Ribonucleotide Reductase Large Subunit (RRM1) As a Novel Therapeutic Target

Total Page:16

File Type:pdf, Size:1020Kb

Ribonucleotide Reductase Large Subunit (RRM1) As a Novel Therapeutic Target Author Manuscript Published OnlineFirst on April 25, 2017; DOI: 10.1158/1078-0432.CCR-17-0263 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. 1 Clinical Cancer Research Ver3.0 (revised) 2 Research Article: Biology of Human tumors 3 Title: Ribonucleotide reductase large subunit (RRM1) as a novel therapeutic target 4 in multiple myeloma 5 6 Authors: Morihiko Sagawa1,4, Hiroto Ohguchi1, Takeshi Harada1, Mehmet K. Samur2, 7 Yu-Tzu Tai 1, Nikhil C. Munshi1,3, Masahiro Kizaki4, Teru Hideshima1 and Kenneth C. 8 Anderson1 9 Affiliations: 1Jerome Lipper Multiple Myeloma Center, Department of Medical 10 Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, 11 Massachusetts. 2Department of Biostatistics and Computational Biology, Dana-Farber 12 Cancer Institute and Harvard School of Public Health, Boston, Massachusetts. 3West 13 Roxbury Division, VA Boston Healthcare System, West Roxbury, Massachusetts. 14 4Department of Hematology, Saitama Medical Center, Saitama Medical University, 15 Kawagoe, Saitama, Japan. 16 17 Running title: Targeting RRM1 as a novel treatment for multiple myeloma 18 Key words: Multiple Myeloma, RRM1, DNA damage response, p53, Clofarabine 19 20 Financial Support: NIH grants; SPORE P50-100707 (KCA), R01-CA050947 (KCA), 21 and R01-CA178264 (TH and KCA). 22 1 Downloaded from clincancerres.aacrjournals.org on October 2, 2021. © 2017 American Association for Cancer Research. Author Manuscript Published OnlineFirst on April 25, 2017; DOI: 10.1158/1078-0432.CCR-17-0263 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. 1 Corresponding Author: Kenneth C. Anderson, M.D., Jerome Lipper Multiple 2 Myeloma Center, Department of Medical Oncology, Dana-Farber Cancer Institute, 3 Harvard Medical School, M557, 450 Brookline Avenue, Boston, Massachusetts 02215. 4 Telephone; 617-632-2144, Fax; 617-632-2140, E-mail: 5 [email protected], 6 Conflict of Interest: The authors declare no potential conflicts of interest. 7 8 Word count: 3875 (excluding references), Abstract word count: 250 9 Number of figures: 6, Supplementary figures: 4, Supplementary tables: 1 10 Number of reference: 41 11 12 Translational Relevance 13 Ribonucleotide reductase, an enzyme required for DNA synthesis and repair, is 14 overexpressed in many cancers and associated with poor prognosis. Here we 15 investigated the biologic significance of ribonucleotide reductase subunit M1 (RRM1) 16 in multiple myeloma (MM) cells. We demonstrate that RRM1 knockdown and an 17 RRM1 inhibitor clofarabine (CLO), alone and especially when combined with 18 melphalan, triggers significant MM cell growth inhibition both in vitro and in vivo in a 19 mouse human MM xenograft model. Importantly, activation of both DNA damage 20 response and p53 pathways mediate combination treatment-induced anti-MM activity. 21 Our findings provide the rationale for clinical investigation of RRM1 inhibitor in 22 combination with DNA damaging agents as a novel treatment strategy in MM. 2 Downloaded from clincancerres.aacrjournals.org on October 2, 2021. © 2017 American Association for Cancer Research. Author Manuscript Published OnlineFirst on April 25, 2017; DOI: 10.1158/1078-0432.CCR-17-0263 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. 1 Abstract 2 Purpose: To investigate the biologic and clinical significance of ribonucleotide 3 reductase (RR) in multiple myeloma (MM). 4 Experimental Design: We assessed the impact of RR expression on patient outcome in 5 MM. We then characterized the effect of genetic and pharmacological inhibition of 6 RRM1 on MM growth and survival using siRNA and clofarabine (CLO), respectively, 7 both in vitro and in vivo mouse xenograft model. 