Natural Reward Drives the Advancement of Life
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The Ascidians of Tossa De Mar (NE Spain) II.- Biological Cycles of the Colonial Species
Cah. Biol. Mar. (1988),29: 407-418 Roscoff The ascidians of Tossa de Mar (NE Spain) II.- Biological cycles of the colonial species x. Turon Dep!. of Animal Biology (Vertebrates). Fac. of Biology. Univ. of Barcclona. Avgda. Diagonal, 645. 08028 Barcelona. Spain. Abstract : The ascidians from a locality on the Spanish NE coast were sampled from November 1984 until January 1986, with the aim of studying their biological cycles. Only the results conceming the co lonial species will be presented here. The samplings were performed twice a month, and the relative abundance, reproductivc statc and presence of resistance forms of the compound ascidian species were evaluated. Many species feature seasonal variations in abundance and even disappear from the samples in the unfavourable season. The reproductive periods are always restricted to a certain part of the year and they are strongly correlated with the biogeographical distribution of the species. The tempe rature ap pears as the main factor controlling ascidian reproduction. Notes are made on the significance of the resistance forms in the families Polyclinidae and Didemnidae. Résumé: Les ascidics présentes dans les fonds rocheux d'une localité de la côte NE espagnole ont été étudiées depuis novembrc 1984 jusqu'à janvier 1986, dans Ic but de préciser leurs cycles biologiques. Dans ce travail, seuls les résultats correspondant à des espèces coloniales seront présentés. L'abondance relative, les périodes de reproduction sexuée et la présence de formes de résistance ont été évaluées deux fois par mois pendant l'étude. Beaucoup d'espèces montrcnt des variations saisonnières d'abondance, et quelques-unes même dis paraissent pendant la saison défavorable. -
Lecture 20 - the History of Life on Earth
Lecture 20 - The History of Life on Earth Lecture 20 The History of Life on Earth Astronomy 141 – Autumn 2012 This lecture reviews the history of life on Earth. Rapid diversification of anaerobic prokaryotes during the Proterozoic Eon Emergence of Photosynthesis and the rise of O2 in the Earth’s atmosphere. Rise of Eukaryotes and the Cambrian Explosion in biodiversity at the start of the Phanerozoic Eon Colonization of land first by plants, then by animals Emergence of primates, then hominids, then humans. A brief digression on notation: “ya” = “years ago” Introduce a simple compact notation for writing the length of time before the present day. For example: “3.5 Billion years ago” “454 Million years ago” Gya = “giga-years ago”, hence 3.5 Gya = 3.5 Billion years ago Mya = “mega-years ago”, hence 454 Mya = 454 Million years ago [Note: some sources use Ga and Ma] Astronomy 141 - Winter 2012 1 Lecture 20 - The History of Life on Earth The four Eons of geological time. Hadean: 4.5 – 3.8 Gya: Formation, oceans & atmosphere Archaean: 3.8 – 2.5 Gya: Stromatolites & fossil bacteria Proterozoic: 2.5 Gya – 454 Mya: Eukarya and Oxygen Phanerozoic: since 454 Mya: Rise of plant and animal life The Archaean Eon began with the end of heavy bombardment ~3.8 Gya. Conditions stabilized. Oceans, but no O2 in the atmosphere. Stromatolites appear in the geological record ~3.5 Gya and thrived for >1 Billion years Rise of anaerobic microbes in the deep ocean & shores using Chemosynthesis. Time of rapid diversification of life driven by Natural Selection. -
Chapter 22 Notes: Introduction to Evolution
NOTES: Ch 22 – Descent With Modification – A Darwinian View of Life Our planet is home to a huge variety of organisms! (Scientists estimate of organisms alive today!) Even more amazing is evidence of organisms that once lived on earth, but are now . Several hundred million species have come and gone during 4.5 billion years life is believed to have existed on earth So…where have they gone… why have they disappeared? EVOLUTION: the process by which have descended from . Central Idea: organisms alive today have been produced by a long process of . FITNESS: refers to traits and behaviors of organisms that enable them to survive and reproduce COMMON DESCENT: species ADAPTATION: any inherited characteristic that enhances an organism’s ability to ~based on variations that are HOW DO WE KNOW THAT EVOLUTION HAS OCCURRED (and is still happening!!!)??? Lines of evidence: 1) So many species! -at least (250,000 beetles!) 