOSALS TO CONSERVE OR REJECT NAMES Edited by John McNeill, Scott A. Redhead & John H. Wiersema (1888) Proposal to conserve the name Glomus (Fungi, Glomeromycota, Glomerales) as being of neuter gender Thomas W. Kuyper Department of Soil Quality, Wageningen University, P.O. Box 47, 6700 AA Wageningen, The Netherlands. [email protected] (1888) Glomus Tul. & C. Tul. in Giorn. Bot. Ital. Anno 1, griseus” respectively, and continues to use the masculine 2(1): 63. 11 Mai 1845, nom. et gen. neut. cons. prop. form, whereas new species in the genus Tuber, which they Typus: G. macrocarpum Tul. & C. Tul. (‘macro- treated as neuter, the diagnosis starts as “mediocre globo- carpus’) sum”, “globosum” and “rotundatum”. Which gender should The majority of plant species form mycorrhiza, a mu- then be correct? Article 62 of the ICBN (McNeill & al. in tually beneficial symbiosis between plant roots and certain Regnum Veg. 146. 2006) provides the answer to that ques- root-inhabiting fungi. The presence and type of mycorrhiza tion. The article mentions three criteria in descending order is also an important character in plant taxonomy and phy- of importance, viz., botanical tradition, the author’s original logeny. The arbuscular mycorrhizal association is by far usage, and classical usage (even though Note 1 tries to link the most important kind of these symbioses. Evolution of original usage and classical usage, which is a bit confusing the group made the conquest of the land by the first root- in an otherwise clear rule). I have been unable to find in- less plants possible. -
The Vicia Faba Leghemoglobin Gene Vflb29 Is Induced in Root Nodules and in Roots Colonized by the Arbuscular Mycorrhizal Fungus Glomus Fasciculatum
MPMI Vol. 10, No. 1, 1997, pp. 124-131. Publication no. M-1996-1209-01R. © 1997 The American Phytopathological Society The Vicia faba Leghemoglobin Gene VfLb29 Is Induced in Root Nodules and in Roots Colonized by the Arbuscular Mycorrhizal Fungus Glomus fasciculatum Martin Frühling,1 Hélène Roussel,2 Vivienne Gianinazzi-Pearson,2 Alfred Pühler,1 and Andreas M. Perlick1 1Universität Bielefeld, Lehrstuhl für Genetik, Postfach 100131, D-33501 Bielefeld, Germany; 2Station de Génétique et d’Amélioration des Plantes, INRA, BV 1540, F-21034 Dijon cédex, France Received 11 July 1996. Accepted 30 October 1996. To investigate similarities between symbiotic interactions linked to proliferation of the microsymbiont and its develop- of broad bean (Vicia faba) with rhizobia and mycorrhizal ment into pleomorphic intracellular forms, the bacteroids in fungi, plant gene expression induced by both microsymbi- nodules and the arbuscules in mycorrhiza. Both bacteroids and onts was compared. We demonstrated the exclusive ex- arbuscules are separated from the plant cytoplasm by a host- pression of 19 broad bean genes, including VfENOD2, derived perisymbiotic membrane (Mellor 1989). The peribac- VfENOD5, VfENOD12 and three different leghemoglobin teroid membrane (in nodules) and the periarbuscular mem- genes, in root nodules. In contrast, the leghemoglobin gene brane (in mycorrhiza) are suggested to be extended interfaces VfLb29 was found to be induced not only in root nodules, between the symbiotic partners where bidirectional exchange but also in broad bean roots colonized by the mycorrhizal of metabolites takes place (Smith and Smith 1990). fungus Glomus fasciculatum. In uninfected roots, none of The development of an effective, nitrogen-fixing symbiosis the 20 nodulin transcripts investigated was detectable. -
Potential of Microbial Diversity of Coastal Sand Dunes: Need for Exploration in Odisha Coast of India
