Biocatalyzed Synthesis of Statins: a Sustainable Strategy for the Preparation of Valuable Drugs
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(+)-Obafluorin, a B-Lactone Antibiotic
Illinois Wesleyan University Digital Commons @ IWU Honors Projects Chemistry 4-26-1996 Pursuit of a Chiral Amino Aldehyde Intermediate in the Synthesis of (+)-Obafluorin, a B-Lactone Antibiotic Jim Cwik '96 Illinois Wesleyan University Follow this and additional works at: https://digitalcommons.iwu.edu/chem_honproj Part of the Chemistry Commons Recommended Citation Cwik '96, Jim, "Pursuit of a Chiral Amino Aldehyde Intermediate in the Synthesis of (+)- Obafluorin, a B-Lactone Antibiotic" (1996). Honors Projects. 15. https://digitalcommons.iwu.edu/chem_honproj/15 This Article is protected by copyright and/or related rights. It has been brought to you by Digital Commons @ IWU with permission from the rights-holder(s). You are free to use this material in any way that is permitted by the copyright and related rights legislation that applies to your use. For other uses you need to obtain permission from the rights-holder(s) directly, unless additional rights are indicated by a Creative Commons license in the record and/ or on the work itself. This material has been accepted for inclusion by faculty at Illinois Wesleyan University. For more information, please contact [email protected]. ©Copyright is owned by the author of this document. Pursuit of a Chiral Amino Aldehyde Intermediate in the Synthesis of (+)-Obafluorin, a p-Lactone Antibiotic Jim Cwik Dr. Jeffrey A. Frick, Research Advisor Submitted in Partial Fulfillment of the Requirement for Research Honors in Chemistry and Chemistry 499 Illinois Wesleyan University April 26, 1996 - Table of Contents I. List of Spectral Data , 2 II. Abstract. 3 III. Background 4 IV. Introduction 6 V. -
Amplitaq and Amplitaq Gold DNA Polymerase
AmpliTaq and AmpliTaq Gold DNA Polymerase The Most Referenced Brand of DNA Polymerase in the World Date: 2005-05 Notes: Authors are listed alphabetically J. Biol. Chem. (223) Ezoe, S., I. Matsumura, et al. (2005). "GATA Transcription Factors Inhibit Cytokine-dependent Growth and Survival of a Hematopoietic Cell Line through the Inhibition of STAT3 Activity." J. Biol. Chem. 280(13): 13163-13170. http://www.jbc.org/cgi/content/abstract/280/13/13163 Although GATA-1 and GATA-2 were shown to be essential for the development of hematopoietic cells by gene targeting experiments, they were also reported to inhibit the growth of hematopoietic cells. Therefore, in this study, we examined the effects of GATA-1 and GATA-2 on cytokine signals. A tamoxifen-inducible form of GATA-1 (GATA-1/ERT) showed a minor inhibitory effect on interleukin-3 (IL-3)-dependent growth of an IL-3-dependent cell line Ba/F3. On the other hand, it drastically inhibited TPO-dependent growth and gp130-mediated growth/survival of Ba/F3. Similarly, an estradiol-inducible form of GATA-2 (GATA-2/ER) disrupted thrombopoietin (TPO)-dependent growth and gp130-mediated growth/survival of Ba/F3. As for this mechanism, we found that both GATA-1 and GATA-2 directly bound to STAT3 both in vitro and in vivo and inhibited its DNA-binding activity in gel shift assays and chromatin immunoprecipitation assays, whereas they hardly affected STAT5 activity. In addition, endogenous GATA-1 was found to interact with STAT3 in normal megakaryocytes, suggesting that GATA-1 may inhibit STAT3 activity in normal hematopoietic cells. -
PRODUCT INFORMATION Geranyl Pyrophosphate (Triammonium Salt) Item No
PRODUCT INFORMATION Geranyl Pyrophosphate (triammonium salt) Item No. 63320 CAS Registry No.: 116057-55-7 Formal Name: 3E,7-dimethyl-2,6-octadienyl- diphosphoric acid, triammonium salt Synonyms: GDP, Geranyl Diphosphate, GPP MF: C10H20O7P2 · 3NH3 FW: 365.3 O O Purity: ≥90% (NH +) – O P O P O Supplied as: A solution in methanol 4 3 Storage: -20°C O– O– Stability: ≥2 years Information represents the product specifications. Batch specific analytical results are provided on each certificate of analysis. Laboratory Procedures Geranyl pyrophosphate (triammonium salt) is supplied as a solution in methanol. To change the solvent, simply evaporate the methanol under a gentle stream of nitrogen and immediately add the solvent of choice. A stock solution may be made by dissoving the geranyl pyrophosphate (triammonium salt) in