2) ADAPTATIONS ● Structural adaptations - - ● Physiological adaptations -change in - to certain toxins 3) Biogeography: - - and -Examples: 13 species of finches on the 13 Galapagos Islands -57 species of Kangaroos…all in Australia 4) Age of Earth: -Rates of motion of tectonic plates - 5) FOSSILS: -Evidence of (shells, casts, bones, teeth, imprints) -Show a -We see progressive changes based on the order they were buried in sedimentary rock: *Few many fossils / species * 6) Applied Genetics: “Artificial Selection” - (cattle, dogs, cats) -insecticide-resistant insects - 7) Homologies: resulting from common ancestry Anatomical Homologies: ● comparative anatomy reveals HOMOLOGOUS STRUCTURES ( , different functions) -EX: ! Vestigial Organs: -“Leftovers” from the evolutionary past -Structures that Embryological Homologies: ● similarities evident in Molecular/Biochemical Homologies: ● DNA is the “universal” genetic code or code of life ● Proteins ( ) Darwin & the Scientists of his time Introduction to Darwin… ● On November 24, 1859, Charles Darwin published On the Origin of Species by Means of Natural Selection. -
Timeline of the Evolutionary History of Life
Timeline of the evolutionary history of life This timeline of the evolutionary history of life represents the current scientific theory Life timeline Ice Ages outlining the major events during the 0 — Primates Quater nary Flowers ←Earliest apes development of life on planet Earth. In P Birds h Mammals – Plants Dinosaurs biology, evolution is any change across Karo o a n ← Andean Tetrapoda successive generations in the heritable -50 0 — e Arthropods Molluscs r ←Cambrian explosion characteristics of biological populations. o ← Cryoge nian Ediacara biota – z ← Evolutionary processes give rise to diversity o Earliest animals ←Earliest plants at every level of biological organization, i Multicellular -1000 — c from kingdoms to species, and individual life ←Sexual reproduction organisms and molecules, such as DNA and – P proteins. The similarities between all present r -1500 — o day organisms indicate the presence of a t – e common ancestor from which all known r Eukaryotes o species, living and extinct, have diverged -2000 — z o through the process of evolution. More than i Huron ian – c 99 percent of all species, amounting to over ←Oxygen crisis [1] five billion species, that ever lived on -2500 — ←Atmospheric oxygen Earth are estimated to be extinct.[2][3] Estimates on the number of Earth's current – Photosynthesis Pong ola species range from 10 million to 14 -3000 — A million,[4] of which about 1.2 million have r c been documented and over 86 percent have – h [5] e not yet been described. However, a May a -3500 — n ←Earliest oxygen 2016 -
Plant Evolution an Introduction to the History of Life
Plant Evolution An Introduction to the History of Life KARL J. NIKLAS The University of Chicago Press Chicago and London CONTENTS Preface vii Introduction 1 1 Origins and Early Events 29 2 The Invasion of Land and Air 93 3 Population Genetics, Adaptation, and Evolution 153 4 Development and Evolution 217 5 Speciation and Microevolution 271 6 Macroevolution 325 7 The Evolution of Multicellularity 377 8 Biophysics and Evolution 431 9 Ecology and Evolution 483 Glossary 537 Index 547 v Introduction The unpredictable and the predetermined unfold together to make everything the way it is. It’s how nature creates itself, on every scale, the snowflake and the snowstorm. — TOM STOPPARD, Arcadia, Act 1, Scene 4 (1993) Much has been written about evolution from the perspective of the history and biology of animals, but significantly less has been writ- ten about the evolutionary biology of plants. Zoocentricism in the biological literature is understandable to some extent because we are after all animals and not plants and because our self- interest is not entirely egotistical, since no biologist can deny the fact that animals have played significant and important roles as the actors on the stage of evolution come and go. The nearly romantic fascination with di- nosaurs and what caused their extinction is understandable, even though we should be equally fascinated with the monarchs of the Carboniferous, the tree lycopods and calamites, and with what caused their extinction (fig. 0.1). Yet, it must be understood that plants are as fascinating as animals, and that they are just as important to the study of biology in general and to understanding evolutionary theory in particular. -
Interpreting the History of Evolutionary Biology Through a Kuhnian Prism: Sense Or Nonsense?