8 Results: Newly diagnosed MM patients with higher RRM1 expression have shortened 9 survival. Knockdown of RRM1 triggered significant growth inhibition and apoptosis in 10 MM cells, even in the context of the bone marrow microenvironment. Gene expression 11 profiling showed upregulation of DNA damage response genes and p53 regulated genes 12 after RRM1 knockdown. Immunoblot and QRT-PCR analysis confirmed that γ-H2A.X, 13 ATM, ATR, Chk1, Chk2, RAD51, 53BP1, BRCA1, and BRCA2 were 14 upregulated/activated. Moreover, immunoblots showed that p53, p21, Noxa, and Puma 15 were activated in p53 wild-type MM cells. Clofarabine (CLO), a purine nucleoside 16 analog that inhibits RRM1, induced growth arrest and apoptosis in p53 wild-type cell 17 lines. Although CLO did not induce cell death in p53 mutant cells, it did trigger 18 synergistic toxicity in combination with DNA damaging agent melphalan. Finally, we 19 demonstrated that tumor growth of RRM1-knockdown MM cells was significantly 20 reduced in a murine human MM cell xenograft model. 21 Conclusions: Our results therefore demonstrate that RRM1 is a novel therapeutic target 22 in MM in preclinical setting, and provide the basis for clinical evaluation of RRM1 3 Downloaded from clincancerres.aacrjournals.org on October 2, 2021. © 2017 American Association for Cancer Research. Author Manuscript Published OnlineFirst on April 25, 2017; DOI: 10.1158/1078-0432.CCR-17-0263 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. 1 inhibitor, alone or in combination with DNA damaging agents, to improve patient 2 outcome in MM. 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 4 Downloaded from clincancerres.aacrjournals.org on October 2, 2021. © 2017 American Association for Cancer Research. Author Manuscript Published OnlineFirst on April 25, 2017; DOI: 10.1158/1078-0432.CCR-17-0263 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. 1 Introduction 2 Multiple myeloma (MM) is a plasma cell disorder characterized by excess malignant 3 plasma cells in the bone marrow (BM), increased monoclonal gammaglobulin in blood 4 and/or urine, and end organ damage in kidney and bone [1]. Although proteasome 5 inhibitors (bortezomib, carfilzomib, ixazomib), immunomodulatory drugs (lenalidomide, 6 pomalidomide) and monoclonal antibodies (daratumumab and elotuzumab) [2, 3] have 7 achieved remarkable clinical responses and improved patient outcome, relapse of 8 disease is common, highlighting the need for novel treatment strategies [4, 5]. 9 Ribonucleotide reductase (RR) is an enzyme that catalyzes the conversion of 10 ribonucleotide diphosphate to deoxynucleotide diphosphate, which is further 11 phosphorylated into deoxynucleotide triphosphate. Deoxynucleotide triphosphate, is a 12 direct substrate of DNA polymerases, and therefore plays a central role in de novo DNA 13 synthesis during cell replication, DNA repair, and cell growth [6, 7]. The RR enzyme 14 primarily exists as a heterodimeric tetramer of large and catalytic subunit RRM1, with 15 small and regulatory subunit RRM2 [6]. RRM1 expression is ubiquitous, while RRM2 16 expression is cell cycle dependent [6]. 17 RR is expressed in different types of cancers, and has been associated with drug 18 resistance, cancer cell growth and metastasis [8]. However, other reports show that 19 RRM1 suppresses metastasis through induction of PTEN, that RRM1 expression 20 correlates with ERCC1, and that higher RRM1 expression in non-small cell lung 21 carcinoma is associated with better disease-free and overall survival [9, 10]. In 22 pancreatic cancer, there was no benefit of gemcitabine therapy after surgery in tumors 5 Downloaded from clincancerres.aacrjournals.org on October 2, 2021. © 2017 American Association for Cancer Research. Author Manuscript Published OnlineFirst on April 25, 2017; DOI: 10.1158/1078-0432.CCR-17-0263 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. 