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Revisiting the Phylogeny of Bombacoideae (Malvaceae)
Accepted Manuscript Revisiting the phylogeny of Bombacoideae (Malvaceae): Novel relationships, morphologically cohesive clades, and a new tribal classification based on mul- tilocus phylogenetic analyses Jefferson G. Carvalho-Sobrinho, William S. Alverson, Suzana Alcantara, Luciano P. de Queiroz, Aline C. da Mota, David A. Baum PII: S1055-7903(16)30087-2 DOI: http://dx.doi.org/10.1016/j.ympev.2016.05.006 Reference: YMPEV 5515 To appear in: Molecular Phylogenetics and Evolution Received Date: 21 May 2015 Revised Date: 21 April 2016 Accepted Date: 2 May 2016 Please cite this article as: Carvalho-Sobrinho, J.G., Alverson, W.S., Alcantara, S., de Queiroz, L.P., da Mota, A.C., Baum, D.A., Revisiting the phylogeny of Bombacoideae (Malvaceae): Novel relationships, morphologically cohesive clades, and a new tribal classification based on multilocus phylogenetic analyses, Molecular Phylogenetics and Evolution (2016), doi: http://dx.doi.org/10.1016/j.ympev.2016.05.006 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. Revisiting the phylogeny of Bombacoideae (Malvaceae): novel relationships, morphologically cohesive clades, and a new tribal classification based on multilocus phylogenetic analyses Jefferson G. Carvalho-Sobrinhoa,*, William S. Alversonb, Suzana Alcantarac, Luciano P. de Queirozd, Aline C. -
Lyonia 7(1) 2004 - Conservation of Biological and Cultural Diversity in the Andes and the Amazon Basin - Flora and Vegetation
Lyonia 7(1) 2004 - Conservation of Biological and Cultural Diversity in the Andes and the Amazon Basin - Flora and Vegetation Volume 7(1) December 2004 ISSN: 0888-9619 odd-right: 2 Introduction Scientists widely agree that species extinction has heavily accelerated in the last decades. The majority of the worlds species are found in tropical forests, covering a mere ten percent of the planets surface. A grave problem for the conservation of diversity is the still very fragmentary knowledge of the ecology of most species. The Andes and the Amazon Basin represent one of the most important Biodiversity-Hotspots on Earth. Attempts of sustainable management and conservation must integrate local communities and their traditional knowledge. Management decisions need to include the high importance of natural resources in providing building materials, food and medicines for rural as well as urbanized communities. The traditional use of forest resources, particularly of non-timber products like medicinal plants, has deep roots not only in indigenous communities, but is practiced in a wide section of society. The use of medicinal herbs is often an economically inevitable alternative to expensive western medicine. The base knowledge of this traditional use is passed from one generation to the next. Especially the medical use represents a highly dynamic, always evolving process, where new knowledge is constantly being obtained, and linked to traditional practices. An increased emphasis is being placed en possible economic benefits especially of the medicinal use of tropical forest products instead of pure timber harvesting, an approach particularly appealing to countries with difficult economic conditions. Most research efforts, due to lack of manpower, time end resources, focus only on either biodiversity assessments or ethnobotanical inventories, or try to implement management and use measures without having a sound scientific base to do so. -
Apiales, Aquifoliales, Boraginales, , Brassicales, Canellales
