DEEP SEA CORALS: out of Sight, but No Longer out of Mind “At Fifteen Fathoms Depth
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Nikita Sergeenko
Habitat Complexity and Functional Ecology of Shallow Glass Sponge Reefs in Howe Sound, British Columbia by Nikita Sergeenko A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science Department of Biological Sciences University of Alberta © Nikita Sergeenko, 2021 Abstract The habitat complexity of an aquatic ecosystem plays an important role in niche partitioning and mediating the coexistence of numerous species within a given space. Studying the habitat complexity of glass sponge reefs along the British Columbia (BC) coast provides insight into how and why ecologically and commercially valuable species interact with the reefs. A first step is to establish a set of easily reproducible and accurate protocols for measuring the 3D habitat complexity of the reefs that can subsequently be related to the functional traits of the inhabiting community to determine which aspects of the physical complexity are important to the community. This thesis examines first methodology for quantifying structural complexity and second how structural complexity of sponge reefs influences community (species and traits) composition. The studies took place on several glass sponge reefs in Howe Sound, British Columbia. Chapter 2 of this thesis evaluates the repeatability and reproducibility of two underwater techniques to measure structural complexity, 3D structure-from-motion (SfM) photogrammetry and microtopographic laser scanning (MiLS). The measurement error of both techniques was compared from SCUBA diver surveys of three reef plots on the Inshore (Western) East Defence Islands glass sponge reef, in Howe Sound, BC. The measurement error for both techniques was inconsistent across the three plots and was positively correlated with the habitat complexity metrics rugosity and the ratio of surface area-to-planar area (SAPA). -
Elsevier First Proof
CLGY 00558 a0005 Trophic Structure E Preisser, University of Massachusetts at Amherst, Amherst, MA, USA ª 2007 Elsevier B.V. All rights reserved. Introduction Further Reading Control of Trophic Structure Energy transfer from producers to higher Factors Affecting Control of Trophic Structure trophic levels s0005 Introduction emphasizes the role(s) played by nutrient limitation and energetic inputs to producers and the subsequent effi- p0005 Trophic structure is defined as the partitioning of biomass ciency of energy transfer between trophic levels in between trophic levels (subsets of an ecological commu- determining the biomass accumulation at each trophic nity that gather energy and nutrients in similar ways, that level. The second category, top-down control, empha- is, producers, carnivores). The forces controlling biomass sizes the importance of predation in producing patterns accumulation at each trophic level have been a central of biomass accumulation that are often at odds with those concern of ecology dating from the early twentieth-cen- predicted byPROOF energy inputs alone. While recognizing the tury work of Elton and Lindeman. While interspecific differences between these two factors, it is also important interactions such as omnivory and intraguild predation to emphasize that both bottom-up and top-down factors can make it difficult to assign many organisms to a single represent extremes along a continuum of importance for trophic level, several broadly defined trophic levels are regulatory control. While ecologists debate the extent nonetheless clearly distinguishable. Primary producers, to which bottom-up versus top-down control influence autotrophic organisms (primarily plants and algae) that trophic structure in particular ecosystems, there is a broad convert light or chemical energy into biomass, make up consensus that both need to be considered when consid- the basal trophic level. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
As an Approach to the Cretaceous–Palaeogene Mass Extinction Event F
Geobiology (2009), 7, 533–543 DOI: 10.1111/j.1472-4669.2009.00213.x The environmental disaster of Aznalco´llar (southern Spain) as an approach to the Cretaceous–Palaeogene mass extinction event F. J. RODRI´ GUEZ-TOVAR1 ANDF.J.MARTI´ N-PEINADO2 1Departamento de Estratigrafı´a y Paleontologı´a, Universidad de Granada, Granada, Spain 2Departamento de Edafologı´a, Universidad de Granada, Granada, Spain ABSTRACT Biotic recovery after the Cretaceous–Palaeogene (K–Pg) impact is one unsolved question concerning this mass extinction event. To evaluate the incidence of the K–Pg event on biota, and the subsequent recovery, a recent environmental disaster has been analysed. Areas affected by the contamination disaster of Azna´ lcollar (province of Sevilla, southern Spain) in April 1998 were studied and compared with the K–Pg event. Several similarities (the sudden impact, the high levels of toxic components, especially in the upper thin lamina and the incidence on biota) and differences (the time of recovery and the geographical extension) are recognized. An in-depth geochemical analysis of the soils reveals their acidity (between 1.83 and 2.11) and the high concentration ) of pollutant elements, locally higher than in the K–Pg boundary layer: values up to 7.0 mg kg 1 for Hg, ) ) ) ) 2030.7 mg kg 1 for As, 8629.0 mg kg 1 for Pb, 86.8 mg kg 1 for Tl, 1040.7 mg kg 1 for Sb and 93.3– 492.7 p.p.b. for Ir. However, less than 10 years after the phenomenon, a rapid initial recovery in biota colonizing the contaminated, ‘unfavourable’, substrate is registered. -
