Taxonomy of Neovossia Horrida (Ustilaginales)
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<I>Tilletia Indica</I>
ISPM 27 27 ANNEX 4 ENG DP 4: Tilletia indica Mitra INTERNATIONAL STANDARD FOR PHYTOSANITARY MEASURES PHYTOSANITARY FOR STANDARD INTERNATIONAL DIAGNOSTIC PROTOCOLS Produced by the Secretariat of the International Plant Protection Convention (IPPC) This page is intentionally left blank This diagnostic protocol was adopted by the Standards Committee on behalf of the Commission on Phytosanitary Measures in January 2014. The annex is a prescriptive part of ISPM 27. ISPM 27 Diagnostic protocols for regulated pests DP 4: Tilletia indica Mitra Adopted 2014; published 2016 CONTENTS 1. Pest Information ............................................................................................................................... 2 2. Taxonomic Information .................................................................................................................... 2 3. Detection ........................................................................................................................................... 2 3.1 Examination of seeds/grain ............................................................................................... 3 3.2 Extraction of teliospores from seeds/grain, size-selective sieve wash test ....................... 3 4. Identification ..................................................................................................................................... 4 4.1 Morphology of teliospores ................................................................................................ 4 4.1.1 Morphological -
Use of Whole Genome Sequence Data to Characterize Mating and Rna
USE OF WHOLE GENOME SEQUENCE DATA TO CHARACTERIZE MATING AND RNA SILENCING GENES IN TILLETIA SPECIES By SEAN WESLEY MCCOTTER A thesis submitted in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE IN PLANT PATHOLOGY WASHINGTON STATE UNIVERSITY Department of Plant Pathology DECEMBER 2014 © Copyright by SEAN WESLEY MCCOTTER, 2014 All Rights Reserved © Copyright by SEAN WESLEY MCCOTTER, 2014 All Rights Reserved To the Faculty of Washington State University: The members of the Committee appointed to examine the thesis of SEAN WESLEY MCCOTTER find it satisfactory and recommend that it be accepted. Lori M. Carris, Ph.D., Chair Dorrie Main, Ph.D. Patricia Okubara, Ph.D. Lisa A. Castlebury, Ph. D. ii ACKNOWLEDGMENTS The research presented in this thesis could not have been carried out without the expertise and cooperation of others in the scientific community. Significant contributions were made by colleagues here at Washington State University, at the United States Department of Agriculture and at Agriculture and Agri-Food Canada. I would like to start by thanking my committee members Dr. Lori Carris, Dr. Lisa Castlebury, Dr. Pat Okubara and Dr. Dorrie Main, who provided guidance on procedure, feedback on my research as well as contacts and laboratory resources. Dr. André Lévesque of AAFC initially alerted me to the prospect of collaboration with other AAFC Tilletia researchers and placed me in contact with Dr. Sarah Hambleton, whose lab sequenced four out of five strains of Tilletia used in this study (CSSP CRTI 09-462RD). Dr. Prasad Kesanakurti and Jeff Cullis coordinated my access to AAFC’s genome and transcriptome data for these species. -
Diseases Affecting Rice in Louisiana Harry Rascoe Fulton
Louisiana State University LSU Digital Commons LSU Agricultural Experiment Station Reports LSU AgCenter 1908 Diseases affecting rice in Louisiana Harry Rascoe Fulton Follow this and additional works at: http://digitalcommons.lsu.edu/agexp Recommended Citation Fulton, Harry Rascoe, "Diseases affecting rice in Louisiana" (1908). LSU Agricultural Experiment Station Reports. 574. http://digitalcommons.lsu.edu/agexp/574 This Article is brought to you for free and open access by the LSU AgCenter at LSU Digital Commons. It has been accepted for inclusion in LSU Agricultural Experiment Station Reports by an authorized administrator of LSU Digital Commons. For more information, please contact [email protected]. Louisiana Buiietin No, 105. April, 1908. Agricultural Experiment Station OF THE Louisiana State University and A. & M. College, BATON ROUGE. Diseases Affecting: Rice IN LOUISIANA. H. R. FULTON, M. S. BATON ROUGE: The Daily State Publishing Company^ State Peinthes. 