1 highly expressing RRM1 group, and higher RRM1 expression was associated with 2 shorter survival [11]. In MM, a genome-scale siRNAs lethality study in MM identified 3 RRM1 [12]; however, the biologic role of RR in MM pathogenesis hasn't yet been 4 further elucidated. 5 In this study, we characterized the biological significance of RR in MM 6 pathogenesis. We show that knockdown of RR, especially RRM1, leads to apoptotic cell 7 death in MM both in vitro and in vivo, even in the presence of BM microenvironment, 8 associated with upregulation of DNA damage response and p53 pathway. Non-specific 9 RRM1 inhibitor clofarabine (CLO) also triggers apoptotic MM cell death, upregulates 10 DNA damage response and p53 pathway, and triggers synergistic MM cytotoxicity 11 when combined with melphalan (MEL). Our data therefore provide the rationale for a 12 novel treatment strategy inhibiting RRM1 to improve patient outcome in MM. 13 14 15 Methods 16 Cell culture 17 Human MM cell lines NCI-H929, MM.1S, RPMI8226, and U266 were purchased from 18 American Type Culture Collection (ATCC, Manassas, VA, USA). KMS-11 cells were 19 obtained from Japanese Collection of Research Bioresources Cell Bank (Osaka, Japan). 20 Cell lines have been tested and authenticated by STR DNA fingerprinting analysis 21 (Molecular Diagnostic Laboratory, Dana-Farber Cancer Institute), and used within 3 22 months after thawing. MOLP-8 cells were recently obtained from Deutsche Sammlung 6 Downloaded from clincancerres.aacrjournals.org on October 2, 2021. © 2017 American Association for Cancer Research. Author Manuscript Published OnlineFirst on April 25, 2017; DOI: 10.1158/1078-0432.CCR-17-0263 Author manuscripts
Recommended publications
  • Exosomes Confer Chemoresistance to Pancreatic Cancer Cells By
    FULL PAPER British Journal of Cancer (2017) 116, 609–619 | doi: 10.1038/bjc.2017.18 Keywords: chemoresistance; exosomes; pancreatic cancer; ROS; microRNA Exosomes confer chemoresistance to pancreatic cancer cells by promoting ROS detoxification and miR-155-mediated suppression of key gemcitabine-metabolising enzyme, DCK Girijesh Kumar Patel1, Mohammad Aslam Khan1, Arun Bhardwaj1, Sanjeev K Srivastava1, Haseeb Zubair1, Mary C Patton1, Seema Singh1,2, Moh’d Khushman3 and Ajay P Singh*,1,2 1Department of Oncologic Sciences, Mitchell Cancer Institute, University of South Alabama, Mobile, AL, USA; 2Department of Biochemistry and Molecular Biology, College of Medicine, University of South Alabama, Mobile, AL, USA and 3Department of Interdisciplinary Clinical Oncology, Mitchell Cancer Institute, University of South Alabama, Mobile, AL, USA Background: Chemoresistance is a significant clinical problem in pancreatic cancer (PC) and underlying molecular mechanisms still remain to be completely understood. Here we report a novel exosome-mediated mechanism of drug-induced acquired chemoresistance in PC cells. Methods: Differential ultracentrifugation was performed to isolate extracellular vesicles (EVs) based on their size from vehicle- or gemcitabine-treated PC cells. Extracellular vesicles size and subtypes were determined by dynamic light scattering and marker profiling, respectively. Gene expression was examined by qRT-PCR and/or immunoblot analyses, and direct targeting of DCK by miR-155 was confirmed by dual-luciferase 30-UTR reporter assay. Flow cytometry was performed to examine the apoptosis indices and reactive oxygen species (ROS) levels in PC cells using specific dyes. Cell viability was determined using the WST-1 assay. Results: Conditioned media (CM) from gemcitabine-treated PC cells (Gem-CM) provided significant chemoprotection to subsequent gemcitabine toxicity and most of the chemoresistance conferred by Gem-CM resulted from its EVs fraction.