Hindawi e Scientific World Journal Volume 2019, Article ID 2758501, 9 pages https://doi.org/10.1155/2019/2758501 Review Article Potential of Microbial Diversity of Coastal Sand Dunes: Need for Exploration in Odisha Coast of India Shubhransu Nayak , Satyaranjan Behera, and Prasad Kumar Dash Odisha Biodiversity Board, Regional Plant Resource Centre Campus, Ekamra Kanan, Nayapalli, Bhubaneswar , Odisha, India Correspondence should be addressed to Shubhransu Nayak; [email protected] Received 10 April 2019; Accepted 2 July 2019; Published 14 July 2019 Academic Editor: Jesus L. Romalde Copyright © 2019 Shubhransu Nayak et al. Tis is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Coastal sand dunes are hips and strips formed by sand particles which are eroded and ground rock, derived from terrestrial and oceanic sources. Tis is considered as a specialized ecosystem characterized by conditions which are hostile for life forms like high salt, low moisture, and low organic matter content. However, dunes are also inhabited by diverse groups of fora, fauna, and microorganisms specifcally adapted to these situations. Microbial groups like fungi, bacteria, and actinobacteria are quite abundant in the rhizosphere, phyllosphere, and inside plants which are very much essential for the integration of dunes. Microorganisms in this ecosystem have been found to produce a number of bioactive metabolites which are of great importance to agriculture and industries. Many species of arbuscular mycorrhizal fungi and Rhizobia associated with the roots of dune fora are prolifc producers of plant growth promoting biochemicals like indole acetic acid. -
Morphological and Molecular Evidence of Arbuscular Mycorrhizal Fungal Associations in Costa Rican Epiphytic Bromeliads1
BIOTROPICA 37(2): 245–250 2005 10.1111/j.1744-7429.2005.00033.x Morphological and Molecular Evidence of Arbuscular Mycorrhizal Fungal Associations in Costa Rican Epiphytic Bromeliads1 Annette R. Rowe2 and Anne Pringle Department of Plant and Microbial Biology, 111 Koshland Hall, University of California, Berkeley, California 94720-3102, U.S.A. ABSTRACT Arbuscular mycorrhizal fungi influence the growth, morphology, and fitness of a variety of plant species, but little is known of the arbuscular mycorrhizal (AM) fungal associations of plant species in forest canopies. Plant species’ associations with AM fungi are most often elucidated by examining the roots for fungal structures; however, morphological data may provide a limited resolution on a plant’s mycorrhizal status. We combined a traditional staining technique with a molecular marker (the 18S ribosomal gene) to determine whether or not a variety of epiphytic bromeliads form arbuscular mycorrhizal fungal associations. Using these methods we show that the epiphytic bromeliad Vriesea werkleana forms arbuscular mycorrhizal fungal associations with members of the genus Glomus. AM fungal sequences of this plant species formed three distinct clades nested within a larger Glomus clade; two of the clades did not group with any previously sequenced lineage of Glomus. Novel clades may represent novel species. Although Vriesea werkleana is associated with multiple AM fungal species, each individual plant is colonized by a single lineage. The combination of morphological and molecular methods provides a practical approach to the characterization of the mycorrhizal status of epiphytic bromeliads, and perhaps other tropical epiphytes. Key words: cloud forest; Costa Rica; Monteverde; symbiosis; tropical mycorrhizae; VAM fungi. -
Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes
University of Rhode Island DigitalCommons@URI Biological Sciences Faculty Publications Biological Sciences 9-26-2018 Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes Christopher E. Lane Et Al Follow this and additional works at: https://digitalcommons.uri.edu/bio_facpubs Journal of Eukaryotic Microbiology ISSN 1066-5234 ORIGINAL ARTICLE Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes Sina M. Adla,* , David Bassb,c , Christopher E. Laned, Julius Lukese,f , Conrad L. Schochg, Alexey Smirnovh, Sabine Agathai, Cedric Berneyj , Matthew W. Brownk,l, Fabien Burkim,PacoCardenas n , Ivan Cepi cka o, Lyudmila Chistyakovap, Javier del Campoq, Micah Dunthornr,s , Bente Edvardsent , Yana Eglitu, Laure Guillouv, Vladimır Hamplw, Aaron