1908. Louisiana State University and A. 6i n College LOUISIANA STATE BOARD OF AGRICULTURE AND IMMIGRATION EX-OFFICIO. Governor NEWTON C. BLANCHARD, President. S. M. ROBERTSON, Vice President of Board of Supervisors. CHAS. SCHULER, Commissioner of Agriculture and Immigration. THOMAS D. BOYD, President State University. W. It. DODSON, Director Experiment Stations. MEMBERS. JOHN DYMOND, Belair, La. LUCIEN SONIAT, Camp Parapet, La. La. J. SHAW JONES, Monroe, La. C. A. TIEBOUT, Roseland, FRED SEIP, Alexandria, La. C. A. CELESTIN, Houma, La. H. C. STRINGFELLOW, Howard, La. STATION STAFF. W. R. DODSON^ A.B., B.S., Director, Baton Rouge. R. E. BLOUIN, M.S., Assistant Director, Audubon Park, New Orleans. J G. LEE, B.S., Assistant Director, Calhoun. S. E. -
Internal Transcribed Spacer Sequence-Based Phylogeny and Polymerase Chain Reaction-Restriction Fragment Length Polymorphism Differentiation of Tilletia Walkeri and T
Mycology Internal Transcribed Spacer Sequence-Based Phylogeny and Polymerase Chain Reaction-Restriction Fragment Length Polymorphism Differentiation of Tilletia walkeri and T. indica Laurene Levy, Lisa A. Castlebury, Lori M. Carris, Robert J. Meyer, and Guillermo Pimentel First and fourth authors: USDA-APHIS PPQ National Plant Germplasm Quarantine Center, Beltsville, MD 20705; second author: USDA- ARS Systematic Botany and Mycology Laboratory, Beltsville, MD 20705; and third and fifth authors: Department of Plant Pathology, Washington State University, Pullman 99164. Accepted for publication 1 June 2001. ABSTRACT Levy, L., Castlebury, L. A., Carris, L. M., Meyer, R. J., and Pimentel, bunt fungus, is described. The internal transcribed spacer (ITS) region of G. 2001. Internal transcribed spacer sequence-based phylogeny and the ribosomal DNA repeat unit was amplified and sequenced for isolates polymerase chain reaction-restriction fragment length polymorphism of T. indica, T. walkeri, T. horrida, and a number of other taxa in the differentiation of Tilletia walkeri and T. indica. Phytopathology 91:935- genus Tilletia. A unique restriction digest site in the ITS1 region of T. 940. walkeri was identified that distinguishes it from the other taxa in the genus. Phylogenetic analysis of the taxa based on ITS sequence data re- A polymerase chain reaction-restriction fragment length polymorphism vealed a close relationship between T. indica and T. walkeri, but more assay to distinguish Tilleita walkeri, a rye grass bunt fungus that occurs distant relationships between these two species and other morphologi- in the southeastern United States and Oregon, from T. indica, the Karnal cally similar taxa. Tilletia indica Mitra, the causal agent of Karnal bunt of wheat, PCR test was developed (21). -
Nonsystemic Bunt Fungi—Tilletia Indica and T. Horrida: a Review of History, Systematics, and Biology∗
ANRV283-PY44-05 ARI 7 February 2006 20:39 V I E E W R S I E N C N A D V A Nonsystemic Bunt Fungi—Tilletia indica and T. horrida: A Review of History, Systematics, and Biology∗ Lori M. Carris,1 Lisa A. Castlebury,2 and Blair J. Goates3 1Department of Plant Pathology, Washington State University, Pullman, Washington 99164-6430; email: [email protected] 2USDA ARS Systematic Botany and Mycology Laboratory, Beltsville, Maryland 20705-2350; email: [email protected] 3USDA ARS National Small Grains Germplasm Research Facility, Aberdeen, Idaho 82310; email: [email protected] Annu. Rev. Phytopathol. Key Words 2006. 44:5.1–5.21 Karnal bunt, Neovossia, rice kernel smut, Tilletia walkeri, Tilletiales The Annual Review of Phytopathology is online at phyto.annualreviews.org Abstract doi: 10.1146/ The genus Tilletia is a group of smut fungi that infects grasses either annurev.phyto.44.070505.143402 systemically or locally. Basic differences exist between the systemi- Copyright c 2006 by cally infecting species, such as the common and dwarf bunt fungi, and Annual Reviews. All rights locally infecting species. Tilletia indica, which causes Karnal bunt of reserved wheat, and Tilletia horrida, which causes rice kernel smut, are two ex- 0066-4286/06/0908- amples of locally infecting species on economically important crops. 0001-$20.00 However, even species on noncultivated hosts can become important ∗ The U.S. Government when occurring as contaminants in export grain and seed shipments. has the right to retain a nonexclusive, royalty-free In this review, we focus on T. indica and the morphologically similar license in and to any but distantly related T. -