    [Show full text]
  • Knockdown of RRM1 with Adenoviral Shrna Vectors to Inhibit Tumor Cell Viability and Increase Chemotherapeutic Sensitivity to Gemcitabine in Bladder Cancer Cells
    International Journal of Molecular Sciences Article Knockdown of RRM1 with Adenoviral shRNA Vectors to Inhibit Tumor Cell Viability and Increase Chemotherapeutic Sensitivity to Gemcitabine in Bladder Cancer Cells Xia Zhang 1, Rikiya Taoka 1,*, Dage Liu 2, Yuki Matsuoka 1, Yoichiro Tohi 1 , Yoshiyuki Kakehi 1 and Mikio Sugimoto 1 1 Department of Urology, Faculty of Medicine, Kagawa University, 1750-1 Ikenobe, Miki-cho, Kita-gun, Kagawa 761-0793, Japan; [email protected] (X.Z.); [email protected] (Y.M.); [email protected] (Y.T.); [email protected] (Y.K.); [email protected] (M.S.) 2 Department of General Thoracic Surgery, Faculty of Medicine, Kagawa University, 1750-1 Ikenobe, Miki-cho, Kita-gun, Kagawa 761-0793, Japan; [email protected] * Correspondence: [email protected]; Tel.: +81-87-891-2202 Abstract: RRM1—an important DNA replication/repair enzyme—is the primary molecular gem- citabine (GEM) target. High RRM1-expression associates with gemcitabine-resistance in various cancers and RRM1 inhibition may provide novel cancer treatment approaches. Our study eluci- dates how RRM1 inhibition affects cancer cell proliferation and influences gemcitabine-resistant bladder cancer cells. Of nine bladder cancer cell lines investigated, two RRM1 highly expressed cells, 253J and RT112, were selected for further experimentation. An RRM1-targeting shRNA was Citation: Zhang, X.; Taoka, R.; Liu, cloned into adenoviral vector, Ad-shRRM1. Gene and protein expression were investigated using D.; Matsuoka, Y.; Tohi, Y.; Kakehi, Y.; real-time PCR and western blotting.
    [Show full text]
  • TRACE: Tennessee Research and Creative Exchange
    University of Tennessee, Knoxville TRACE: Tennessee Research and Creative Exchange Doctoral Dissertations Graduate School 8-2009 Structure-Function Studies of the Large Subunit of Ribonucleotide Reductase from Homo sapiens and Saccharomyces cerevisiae James Wesley Fairman University of Tennessee - Knoxville Follow this and additional works at: https://trace.tennessee.edu/utk_graddiss Part of the Biochemistry, Biophysics, and Structural Biology Commons Recommended Citation Fairman, James Wesley, "Structure-Function Studies of the Large Subunit of Ribonucleotide Reductase from Homo sapiens and Saccharomyces cerevisiae. " PhD diss., University of Tennessee, 2009. https://trace.tennessee.edu/utk_graddiss/49 This Dissertation is brought to you for free and open access by the Graduate School at TRACE: Tennessee Research and Creative Exchange. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of TRACE: Tennessee Research and Creative Exchange. For more information, please contact [email protected]. To the Graduate Council: I am submitting herewith a dissertation written by James Wesley Fairman entitled "Structure- Function Studies of the Large Subunit of Ribonucleotide Reductase from Homo sapiens and Saccharomyces cerevisiae." I have examined the final electronic copy of this dissertation for form and content and recommend that it be accepted in partial fulfillment of the equirr ements for the degree of Doctor of Philosophy, with a major in Biochemistry and Cellular and Molecular Biology. Chris G. Dealwis,
    [Show full text]
  • Mitigation of ALS Pathology by Neuron-Specific Inhibition of Nuclear Factor Kappa B Signaling
    The Journal of Neuroscience, June 24, 2020 • 40(26):5137–5154 • 5137 Neurobiology of Disease Mitigation of ALS Pathology by Neuron-Specific Inhibition of Nuclear Factor Kappa B Signaling Kallol Dutta,1 Sai Sampath Thammisetty,1 Hejer Boutej,1 Christine Bareil,1 and Jean-Pierre Julien1,2 1CERVO Brain Research Centre, Québec City, Québec G1J 2G3, Canada, and 2Department of Psychiatry and Neuroscience, Université Laval, Québec City, Québec G1V 0A6, Canada To investigate the role of neuronal NF-jB activity in pathogenesis of amyotrophic lateral sclerosis (ALS), we generated trans- genic mice with neuron-specific expression of a super-repressor form of the NF-jB inhibitor (IjBa-SR), which were then crossed with mice of both sexes, expressing ALS-linked gene mutants for TAR DNA-binding protein (TDP-43) and superoxide dismutase 1 (SOD1). Remarkably, neuronal expression of IjBa-SR transgene in mice expressing TDP-43A315T or TDP-43G348C mice led to a decrease in cytoplasmic to nuclear ratio of human TDP-43. The mitigation of TDP-43 neuropathology by IjBa-SR, which is likely due to an induction of autophagy, was associated with amelioration of cognitive and motor deficits as well as reduc- tion of motor neuron loss and gliosis. Neuronal suppression of NF-jB activity in SOD1G93A mice also resulted in neuroprotection with reduction of misfolded SOD1 levels and significant extension of life span. The results suggest that neuronal NF-jB signaling constitutes a novel therapeutic target for ALS disease and related disorders with TDP-43 proteinopathy. Key words: amyotrophic lateral sclerosis; frontotemporal dementia; IjB suppressor; NF-jB; superoxide dismutase; TDP-43 Significance Statement This study reports that neuron-specific expression of IkB super-repressor mitigated behavioral and pathologic changes in transgenic mouse models of amyotrophic lateral sclerosis expressing mutant forms of either Tar DNA-binding protein 43 or superoxide dismutase.