the solvent of choice. Geranyl pyrophosphate (triammonium salt) is slightly soluble in water. Description Geranyl pyrophosphate is an intermediate in the mevalonate pathway. It is formed from dimethylallyl pyrophosphate (DMAPP; Item No. 63180) and isopentenyl pyrophosphate by geranyl pyrophosphate synthase.1 Geranyl pyrophosphate is used in the biosynthesis of farnesyl pyrophosphate (Item No. 63250), geranylgeranyl pyrophosphate (Item No. 63330), cholesterol, terpenes, and terpenoids. Reference 1. Dorsey, J.K., Dorsey, J.A. and Porter, J.W. The purification and properties of pig liver geranyl pyrophosphate synthetase. J. Biol. Chem. 241(22), 5353-5360 (1966). WARNING CAYMAN CHEMICAL THIS PRODUCT IS FOR RESEARCH ONLY - NOT FOR HUMAN OR VETERINARY DIAGNOSTIC OR THERAPEUTIC USE. 1180 EAST ELLSWORTH RD SAFETY DATA ANN ARBOR, MI 48108 · USA This material should be considered hazardous until further information becomes available. -
Lanosterol 14Α-Demethylase (CYP51)
463 Lanosterol 14-demethylase (CYP51), NADPH–cytochrome P450 reductase and squalene synthase in spermatogenesis: late spermatids of the rat express proteins needed to synthesize follicular fluid meiosis activating sterol G Majdicˇ, M Parvinen1, A Bellamine2, H J Harwood Jr3, WWKu3, M R Waterman2 and D Rozman4 Veterinary Faculty, Clinic of Reproduction, Cesta v Mestni log 47a, 1000 Ljubljana, Slovenia 1Institute of Biomedicine, Department of Anatomy, University of Turku, Kiinamyllynkatu 10, FIN-20520 Turku, Finland 2Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee 37232–0146, USA 3Pfizer Central Research, Department of Metabolic Diseases, Box No. 0438, Eastern Point Road, Groton, Connecticut 06340, USA 4Institute of Biochemistry, Medical Center for Molecular Biology, Medical Faculty University of Ljubljana, Vrazov trg 2, SI-1000 Ljubljana, Slovenia (Requests for offprints should be addressed to D Rozman; Email: [email protected]) (G Majdicˇ is now at Department of Internal Medicine, UT Southwestern Medical Center, Dallas, Texas 75235–8857, USA) Abstract Lanosterol 14-demethylase (CYP51) is a cytochrome detected in step 3–19 spermatids, with large amounts in P450 enzyme involved primarily in cholesterol biosynthe- the cytoplasm/residual bodies of step 19 spermatids, where sis. CYP51 in the presence of NADPH–cytochrome P450 P450 reductase was also observed. Squalene synthase was reductase converts lanosterol to follicular fluid meiosis immunodetected in step 2–15 spermatids of the rat, activating sterol (FF-MAS), an intermediate of cholesterol indicating that squalene synthase and CYP51 proteins are biosynthesis which accumulates in gonads and has an not equally expressed in same stages of spermatogenesis. additional function as oocyte meiosis-activating substance. -
• Our Bodies Make All the Cholesterol We Need. • 85 % of Our Blood
• Our bodies make all the cholesterol we need. • 85 % of our blood cholesterol level is endogenous • 15 % = dietary from meat, poultry, fish, seafood and dairy products. • It's possible for some people to eat foods high in cholesterol and still have low blood cholesterol levels. • Likewise, it's possible to eat foods low in cholesterol and have a high blood cholesterol level SYNTHESIS OF CHOLESTEROL • LOCATION • All tissues • Liver • Cortex of adrenal gland • Gonads • Smooth endoplasmic reticulum Cholesterol biosynthesis and degradation • Diet: only found in animal fat • Biosynthesis: primarily synthesized in the liver from acetyl-coA; biosynthesis is inhibited by LDL uptake • Degradation: only occurs in the liver • Cholesterol is only synthesized by animals • Although de novo synthesis of cholesterol occurs in/ by almost all tissues in humans, the capacity is greatest in liver, intestine, adrenal cortex, and reproductive tissues, including ovaries, testes, and placenta. • Most de novo synthesis occurs in the liver, where cholesterol is synthesized from acetyl-CoA in the cytoplasm. • Biosynthesis in the liver accounts for approximately 10%, and in the intestines approximately 15%, of the amount produced each day. • Since cholesterol is not synthesized in plants; vegetables & fruits play a major role in low cholesterol diets. • As previously mentioned, cholesterol biosynthesis is necessary for membrane synthesis, and as a precursor for steroid synthesis including steroid hormone and vitamin D production, and bile acid synthesis, in the liver. • Slightly less than half of the cholesterol in the body derives from biosynthesis de novo. • Most cells derive their cholesterol from LDL or HDL, but some cholesterol may be synthesize: de novo. -