Interpreting the History of Evolutionary Biology through a Kuhnian Prism: Sense or Nonsense? Koen B. Tanghe Department of Philosophy and Moral Sciences, Universiteit Gent, Belgium Lieven Pauwels Department of Criminology, Criminal Law and Social Law, Universiteit Gent, Belgium Alexis De Tiège Department of Philosophy and Moral Sciences, Universiteit Gent, Belgium Johan Braeckman Department of Philosophy and Moral Sciences, Universiteit Gent, Belgium Traditionally, Thomas S. Kuhn’s The Structure of Scientific Revolutions (1962) is largely identified with his analysis of the structure of scientific revo- lutions. Here, we contribute to a minority tradition in the Kuhn literature by interpreting the history of evolutionary biology through the prism of the entire historical developmental model of sciences that he elaborates in The Structure. This research not only reveals a certain match between this model and the history of evolutionary biology but, more importantly, also sheds new light on several episodes in that history, and particularly on the publication of Charles Darwin’s On the Origin of Species (1859), the construction of the modern evolutionary synthesis, the chronic discontent with it, and the latest expression of that discon- tent, called the extended evolutionary synthesis. Lastly, we also explain why this kind of analysis hasn’t been done before. We would like to thank two anonymous reviewers for their constructive review, as well as the editor Alex Levine. Perspectives on Science 2021, vol. 29, no. 1 © 2021 by The Massachusetts Institute of Technology https://doi.org/10.1162/posc_a_00359 1 Downloaded from http://www.mitpressjournals.org/doi/pdf/10.1162/posc_a_00359 by guest on 30 September 2021 2 Evolutionary Biology through a Kuhnian Prism 1. -
Natural Necessity Natural Selection
NATURAL SELECTION NATURAL NECESSITY See Laws of Nature NATURAL SELECTION In modern evolutionary biology, a set of objects is Adaptationism said to experience a selection process precisely when At the close of his introduction to those objects vary in/itness (see Fitness). For exam On the Origin oj' ple, if zebras that run fast are fitter than zehras that Species, Darwin [1859] 1964, 6 says that natural selection is "the main but not the exclusive" cause run slow (perhaps because faster zebras are better ofevolution. In reaction to misinterpretations ofhis able to avoid lion predation), a selection process is theory, Darwin felt compelled to reemphasize, in the set in motion. If the trait that exhibits variation hook's last edition, that there was more to evolution in fit~ess is heritable-meaning, in our example, that faster parents tend to have faster offspring than natural selection. It remains a matter of con troversy in evolutionary biology how important and slower parents tend to have slower offspring then the selection process is apt to chancre trait natural selection has been in the history of life. frequencies in the population, leading fitte';. traits This is the poinl of biological substance that pres to increase in frequency and less fit traits to decline ently divides adaptationists and anti-adaptationists. The debate over adaptationism also has a separate (Lewontin 1970). This change is the one that selec tion is "apt" to engender, rather than the one that methodological dimension, with critics insisting that adaptive hypotheses be tested more rigorously must occur, because evolutionary theory describes <Gould and Lewontin 1979; Sober 1993). -
Revisiting the Eclipse of Darwinism