Lista De Plagas Presentes En Nicaragua 2019
INSTITUTO DE PROTECCIÓN Y SANIDAD AGROPECUARIA DIRECCIÓN SANIDAD VEGETAL Y SEMILLAS LISTA DE PLAGAS REPORTADAS EN NICARAGUA Versión: 05 El presente trabajo constituye una recopilación de información sobre plagas reportadas en Nicaragua. En el se listan plagas de tipo ácaros, insectos, malezas, nematodos, hongos, bacterias y virus, abarcando su taxonomía, sinonimia y cultivos que afecta. Para la realización de este listado se toman en cuenta resultados de diagnósticos fitosanitarios oficiales, a través de la vigilancia fitosanitaria, muestreo, revisión de literatura y consultas en bases de datos. El IPSA (Instituto de Protección y Sanidad Agropecuaria), pone a disposición la versión V del listado de plagas reportadas en Nicaragua, en cumplimiento a lo establecido en el Capítulo II, numerales 6 y 7 del Artículo 10 de la Ley 291 "Ley Básica de Salud Animal y Sanidad Vegetal y su reglamento; así como lo estipulado en el Nuevo Téxto Revisado de la Convención Internacional de Protección Fitosanitaria (CIPF) en el Artículo VIII, numeral 1a. NOMBRE ACTUAL SINONIMOS CULTIVOS ACAROS Brevipalpus californicus (Banks, 1904) Brevipalpus australis (Tucker) Cítricos, Palma Africana Brevipalpus obovatus Donnadieu Brevipalpus inornatus (Banks) Chile, Chiltoma, Cocotero Tenuipalpus inornatus Banks Tenuipalpus obovatus (Donnadieu) Brevipalpus phoenicis ( Geijskes, 1936) Tenuipalpus phoenicis Geijskes, 1939: 23 Cacao, Cítricos, Papaya Dolichotetranychus floridanus (Banks) Algodón, Papaya, Achiote, Aguacate, Mango, Maíz, Yuca, Piña Eotetranychus lewisi (McGregor) -
DP 4: Tilletia Indica Mitra INTERNATIONAL STANDARD for PHYTOSANITARY MEASURES PHYTOSANITARY for STANDARD INTERNATIONAL DIAGNOSTIC PROTOCOLS
ISPM 27 27 ANNEX 4 ENG DP 4: Tilletia indica Mitra INTERNATIONAL STANDARD FOR PHYTOSANITARY MEASURES PHYTOSANITARY FOR STANDARD INTERNATIONAL DIAGNOSTIC PROTOCOLS Produced by the Secretariat of the International Plant Protection Convention (IPPC) This page is intentionally left blank This diagnostic protocol was adopted by the Standards Committee on behalf of the Commission on Phytosanitary Measures in January 2014. The annex is a prescriptive part of ISPM 27. ISPM 27 Diagnostic protocols for regulated pests DP 4: Tilletia indica Mitra Adopted 2014; published 2016 CONTENTS 1. Pest Information ............................................................................................................................... 2 2. Taxonomic Information .................................................................................................................... 2 3. Detection ........................................................................................................................................... 2 3.1 Examination of seeds/grain ............................................................................................... 3 3.2 Extraction of teliospores from seeds/grain, size-selective sieve wash test ....................... 3 4. Identification ..................................................................................................................................... 4 4.1 Morphology of teliospores ................................................................................................ 4 4.1.1 Morphological -
Diagnostic Protocol for Tilletia Indica, the Cause of Karnal Bunt
