Classification of the Fungi Lmperfecti
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VOLUME 1 JUNE 2018 Fungal Systematics and Evolution PAGES 13–22 doi.org/10.3114/fuse.2018.01.02 Epitypification and re-description of the zombie-ant fungus, Ophiocordyceps unilateralis (Ophiocordycipitaceae) H.C. Evans1,2*, J.P.M. Araújo3, V.R. Halfeld4, D.P. Hughes3 1CAB International, UK Centre, Egham, Surrey, UK 2Departamentos de Entomologia e Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil 3Departments of Entomology and Biology, Penn State University, University Park, Pennsylvania, USA 4Universidade Federal de Juiz de Fora, Juiz de Fora, Minas Gerais, Brazil *Corresponding author: [email protected] Key words: Abstract: The type of Ophiocordyceps unilateralis (Ophiocordycipitaceae, Hypocreales, Ascomycota) is based on an Atlantic rainforest immature specimen collected on an ant in Brazil. The host was identified initially as a leaf-cutting ant (Atta cephalotes, Camponotus sericeiventris Attini, Myrmicinae). However, a critical examination of the original illustration reveals that the host is the golden carpenter ants carpenter ant, Camponotus sericeiventris (Camponotini, Formicinae). Because the holotype is no longer extant and epitype the original diagnosis lacks critical taxonomic information – specifically, on ascus and ascospore morphology – a new Ophiocordyceps type from Minas Gerais State of south-east Brazil is designated herein. A re-description of the fungus is provided and phylogeny a new phylogenetic tree of the O. unilateralis clade is presented. It is predicted that many more species of zombie- ant fungi remain to be delimited within the O. unilateralis complex worldwide, on ants of the tribe Camponotini. Published online: 15 December 2017. Editor-in-Chief INTRODUCTIONProf. dr P.W. Crous, Westerdijk Fungal Biodiversity Institute, P.O. -
Hyphomycetes from the Great Smoky Mountains National Park, Including Three New Species
Fungal Diversity Hyphomycetes from the Great Smoky Mountains National Park, including three new species Huzefa A. Raja1, Alberto M. Stchigel2, Andrew N. Miller3*, J. L. Crane3, 1 and Carol A. Shearer 1Department of Plant Biology, University of Illinois, Urbana, Illinois 61801, USA. 2Unitat de Microbiologia, Universitat Rovira i Virgili, Sant Llorenç 21, 43201 Reus, Spain. 3Section for Biodiversity, Illinois Natural History Survey, Champaign, Illinois 61820-6970, USA. Raja, H.A., Stchigel, A.M., Miller, A.N., Crane, J.L. and Shearer, C.A. (2007). Hyphomycetes from the Great Smoky Mountains National Park, including three new species. Fungal Diversity 26: 271-286. As part of the All Taxa Biotic Inventory currently being conducted in the Great Smoky Mountains National Park, samples of woody debris in freshwater and terrestrial habitats as well as leaves and soil organic matter in terrestrial habitats were collected and studied to detect the presence of hyphomycetes. Sixty hyphomycetes are reported here, and three new species are described and illustrated. Eleven species are new records for the USA, and fifteen species are new records for the park. Key words: anamorph, fresh water, mitosporic, systematics, wood Introduction An All Taxa Biotic Inventory (ATBI) is currently underway in the Great Smoky Mountains National Park (GSMNP), USA. In conjunction with a non- profit organization, Discover Life In America (DLIA), the aim of the ATBI is to inventory all life forms in the park. Goals of the ATBI are to determine: 1) what species exist in the park; 2) where the species occur in the park; and, 3) the roles species play in the park ecosystems (Sharkey, 2001). -
Introduction to Mycology
INTRODUCTION TO MYCOLOGY The term "mycology" is derived from Greek word "mykes" meaning mushroom. Therefore mycology is the study of fungi. The ability of fungi to invade plant and animal tissue was observed in early 19th century but the first documented animal infection by any fungus was made by Bassi, who in 1835 studied the muscardine disease of silkworm and proved the that the infection was caused by a fungus Beauveria bassiana. In 1910 Raymond Sabouraud published his book Les Teignes, which was a comprehensive study of dermatophytic fungi. He is also regarded as father of medical mycology. Importance of fungi: Fungi inhabit almost every niche in the environment and humans are exposed to these organisms in various fields of life. Beneficial Effects of Fungi: 1. Decomposition - nutrient and carbon recycling. 2. Biosynthetic factories. The fermentation property is used for the industrial production of alcohols, fats, citric, oxalic and gluconic acids. 3. Important sources of antibiotics, such as Penicillin. 4. Model organisms for biochemical and genetic studies. Eg: Neurospora crassa 5. Saccharomyces cerviciae is extensively used in recombinant DNA technology, which includes the Hepatitis B Vaccine. 6. Some fungi are edible (mushrooms). 7. Yeasts provide nutritional supplements such as vitamins and cofactors. 8. Penicillium is used to flavour Roquefort and Camembert cheeses. 9. Ergot produced by Claviceps purpurea contains medically important alkaloids that help in inducing uterine contractions, controlling bleeding and treating migraine. 10. Fungi (Leptolegnia caudate and Aphanomyces laevis) are used to trap mosquito larvae in paddy fields and thus help in malaria control. Harmful Effects of Fungi: 1. -
What Are Fungi?