Journal of the History of Biology (2005) 38: 19–32 Ó Springer 2005 DOI: 10.1007/s10739-004-6507-0 Revisiting the Eclipse of Darwinism PETER J. BOWLER School of Anthropological Studies Queen’s University Belfast BT7 1NN Northern Ireland UK E-mail: [email protected] Abstract. The article sums up a number of points made by the author concerning the response to Darwinism in the late nineteenth and early twentieth centuries, and repeats the claim that a proper understanding of the theory’s impact must take account of the extent to which what are now regarded as the key aspects of Darwin’s thinking were evaded by his immediate followers. Potential challenges to this position are described and responded to. Keywords: anti-Darwinism, Darwinism, eclipse of Darwinism Having written books with titles such as The Eclipse of Darwinism and The Non-Darwinian Revolution, I could hardly resist the offer to produce an overview of my current thinking on the status of the Darwinian revolution. My ideas have certainly developed over the years, but in a reasonably consistent manner. Each book has, in a sense, created the question that had to be answered in the next. The initial purpose was only to document the temporary explosion of interest in non-Darwinian ideas of evolutionism in the late nineteenth century. But once it became apparent that even some ostensible supporters of Darwinism adopted positions that would never be included under that name today, it be- came necessary to rethink the relationship between early and modern Darwinism, and to reassess why Darwin’s work was taken so seriously when it was first published. -
Halocynthia Roretzi
Sekigami et al. Zoological Letters (2017) 3:17 DOI 10.1186/s40851-017-0078-3 RESEARCH ARTICLE Open Access Hox gene cluster of the ascidian, Halocynthia roretzi, reveals multiple ancient steps of cluster disintegration during ascidian evolution Yuka Sekigami1, Takuya Kobayashi1, Ai Omi1, Koki Nishitsuji2, Tetsuro Ikuta1, Asao Fujiyama3, Noriyuki Satoh2 and Hidetoshi Saiga1* Abstract Background: Hox gene clusters with at least 13 paralog group (PG) members are common in vertebrate genomes and in that of amphioxus. Ascidians, which belong to the subphylum Tunicata (Urochordata), are phylogenetically positioned between vertebrates and amphioxus, and traditionally divided into two groups: the Pleurogona and the Enterogona. An enterogonan ascidian, Ciona intestinalis (Ci), possesses nine Hox genes localized on two chromosomes; thus, the Hox gene cluster is disintegrated. We investigated the Hox gene cluster of a pleurogonan ascidian, Halocynthia roretzi (Hr) to investigate whether Hox gene cluster disintegration is common among ascidians, and if so, how such disintegration occurred during ascidian or tunicate evolution. Results: Our phylogenetic analysis reveals that the Hr Hox gene complement comprises nine members, including one with a relatively divergent Hox homeodomain sequence. Eight of nine Hr Hox genes were orthologous to Ci-Hox1, 2, 3, 4, 5, 10, 12 and 13. Following the phylogenetic classification into 13 PGs, we designated Hr Hox genes as Hox1, 2, 3, 4, 5, 10, 11/12/13.a, 11/12/13.b and HoxX. To address the chromosomal arrangement of the nine Hox genes, we performed two-color chromosomal fluorescent in situ hybridization, which revealed that the nine Hox genes are localized on a single chromosome in Hr, distinct from their arrangement in Ci. -
1471-2148-9-187.Pdf
BMC Evolutionary Biology BioMed Central Research article Open Access An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models Georgia Tsagkogeorga1,2, Xavier Turon3, Russell R Hopcroft4, Marie- Ka Tilak1,2, Tamar Feldstein5, Noa Shenkar5,6, Yossi Loya5, Dorothée Huchon5, Emmanuel JP Douzery1,2 and Frédéric Delsuc*1,2 Address: 1Université Montpellier 2, Institut des Sciences de l'Evolution (UMR 5554), CC064, Place Eugène Bataillon, 34095 Montpellier Cedex 05, France, 2CNRS, Institut des Sciences de l'Evolution (UMR 5554), CC064, Place Eugène Bataillon, 34095 Montpellier Cedex 05, France, 3Centre d'Estudis Avançats de Blanes (CEAB, CSIC), Accés Cala S. Francesc 14, 17300 Blanes (Girona), Spain, 4Institute of Marine Science, University of Alaska Fairbanks, Fairbanks, Alaska, USA, 5Department of