Principles of Crustacean Taxonomy
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A Classification of Living and Fossil Genera of Decapod Crustaceans
RAFFLES BULLETIN OF ZOOLOGY 2009 Supplement No. 21: 1–109 Date of Publication: 15 Sep.2009 © National University of Singapore A CLASSIFICATION OF LIVING AND FOSSIL GENERA OF DECAPOD CRUSTACEANS Sammy De Grave1, N. Dean Pentcheff 2, Shane T. Ahyong3, Tin-Yam Chan4, Keith A. Crandall5, Peter C. Dworschak6, Darryl L. Felder7, Rodney M. Feldmann8, Charles H. J. M. Fransen9, Laura Y. D. Goulding1, Rafael Lemaitre10, Martyn E. Y. Low11, Joel W. Martin2, Peter K. L. Ng11, Carrie E. Schweitzer12, S. H. Tan11, Dale Tshudy13, Regina Wetzer2 1Oxford University Museum of Natural History, Parks Road, Oxford, OX1 3PW, United Kingdom [email protected] [email protected] 2Natural History Museum of Los Angeles County, 900 Exposition Blvd., Los Angeles, CA 90007 United States of America [email protected] [email protected] [email protected] 3Marine Biodiversity and Biosecurity, NIWA, Private Bag 14901, Kilbirnie Wellington, New Zealand [email protected] 4Institute of Marine Biology, National Taiwan Ocean University, Keelung 20224, Taiwan, Republic of China [email protected] 5Department of Biology and Monte L. Bean Life Science Museum, Brigham Young University, Provo, UT 84602 United States of America [email protected] 6Dritte Zoologische Abteilung, Naturhistorisches Museum, Wien, Austria [email protected] 7Department of Biology, University of Louisiana, Lafayette, LA 70504 United States of America [email protected] 8Department of Geology, Kent State University, Kent, OH 44242 United States of America [email protected] 9Nationaal Natuurhistorisch Museum, P. O. Box 9517, 2300 RA Leiden, The Netherlands [email protected] 10Invertebrate Zoology, Smithsonian Institution, National Museum of Natural History, 10th and Constitution Avenue, Washington, DC 20560 United States of America [email protected] 11Department of Biological Sciences, National University of Singapore, Science Drive 4, Singapore 117543 [email protected] [email protected] [email protected] 12Department of Geology, Kent State University Stark Campus, 6000 Frank Ave. -
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Contributions to Zoology, 67 (4) 223-235 (1998) SPB Academic Publishing bv, Amsterdam Optics and phylogeny: is there an insight? The evolution of superposition eyes in the Decapoda (Crustacea) Edward Gaten Department of Biology, University’ ofLeicester, Leicester LEI 7RH, U.K. E-mail: [email protected] Keywords: Compound eyes, superposition optics, adaptation, evolution, decapod crustaceans, phylogeny Abstract cannot normally be predicted by external exami- nation alone, and usually microscopic investiga- This addresses the of structure and in paper use eye optics the tion of properly fixed optical elements is required construction of and crustacean phylogenies presents an hypoth- for a complete diagnosis. This largely rules out esis for the evolution of in the superposition eyes Decapoda, the use of fossil material in the based the of in comparatively on distribution eye types extant decapod fami- few lies. It that arthropodan specimens where the are is suggested reflecting superposition optics are eyes symplesiomorphic for the Decapoda, having evolved only preserved (Glaessner, 1969), although the optics once, probably in the Devonian. loss of Subsequent reflecting of some species of trilobite have been described has superposition optics occurred following the adoption of a (Clarkson & Levi-Setti, 1975). Also the require- new habitat (e.g. Aristeidae,Aeglidae) or by progenetic paedo- ment for good fixation and the fact that complete morphosis (Paguroidea, Eubrachyura). examination invariably involves the destruction of the specimen means that museum collections Introduction rarely reveal enough information to define the optics unequivocally. Where the optics of the The is one of the compound eye most complex component parts of the eye are under investiga- and remarkable not on of its fixation organs, only account tion, specialised to preserve the refrac- but also for the optical precision, diversity of tive properties must be used (Oaten, 1994). -
Evolutionary History of Inversions in the Direction of Architecture-Driven