    [Show full text]
  • ERK5 Binding Partners
    Supplementary Table 1: ERK5 binding partners id Protein IDs Protein namesGene namesRazor + uniqueSequence peptides coverageLFQ intensity [%]LFQ FL_m_01 intensityLFQ FL_m_02 intensityLFQ FL_m_03 intensityLFQ FL_p_01 intensityLFQ FL_p_02 intensityLFQ FL_p_03 intensityLFQ MU_p_01 intensityLFQ MU_p_02 intensitynormalized MU_p_03 normalizedLog2 IFL_m_01 normalizedLog2 IFL_m_02 normalizedLog2 IFL_m_03 normalizedLog2 IFL_p_01 normalizedLog2 IFL_p_02 normalizedLog2 IFL_p_03 normalizedLog2 IMU_p_01 normalizedLog2 IMU_p_02 medianLog2 IMU_p_03 - mediam FL median Mutst dev - st dev fl st dev mut cluster1 cluster2 cluster3 950 H7BXZ6 MitochondrialRHOT1 Rho GTPase 2 6.5 1.08E+08 26.77 26.77 + 405 B7WPL0 Synembryn-BRIC8B 2 6.1 9.55E+07 26.75 26.75 + 780 F6RFD5 Destrin DSTN 5 37.8 3.94E+07 25.49 25.49 + 360 B1AN48 Small proline-richSPRR3 protein 3 2 10.1 3.65E+07 25.24 25.24 + 1376 P02808 Statherin STATH 2 54.8 3.05E+07 25.12 25.12 + 196 A0A0A0MTI6Elongation ofELOVL5 very long chain fatty2 acids protein8.4 1.92E+07 1.52E+07 24.35 24.09 24.22 0.188066 + 2157 Q13163-4 Dual specificityMAP2K5 mitogen-activated6 protein18.7 kinase kinase 5 9.04E+06 2.09E+07 1.04E+07 8.78E+06 1.28E+07 1.06E+07 23.11 24.49 23.53 23.01 23.4 22.9 23.53 23.01 0.704014 0.263334 + 2702 Q96AB3-3 IsochorismataseISOC2 domain-containing2 protein28.1 2, mitochondrial 8.02E+06 23.1 23.1 + 64 A0A087WW54DEP domain-containingDEPDC7 protein 75 9.6 4.88E+06 7.56E+06 1.20E+07 3.13E+06 22.21 23.03 23.69 21.54 23.03 21.54 0.742829 + 1673 P30837 Aldehyde dehydrogenaseALDH1B1 X, mitochondrial5 13.7
    [Show full text]
  • Apoptosis Signal-Regulating Kinase 1 Promotes Ochratoxin A-Induced
    OPEN Apoptosis Signal-regulating Kinase 1 SUBJECT AREAS: promotes Ochratoxin A-induced renal CELL BIOLOGY RISK FACTORS cytotoxicity Rui Liang1, Xiao Li Shen1,2, Boyang Zhang1, Yuzhe Li1, Wentao Xu1, Changhui Zhao3, YunBo Luo1 Received & Kunlun Huang1 10 November 2014 Accepted 1Laboratory of food safety and molecular biology, College of Food Science and Nutritional Engineering, China Agricultural 5 January 2015 University, Beijing 100083, P.R. China, 2School of Public Health, Zunyi Medical University, Zunyi, Guizhou 563003, P.R. China, 3Department of Nutrition and Food Science, University of Maryland, College Park, MD 20742, USA. Published 28 January 2015 Oxidative stress and apoptosis are involved in Ochratoxin A (OTA)-induced renal cytotoxicity. Apoptosis signal-regulating kinase 1 (ASK1) is a Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK, Correspondence and MAP3K) family member that plays an important role in oxidative stress-induced cell apoptosis. In this study, we performed RNA interference of ASK1 in HEK293 cells and employed an iTRAQ-based requests for materials quantitative proteomics approach to globally investigate the regulatory mechanism of ASK1 in should be addressed to OTA-induced renal cytotoxicity. Our results showed that ASK1 knockdown alleviated OTA-induced ROS W.X. (xuwentao@cau. generation and Dym loss and thus desensitized the cells to OTA-induced apoptosis. We identified 33 and 24 edu.cn) differentially expressed proteins upon OTA treatment in scrambled and ASK1 knockdown cells, respectively. Pathway classification and analysis revealed that ASK1 participated in OTA-induced inhibition of mRNA splicing, nucleotide metabolism, the cell cycle, DNA repair, and the activation of lipid metabolism. We concluded that ASK1 plays an essential role in promoting OTA-induced renal cytotoxicity.