Kingdom: Plantae Phylum: Tracheophyta Class: Magnoliopsida Order: Apiales, Aquifoliales, Boraginales, , Brassicales, Canellales, Caryophyllales, Celastrales, Ericales, Fabales, Garryales, Gentianales, Lamiales, Laurales, Magnoliales, Malpighiales, Malvales, Myrtales, Oxalidales, Picramniales, Piperales, Proteales, Rosales, Santalales, Sapindales, Solanales Family: Achariaceae, Anacardiaceae, Annonaceae, Apocynaceae, Aquifoliaceae, Araliaceae, Bignoniaceae, Bixaceae, Boraginaceae, Burseraceae, Calophyllaceae, Canellaceae, Cannabaceae, Capparaceae, Cardiopteridaceae, Caricaceae, Caryocaraceae, Celastraceae, Chrysobalanaceae, Clusiaceae, Combretaceae, Dichapetalaceae, Ebenaceae, Elaeocarpaceae, Emmotaceae, Erythroxylaceae, Euphorbiaceae, Fabaceae, Goupiaceae, Hernandiaceae, Humiriaceae, Hypericaceae, Icacinaceae, Ixonanthaceae, Lacistemataceae, Lamiaceae, Lauraceae, Lecythidaceae, Lepidobotryaceae, Linaceae, Loganiaceae, Lythraceae, Malpighiaceae, Malvaceae, Melastomataceae, Meliaceae, Monimiaceae, Moraceae, Myristicaceae, Myrtaceae, Nyctaginaceae, Ochnaceae, Olacaceae, Oleaceae, Opiliaceae, Pentaphylacaceae, Phyllanthaceae, Picramniaceae, Piperaceae, Polygonaceae, Primulaceae, Proteaceae, Putranjivaceae, Rhabdodendraceae, Rhamnaceae, Rhizophoraceae, Rosaceae, Rubiaceae, Rutaceae, Sabiaceae, Salicaceae, Sapindaceae, Sapotaceae, Simaroubaceae, Siparunaceae, Solanaceae, Stemonuraceae, Styracaceae, Symplocaceae, Ulmaceae, Urticaceae, Verbenaceae, Violaceae, Vochysiaceae Genus: Abarema, Acioa, Acosmium, Agonandra, Aiouea, Albizia, Alchornea, -
Network Scan Data
Selbyana 15: 132-149 CHECKLIST OF VENEZUELAN BROMELIACEAE WITH NOTES ON SPECIES DISTRIBUTION BY STATE AND LEVELS OF ENDEMISM BRUCE K. HOLST Missouri Botanical Garden, P.O. Box 299, St. Louis, Missouri 63166-0299, USA ABSTRACf. A checklist of the 24 genera and 364 native species ofBromeliaceae known from Venezuela is presented, including their occurrence by state and indications of which are endemic to the country. A comparison of the number of genera and species known from Mesoamerica (southern Mexico to Panama), Colombia, Venezuela, the Guianas (Guyana, Suriname, French Guiana), Ecuador, and Peru is presented, as well as a summary of the number of species and endemic species in each Venezuelan state. RESUMEN. Se presenta un listado de los 24 generos y 364 especies nativas de Bromeliaceae que se conocen de Venezuela, junto con sus distribuciones por estado y una indicaci6n cuales son endemicas a Venezuela. Se presenta tambien una comparaci6n del numero de los generos y especies de Mesoamerica (sur de Mexico a Panama), Colombia, Venezuela, las Guayanas (Guyana, Suriname, Guyana Francesa), Ecuador, y Peru, y un resumen del numero de especies y numero de especies endemicas de cada estado de Venezuela. INTRODUCTION Bromeliaceae (Smith 1971), and Revision of the Guayana Highland Bromeliaceae (Smith 1986). The checklist ofVenezuelan Bromeliaceae pre Several additional country records were reported sented below (Appendix 1) adds three genera in works by Smith and Read (1982), Luther (Brewcaria, Neoregelia, and Steyerbromelia) and (1984), Morillo (1986), and Oliva-Esteva and 71 species to the totals for the country since the Steyermark (1987). Author abbreviations used last summary of Venezuelan bromeliads in the in the checklist follow Brummit and Powell Flora de Venezuela series which contained 293 (1992). -
Generic and Subtribal Relationships in Neotropical Cymbidieae (Orchidaceae) Based on Matk/Ycf1 Plastid Data