Diagnostic protocol for Tilletia indica, the cause of karnal bunt The International Diagnostic Protocol for Tilletia indica (ISPM-27 DP04) was released March 2014 https://www.ippc.int/en/publications/2457/ PEST STATUS Not present in Australia PROTOCOL NUMBER NDP 19 VERSION NUMBER V1.3 PROTOCOL STATUS Endorsed ISSUE DATE 2012 REVIEW DATE 2017 ISSUED BY SPHDS Prepared for the Subcommittee on Plant Health Diagnostic Standards (SPHDS) This version of the National Diagnostic Protocol (NDP) for karnal bunt is current as at the date contained in the version control box on the front of this document. NDPs are updated every 5 years or before this time if required (i.e. when new techniques become available). The most current version of this document is available from the SPHDS website: http://plantbiosecuritydiagnostics.net.au/resource-hub/priority-pest-diagnostic-resources/ Where an IPPC diagnostic protocol exists it should be used in preference to the NDP. NDPs may contain additional information to aid diagnosis. IPPC protocols are available on the IPPC website: https://www.ippc.int/core-activities/standards-setting/ispms Contents 1 Introduction .................................................................................................................... 1 1.1 General introduction ................................................................................................ 1 1.2 Host range .............................................................................................................. 2 1.3 Symptoms .............................................................................................................. -
Dirección General De Sanidad Vegetal Centro Nacional De Referencia Fitosanitaria
DIRECCIÓN GENERAL DE SANIDAD VEGETAL CENTRO NACIONAL DE REFERENCIA FITOSANITARIA Área de Diagnóstico Fitosanitario Laboratorio de Micología Protocolo de Diagnóstico: Tilletia indica Mitra (Carbón parcial del trigo) Tecámac, Estado de México, Julio 2018 Versión 1.0 I. ÍNDICE 1. OBJETIVO Y ALCANCE DEL PROTOCOLO ........................................................................................... 1 2. INTRODUCCIÓN ............................................................................................................................................ 1 2.1. INFORMACIÓN SOBRE LA PLAGA .................................................................................................................... 1 2.2. INFORMACIÓN TAXONÓMICA ......................................................................................................................... 2 2.3. FLUJO DE TRABAJO ........................................................................................................................................ 3 3. DETECCIÓN E IDENTIFICACIÓN ............................................................................................................. 4 3.1. OBSERVACIÓN DIRECTA ................................................................................................................................. 4 3.1.1. Interpretación de resultados ................................................................................................................. 4 3.2. HIDRÓLISIS DEL ENDOSPERMO ...................................................................................................................... -
Epitypification of Tilletia Ehrhartae, a Smut Fungus with Potential For
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Crossref Eur J Plant Pathol (2015) 143:151–158 DOI 10.1007/s10658-015-0672-1 Epitypification of Tilletia ehrhartae,asmutfungus with potential for nature conservation, biosecurity and biocontrol Marcin Piątek & Matthias Lutz & Adriaana Jacobs & Francis Villablanca & Alan R. Wood Accepted: 1 May 2015 /Published online: 21 May 2015 # The Author(s) 2015. This article is published with open access at Springerlink.com Abstract Tilletia ehrhartae, a smut fungus infecting caused by Tilletia indica (which is absent in Australia), perennial veldtgrass Ehrharta calycina,isepitypified and therefore constituting a potential risk for Australian and characterized using the Consolidated Species Con- wheat export. The current global distribution of Tilletia cept, including morphology, ecology (host plant) and ehrhartae, possible colonization history, and potential rDNA sequences (ITS and LSU). Tilletia ehrhartae is for nature