UNITED STATES PATENT Office PREPARATION of BETA-Akoxy MONO Carboxylcacds Frederick E
Patented July 4, 1944 UNITED STATES PATENT office PREPARATION OF BETA-AKOxY MONO CARBOXYLCACDs Frederick E. King, Akron, Ohio, assignor to The B. F. Goodrich Company, New corporation of New York . York, N. Y., a No Drawing. Application August 5, 1941, Sera No. 405,512 4 Claims. (CL 260-535) This invention relates to a novel process for at least one hydrogen atom on the alpha carbon the preparation of beta-alkoxy derivatives of atom, for example, beta-lactones of saturated monocarboxylic acids, particularly beta-alkoxy aliphatic monocarboxylic acids such as beta-hy derivatives of saturated aliphatic monocarboxylic droxypropionic acid lactone, commonly known as acids such as beta-alkoxy proponic acids, and to 5 hydracrylic acid lactone, beta-hydroxy butyric the conversion of such acids into alkyl esters of acid lactone, alpha-methyl hydracrylic acid lac alpha beta unsaturated monocarboxylic acids tone, beta-hydroxy n-valeric acid actone, beta such as the alkyl esters of acrylic and meth hydroxy alpha-methyl butyric acid lactone, al acrylic acids. - - pharethyl hydracrylic acid lactone, beta-hydroxy In a copending application Serial No. 393,671, 0 isovaleric acid lactone, beta-hydroxy n-caproic filed May 15, 1941, an economical method of pre acid lactone, beta-hydroxy alpha-methyl valeric paring lactones of beta-hydroxy Carboxylic acids acid lactone, beta-methyl beta-ethyl hydracrylic from the reaction of a ketene with a carbonyl acid lactone, alpha-methyl beta-ethylhydracrylic compound such as an aldehyde or ketone has acid lactone, alpha-propyl -
CYP2A6) by P53
Transcriptional Regulation of Human Stress Responsive Cytochrome P450 2A6 (CYP2A6) by p53 Hao Hu M.Biotech. (Biotechnology) 2012 The University of Queensland B.B.A. 2009 University of Electronic Science and Technology of China B.Sc. (Pharmacy) 2009 University of Electronic Science and Technology of China A thesis submitted for the degree of Doctor of Philosophy at The University of Queensland in 2016 School of Medicine ABSTRACT Human cytochrome P450 (CYP) 2A6 is highly expressed in the liver and the encoding gene is regulated by various stress activated transcription factors, such as the nuclear factor (erythroid-derived 2)-like 2 (Nrf-2). Unlike the other xenobiotic metabolising CYP enzymes (XMEs), CYP2A6 only plays a minor role in xenobiotic metabolism. The CYP2A6 is highly induced by multiple forms of cellular stress conditions, where XMEs expression is normally inhibited. Recent findings suggest that the CYP2A6 plays an important role in regulating BR homeostasis. A computer based sequence analysis on the 3 kb proximate CYP2A6 promoter revealed several putative binding sites for p53, a protein that mediates regulation of antioxidant and apoptosis pathways. In this study, the role of p53 in CYP2A6 gene regulation is demonstrated. The site closest to transcription start site (TSS) is highly homologous with the p53 consensus sequence. The p53 responsiveness of this site was confirmed by transfections with various stepwise deleted of CYP2A6-5’-Luc constructs containing the putative p53RE. Deletion of the putative p53RE resulted in a total abolishment of p53 responsiveness of CYP2A6 promoter. Specific binding of p53 to the putative p53RE was detected by electrophoresis mobility shift assay. -
Characterisation of Bilirubin Metabolic Pathway in Hepatic Mitochondria Siti Nur Fadzilah Muhsain M.Sc
Characterisation of Bilirubin Metabolic Pathway in Hepatic Mitochondria Siti Nur Fadzilah Muhsain M.Sc. (Medical Research) 2005 Universiti Sains Malaysia Postgrad. Dip. (Toxicology) 2003 University of Surrey B.Sc.