Zoology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, 69978, Israel and 6Department of Biology, University of Washington, Seattle WA 98195, USA Email: Georgia Tsagkogeorga - [email protected]; Xavier Turon - [email protected]; Russell R Hopcroft - [email protected]; Marie-Ka Tilak - [email protected]; Tamar Feldstein - [email protected]; Noa Shenkar - [email protected]; Yossi Loya - [email protected]; Dorothée Huchon - [email protected]; Emmanuel JP Douzery - [email protected]; Frédéric Delsuc* - [email protected] * Corresponding author Published: 5 August 2009 Received: 16 October 2008 Accepted: 5 August 2009 BMC Evolutionary Biology 2009, 9:187 doi:10.1186/1471-2148-9-187 This article is available from: http://www.biomedcentral.com/1471-2148/9/187 © 2009 Tsagkogeorga et al; licensee BioMed Central Ltd. -
A Qunanitative Evaluation of Morphological Changes During Fusion Events in a Colony of Didemnum Vexillum and of Polycunum Constellatum
University of New Hampshire University of New Hampshire Scholars' Repository Master's Theses and Capstones Student Scholarship Spring 2012 A QUNANITATIVE EVALUATION OF MORPHOLOGICAL CHANGES DURING FUSION EVENTS IN A COLONY OF DIDEMNUM VEXILLUM AND OF POLYCUNUM CONSTELLATUM Andrea Frey University of New Hampshire, Durham Follow this and additional works at: https://scholars.unh.edu/thesis Recommended Citation Frey, Andrea, "A QUNANITATIVE EVALUATION OF MORPHOLOGICAL CHANGES DURING FUSION EVENTS IN A COLONY OF DIDEMNUM VEXILLUM AND OF POLYCUNUM CONSTELLATUM" (2012). Master's Theses and Capstones. 716. https://scholars.unh.edu/thesis/716 This Thesis is brought to you for free and open access by the Student Scholarship at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in Master's Theses and Capstones by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. A QUNANITATIVE EVALUATION OF MORPHOLOGICAL CHANGES DURING FUSION EVENTS IN A COLONY OF DIDEMNUM VEXILLUM AND OF POLYCUNUM CONSTELLATUM BY Andrea Frey BA, Mount Holyoke College, 2005 THESIS Submitted to the University of New Hampshire in Partial Fulfillment of the Requirements for the Degree of Master of Science in Natural Resources: Environmental Conservation May, 2012 UMI Number: 1518022 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. -
De Novo Draft Assembly of the Botrylloides Leachii Genome
bioRxiv preprint doi: https://doi.org/10.1101/152983; this version posted June 21, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 De novo draft assembly of the Botrylloides leachii genome 2 provides further insight into tunicate evolution. 3 4 Simon Blanchoud1#, Kim Rutherford2, Lisa Zondag1, Neil Gemmell2 and Megan J Wilson1* 5 6 1 Developmental Biology and Genomics Laboratory 7 2 8 Department of Anatomy, School of Biomedical Sciences, University of Otago, P.O. Box 56, 9 Dunedin 9054, New Zealand 10 # Current address: Department of Zoology, University of Fribourg, Switzerland 11 12 * Corresponding author: 13 Email: [email protected] 14 Ph. +64 3 4704695 15 Fax: +64 479 7254 16 17 Keywords: chordate, regeneration, Botrylloides leachii, ascidian, tunicate, genome, evolution 1 bioRxiv preprint doi: https://doi.org/10.1101/152983; this version posted June 21, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 18 Abstract (250 words) 19 Tunicates are marine invertebrates that compose the closest phylogenetic group to the 20 vertebrates. This chordate subphylum contains a particularly diverse range of reproductive 21 methods, regenerative abilities and life-history strategies. Consequently, tunicates provide an 22 extraordinary perspective into the emergence and diversity of chordate traits. Currently 23 published tunicate genomes include three Phlebobranchiae, one Thaliacean, one Larvacean 24 and one Stolidobranchian. To gain further insights into the evolution of the tunicate phylum, 25 we have sequenced the genome of the colonial Stolidobranchian Botrylloides leachii.