    [Show full text]
  • Molecular Analysis and Characterisation of Plasmid Ptf5
    Molecular analysis and characterisation of plasmid pTFS from Thiobacillus ferrooxidans ATCC33020 Clifford Noel Dominy In fulfilment of the requirements for the degree of UniversityDoctor of Philosophy of in theCape Faculty ofTown Science, University of Cape Town. CAPETOWN FEBRUARY 1997 -· ·- --·~----··~~, { . ')_ '. The copyright of this thesis vests in the author. No quotation from it or information derived from it is to be published without full acknowledgement of the source. The thesis is to be used for private study or non- commercial research purposes only. Published by the University of Cape Town (UCT) in terms of the non-exclusive license granted to UCT by the author. University of Cape Town ii To my wife Patricia, for her patience, love and understanding over the years. and to my parents, Ashton and Denise Dominy for their encouragement and support. lll CERTIFICATION OF SUPERVISOR In terms of paragraph 9 of "General regulations for the degree of Ph.D." I as supervisor of the candidate Clifford Noel Dominy, certify that I approve of the incorporation in this thesis of material that has already been published or submitted for publication. Professor D.E. Rawlings Department of Microbiology University of Cape Town IV Acknowledgements I am greatly indebted to my supervisor, Professor Doug Rawlings for his enthusiastic guidance and support over the duration of this project. His confidence and optimism have served as a source of inspiration over the years. Many thanks go to members of the "Thiobacillus Research Unit", both past and present, who freely gave advice (and reagents) in times of crises. Specifically I would like to thank Dave Berger for his initial supervision of the project and Shelly Deane for invaluable help with the pulsed field gel electrophoresis.
    [Show full text]
  • Nucleotide Biosynthesis Links Glutathione Metabolism to Ferroptosis Sensitivity
    bioRxiv preprint doi: https://doi.org/10.1101/2021.07.14.452394; this version posted July 15, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Nucleotide Biosynthesis Links Glutathione Metabolism to Ferroptosis Sensitivity Amy Tarangelo1,3, Joon Tae Kim2, Jonathan Z. Long2, Scott J. Dixon1,4 1Department of Biology, Stanford University, 327 Campus Drive, Stanford, CA 94305, USA 2Department of Pathology and Stanford ChEM-H, Stanford University School of Medicine 291 Campus Drive, Stanford, CA 94305, USA 3Current address: Children’s Medical Center Research Institute, UT Southwestern, 6000 Harry Hines Blvd, Dallas, TX 75235 4Contact: [email protected] Key words: Cell death, iron, p53, p21 Running title: Nucleotide metabolism and ferroptosis bioRxiv preprint doi: https://doi.org/10.1101/2021.07.14.452394; this version posted July 15, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract Nucleotide synthesis is a metabolically demanding process essential for cell division. Several anti-cancer drugs that inhibit nucleotide metabolism induce apoptosis. How inhibition of nucleotide metabolism impacts non-apoptotic cell death is less clear. Here, we report that inhibition of nucleotide metabolism by the p53 pathway is sufficient to suppress the non-apoptotic cell death process of ferroptosis.