Medical Mycology (BIOL 4849) Summer 2007 Dr. Cooper What are Fungi? Fungi in the Tree of Life • Living organisms on earth first arose about 3.5 billion years ago – Prokaryotic – Anaerobic • Oldest fossils of fungi are about 460 million years old • Coincides with the rapid expansion of multi-cellular organisms • Major multicellular eukaryotes are divided into Kingdoms – Animals – Plants – Fungi • Each of these three kingdoms differ in their basic cellular structure and mode of nutrition (defined by Whittaker, 1969) – Plants - photosynthetic, cellulosic cell walls – Animals - digestive systems, wall-less cells – Fungi - absorptive nutrition, chitinous walls • The estimates for the expansion of multicellular organisms are based upon phylogenetic analyses of Carl Woese – Examined ribosomal RNA (rRNA) • Present in prokaryotes and eukaryotes • Relatively stable, but changes occur over time; thereby acting as a chronometer – Distinguished three separate groups (Domains) of living organisms • Domains - rRNA sequence differences correlate with differences in cellular structure and physiology – Bacteria - “true bacteria” – Archaea - “ancient prokaryotes” – Eucarya - eukaryotes • Taxonomic grouping of “Kingdom” lies beneath that of “Domain” • Though the fossil evidence suggests fungi were present on earth about 450 million years ago, aquatic fungi (Phylum Chytridiomycota) most likely were present about a million years before this time Page 1 of 15 Copyright © 2007 Chester R. Cooper, Jr. Medical Mycology (BIOL 4849) Lecture 1, Summer 2007 • About -
Chapter 5 Conidiophore Initiation and Conidiogenesis 5.1
102 Chapter 5 Conidiophore initiation and conidiogenesis 5.1 INTRODUCTION In this chapter are described the processes of conidiophore initiation and conidiogenesis in some Australian cercosporoid fungi. The involvement of wall layers of the conidiophore mother cell in conidiophore initiation is examined, and the events involved in conidiogenesis are then considered in terms of the following successive developmental steps proposed by Minter et al. (1982). (a) Conidiophore initiation. Ultrastructural studies showed that the production of conidiophores from stroma cells in Cercospora beticola can be enteroblastic or holoblastic (Pons et al., 1985). In enteroblastic initiation, the outer, opaque layer of the conidiophore wall was continuous with the middle wall layer of the stroma cell. The outer layer of the generative cell either stopped abruptly or else merged imperceptibly with the wall of the conidiophore. The latter type of conidiophore initiation resembled that from vegetative hyphae in Pleiochaeta setosa (Kirchn.) Hughes (Harvey, 1974). (b) Conidium ontogeny, described as 'the ways in which conidial cell walls are produced' (Minter et al., 1982). The accepted view that conidium initiation is holoblastic in the cercosporoid fungi (Ellis, 1971) was supported by the results of Pons et al. (1985). (c) Conidium delimitation, described as 'the ways in which delimiting septa are produced' (Minter et al., 1982). Every conidium is delimited by a septum prior to abscission, but the exact structure of the septum, the stage of development at which it is formed (relative to the stage of expansion of the conidium) and the timing of the plugging of the septal pore by Woronin bodies (which interrupt its cytoplasmic connection with the conidiogenous cell) can vary. -
Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
Biology of Fungi, Lecture 2: the Diversity of Fungi and Fungus-Like Organisms
Biology of Fungi, Lecture 2: The Diversity of Fungi and Fungus-Like Organisms Terms You Should Understand u ‘Fungus’ (pl., fungi) is a taxonomic term and does not refer to morphology u ‘Mold’ is a morphological term referring to a filamentous (multicellular) condition u ‘Mildew’ is a term that refers to a particular type of mold u ‘Yeast’ is a morphological term referring to a unicellular condition Special Lecture Notes on Fungal Taxonomy u Fungal taxonomy is constantly in flux u Not one taxonomic scheme will be agreed upon by all mycologists u Classical fungal taxonomy was based primarily upon morphological features u Contemporary fungal taxonomy is based upon phylogenetic relationships Fungi in a Broad Sense u Mycologists have traditionally studied a diverse number of organisms, many not true fungi, but fungal-like in their appearance, physiology, or life style u At one point, these fungal-like microbes included the Actinomycetes, due to their filamentous growth patterns, but today are known as Gram-positive bacteria u The types of organisms mycologists have traditionally studied are now divided based upon phylogenetic relationships u These relationships are: Q Kingdom Fungi - true fungi Q Kingdom Straminipila - “water molds” Q Kingdom Mycetozoa - “slime molds” u Kingdom Fungi (Mycota) Q Phylum: Chytridiomycota Q Phylum: Zygomycota Q Phylum: Glomeromycota Q Phylum: Ascomycota Q Phylum: Basidiomycota Q Form-Phylum: Deuteromycota (Fungi Imperfecti) Page 1 of 16 Biology of Fungi Lecture 2: Diversity of Fungi u Kingdom Straminiplia (Chromista) -