Biological Oceanography - Legendre, Louis and Rassoulzadegan, Fereidoun
OCEANOGRAPHY – Vol.II - Biological Oceanography - Legendre, Louis and Rassoulzadegan, Fereidoun BIOLOGICAL OCEANOGRAPHY Legendre, Louis and Rassoulzadegan, Fereidoun Laboratoire d'Océanographie de Villefranche, France. Keywords: Algae, allochthonous nutrient, aphotic zone, autochthonous nutrient, Auxotrophs, bacteria, bacterioplankton, benthos, carbon dioxide, carnivory, chelator, chemoautotrophs, ciliates, coastal eutrophication, coccolithophores, convection, crustaceans, cyanobacteria, detritus, diatoms, dinoflagellates, disphotic zone, dissolved organic carbon (DOC), dissolved organic matter (DOM), ecosystem, eukaryotes, euphotic zone, eutrophic, excretion, exoenzymes, exudation, fecal pellet, femtoplankton, fish, fish lavae, flagellates, food web, foraminifers, fungi, harmful algal blooms (HABs), herbivorous food web, herbivory, heterotrophs, holoplankton, ichthyoplankton, irradiance, labile, large planktonic microphages, lysis, macroplankton, marine snow, megaplankton, meroplankton, mesoplankton, metazoan, metazooplankton, microbial food web, microbial loop, microheterotrophs, microplankton, mixotrophs, mollusks, multivorous food web, mutualism, mycoplankton, nanoplankton, nekton, net community production (NCP), neuston, new production, nutrient limitation, nutrient (macro-, micro-, inorganic, organic), oligotrophic, omnivory, osmotrophs, particulate organic carbon (POC), particulate organic matter (POM), pelagic, phagocytosis, phagotrophs, photoautotorphs, photosynthesis, phytoplankton, phytoplankton bloom, picoplankton, plankton, -
Regime Shifts Between Macrophytes and Phytoplankton – Concepts Beyond Shallow Lakes, Unravelling Stabilizing Mechanisms and Practical Consequences
Limnetica, 29 (2): x-xx (2011) Limnetica, 34 (2): 467-480 (2015). DOI: 10.23818/limn.34.35 c Asociación Ibérica de Limnología, Madrid. Spain. ISSN: 0213-8409 Regime shifts between macrophytes and phytoplankton – concepts beyond shallow lakes, unravelling stabilizing mechanisms and practical consequences Sabine Hilt∗ Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Müggelseedamm 301, 12587 Berlin, Germany. ∗ Corresponding author: [email protected] 2 Received: 04/11/2014 Accepted: 11/06/2015 ABSTRACT Regime shifts between macrophytes and phytoplankton – concepts beyond shallow lakes, unravelling stabilizing mechanisms and practical consequences Feedback mechanisms between macrophytes and water clarity resulting in the occurrence of alternative stable states have been described in a theoretical concept for shallow lakes. Here, I review recent studies applying the concept to other freshwater systems, unravelling stabilizing mechanisms and discussing consequences of regime shifts. Recent modelling studies predict that abrupt changes between clear and turbid water states can also occur in lowland rivers, both in time and in space. These findings were supported by long-term data from rivers in Spain and Germany. A deep lake model revealed that submerged macrophytes may also significantly reduce phytoplankton biomass by 50-15 % in 100-11 m deep and oligotrophic lakes. Some of the mechanisms stabilizing clear-water conditions are still far from fully understood. Available data suggest that the macrophyte community composition affects number and type of mechanisms stabilizing clear-water conditions. Allelopathic effects of macrophytes on phytoplankton are no longer doubted, however, bacterial colonization of macrophytes and phytoplankton, phytoplankton interactions, local adaptations and strain-specific sensitivities have been found to modulate these interactions. -
The Value of Kol River Salmon Refuge's Ecosystem Services