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Evolutionary history of inversions in the direction of architecture- driven mutational pressures in crustacean mitochondrial genomes Dong Zhang1,2, Hong Zou1, Jin Zhang3, Gui-Tang Wang1,2*, Ivan Jakovlić3* 1 Key Laboratory of Aquaculture Disease Control, Ministry of Agriculture, and State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China. 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 Bio-Transduction Lab, Wuhan 430075, China * Corresponding authors Short title: Evolutionary history of ORI events in crustaceans Abbreviations: CR: control region, RO: replication of origin, ROI: inversion of the replication of origin, D-I skew: double-inverted skew, LBA: long-branch attraction bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Inversions of the origin of replication (ORI) of mitochondrial genomes produce asymmetrical mutational pressures that can cause artefactual clustering in phylogenetic analyses. It is therefore an absolute prerequisite for all molecular evolution studies that use mitochondrial data to account for ORI events in the evolutionary history of their dataset. -
Decapod Crustacean Phylogenetics
CRUSTACEAN ISSUES ] 3 II %. m Decapod Crustacean Phylogenetics edited by Joel W. Martin, Keith A. Crandall, and Darryl L. Felder £\ CRC Press J Taylor & Francis Group Decapod Crustacean Phylogenetics Edited by Joel W. Martin Natural History Museum of L. A. County Los Angeles, California, U.S.A. KeithA.Crandall Brigham Young University Provo,Utah,U.S.A. Darryl L. Felder University of Louisiana Lafayette, Louisiana, U. S. A. CRC Press is an imprint of the Taylor & Francis Croup, an informa business CRC Press Taylor & Francis Group 6000 Broken Sound Parkway NW, Suite 300 Boca Raton, Fl. 33487 2742 <r) 2009 by Taylor & Francis Group, I.I.G CRC Press is an imprint of 'Taylor & Francis Group, an In forma business No claim to original U.S. Government works Printed in the United States of America on acid-free paper 109 8765 43 21 International Standard Book Number-13: 978-1-4200-9258-5 (Hardcover) Ibis book contains information obtained from authentic and highly regarded sources. Reasonable efforts have been made to publish reliable data and information, but the author and publisher cannot assume responsibility for the valid ity of all materials or the consequences of their use. The authors and publishers have attempted to trace the copyright holders of all material reproduced in this publication and apologize to copyright holders if permission to publish in this form has not been obtained. If any copyright material has not been acknowledged please write and let us know so we may rectify in any future reprint. Except as permitted under U.S. Copyright Faw, no part of this book maybe reprinted, reproduced, transmitted, or uti lized in any form by any electronic, mechanical, or other means, now known or hereafter invented, including photocopy ing, microfilming, and recording, or in any information storage or retrieval system, without written permission from the publishers. -
Crustacea, Decapoda, Dendrobranchiata and Caridea) from Off Northeastern Japan
Bull. Natl. Mus. Nat. Sci., Ser. A, 42(1), pp. 23–48, February 22, 2016 Additional Records of Deep-water Shrimps (Crustacea, Decapoda, Dendrobranchiata and Caridea) from off Northeastern Japan Tomoyuki Komai1 and Hironori Komatsu2 1 Natural History Museum and Institute, Chiba, 955–2 Aoba-cho, Chiba 260–8682, Japan E-mail: [email protected] 2 Department of Zoology, National Museum of Nature and Science, 4–1–1 Amakubo, Tsukuba, Ibaraki 305–0005, Japan E-mail: [email protected] (Received 5 October 2015; accepted 22 December 2015) Abstract Four deep-water species of shrimps are newly recorded from off Tohoku District, northeastern Japan: Hepomadus gracialis Spence Bate, 1888 (Dendrobranchiata, Aristeidae), Pasiphaea exilimanus Komai, Lin and Chan, 2012 (Caridea, Pasiphaeidae), Nematocarcinus longirostris Spence Bate, 1888 (Caridea, Nematocarcinidae), and Glyphocrangon caecescens Anonymous, 1891 (Caridea, Glyphocrangonidae). Of them, the bathypelagic P. exilimanus is new to the Japanese fauna. The other three species are abyssobenthic, extending to depths greater than 3000 m, and thus have been rarely collected. The newly collected samples of H. gracialis enable us to reassess diagnostic characters of the species. Nematocarcinus longirostris is rediscovered since the original description, and the taxonomy of the species is reviewed. Glyphocrangon caecescens is the sole representative of the family extending to off northern Japan. Key words : Hepomadus gracialis, Pasiphaea exilimanus, Nematocarcinus longirostris, Glypho- crangon caecescens, -