LANKESTERIANA 13(3): 375—392. 2014. I N V I T E D P A P E R* GENERIC AND SUBTRIBAL RELATIONSHIPS IN NEOTROPICAL CYMBIDIEAE (ORCHIDACEAE) BASED ON MATK/YCF1 PLASTID DATA W. MARK WHITTEN1,2, KURT M. NEUBIG1 & N. H. WILLIAMS1 1Florida Museum of Natural History, University of Florida Gainesville, FL 32611-7800 USA 2Corresponding author: [email protected] ABSTRACT. Relationships among all subtribes of Neotropical Cymbidieae (Orchidaceae) were estimated using combined matK/ycf1 plastid sequence data for 289 taxa. The matrix was analyzed using RAxML. Bootstrap (BS) analyses yield 100% BS support for all subtribes except Stanhopeinae (87%). Generic relationships within subtribes are highly resolved and are generally congruent with those presented in previous studies and as summarized in Genera Orchidacearum. Relationships among subtribes are largely unresolved. The Szlachetko generic classification of Maxillariinae is not supported. A new combination is made for Maxillaria cacaoensis J.T.Atwood in Camaridium. KEY WORDS: Orchidaceae, Cymbidieae, Maxillariinae, matK, ycf1, phylogenetics, Camaridium, Maxillaria cacaoensis, Vargasiella Cymbidieae include many of the showiest align nrITS sequences across the entire tribe was Neotropical epiphytic orchids and an unparalleled unrealistic due to high levels of sequence divergence, diversity in floral rewards and pollination systems. and instead to concentrate our efforts on assembling Many researchers have posed questions such as a larger plastid data set based on two regions (matK “How many times and when has male euglossine and ycf1) that are among the most variable plastid bee pollination evolved?”(Ramírez et al. 2011), or exon regions and can be aligned with minimal “How many times have oil-reward flowers evolved?” ambiguity across broad taxonomic spans. -
Lições Das Interações Planta – Beija-Flor
UNIVERSIDADE ESTADUAL DE CAMPINAS INSTITUTO DE BIOLOGIA JÉFERSON BUGONI REDES PLANTA-POLINIZADOR NOS TRÓPICOS: LIÇÕES DAS INTERAÇÕES PLANTA – BEIJA-FLOR PLANT-POLLINATOR NETWORKS IN THE TROPICS: LESSONS FROM HUMMINGBIRD-PLANT INTERACTIONS CAMPINAS 2017 JÉFERSON BUGONI REDES PLANTA-POLINIZADOR NOS TRÓPICOS: LIÇÕES DAS INTERAÇÕES PLANTA – BEIJA-FLOR PLANT-POLLINATOR NETWORKS IN THE TROPICS: LESSONS FROM HUMMINGBIRD-PLANT INTERACTIONS Tese apresentada ao Instituto de Biologia da Universidade Estadual de Campinas como parte dos requisitos exigidos para a obtenção do Título de Doutor em Ecologia. Thesis presented to the Institute of Biology of the University of Campinas in partial fulfillment of the requirements for the degree of Doctor in Ecology. ESTE ARQUIVO DIGITAL CORRESPONDE À VERSÃO FINAL DA TESE DEFENDIDA PELO ALUNO JÉFERSON BUGONI E ORIENTADA PELA DRA. MARLIES SAZIMA. Orientadora: MARLIES SAZIMA Co-Orientador: BO DALSGAARD CAMPINAS 2017 Campinas, 17 de fevereiro de 2017. COMISSÃO EXAMINADORA Profa. Dra. Marlies Sazima Prof. Dr. Felipe Wanderley Amorim Prof. Dr. Thomas Michael Lewinsohn Profa. Dra. Marina Wolowski Torres Prof. Dr. Vinícius Lourenço Garcia de Brito Os membros da Comissão Examinadora acima assinaram a Ata de Defesa, que se encontra no processo de vida acadêmica do aluno. DEDICATÓRIA À minha família por me ensinar o amor à natureza e a natureza do amor. Ao povo brasileiro por financiar meus estudos desde sempre, fomentando assim meus sonhos. EPÍGRAFE “Understanding patterns in terms of the processes that produce them is the essence of science […]” Levin, S.A. (1992). The problem of pattern and scale in ecology. Ecology 73:1943–1967. AGRADECIMENTOS Manifestar a gratidão às tantas pessoas que fizeram parte direta ou indiretamente do processo que culmina nesta tese não é tarefa trivial. -
Metabolitos Secundarios Obtenidos De La Familia Myristicaceae Que Producen Inhibición Enzimática Y Actividad Biológica