REPORT The Value of Kol River Salmon Refuge’s Ecosystem Services Research conducted by University of Vermont’s Department of Community Development & Applied Economics and Gund Institute for Ecological Economics Authored by: Charles Kerchner, Roelof Boumans, and William Boykin-Morris Date Report: November 23, 2008 Prepared for and funded by: Wild Salmon Center List of Tables and Figures………………………………………………………………………………...……………….iii Executive Summary….......………………………………………………………………………………..………………….iv Chapter 1: Introduction………………………………………………………………………………………………………1 1.1 Research Objective.……………………………………………………………………………………2 1.2 Background…………………………………………………………………..………..2 Chapter 2: Ecosystem Goods, Ecosystem Services, and Market Failure………………...…………4 2.1 Why Is This Important?…………………………………………….……………………………….5 2.2 Valuation Typology……………………………………………………………………...…………….6 Chapter 3: Methods 3.1 Step 1: Ecosystem Service Quantification in KOL RAV Model……...…...…10 3.1.1 Metadata: GIS Data Used for Land Use Land Cover...…………………....11 3.2 Ecosystem Service Valuatin in KOL RAV Model……………………………...……13 3.2.1 Benefits Transfer………………………………..………………………………………......…13 3.2.2 Benefits Transfer – Meta-analysis………………………………………...…………14 3.2.3 Site Specific Valuation for Water Surface ……………………………….…….18 3.3 Step 3 & 4: Kol Refuge Ecosystem Service Evaluation Model (KRESEM)………………………..………………...23 3.3.1 Step 3: GIS Compnonent of KRESEM…………………………………..……….24 3.3.2 Step 4: Development of SIMILE Interface and Land Cover Change Scenarios………………………………….……...25 Chapter 4: Results………………………………………………………………………………………………………...…..26 -
Tidal Interactions with Local Topography Above a Sponge Reef
Tidal Interactions with Local Topography Above a Sponge Reef by Jeannette Bedard BSc, Royal Roads Military College, 1994 A Thesis Submitted in Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE in the School of Earth and Ocean Science Jeannette Bedard, 2011 University of Victoria All rights reserved. This thesis may not be reproduced in whole or in part, by photocopy or other means, without the permission of the author. Library and Archives Bibliothèque et Canada Archives Canada Published Heritage Direction du Branch Patrimoine de l'édition 395 Wellington Street 395, rue Wellington Ottawa ON K1A 0N4 Ottawa ON K1A 0N4 Canada Canada Your file Votre référence ISBN: 978-0-494-82452-8 Our file Notre référence ISBN: 978-0-494-82452-8 NOTICE: AVIS: The author has granted a non- L'auteur a accordé une licence non exclusive exclusive license allowing Library and permettant à la Bibliothèque et Archives Archives Canada to reproduce, Canada de reproduire, publier, archiver, publish, archive, preserve, conserve, sauvegarder, conserver, transmettre au public communicate to the public by par télécommunication ou par l'Internet, prêter, telecommunication or on the Internet, distribuer et vendre des thèses partout dans le loan, distrbute and sell theses monde, à des fins commerciales ou autres, sur worldwide, for commercial or non- support microforme, papier, électronique et/ou commercial purposes, in microform, autres formats. paper, electronic and/or any other formats. The author retains copyright L'auteur conserve la propriété du droit d'auteur ownership and moral rights in this et des droits moraux qui protege cette thèse. -
Status of the Glass Sponge Reefs in the Georgia Basin Sarah E
Status of the glass sponge reefs in the Georgia Basin Sarah E. Cook, Kim W. Conway, Brenda Burd To cite this version: Sarah E. Cook, Kim W. Conway, Brenda Burd. Status of the glass sponge reefs in the Georgia Basin. Marine Environmental Research, Elsevier, 2008, 66, 10.1016/j.marenvres.2008.09.002. hal-00563054 HAL Id: hal-00563054 https://hal.archives-ouvertes.fr/hal-00563054 Submitted on 4 Feb 2011 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Accepted Manuscript Status of the glass sponge reefs in the Georgia Basin Sarah E. Cook, Kim W. Conway, Brenda Burd PII: S0141-1136(08)00204-3 DOI: 10.1016/j.marenvres.2008.09.002 Reference: MERE 3286 To appear in: Marine Environmental Research Received Date: 29 October 2007 Revised Date: 28 August 2008 Accepted Date: 2 September 2008 Please cite this article as: Cook, S.E., Conway, K.W., Burd, B., Status of the glass sponge reefs in the Georgia Basin, Marine Environmental Research (2008), doi: 10.1016/j.marenvres.2008.09.002 This is a PDF file of an unedited manuscript that has been accepted for publication. -
Variation in Environmental Conditions in a Subtidal Prey Refuge: Effects of Salinity Stress, Food Availability and Predation on Mussels in a Fjord System
Vol. 422: 201–210, 2011 MARINE ECOLOGY PROGRESS SERIES Published January 31 doi: 10.3354/meps08911 Mar Ecol Prog Ser Variation in environmental conditions in a subtidal prey refuge: effects of salinity stress, food availability and predation on mussels in a fjord system Stephen R. Wing1,*, James J. Leichter2 1Department of Marine Science, 310 Castle Street, University of Otago, Dunedin 9054, New Zealand 2Scripps Institution of Oceanography, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093, USA ABSTRACT: Prey refuges are fundamental structural features in communities. We investigated vari- ability in environmental conditions within a subtidal prey refuge for the blue mussel Mytilus edulis galloprovincialis formed by the persistent low-salinity layer (LSL) in Doubtful Sound, New