(Biomed. Sc.) 2000 Universiti Putra Malaysia A thesis submitted for the degree of Doctor of Philosophy at The University of Queensland in 2014 School of Medicine ABSTRACT Bilirubin (BR), a toxic waste product of degraded haem, is a potent antioxidant at physiological concentrations. To achieve the maximum benefit of BR, its intracellular level needs to be carefully regulated. A system comprising of two enzymes, haem oxygenase-1 (HMOX1) and cytochrome P450 2A5 (CYP2A5) exists in the endoplasmic reticulum (ER), responsible for regulating BR homeostasis. This system is induced in response to oxidative stress. In this thesis, oxidative stress caused accumulation of these enzymes in mitochondria — major producers and targets of reactive oxygen species (ROS) — is demonstrated. To understand the significance of this intracellular targeting, properties of microsomal and mitochondrial BR metabolising enzymes were compared and the capacity of mitochondrial CYP2A5 to oxidise BR in response to oxidative stress is reported. Microsomes and mitochondrial fractions were isolated from liver homogenates of DBA/2J mice, administered with sub-toxic dose of pyrazole, an oxidant stressor. The purity of extracted organelles was determined by analysing the expressions and activities of their respective marker enzymes. HMOX1 and CYP2A5 were significantly increased in microsomes and even more so in mitochondria in response to pyrazole-induced oxidative stress. By contrast, the treatment did not increase either microsomes or mitochondrial Uridine-diphosphate-glucuronosyltransferase 1A1 (UGT1A1), the sole enzyme that catalyses BR elimination through glucuronidation. -
Diversity-Oriented Combinatorial Biosynthesis of Benzenediol Lactone Scaffolds by Subunit Shuffling of Fungal Polyketide Synthases
Diversity-oriented combinatorial biosynthesis of benzenediol lactone scaffolds by subunit shuffling of fungal polyketide synthases Yuquan Xua,b,1, Tong Zhouc,1, Shuwei Zhangc, Patricia Espinosa-Artilesb, Luoyi Wangc, Wei Zhanga, Min Lina, A. A. Leslie Gunatilakab,d, Jixun Zhanc,2, and István Molnárb,d,2 aBiotechnology Research Institute, The Chinese Academy of Agricultural Sciences, Beijing 100081, P. R. China; bNatural Products Center, School of Natural Resources and the Environment, University of Arizona, Tucson, AZ 85706; cDepartment of Biological Engineering, Utah State University, Logan, UT 84322; and dBio5 Institute, University of Arizona, Tucson, AZ 85721 Edited by Jerrold Meinwald, Cornell University, Ithaca, NY, and approved June 23, 2014 (received for review April 16, 2014) Combinatorial biosynthesis aspires to exploit the promiscuity of biosynthesis inhibitory activities in animals. 10,11-dehydrocurvularin microbial anabolic pathways to engineer the synthesis of new (7;Fig.1)isaDALwitha12-memberedring(DAL12)that chemical entities. Fungal benzenediol lactone (BDL) polyketides modulates the heat shock response and the immune system (8, 9). are important pharmacophores with wide-ranging bioactivities, BDL scaffolds are biosynthesized by pairs of collaborating, including heat shock response and immune system modulatory sequentially acting iterative polyketide synthases (iPKSs) (3) – effects. Their biosynthesis on a pair of sequentially acting iterative forming quasi-modular BDL synthases (BDLSs) (Fig. 1) (11 14). polyketide synthases (iPKSs) offers a test case for the modulariza- Each of the BDLS subunits catalyze recursive, decarboxylative tion of secondary metabolic pathways into “build–couple–pair” Claisen condensations of malonyl-CoA using a single core set of ketoacyl synthase (KS), acyl transferase (AT), and acyl carrier combinatorial synthetic schemes. -
Experiment 19 — Aldol Condensation
Chem 22 Spring 2010 Experiment 19 — Aldol Condensation _____________________________________________________________________________ Pre-lab preparation. (1) Write the mechanism of the base-catalyzed aldol condensation of acetone and a generalized aromatic aldehyde, Ar–CH=O to give the α,β-unsaturated product (i.e. the reaction at the top of the next page, but with a 1:1 ratio of ketone and aldehyde). Remember that dehydration in this case occurs under basic conditions, so it can't start with protonation of the hydroxyl group. Nor can it go via an E2 pathway. (2) Draw the structures of all the possible aldehyde and ketone reactants (not the 25 possible condensation products!). (3) The new CC double bonds of the condensation products are E rather than Z, as shown in the acetone example. Why? (4) What's the purpose of rinsing the crude product with dilute acetic acid, followed by ethanol? (5) What is the procedure for carrying out a single-solvent recrystallization? Write this out in detail. The aldol condensation has historically been one of the favorite tools in the synthetic organic chemist's repertoire because of its versatility in forming new CC bonds. Since its discovery in the 1870s the aldol condensation has been use extensively in the synthesis of natural products and other complex molecules. In a typical base-catalyzed aldol condensation an enolate ion attacks the carbonyl group of an aldehyde or ketone. This carbonyl addition produces a β-hydroxy carbonyl compound. In many cases the initially formed condensation product undergoes an "E1cB" dehydration to produce an α,β-unsaturated carbonyl compound as the final product. -