A. Heissx, Mona Hoppenrathy, Timothy Y. Jamesz, Anna Karn- kowskaaa, Sergey Karpovh,ab, Eunsoo Kimx, Martin Koliskoe, Alexander Kudryavtsevh,ab, Daniel J.G. Lahrac, Enrique Laraad,ae , Line Le Gallaf , Denis H. Lynnag,ah , David G. Mannai,aj, Ramon Massanaq, Edward A.D. Mitchellad,ak , Christine Morrowal, Jong Soo Parkam , Jan W. Pawlowskian, Martha J. Powellao, Daniel J. Richterap, Sonja Rueckertaq, Lora Shadwickar, Satoshi Shimanoas, Frederick W. Spiegelar, Guifre Torruellaat , Noha Youssefau, Vasily Zlatogurskyh,av & Qianqian Zhangaw a Department of Soil Sciences, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, S7N 5A8, SK, Canada b Department of Life Sciences, The Natural History Museum, Cromwell Road, London, SW7 5BD, United Kingdom -
Association of Arbuscular Mycorrhizal Fungi with Plants of Coastal Sand Dunes of West Coast of India
BEENA, ARUN, RAVIRAJA AND SRIDHAR 213 Tropical Ecology 42(2): 213-222, 2001 ISSN 0564-3295 © International Society for Tropical Ecology Association of arbuscular mycorrhizal fungi with plants of coastal sand dunes of west coast of India K.R. BEENA, A.B. ARUN, N.S. RAVIRAJA & K.R. SRIDHAR1 Department of Biosciences, Mangalore University, Mangalagangotri - 574 199, Mangalore, Karnataka, India Abstract: An inventory of arbuscular mycorrhizal (AM) fungal status of 28 plant species belonging to 14 families established on the coastal sand dunes of southwest coast of India was performed. Roots of 23 plant species were colonized by AM fungi, whereas the rhizosphere of only 20 plant species possessed AM fungal spores. Canavalia cathartica had the highest root colonization (83%) by AM, while the rhizosphere of Borreria articularis had the highest number of AM spores (1.6 g-1). Among 30 AM fungi recovered, Scutellospora erythropa showed a wide host range (colonized 13 plant species), while Scutellospora gregaria had high spore abundance per plant species (12.75). The mean species richness on the west coast dunes was 4.4, highest being in Ipomoea pes-caprae (11). Among the mat-forming creepers, the AM fungal diversity was highest in Alysicarpus rugosus. Resumen: Se realizó un inventario de la condición respecto a hongos micorrízicos arbus- culares (MA) para 28 especies pertenecientes a 14 familias establecidas en las dunas costeras arenosas de la costa sudoccidental de la India. Las raíces de 23 especies vegetales estuvieron colonizadas por hongos MA, mientras que la rizosfera de sólo 20 especies de plantas contuvo esporas de hongos MA. -
Abstract Phylogenetic Analysis of the Symbiotic
ABSTRACT PHYLOGENETIC ANALYSIS OF THE SYMBIOTIC NOSTOC CYANOBACTERIA AS ASSESSED BY THE NITROGEN FIXATION (NIFD) GENE by Hassan S. Salem Members of the genus Nostoc are the most commonly encountered cyanobacterial partners in terrestrial symbiotic systems. The objective of this study was to determine the taxonomic position of the various symbionts within the genus Nostoc, in addition to examining the evolutionary relationships between symbiont and free-living strains within the genus by analyzing the complete sequences of the nitrogen fixation (nif) genes. NifD was sequenced from thirty-two representative strains, and phylogenetically analyzed using the Maximum likelihood and Bayesian criteria. Such analyses indicate at least three well-supported clusters exist within the genus, with moderate bootstrap support for the differentiation between symbiont and free-living strains. Our analysis suggests 2 major patterns for the evolution of symbiosis within the genus Nostoc. The first resulting in the symbiosis with a broad range of plant groups, while the second exclusively leads to a symbiotic relationship with the aquatic water fern, Azolla. PHYLOGENETIC ANALYSIS OF THE SYMBIOTIC NOSTOC CYANOBACTERIA AS ASSESSED BY THE NITROGEN FIXATION (NIFD) GENE A Thesis Submitted to the Faculty of Miami University in partial fulfillment of the requirements for the degree of Master of Science Department of Botany by Hassan S. Salem Miami University Oxford, Ohio 2010 Advisor________________________ (Susan Barnum) Reader_________________________ (Nancy Smith-Huerta) -