Zealand. Multi-year observations and fine-scale oceanographic surveys along the axis of Doubtful Sound show strong spatial gradients in salinity, temperature, chlorophyll a (chl a) and nitrate concentrations. Mean surface salinity ranged from ~5 in the inner fjord zone to 15 in the mid-fjord, and 25 to 30 in the entrance zone. A marked subsurface maximum in chl a was observed below the LSL at 3 to 7 m depth. Adult blue mussels were confined to the LSL with a sharp decline in abundance from the entrance to the inner regions of the fjord. In contrast, mussel recruitment was observed both within and below the LSL to 10 m depth, with highest recruitment in the mid-fjord zone at 6 m depth. To test whether patterns in growth and survival in the absence of predation were coincident with food sup- ply and salinity stress, we transplanted mussels in predator exclusion cages at depths of 2, 4, 6, and 8 m within inner, mid-, and entrance fjord zones and measured growth over 213 d. -
The Boundary Reefs: Glass Sponge (Porifera: Hexactinellidae) Reefs on the International Border Between Canada and the United States
NOAA Technical Memorandum NMFS-AFSC-264 The Boundary Reefs: Glass Sponge (Porifera: Hexactinellidae) Reefs on the International Border Between Canada and the United States by R. P. Stone, K. W. Conway, D. J. Csepp, J. V. Barrie U.S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service Alaska Fisheries Science Center January 2014 NOAA Technical Memorandum NMFS The National Marine Fisheries Service's Alaska Fisheries Science Center uses the NOAA Technical Memorandum series to issue informal scientific and technical publications when complete formal review and editorial processing are not appropriate or feasible. Documents within this series reflect sound professional work and may be referenced in the formal scientific and technical literature. The NMFS-AFSC Technical Memorandum series of the Alaska Fisheries Science Center continues the NMFS-F/NWC series established in 1970 by the Northwest Fisheries Center. The NMFS-NWFSC series is currently used by the Northwest Fisheries Science Center. This document should be cited as follows: Stone, R. P., K. W. Conway, D. J. Csepp, and J. V. Barrie. 2013. The boundary reefs: glass sponge (Porifera: Hexactinellida) reefs on the international border between Canada and the United States. U.S. Dep. Commer., NOAA Tech. Memo. NMFS-AFSC-264, 31 p. Document available: http://www.afsc.noaa.gov/Publications/AFSC-TM/NOAA-TM-AFSC-264.pdf Reference in this document to trade names does not imply endorsement by the National Marine Fisheries Service, NOAA. NOAA Technical Memorandum NMFS-AFSC-264 The Boundary Reefs: Glass Sponge (Porifera: Hexactinellidae) Reefs on the International Border Between Canada and the United States by R. -
Paleoecology ...Of ... Reefs from the Late Jurassic
Project: Le “Vergleichende Palokologie und Faziesentwicklung oberjurassischer Riffstrukturen des westlichen Tethys-Nordrandes * und des Lusitanischen Beckens (Zentraiportugal)/E, Project Leader: R. Leinfelder (Stuttgart) . Paleoecology, Growth Parameters and Dynamics of Coral, Sponge and Microbolite Reefs from the Late Jurassic Reinhold R. Werner, Martin Nose, Dieter U. Schmid, Laternser, Martin Takacs & Dorothea Area of Study: Portugal, Spain, Southern Germany, France, Poland Environment: Shallow to deep carbonate platforms Stratigraphy: Late Jurassic Organisms: Corals, siliceous sponges, microbes, microen- crusters Depositional Setting: Brackish-lagoonal to deep ramp set- tings Constructive Processes: Frame-building, baffling and binding (depending on reef type and type of reef- building organisms) Destructive Processes: Borings by bivalves and sponges; wave action Preservation: Mostly well preserved Research Topic: Comparative facies analysis and paleo- ecology of Upper Jurassic reefs, reef organisms and communities Spongiolitic facies Fig. I: Distribution of Upper Jurassic reefs studied in detail. Abstract framework and pronounced relief whenever microbolite crusts provided stabilization. Reefs in steepened slope set- Reefs from the Late Jurassic comprise various types of tings are generally rich in microbolites because of bypass coral reefs, siliceous sponge reefs and microbolite reefs. possibilities for allochthonous sediment. Reef rimmed shal- Upper Jurassic corals had a higher ratio of heterotrophic low-water platforms did occur but only developed on pre- versus autotrophic energy uptake than modern ones, which existing uplifts. Upper Jurassic sponge-microbolite mud explains their frequent occurrence in terrigenous settings. mounds grew in subhorizontal mid to outer ramp settings Coral communities changed along a bathymetric gradient and reflect a delicate equilibrium of massive and peloidal but sedimentation exerted a stronger control on diversities microbolite precipitation and accumulation of allochthonous than bathymetry.