(FDR<0.05) Enriched in the 1015 Genes Co-Clustered with Known T
Supplementary Table 3. Significant biological processes (FDR<0.05) enriched in the 1,015 genes co-clustered with known T cell gene signatures. Among 1,015 genes, 771 were associated with GO annotation in DAVID database v6.7. List Total: total number of genes in my list. Pop Hits: total number of genes associated with this GO term from the database. Pop Total: total number of genes in the database. Fold Enrichment: relative enrichment ratio, calculated by (Count)/(List Total) divided by (Pop Hits)/(Pop Total). Index Gene Ontology Accession Gene Ontology Name Count List Total Pop Hits Pop Total Fold Enrichment FDR Genes AQP9, C1QC, B2M, LILRA1, LILRA2, CLEC4E, S1PR4, LILRA4, IFNG, LILRA6, CLEC4A, VNN1, ERAP2, FAS, CRTAM, C5AR1, GBP5, NCF2, NCF1, NCF4, SERPING1, HLA-DQA2, HLA-DQA1, PDCD1LG2, LILRB1, CCR9, C1QA, C1QB, LILRB2, CCR7, CCR6, UNC13D, CCR5, CD40LG, CCR4, LILRB3, CCR2, LILRB4, HLA-DPA1, VSIG4, HLA-DRA, IL1R2, IL1R1, HLA-DRB1, OAS3, ACP5, OAS1, OAS2, CD74, IFI35, ZAP70, FCER1G, HLA-DRB5, HLA-DPB1, HLA-DOA, HLA-DOB, DHX58, BLNK, IL23R, KIR2DS4, CD300C, SLAMF7, OASL, RGS1, APOL1, CD300A, HMHB1, CD209, CLEC7A, LY86, LY9, CLNK, FCRL4, SH2D1A, NOD2, HAMP, CCL3L1, CCL3L3, TICAM2, ICAM1, GZMA, CMKLR1, LY96, WAS, IL18BP, LAX1, TNFSF12- TNFSF13, HLA-DQB1, CSF2, GPR183, CCR1, GPR65, CXCL9, NCF1C, IL7R, CLEC10A, CCL24, CCL22, CYP27B1, CCL23, FCGR1C, FTHL3, FCGR1A, FCGR1B, BCL3, C2, CD27, CD28, FYB, IL18R1, IL7, CD1C, CTLA4, CCL19, CD1B, CD1A, TRIM22, CD180, CD1E, CCL18, CCL17, CCL13, FCGR2B, FCGR2C, P2RY14, LIME1, CD14, IL16, IL18, TLR1, TNFSF15,
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