    [Show full text]
  • Imp2 Controls Oxidative Phosphorylation and Is Crucial for Preserving Glioblastoma Cancer Stem Cells
    Downloaded from genesdev.cshlp.org on October 1, 2021 - Published by Cold Spring Harbor Laboratory Press Imp2 controls oxidative phosphorylation and is crucial for preserving glioblastoma cancer stem cells Michalina Janiszewska,1,8 Mario L. Suva`,2,8 Nicolo Riggi,2 Riekelt H. Houtkooper,3,4 Johan Auwerx,3 Virginie Cle´ment-Schatlo,5 Ivan Radovanovic,5 Esther Rheinbay,2,6 Paolo Provero,7 and Ivan Stamenkovic1,9 1Experimental Pathology, Department of Laboratories, CHUV, University of Lausanne, Lausanne CH-1011, Switzerland; 2James Homer Wright Pathology Laboratories, Department of Pathology, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts 02114, USA; 3Laboratory for Integrative and Systems Physiology, Nestle Chair in Energy Metabolism (NCEM), Ecole Polytechnique Fe´de´rale de Lausanne, Lausanne CH-1015, Switzerland; 4Laboratory Genetic Metabolic Diseases, University of Amsterdam, Academic Medical Center, Amsterdam 1105 AZ, Netherlands; 5Department of Clinical Neurosciences, University Hospital of Geneva, Geneva CH-1211, Switzerland; 6Bioinformatics Program, Boston University, Boston, Massachusetts 02215, USA; 7Department of Genetics, Biology, and Biochemistry, University of Torino, Torino 10126 Italy Growth of numerous cancer types is believed to be driven by a subpopulation of poorly differentiated cells, often referred to as cancer stem cells (CSCs), that have the capacity for self-renewal, tumor initiation, and generation of nontumorigenic progeny. Despite their potentially key role in tumor establishment and maintenance, the energy requirements of these cells and the mechanisms that regulate their energy production are unknown. Here, we show that the oncofetal insulin-like growth factor 2 mRNA-binding protein 2 (IMP2, IGF2BP2) regulates oxidative phosphorylation (OXPHOS) in primary glioblastoma (GBM) sphere cultures (gliomaspheres), an established in vitro model for CSC expansion.
    [Show full text]
  • Protein Interactions Allow Functional Regulation of Homocysteine Metabolism
    HIGHLIGHTS - Protein interactions allow functional regulation of homocysteine metabolism - Homocysteine metabolism establishes pathway interplays through protein interactions - Intermolecular interactions within homocysteine metabolism may support substrate channeling - Homocysteine metabolism interaction networks are altered in oncogenesis - Proteins of homocysteine metabolism interact with oncogenes for gene regulation PROTEIN-PROTEIN INTERACTIONS INVOLVING ENZYMES OF THE MAMMALIAN METHIONINE AND HOMOCYSTEINE METABOLISM Francisco Portillo1,2,3,4, Jesús Vázquez5,6, María A. Pajares2,7* 1Instituto de Investigaciones Biomédicas Alberto Sols (CSIC-UAM), Arturo Duperier 4, 28029 Madrid, Spain 2Instituto de Investigación Sanitaria La Paz (IdiPAZ), Paseo de la Castellana 261, 28046 Madrid, Spain 3Departamento de Bioquímica, Facultad de Medicina, Universidad Autónoma de Madrid, Arzobispo Morcillo 4, 28029 Madrid, Spain 4Centro de Investigación Biomédica en Red de Cáncer (CIBERONC), Instituto de Salud Carlos III, Madrid, Spain. 5Laboratory of Cardiovascular Proteomics, Centro Nacional de Investigaciones Cardiovasculares (CNIC), Melchor Fernández de Almagro 3, 28029 Madrid, Spain. 6CIBER de Enfermedades Cardiovasculares (CIBERCV), Madrid, Spain. 7Departamento de Biología Estructural y Química, Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain. *Corresponding author: Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain. (Phone: 34-918373112; FAX: 34-915360432; email: [email protected]). ABBREVIATIONS: AdoMet, S-adenosylmethionine; AdoHcy, S- adenosylhomocysteine; AHCY, S-adenosylhomocysteine hydrolase; AP, affinity 1 purification; BHMT and BHMT2, betaine homocysteine S-methyltransferases 1 and 2; CBS, cystathionine b-synthase; CTH, cystathionine g-lyase; GSH and GSSG, glutathione reduced and oxidized forms; Hcy, homocysteine; MAT, methionine adenosyltransferase; MS, mass spectrometry; MTR, methionine synthase; NNMT, nicotinamide N- methyltransferase; PDRG1, p53 and DNA damage-regulated gene 1.