Annotated Checklist of New Zealand Decapoda (Arthropoda: Crustacea)
Tuhinga 22: 171–272 Copyright © Museum of New Zealand Te Papa Tongarewa (2011) Annotated checklist of New Zealand Decapoda (Arthropoda: Crustacea) John C. Yaldwyn† and W. Richard Webber* † Research Associate, Museum of New Zealand Te Papa Tongarewa. Deceased October 2005 * Museum of New Zealand Te Papa Tongarewa, PO Box 467, Wellington, New Zealand ([email protected]) (Manuscript completed for publication by second author) ABSTRACT: A checklist of the Recent Decapoda (shrimps, prawns, lobsters, crayfish and crabs) of the New Zealand region is given. It includes 488 named species in 90 families, with 153 (31%) of the species considered endemic. References to New Zealand records and other significant references are given for all species previously recorded from New Zealand. The location of New Zealand material is given for a number of species first recorded in the New Zealand Inventory of Biodiversity but with no further data. Information on geographical distribution, habitat range and, in some cases, depth range and colour are given for each species. KEYWORDS: Decapoda, New Zealand, checklist, annotated checklist, shrimp, prawn, lobster, crab. Contents Introduction Methods Checklist of New Zealand Decapoda Suborder DENDROBRANCHIATA Bate, 1888 ..................................... 178 Superfamily PENAEOIDEA Rafinesque, 1815.............................. 178 Family ARISTEIDAE Wood-Mason & Alcock, 1891..................... 178 Family BENTHESICYMIDAE Wood-Mason & Alcock, 1891 .......... 180 Family PENAEIDAE Rafinesque, 1815 .................................. -
Distribution of the Planktonic Shrimp Lucifer (Thompson, 1829)
http://dx.doi.org/10.1590/1519-6984.20612 Original Article Distribution of the Planktonic Shrimp Lucifer (Thompson, 1829) (Decapoda, Sergestoidea) off the Amazon Melo, NFAC.a*, Neumann-Leitão, S.b, Gusmão, LMO.b, Martins-Neto, FE.a and Palheta, GDA.a aPrograma de Pós-graduação em Aquicultura e Recursos Aquáticos Tropicais, Instituto Socioambiental e dos Recursos Hídricos – ISARH, Universidade Federal Rural da Amazônia – UFRA, Avenida Presidente Tancredo Neves, 2501, CEP 66077-530, Belém, PA, Brazil bDepartamento de Oceanografia, Universidade Federal de Pernambuco – UFPE,Av. Arquitetura, s/n, Cidade Universitária, CEP 50670-901, Recife, PE, Brazil *e-mail: [email protected] Received: September 18, 2012 – Accepted: May 27, 2013 – Distributed: November 30, 2014 (With 7 figures) Abstract Lucifer faxoni (BORRADAILE, 1915) and L. typus (EDWARDS, 1837) are species first identified in the neritic and oceanic waters off the Amazon. Samplings were made aboard the vessel ”Antares” at 22 stations in July and August, 2001 with a bongo net (500-μm mesh size). Hydrological data were taken simultaneously for comparative purposes. L. faxoni was present at thirteen of the fourteen neritic stations analysed, as well as at five of the eight oceanic stations. L. typus was present at three of the fourteen neritic stations and in one of the eight oceanic stations. The highest density of L. faxoni in the neritic province was 7,000 ind.m–3 (St. 82) and 159 ind.m–3 (St. 75) in the oceanic area. For L. typus, the highest density observed was 41 ind.m–3 (St. 64) in the neritic province. -
Inshore Shrimps - Family, Genera and Species of Commercial Importance in India
Inshore shrimps - Family, Genera and species of commercial importance in India 10 S. Lakshmi Pillai Crustacean Fisheries Division, CMFRI, Kochi-18 Crustaceans are important component of the marine Family Benthesicymidae ecosystem being food for several predatory fishes and are Family Solenoceridae also valuable fishery resource in countries where they are Family Aristeidae fished on a commercial scale. Shrimps especially of the superfamily Penaeoidea (family Penaeidae) and Sergestoidea 2.Superfamily Sergestoidea (family Sergestidae) are commercially exploited by different gears along the Indian coast from inshore waters. They Family Luciferidae contribute substantially to the crustacean landings of the Family Sergestidae (Commercially important small size country and the larger varieties - Fenneropenaeus indicus, F. shrimps in inshore waters- Acetes spp.) merguiensis, F. pencillatus, Penaeus monodon and Penaeus semisulcatus are foreign exchange earners as they have good Infraorder Caridea demand in the international market. Similarly Acetes spp. forms good fishery in the northwest and northeast coast of 1.Superfamily Palaemonidae the country. They belong to the family Sergestidae and are small in size and usually dried or made into paste and used for Family Gnathophyllidae local consumption and poultry/aquaculture feed preparation. Family Hymenoceridae Classification of organisms in an area is essential to estimate Family Palaemonidae (Expalaemon styliferus & the quantum of biodiversity and make decisions on their Nematopalaemon tenuipes) management and conservation. Perez Farfante and Kensley Superfamily Alpheoidea (1997) have listed total of 401 species of shrimps of which Family Alpheidae 120 species have been recorded from Indian waters (inshore Family Hippolytidae (Exhippolysmata ensirostris & Lysmata and deepsea together). Almost all the inshore commercial vittata) shrimps are members of family Penaeidae. -
Pacific Ocean Synthesis
Pacific Ocean Synthesis Scientific Literature Review of Coastal and Ocean Threats, Impacts, and Solutions May 2009 This literature review was completed as of October 2008. The authors comprehensively reviewed the literature, but may have missed important reports and papers. If you know of a report or paper we have not included in this literature review documenting Pacific Ocean threats, impacts, or solutions please send the reference to [email protected]. Center for Ocean Solutions. 2009. Pacific Ocean Synthesis: Scientific Literature Review of Coastal and Ocean Threats, Impacts, and Solutions. The Woods Center for the Environment, Stanford University. California. © 2009 by the Board of Trustees of the Leland Stanford Junior University The Center for Ocean Solutions is a collaboration between Stanford University (including the Hopkins Marine S Station) (www.stanford.edu), the Monterey Bay Aquarium, and the Monterey Bay Aquarium Research Institute (MBARI) (www.mbayaq.org). The Center for Ocean Solutions is administered by the Woods Institute for the Environment at Stanford University. Primary authors: Margaret Caldwell, Tegan Churcher Hoffmann, Stephen Palumbi, Jessica Teisch, Chelsea Tu. Contributors are listed in Appendix A. EAN SOLUTION OC Cover Photo: Schooling Tuna (Danilo Cedrone, Courtesy of United Nations Food and Agriculture Organization) Photo on the right: School of fish in Palau (David Burdick) CENTER FOR B Abstract The objective of this Pacific Ocean synthesis is to comprehensively and systematically survey the published scientific literature, government publications and other peer-reviewed reports to identify Pacific Ocean and regional threats as well as the environmental and socioeconomic impacts of those threats. In addition, the report highlights select regional and Pacific Ocean solutions presented by the literature. -
Australian Species Oe Aristeidae and Benthesicymidae (Penaeoidea: Decapoda)
AUSTRALIAN SPECIES OE ARISTEIDAE AND BENTHESICYMIDAE (PENAEOIDEA: DECAPODA) W. DALL Dall, W. 2001 06 30: Australian species of Aristeidae and Benthesicymidae (Penaeoidea: Decapoda). Memoirs of the Queensland Museum 46(2): 409-441. Brisbane. ISSN 0079-8835. Twelve species of Aristeidae from Australian seas, representing all genera in the family, have been identified (indicates new records): Aristaeomorpha foliacea, Aristaeopsis edwardsiana,*Aristeus mabahissae, A. virilis, Austropenaeus nitidus, *Hemipenaeus carpenteri, *Hepomadus tener, *Parahepomadus vaubani, *Plesiopenaeus armatus, *P. coruscans, *Pseudaristeus kathleenae, *P. sibogae. (Aristeus semidentatus has also been recorded from Australia, but its identity could not be confirmed in existing museum collections). In the Benthesicymidae ten species have been identified: Benthesicymus investigator is, B. urinator, Gennadas bouveri, G. capensis, G. gilchristi, G. incertus, G. kempi, G. propinquus, G. scutatus, G. tinayrei, plus a new subspecies Benthesicymus urinator howensis. Definitions of the 2 families and the genera represented, with keys, are included. Keys to the Indo-West Pacific species are given, together with diagnoses of the Australian species. Zoogeography of the 2 families is discussed briefly. • Indo-West