Escovopsis Trichodermoides Sp. Nov., Isolated from a Nest of the Lower Attine Ant Mycocepurus Goeldii
Antonie van Leeuwenhoek (2015) 107:731–740 DOI 10.1007/s10482-014-0367-1 ORIGINAL PAPER Escovopsis trichodermoides sp. nov., isolated from a nest of the lower attine ant Mycocepurus goeldii Virginia E. Masiulionis • Marta N. Cabello • Keith A. Seifert • Andre Rodrigues • Fernando C. Pagnocca Received: 30 April 2014 / Accepted: 18 December 2014 / Published online: 10 January 2015 Ó Springer International Publishing Switzerland 2015 Abstract Currently, five species are formally other species by highly branched, trichoderma-like described in Escovopsis, a specialized mycoparasitic conidiophores lacking swollen vesicles, with reduced genus of fungus gardens of attine ants (Hymenoptera: conidiogenous cells and distinctive conidia morphol- Formicidae: tribe Attini). Four species were isolated ogy. Phylogenetic analyses based on partial tef1 gene from leaf-cutting ants in Brazil, including Escovopsis sequences support the distinctiveness of this species. moelleri and Escovopsis microspora from nests of A portion of the internal transcribed spacers of the Acromyrmex subterraneus molestans, Escovopsis nuclear rDNA was sequenced to serve as a DNA weberi from a nest of Atta sp. and Escovopsis barcode. Future molecular and morphological studies lentecrescens from a nest of Acromyrmex subterran- in this group of fungi will certainly unravel the eus subterraneus. The fifth species, Escovopsis taxonomic diversity of Escovopsis associated with aspergilloides was isolated from a nest of the higher fungus-growing ants. attine ant Trachymyrmex ruthae from Trinidad. Here, we describe a new species, Escovopsis trichodermo- Keywords Attini Á Fungus-growing ant Á ides isolated from a fungus garden of the lower attine Hypocreales Á Mycoparasitism ant Mycocepurus goeldii, which differs from the five V. -
Hyphomycetes Schimmelcultures
PERSOONIA Published by the Rijksherbarium, Leiden Volume Part 7, a, pp. 161-169 (1973) Phialides with solitary conidia? in Remarks on condium ontogeny some Hyphomycetes W. Gams Centraalbureau voor Schimmelcultures, Baarn (With six Text-figures) Conidium formation in some species of Aphanocladium W. Gams, Ver- ticimonosporium Matsushima, Sibirina Arnold, Pseudofusarium Matsushima and Craspedodidymum Hol.-Jech. is discussed and compared with other cells with with serial examples. Conidiogenous solitary and conidia may in related It is whether occur apparently closely species. questionable, the be the latter term phialides has to restricted to group. and Sibirina are The new species Aphanocladium spectabile orthospora described. Conidium is the criterium in the of ontogeny becoming dominating taxonomy the hyphomycetes. One of the most common propagative structures is phialide, which since Hughes (1951 and 1953) and more explicitly in Kendrick (1971) is of conidia defined as a 'cell producing from a fixed locus a basipetal succession whose walls arise de novo'. In the introduction to the monograph of Cephalosporium- like several of hyphomycetes (Gams, 1971a) morphological types phialides were distinguished according to the insertion in the subtending hyphae and designated with the nouns orthophialide, plagiophialide, schizophialide, etc. Although an adjectivic terminology is now preferable (Kendrick, 1971), the distinctions introduced have proved their usefulness. The introduced in rather Vuillemin term phialide was a vague circumscription by (1910) to include also fungi with solitary conidia, such as Beauveria (cf. Mason, 1933). Whereas this type of conidium formation is now considered as holoblasdc, some other exist whose cells resemble but fungi conidiogenous very strongly phialides produce only solitary conidia; they will be discussed in this contribution. -
Mold Scan Legend