Heme Oxygenase-1 Regulates Mitochondrial Quality Control in the Heart
RESEARCH ARTICLE Heme oxygenase-1 regulates mitochondrial quality control in the heart Travis D. Hull,1,2 Ravindra Boddu,1,3 Lingling Guo,2,3 Cornelia C. Tisher,1,3 Amie M. Traylor,1,3 Bindiya Patel,1,4 Reny Joseph,1,3 Sumanth D. Prabhu,1,4,5 Hagir B. Suliman,6 Claude A. Piantadosi,7 Anupam Agarwal,1,3,5 and James F. George2,3,4 1Department of Medicine, 2Department of Surgery, 3Nephrology Research and Training Center, and 4Comprehensive Cardiovascular Center, University of Alabama at Birmingham, Birmingham, Alabama, USA. 5Department of Veterans Affairs, Birmingham, Alabama, USA. 6Department of Anesthesiology and 7Department of Pulmonary, Allergy and Critical Care, Duke University School of Medicine, Durham, North Carolina, USA. The cardioprotective inducible enzyme heme oxygenase-1 (HO-1) degrades prooxidant heme into equimolar quantities of carbon monoxide, biliverdin, and iron. We hypothesized that HO-1 mediates cardiac protection, at least in part, by regulating mitochondrial quality control. We treated WT and HO-1 transgenic mice with the known mitochondrial toxin, doxorubicin (DOX). Relative to WT mice, mice globally overexpressing human HO-1 were protected from DOX-induced dilated cardiomyopathy, cardiac cytoarchitectural derangement, and infiltration of CD11b+ mononuclear phagocytes. Cardiac-specific overexpression of HO-1 ameliorated DOX-mediated dilation of the sarcoplasmic reticulum as well as mitochondrial disorganization in the form of mitochondrial fragmentation and increased numbers of damaged mitochondria in autophagic vacuoles. HO-1 overexpression promotes mitochondrial biogenesis by upregulating protein expression of NRF1, PGC1α, and TFAM, which was inhibited in WT animals treated with DOX. Concomitantly, HO-1 overexpression inhibited the upregulation of the mitochondrial fission mediator Fis1 and resulted in increased expression of the fusion mediators, Mfn1 and Mfn2. -
Natural Isoprenoids Are Able to Reduce Inflammation in a Mouse
0031-3998/08/6402-0177 Vol. 64, No. 2, 2008 PEDIATRIC RESEARCH Printed in U.S.A. Copyright © 2008 International Pediatric Research Foundation, Inc. Natural Isoprenoids are Able to Reduce Inflammation in a Mouse Model of Mevalonate Kinase Deficiency ANNALISA MARCUZZI, ALESSANDRA PONTILLO, LUIGINA DE LEO, ALBERTO TOMMASINI, GIULIANA DECORTI, TARCISIO NOT, AND ALESSANDRO VENTURA Department of Reproductive and Developmental Sciences [A.M., L.L., A.T., TN, A.V.], Department of Biomedical Sciences [G.D.], University of Trieste, 34137 Trieste, Italy; Paediatric Division [A.P., A.T., T.N., A.V.], Institute of Child Health IRCCS Burlo Garofolo, 34137 Trieste, Italy ABSTRACT: Mevalonate kinase deficiency (MKD) is a rare ataxia, cerebellar atrophy, psychomotor retardation, and may disorder characterized by recurrent inflammatory episodes and, in die in early childhood (1). most severe cases, by psychomotor delay. Defective synthesis of HIDS patients usually are treated with anti-inflammatory isoprenoids has been associated with the inflammatory phenotype drugs and in particular corticosteroids; thalidomide is also in these patients, but the molecular mechanisms involved are still used but its effect is limited (2). In most severe cases, patients poorly understood, and, so far, no specific therapy is available for may benefit from treatment with biologic agents such as this disorder. Drugs like aminobisphosphonates, which inhibit the etanercept and anakinra (1,3–5). No treatment has been mevalonate pathway causing a relative defect in isoprenoids proven effective in curing the neurological symptoms in se- synthesis, have been also associated to an inflammatory pheno- type. Recent data asserted that cell inflammation could be reversed vere cases of MKD.