METABOLITOS SECUNDARIOS OBTENIDOS DE LA FAMILIA MYRISTICACEAE QUE PRODUCEN INHIBICIÓN ENZIMÁTICA Y ACTIVIDAD BIOLÓGICA Xiomara Alejandra Cabrera Martínez Universidad Nacional de Colombia Facultad de Ciencias, Departamento de Química Bogotá D.C. Colombia 2019 METABOLITOS SECUNDARIOS OBTENIDOS DE LA FAMILIA MYRISTICACEAE QUE PRODUCEN INHIBICIÓN ENZIMÁTICA Y ACTIVIDAD BIOLÓGICA Xiomara Alejandra Cabrera Martínez Tesis o trabajo de investigación presentada(o) como requisito parcial para optar al título de: Magister en Ciencias - Química Director: Qco. M.Sc. Dr. Sc. Luis Enrique Cuca Suarez Línea de Investigación: Química de Productos Naturales Grupo de Investigación: Estudio Químico y de Actividad Biológica de Rutaceae y Myristicaceae Colombianas Universidad Nacional de Colombia Facultad de Ciencias, Departamento de Química Bogotá D.C. Colombia 2019 Mi estrella que brilla en el cielo y guía mis caminos. Agradecimientos A Dios por la vida y permitirme vivir este proceso de formación. A toda mi familia por su apoyo, especialmente a mi padre. A mi director y profesor Luis Enrique Cuca Suárez quien me acepto en este proyecto, y en el grupo de Investigación. Gracias por su orientación, dedicación y sabiduría, por el tiempo y compromiso de asesoramiento en el desarrollo de este trabajo. A los profesores del grupo de investigación de productos naturales de la Universidad Nacional de Colombia por cada uno de sus aportes. A mis compañeras de maestría por sus colaboraciones. A la Universidad Nacional de Colombia por recibirme en sus aulas y permitirme lograr esta meta. Resumen y Abstract IX Resumen Diferentes especies de la familia Myristicaceae han sido utilizadas con fines medicinales, nutricionales e industriales, mostrando así la importancia y potencial de la familia en diversos campos. -
Evolution of Agroforestry As a Modern Science
Chapter 2 Evolution of Agroforestry as a Modern Science Jagdish C. Dagar and Vindhya P. Tewari Abstract Agroforestry is as old as agriculture itself. Many of the anecdotal agro- forestry practices, which are time tested and evolved through traditional indigenous knowledge, are still being followed in different agroecological zones. The tradi- tional knowledge and the underlying ecological principles concerning indigenous agroforestry systems around the world have been successfully used in designing the improved systems. Many of them such as improved fallows, homegardens, and park systems have evolved as modern agroforestry systems. During past four decades, agroforestry has come of age and begun to attract the attention of the international scientific community, primarily as a means for sustaining agricultural productivity in marginal lands and solving the second-generation problems such as secondary salinization due to waterlogging and contamination of water resources due to the use of excess nitrogen fertilizers and pesticides. Research efforts have shown that most of the degraded areas including saline, waterlogged, and perturbation ecolo- gies like mine spoils and coastal degraded mangrove areas can be made productive by adopting suitable agroforestry techniques involving highly remunerative compo- nents such as plantation-based farming systems, high-value medicinal and aromatic plants, livestock, fishery, poultry, forest and fruit trees, and vegetables. New con- cepts such as integrated farming systems and urban and peri-urban agroforestry have emerged. Consequently, the knowledge base of agroforestry is being expanded at a rapid pace as illustrated by the increasing number and quality of scientific pub- lications of various forms on different aspects of agroforestry. It is both a challenge and an opportunity to scientific community working in this interdisciplinary field. -
12. Plantas Y Líquenes Del Parque Nacional Natural De La Serranía De