Assured Bio Labs, LLC Direct Examination Analysis 228 Midway Lane, Suite B Oak Ridge, TN 37830 www.assuredbio.com REVIEWED by Edward A. Sobek, Ph.D. at 04:52 PM, Sep 28, 2017 Inspector: Mold Inspector Date Collected: Sep/27/2017 Project: 101 Aspergillus Lane, Hyphae, TN 37830 Date Received: Sep/29/2017 Job Number: 10-11 Date Reported: Sep/28/2017 Assured Bio Identifier: MI092917-99 Analyst: D. Graves Mold Scan Legend FUNGAL ECOLOGY SCORE(FES)*-This score(below each sample's results) is based upon the total spores present, spore load levels, and spore types detected in the spore trap, as well as a comparison of the indoor sample to the outdoor sample. The conditions calculated from the Fungal Ecology Score are based upon the conditions present in the 2003 Standard and Reference Guide for Professional Mold Remediation S520 published by the Institute of Inspection, Cleaning and Restoration Certification (IICRC), as well as other current publications in the field of mycology and indoor air quality. The FES can be interpreted using the chart below. FUNGAL ECOLOGY SCORE INTERPRETATION 1=BALANCED-At the time of sampling, the indoor air spore load and spore composition, alone, is not suggestive of mold contamination or mold reproduction. 2=MINOR DISTURBANCE-At the time of sampling, the indoor air spore load and spore composition suggest that mold contamination may be occurring or has occurred in the past. Further investigation, by a Certified Indoor Environmentalist, may be necessary to determine if mold contamination is currently a problem. 3=MAJOR DISTURBANCE-At the time of sampling, the indoor air spore load and composition suggest that mold spores are becoming airborne at a high rate, and that certain indicator mold species are present. -
Fungal Systematics and Evolution PAGES 13–22
VOLUME 1 JUNE 2018 Fungal Systematics and Evolution PAGES 13–22 doi.org/10.3114/fuse.2018.01.02 Epitypification and re-description of the zombie-ant fungus, Ophiocordyceps unilateralis (Ophiocordycipitaceae) H.C. Evans1,2*, J.P.M. Araújo3, V.R. Halfeld4, D.P. Hughes3 1CAB International, UK Centre, Egham, Surrey, UK 2Departamentos de Entomologia e Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil 3Departments of Entomology and Biology, Penn State University, University Park, Pennsylvania, USA 4Universidade Federal de Juiz de Fora, Juiz de Fora, Minas Gerais, Brazil *Corresponding author: [email protected] Key words: Abstract: The type of Ophiocordyceps unilateralis (Ophiocordycipitaceae, Hypocreales, Ascomycota) is based on an Atlantic rainforest immature specimen collected on an ant in Brazil. The host was identified initially as a leaf-cutting ant (Atta cephalotes, Camponotus sericeiventris Attini, Myrmicinae). However, a critical examination of the original illustration reveals that the host is the golden carpenter ants carpenter ant, Camponotus sericeiventris (Camponotini, Formicinae). Because the holotype is no longer extant and epitype the original diagnosis lacks critical taxonomic information – specifically, on ascus and ascospore morphology – a new Ophiocordyceps type from Minas Gerais State of south-east Brazil is designated herein. A re-description of the fungus is provided and phylogeny a new phylogenetic tree of the O. unilateralis clade is presented. It is predicted that many more species of zombie- ant fungi remain to be delimited within the O. unilateralis complex worldwide, on ants of the tribe Camponotini. Published online: 15 December 2017. Editor-in-Chief INTRODUCTIONProf. dr P.W. Crous, Westerdijk Fungal Biodiversity Institute, P.O. -
The Genus Simplicillium
A peer-reviewed open-access journal MycoKeys 60: 69–92 (2019) The genus Simplicillium 69 doi: 10.3897/mycokeys.60.38040 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research The genus Simplicillium De-Ping Wei1,2,3,4, Dhanushka N. Wanasinghe3,5, Kevin D. Hyde2,4, Peter E. Mortimer3, Jianchu Xu3,5, Yuan-Pin Xiao2,6,7, Chitrabhanu S. Bhunjun2,7, Chaiwat To-anun1 1 Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, 50200, Thailand 2 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand3 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China 4 Mushroom Research Foundation, 128 M.3 Ban Pa Deng T. Pa Pae, A. Mae Taeng, Chiang Mai 50150, Thailand5 World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, China 6 Engineering Research Center of Southwest Bio- Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang, Guizhou Province, 550025, China 7 School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand Corresponding author: Peter E. Mortimer ([email protected]) Academic editor: Cecile Gueidan | Received 6 July2019 | Accepted 9 September 2019 | Published 19 November 2019 Citation: Wei D-P, Wanasinghe DN, Hyde KD, Mortimer PE, Xu J-C, Xiao Y-P, Bhunjun CS, To-anun C (2019) The genus Simplicillium. MycoKeys 60: 69–92. https://doi.org/10.3897/mycokeys.60.38040 Abstract Simplicillium species have a wide host range and an extensive distribution. Some species are associated with rusts, as well as other plant pathogenic fungi and play an important role in biological control.