conservation, biosecurity and biocontrol are native and endemic to the Cape Floral Kingdom discussed. The sequences generated in this work could (located entirely in South Africa), but it has also been serve as DNA barcodes to facilitate rapid identification introduced to the alien artificial range of Ehrharta of this important species. calycina in Australia and California. This smut has already caused some biosecurity problems in Australia Keywords Australia . California . Cape Floral as its spores were found to contaminate harvested wheat Kingdom . South Africa . Epitype . Plant pathogens . seeds, leading to confusion with Karnal bunt of wheat DNA barcodes M. Piątek (*) Department of Mycology, W. Szafer Institute of Botany, Introduction Polish Academy of Sciences, Lubicz 46, PL-31-512 Kraków, Poland The plant pathogenic teliosporic smut fungi are predom- e-mail: [email protected] inantly distributed with host plants growing in natural M. -
AR TICLE Nine Draft Genome Sequences of Claviceps Purpurea S
doi:10.5598/imafungus.2018.09.02.10 IMA FUNGUS · 9(2): 401–418 (2018) IMA Genome-F 10 ARTICLE Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans 1 A3B4, Miao Liu D3EF1%#4GB>4, Lieschen De Vos4I> 1 B4E34J4,5>I!K4, Kasia Dadej OB3A4B%1, >D$4,5>$PT=J4>K2PF4U$I1I$G1, Quentin C. Santana4PG1, Nicole Soal4[EG4!EE4>$F4, and Michael JB4 1U\]3$!^%!'*<!$UUP&<!*! 2>\3$!^%!&<&\&<<>>\*>&_! =#%4>@>G!K\`&<+=&q;;< Iq!K\ 43A4>A4>%A@%A@?$I I$A";<DI<<;+Gv^xABz%A@K 53!$[[G?$I$A{&>|*<;G Abstract: EClaviceps purpurea s.lat., including C. Key words: arundinis, C. humidiphila and C. cf. spartinae.E Davidsoniella eucalypti, Quambalaria eucalypti and Teratosphaeria destructans, . The insect associate Grosmannia galeiformis E Fusarium Eucalyptus circinatum } Fusarium fujikuroi"EF. Poaceae circinatum$&;F. circinatumE%%G! ". Article info: Gx;&F$;<&+vx;*F$;<&+vIx&q3;<&+. IMA Genome-F 10A ! Nine draft genome sequences of " Claviceps purpurea s.lat., including # et al. 1986, Miles et al. 1996, Scott 2009). These $[ C. arundinis, C. humidiphila and C. %&'*+! cf. spartinae 1976, Miles et al. &''*34et al. &''+;<<= $ conditions 34et al. &''+!;<<*>et INTRODUCTION al. 2006) ? $ "[ Claviceps purpurea (Clavicipitaceae, Hypocreales) is a plant \ (Poaceae \ @$ $$" © 2018 International Mycological Association You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: [ Non-commercial: No derivative works: For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. -
Simple and Rapid Detection of Tilletia Horrida Causing Rice Kernel Smut In
www.nature.com/scientificreports OPEN Simple and rapid detection of Tilletia horrida causing rice kernel smut in rice seeds Received: 15 January 2016 Yu Chen1,2,3, Xue Yang1,2,3, Jian Yao4, Ei Phyu Kyaw1,2,3,5, Ai-Fang Zhang1,2,3, Yun-Fei Li4, Accepted: 23 August 2016 Chun-Yan Gu1,2,3, Hao-Yu Zang1,2,3 & Tong-Chun Gao1,2,3 Published: 14 September 2016 A simple and rapid method for the detection of Tilletia horrida, the causal agent of rice kernel smut, in rice seeds is developed based on specific polymerase chain reaction (PCR). To design the specific primers for the detection of T. horrida, partial sequences of internal transcribed spacer (ITS) DNA region of T. horrida, T. controversa, T. walkeri, T. ehrhartae, T. indica and T. caries were analyzed and compared. A 503-bp fragment was amplified with the designed primers from theT. horrida genomic DNA. However, no PCR product was obtained from the DNA of other fiveTilletia species and 22 fungal plant pathogens tested in the present work indicating the specificity of the primers for the detection ofT. horrida. The PCR was performed by directly using the spores, isolated from the 21 different rice seed samples, as template DNA. The T. horrida was detected in 6 of the samples, indicating that 28.6% of the rice samples were contaminated with the kernel smut pathogen. This simple PCR based diagnostic assay can be applied for the direct and rapid detection and identification ofT. horrida to screen large numbers of rice seed samples. The cereal crop rice (Oryza sativa L.) is the staple food of over half of the world’s population1,2 that provides more than 50% of caloric intake3.