PLANTAS Y LÍQUENES DEL PARQUE NACIONAL NATURAL SERRANÍA DE CHIRIBIQUETE, COLOMBIA Dairon Cárdenas1*1*,, MaríaMaría FernandaFernanda GonzálezGonzález12 ,, NóridaNórida MarínMarín11 y Sonia Sua11,, JulioJulio BetancurBetancur2 RESUMEN principales de formaciones vegetales registrados para la Guayana: bosques, matorrales, praderas o Se presenta el inventario de las plantas y los pastizales y la vegetación pionera sobre roca dura. líquenes del Parque Nacional Natural Serranía de En los afloramientos rocosos predominan especies Chiribiquete (PNNSCh), obtenido a través de como: Abolboda spp., Acanthella sprucei, Bonnetia información de herbarios y exploraciones de campo. sessilis, Calliandra vaupesiana, Clusia spp., Cyrilla Chiribiquete es el área protegida más grande de racemiflora, Decagonocarpus oppositifolius, Drosera Colombia, pertenece a la formación Guayana, esmeraldae, Euphronia hirtelloides, Gongylolepis tiene altitudes entre 200 y 800 metros y representa una gran meseta tectónica fraccionada por erosión martiana, Hevea nitida, Molongum lucidum, hídrica y disectada en numerosas mesas (tepuyes). Navia spp., Ochthocosmus berryi, Monotrema aemu- Se registraron 2,138 especies que corresponden lans, Pachira coriacea, Parahancornia surrogata, al 7.6 % de las encontradas en Colombia y al 66.5 Senefelderopsis chiribiquetensis, Steyerbromelia % de las de la región amazónica. Las familias con garcia-barrigae, Styrax rigidifolius, Tepuianthus más especies fueron: Fabaceae (184), Rubiaceae savannensis, Utricularia spp., Vellozia tubiflora (167) -
Chec List What Survived from the PLANAFLORO Project
Check List 10(1): 33–45, 2014 © 2014 Check List and Authors Chec List ISSN 1809-127X (available at www.checklist.org.br) Journal of species lists and distribution What survived from the PLANAFLORO Project: PECIES S Angiosperms of Rondônia State, Brazil OF 1* 2 ISTS L Samuel1 UniCarleialversity of Konstanz, and Narcísio Department C.of Biology, Bigio M842, PLZ 78457, Konstanz, Germany. [email protected] 2 Universidade Federal de Rondônia, Campus José Ribeiro Filho, BR 364, Km 9.5, CEP 76801-059. Porto Velho, RO, Brasil. * Corresponding author. E-mail: Abstract: The Rondônia Natural Resources Management Project (PLANAFLORO) was a strategic program developed in partnership between the Brazilian Government and The World Bank in 1992, with the purpose of stimulating the sustainable development and protection of the Amazon in the state of Rondônia. More than a decade after the PLANAFORO program concluded, the aim of the present work is to recover and share the information from the long-abandoned plant collections made during the project’s ecological-economic zoning phase. Most of the material analyzed was sterile, but the fertile voucher specimens recovered are listed here. The material examined represents 378 species in 234 genera and 76 families of angiosperms. Some 8 genera, 68 species, 3 subspecies and 1 variety are new records for Rondônia State. It is our intention that this information will stimulate future studies and contribute to a better understanding and more effective conservation of the plant diversity in the southwestern Amazon of Brazil. Introduction The PLANAFLORO Project funded botanical expeditions In early 1990, Brazilian Amazon was facing remarkably in different areas of the state to inventory arboreal plants high rates of forest conversion (Laurance et al. -
An Update on Ethnomedicines, Phytochemicals, Pharmacology, and Toxicity of the Myristicaceae Species
