Table 1 List of SCBV and BSV Isolates Used in This Study

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Table 1 List of SCBV and BSV Isolates Used in This Study

Table S1. Descriptors of Sugarcane bacilliform virus (SCBV) isolates analyzed in this study. Isolates SCBV-CHN1 and SCBV-CHN2 were derived in this study while the remaining 24 SCBV isolates represent global virus isolates obtained from the GenBank. Sequences of Commelina yellow mottle virus (ComYMV) were also included in the analyses as an outgroup

Virus isolate Groupa Host (Genus) Variety Country Accession no. Reference SCBV-CHN1 SCBV-H Saccharum hybrid ROC27 China KM214357 In this study SCBV-CHN2 SCBV-G Saccharum hybrid CZ66-70 China KM214358 In this study SCBMOV-MOR SCBV-E Saccharum hybrid Mex57-473 USA NC_008017 Bouhida et al.,1993 SCBIMV-QLD SCBV-F Saccharum hybrid Ireng Maleng Australia NC_003031 Geijskes et al., 2002 SCBGAV-R570 SCBV-A Saccharum hybrid R570 Guadeloupe FJ824813 Muller et al., 2011 SCBGAV-B51129 SCBV-A Saccharum hybrid B51129 Guadeloupe FJ824814 Muller et al., 2011 SCBGDV-Batavia SCBV-D S. officinarum Batavia Guadeloupe FJ439817 Muller et al., 2011 SCBV-BO91 SCBV-J Saccharum hybrid BO 91 India JN377533 Karuppaiah et al., 2013 SCBV-Iscam SCBV-E S. officinarum Iscambine India JN377534 Karuppaiah et al., 2013 SCBV-BB SCBV-H S. officinarum Boetatoe Bilatoe India JN377535 Karuppaiah et al., 2013 SCBV-BT SCBV-K S. officinarum Black Tanna India JN377536 Karuppaiah et al., 2013 SCBV-BRU SCBV-I S. officinarum Black Reunion India JN377537 Karuppaiah et al., 2013 SCBV-UP SCBV-J S. officinarum CoSe6460 India KC013277 Rao et al., 2014 SCBV-UP SCBV-J S. officinarum Co1424 India KC013276 Rao et al., 2014 SCBV-UP SCBV-M S. officinarum CoSe92423 India HQ324247 Rao et al., 2014 SCBV-Bihar SCBV-J Saccharum hybrid BO 141 India HQ324245 Rao et al., 2014 SCBV-AP SCBV-L S. officinarum Co693077 India HQ324248 Rao et al., 2014 SCBV-Assam SCBV-L S. officinarum CoBIN94063 India HQ324246 Rao et al., 2014 SCBV-Kerela SCBV-M S. officinarum Co7219 India HQ324249 Rao et al., 2014 SCBV-TN SCBV-M S. officinarum Co86032 India GQ385038 Rao et al., 2014 SCBV-Ba33 SCBV-G S. officinarum Batavia Guadeloupe FJ439788 Muller et al., 2011 SCBV-Aiwa2 SCBV-C S. officinarum Aïwa Guadeloupe FJ439784 Muller et al., 2011 SCBV-CB9 SCBV-C S. officinarum Canne Blanche Guadeloupe FJ439796 Muller et al., 2011 SCBV-FR90306- SCBV-A Saccharum hybrid FR90306 Guadeloupe FJ439811 Muller et al., 2011 129 SCBV-A Saccharum hybrid B51129 Guadeloupe FJ439801 Muller et al., 2011 SCBV-B51129-3 SCBV-Ba14 SCBV-B S. officinarum Batavia Guadeloupe FJ439787 Muller et al., 2011 ComYMV-GU ComYMV Commelina Guadeloupe NC_001343 Medberry et al., 1990 a Virus species in bold were proposed in this study References Bouhida, M., Lockhart, B. E. L., & Olszewski, N. E. (1993). An analysis of the complete sequence of a sugarcane bacilliform virus genome infectious to

banana and rice. Journal of General Virology, 74, 15–22. Geijskes, R. J., Braithwaite, K. S., Dale, J. L., Harding, R.M., & Smith, G. R. (2002). Sequence analysis of an Australian isolate of sugarcane

bacilliform badnavirus. Archives of Virology, 147, 2393–2404. Muller, E., Dupuy, V., Blondin, L., Bauffe, F., Daugrois, J. H., Nathalie, L., & Iskra-Caruana, M. L. (2011) High molecular variability of sugarcane

bacilliform viruses in Guadeloupe implying the existence of at least three new species. Virus Research 160, 414–419. Karuppaiah, R., Viswanathan, R., & Kumar, V. G. (2013). Genetic diversity of Sugarcane bacilliform virus isolates infecting Saccharum spp. in India.

Virus Genes 46, 505–516. Medberry, S. L., Lockhart, B. E. L., & Olszewski, N. E. (1990). Properties of Commelina yellow mottle virus's complete DNA sequence, genomic

discontinuities and transcript suggest that it is a pararetrovirus. Nucleic acids Research, 18, 5505–5513. Rao, G. P., Sharma, S. K., Singh, D., Arya, M., Singh, P., & Baranwal, V. K. (2014). Genetically diverse variants of Sugarcane bacilliform virus

infecting sugarcane in India and evidence of a novel Recombinant badnavirus variant. Journal of Phytopathology, 162, 779–787.

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