Glomus Drummondii and G. Walkeri, Two New Species of Arbuscular Mycorrhizal Fungi (Glomeromycota)
mycological research 110 (2006) 555–566 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres Glomus drummondii and G. walkeri, two new species of arbuscular mycorrhizal fungi (Glomeromycota) Janusz BqASZKOWSKIa,*, Carsten RENKERb,y, Franc¸ois BUSCOTb,y aDepartment of Plant Pathology, University of Agriculture, Słowackiego 17, PL-71434 Szczecin, Poland bTerrestrial Ecology, Institute of Botany, University of Leipzig, Johannisallee 21, D-04103 Leipzig, Germany article info abstract Article history: Two new ectocarpic arbuscular mycorrhizal fungal species, Glomus drummondii and G. wal- Received 26 July 2005 keri (Glomeromycota), found in maritime sand dunes of northern Poland and those adjacent Received in revised form to the Mediterranean Sea are described and illustrated. Mature spores of G. drummondii are 22 January 2006 pastel yellow to maize yellow, globose to subglobose, (58–)71(–85) mm diam, or ovoid, 50– Accepted 2 February 2006 80 Â 63–98 mm. Their wall consists of three layers: an evanescent, hyaline, short-lived out- Corresponding Editor: Pada Borgante ermost layer, a laminate, smooth, pastel yellow to maize yellow middle layer, and a flexible, smooth, hyaline innermost layer. Spores of G. walkeri are white to pale yellow, globose to Keywords: subglobose, (55–)81(–95) mm diam, or ovoid, 60–90 Â 75–115 mm, and have a spore wall com- AM fungi posed of three layers: a semi-permanent, hyaline outermost layer, a laminate, smooth, Molecular phylogeny white to pale yellow middle layer, and a flexible, smooth, hyaline innermost layer. In Melz- Systematics er’s reagent, only the inner- and outermost layers stain reddish white to greyish rose in G. -
Cyanobacteria in Terrestrial Symbiotic Systems
Cyanobacteria in Terrestrial Symbiotic Systems Jouko Rikkinen Abstract Filamentous cyanobacteria are important primary producers and N2 fixers in many terrestrial environments. As reduced nitrogen is often limiting, some thalloid liverworts (Marchantiophyta), hornworts (Anthocerophyta), the water fern Azolla (Salviniales), cycads (Cycadophyta), and the angiosperm Gunnera (Gunnerales) have evolved the ability to establish stable and structurally well-defined symbioses with N2-fixing cyanobacteria. Also a wide diversity of lichen-forming fungi have cyanobacteria as photosynthetic symbionts or as N2-fixing symbionts. Cyanolichen symbioses have evolved independently in different fungal lineages, and evolution has often resulted in convergent morphologies in distantly related groups. DNA techniques have provided a wealth of new information on the diversity of symbiotic cyanobacteria and their hosts. The fact that many plants and fungi engage in many different symbioses simultaneously underlines the probable significance of diffuse evolutionary relationships between different symbiotic systems, including cyanobacterial and mycorrhizal associations. This review introduces the reader to recent research on symbiotic cyanobacteria in terrestrial ecosystems and shortly describes the astonishing range of diversity in these ecologically important associations. Introduction Mutually beneficial symbiotic interactions are an inherent feature of most ecological communities. Nitrogen is essential for growth of land plants, but the availability of reduced nitrogen in the soil is often limiting. Diazotrophic bacteria are able to convert atmospheric dinitrogen (N2) to ammonia (NH3) that can be utilized by plants, and consequently, numerous land plants form an association with N2-fixing bacteria. These interactions include the morphologically and physiologically highly coevolved symbioses between legumes and rhizobia, between actinorhizal plants and Frankia, and a plethora of more casual associations between plants and prokaryotic diazotrophs (Bothe et al.