Received: 30 October 2020 Revised: 6 March 2021 Accepted: 9 March 2021 DOI: 10.1002/ptr.7098 REVIEW Nutmegs and wild nutmegs: An update on ethnomedicines, phytochemicals, pharmacology, and toxicity of the Myristicaceae species Rubi Barman1,2 | Pranjit Kumar Bora1,2 | Jadumoni Saikia1 | Phirose Kemprai1,2 | Siddhartha Proteem Saikia1,2 | Saikat Haldar1,2 | Dipanwita Banik1,2 1Agrotechnology and Rural Development Division, CSIR-North East Institute of Prized medicinal spice true nutmeg is obtained from Myristica fragrans Houtt. Rest spe- Science & Technology, Jorhat, 785006, Assam, cies of the family Myristicaceae are known as wild nutmegs. Nutmegs and wild nutmegs India 2Academy of Scientific and Innovative are a rich reservoir of bioactive molecules and used in traditional medicines of Europe, Research (AcSIR), Ghaziabad, 201002, Uttar Asia, Africa, America against madness, convulsion, cancer, skin infection, malaria, diar- Pradesh, India rhea, rheumatism, asthma, cough, cold, as stimulant, tonics, and psychotomimetic Correspondence agents. Nutmegs are cultivated around the tropics for high-value commercial spice, Dipanwita Banik, Agrotechnology and Rural Development Division, CSIR-North East used in global cuisine. A thorough literature survey of peer-reviewed publications, sci- Institute of Science & Technology, Jorhat, entific online databases, authentic webpages, and regulatory guidelines found major 785006, Assam, India. Email: [email protected] and phytochemicals namely, terpenes, fatty acids, phenylpropanoids, alkanes, lignans, flavo- [email protected] noids, coumarins, and indole alkaloids. Scientific names, synonyms were verified with Funding information www.theplantlist.org. Pharmacological evaluation of extracts and isolated biomarkers Council of Scientific and Industrial Research, showed cholinesterase inhibitory, anxiolytic, neuroprotective, anti-inflammatory, immu- Ministry of Science & Technology, Govt. -
Big Data Insights Into the Distribution and Evolution of Tropical Diversity
Big data insights into the distribution and evolution of tropical diversity Alexander Zizka 2018 Faculty of Science Department of Biological and Environmental Sciences Opponent: Prof. Jérôme Chave Examiner: Prof. Mari Källersjö Supervisors: Prof. Alexandre Antonelli & Assist. Prof. Christine D. Bacon c Alexander Zizka All rights reserved. No part of this publication may be reproduced or transmitted, in any form or by any means, without written permission. Zizka, A (2018): Big data insights into the distribution and evolution of tropical diversity. PhD thesis. Department of Biological and Environmental Sciences, University of Gothen- burg, Gothenburg, Sweden. Cover image: South American evergreen rainforest on the Guiana shield, with topology. View from an inselberg close to the Nouragues field station, French Guiana (4◦05’N, 52◦41’W). Copyright ISBN print: 978-91-88509-13-0 ISBN digital: 978-91-88509-14-7 Digital version available at http://hdl.handle.net/2077/55303 Printed by BrandFactory AB To my family Table of Contents Abstract Svensk sammanfattning Publications included 1 Introduction 3 Tropical biodiversity . .3 Biomes and biome shifts . .9 Big data - a new era in biogeography . 11 Objectives 17 Methods 19 Study groups . 19 Data sources . 19 Data analysis . 21 Results and Discussion 25 Conclusions 33 Paper contributions 35 References 37 Abbreviations 51 Acknowledgements 53 Abstract Tropical America (the Neotropics) and tropical Africa have comparable climate and share a geological history as parts of Gondwana. Nevertheless, the Neotropics today harbour roughly three times more flowering plant species than tropical Africa. The role of evolutio- nary history in generating this pattern remains poorly understood, mostly because collecting biological specimens in the tropics is difficult.