    [Show full text]
  • The Author Has Granted A
    National Library Bibliothèque nationale of Canada du Canada Acquisitions and Acquisitions et Bibliographic Services senrices bibliographiques 395 Wellington Street 395, rue Wellington Ottawa ON KIA ON4 OttawaON KIAON4 Canada Canada Your hie Votre mHrence Our tî& Notre relérence The author has granted a non- L'auteur a accordé une licence non exclusive licence allowing the exclusive permettant a la National Library of Canada to Bibliothèque nationale du Canada de reproduce, loan, distribute or sel1 reproduire, prêter, distribuer ou copies of this thesis in microform, vendre des copies de cette thèse sous paper or electronic formats. la forme de microfiche/filrn, de reproduction sur papier ou sur format électronique. The author retains ownership of the L'auteur conserve la propriété du copyright in this thesis. Neither the droit d'auteur qui protège cette thèse. thesis nor substantial extracts fiom it Ni la thèse ni des extraits substantiels may be printed or otherwise de celle-ci ne doivent être imprimés reproduced without the author's ou autrement reproduits sans son permission. autorisation. CHARACTERIZATION OF A GENE ENCODING AN RNA-BINDING PROTEIN (rbpA)IN THE CYANOBACTERIUM SMVECHOCOCCUS SP. PCC 7942 Thomas James Belbin A thesis submitted to the School of Graduate Studies in partial fulfilment of the requirements for the degree of Doctor of Philosophy Department of Biochemistry Mernorial University of New foundland May 1999 St. John's Newfoundland ABSTRACT Many species of cyanobacteria possess genes whose products are highly similar to the RNP family of RNA-binding proteins found in eukaryotes. This work describes the characterization of rbpA, one of two RNA-binding protein (rbp) genes now known to exist in the unicellular cvanobacterium S~~iecliococciissp.
    [Show full text]
  • Yeast to Study Human Purine Metabolism Diseases Bertrand Daignan-Fornier, Benoit Pinson
    Yeast to Study Human Purine Metabolism Diseases Bertrand Daignan-Fornier, Benoit Pinson To cite this version: Bertrand Daignan-Fornier, Benoit Pinson. Yeast to Study Human Purine Metabolism Diseases. Cells, MDPI, 2019, 8 (1), pp.67. 10.3390/cells8010067. hal-02346566 HAL Id: hal-02346566 https://hal.archives-ouvertes.fr/hal-02346566 Submitted on 5 Nov 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. cells Review Yeast to Study Human Purine Metabolism Diseases Bertrand Daignan-Fornier 1,2,* and Benoît Pinson 1,2 1 Université de Bordeaux IBGC UMR 5095 1, rue Camille Saint-Saëns, F-33077 Bordeaux, France; [email protected] 2 Centre National de la Recherche Scientifique IBGC UMR 5095 1, rue Camille Saint-Saëns, F-33077 Bordeaux, France * Correspondence: [email protected]; Tel.: +33-556-999-001; Fax: +33-556-999-059 Received: 8 January 2019; Accepted: 15 January 2019; Published: 17 January 2019 Abstract: Purine nucleotides are involved in a multitude of cellular processes, and the dysfunction of purine metabolism has drastic physiological and pathological consequences. Accordingly, several genetic disorders associated with defective purine metabolism have been reported.
    [Show full text]