Pacific, Aristeidae, Benthesicymidae, Australia, diagnoses, distribution, zoogeography. W. Dall, Queensland Museum, PO Box 3300, South Brisbane, Queensland4101, Australia; 1 November 2000. Up to the late 19th century all penaeoid deca- Upper antennular flagellum of similar length to the lower pods were included in the Penaeidae. It was and attached apically to the third segment of the peduncle; prosartema well developed and foliaceous recognised, however, that there were major dif- Penaeidae ferences between some groups and Wood-Mason * In some solenocerid genera this could be identified as a (1891) identified 3 distinct deep-water groups in postantennal spine. -
Palaemonidae, Euryrhynchidae, Sergestidae
www.unal.edu.co/icn/publicaciones/caldasia.htm Caldasia 32(1):221-234. 2010 FRESHWATER SHRIMPS OF THE COLOMBIAN TRIBUTARIES OF THE AMAZON AND ORINOCO RIVERS (PALAEMONIDAE, EURYRHYNCHIDAE, SERGESTIDAE) Camarones de agua dulce de los afl uentes colombianos de los ríos Amazonas y Orinoco (Palaemonidae, Euryrhynchidae, Sergestidae) DIEGO M. VALENCIA Universidad de Bogotá Jorge Tadeo Lozano. [email protected] MARTHA R. CAMPOS Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Apartado 7495, Bogotá, D. C., Colombia. [email protected] ABSTRACT A review of freshwater shrimps belonging to the genera Palaemonetes, Pseudopalaemon, Euryrhynchus and Acetes of the Colombian tributaries of the Amazon and Orinoco Rivers is presented. The species found in this work are recorded for the fi rst time for Colombia: Palaemonetes ivonicus Holthuis, 1950, Palaemonetes mercedae Pereira, 1986, Pseudopalaemon amazonensis Ramos-Porto, 1979, Pseudopalemon chryseus Kensley & Walker, 1982, Euryrhynchus amazoniensis Tiefenbacher, 1978 and Acetes paraguayensis Hansen, 1919. Diagnoses, illustrations, distributional data and a key to the families, genera and species are presented. Key words. Freshwater shrimps, Palaemonidae, Euryrhynchydae, Sergestidae, Colombian tributaries of Amazon and Orinoco Rivers. RESUMEN Se presenta una revisión de los camarones de agua dulce de los géneros Palaemonetes, Pseudopalaemon, Euryrhynchus y Acetes de los afl uentes de los ríos Amozonas y Orinoco de Colombia. Las especies registradas en este trabajo constituyen los primeros registros para Colombia: Palaemonetes ivonicus Holthuis, 1950, Palaemonetes mercedae Pereira, 1986, Pseudopalaemon amazonensis Ramos-Porto, 1979, Pseudopalemon chryseus Kensley & Walker, 1982, Euryrhynchus amazoniensis Tiefenbacher, 1978 y Acetes paraguayensis Hansen, 1919. Se presentan las diagnosis, las ilustraciones, los datos sobre distribución y una clave para las familias, géneros y especies. -
Deep-Sea Mediterranean Biology: the Case of Aristaeomorpha Foliacea (Risso, 1827) (Crustacea: Decapoda: Aristeidae)*
sm68s3129-09 7/2/05 20:35 Página 129 SCI. MAR., 68 (Suppl. 3): 129-139 SCIENTIA MARINA 2004 MEDITERRANEAN DEEP-SEA BIOLOGY. F. SARDÀ, G. D’ONGHIA, C.-Y. POLITOU and A. TSELEPIDES (eds.) Deep-sea Mediterranean biology: the case of Aristaeomorpha foliacea (Risso, 1827) (Crustacea: Decapoda: Aristeidae)* CHRISSI-YIANNA POLITOU1, KONSTANTINOS KAPIRIS1, PORZIA MAIORANO2, FRANCESCA CAPEZZUTO2 and JOHN DOKOS1 1 Institute of Marine Biological Resources, Hellenic Centre for Marine Research, Agios Kosmas, 16604 Helliniko, Greece. E-mail: [email protected] 2 Dipartimento di Zoologia, Università di Bari, Via Orabona 4, 70125 Bari, Italy. SUMMARY: Data on the distribution, abundance and biological parameters of the giant red shrimp Aristaeomorpha foli- acea were collected during a research survey in deep waters (600-4000 m) of the Mediterranean Sea at three locations: the Balearic Sea, the western Ionian and the eastern Ionian in early summer 2001. The shrimp was mainly found in the shal- lower zone (< 1000 m) of the eastern Ionian Sea. Few specimens were caught in the deeper waters of this region, with 1100 m being the lower limit of its distribution. This is the maximum depth reported for the species in the Mediterranean. At the other two locations, the species was scarcely caught and only in the shallowest zone (< 1000 m). In the area and depth zone of high abundance, 5 modal groups for females and 3 for males were distinguished using the Bhattacharya method. The recruitment seems to take place at the shallowest stations (600 m). More than 50% of adult females were in advanced matu- rity stages.