{Replace with the Title of Your Dissertation}
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Arrival of Round Goby Neogobius Melanostomus (Pallas, 1814) and Bighead Goby Ponticola Kessleri (Günther, 1861) in the High Rhine (Switzerland)
BioInvasions Records (2013) Volume 2, Issue 1: 79–83 Open Access doi: http://dx.doi.org/10.3391/bir.2013.2.1.14 © 2013 The Author(s). Journal compilation © 2013 REABIC Short Communication Arrival of round goby Neogobius melanostomus (Pallas, 1814) and bighead goby Ponticola kessleri (Günther, 1861) in the High Rhine (Switzerland) Irene Kalchhauser*, Peter Mutzner, Philipp E. Hirsch and Patricia Burkhardt-Holm Program Man-Society-Environment, Dept. of Environmental Sciences, University of Basel, Vesalgasse 1, 4051 Basel, Switzerland E-mail: [email protected] (IK), [email protected] (PM), [email protected] (PEH), [email protected] (PBH) *Corresponding author Received: 20 July 2012 / Accepted: 31 October 2012 / Published online: 22 November 2012 Handling editor: Vadim Panov Abstract A number of Ponto-Caspian gobiid species are currently invading European coasts and freshwaters. They do not only present a nuisance to fishermen, but evidence suggests that they compete with native benthic fishes and may contribute to changes in ecosystem function. This paper reports the presence of round goby Neogobius melanostomus individuals and an established population of bighead goby Ponticola kessleri in the High Rhine. Key words: gobiidae; non-native; alien; invasion; High Rhine; Switzerland 2001) was predicted to promote westward Introduction migration of fish species (Balon et al. 1986), including Ponto-Caspian gobiids (Proterorhinus Several goby species from the Caspian and Black marmoratus). In the meantime, five of six gobiid Sea are currently spreading in European rivers. species predicted to invade the Rhine (Freyhof Ponticola kessleri (Günther, 1861; Neilson and 2003) have indeed arrived. Their dispersal Stepien 2009), Neogobius melanostomus (Pallas, appears to be facilitated by shipping, as round 1814), Proterorhinus marmoratus (Pallas, 1814), goby dispersal has followed shipping routes Neogobius fluviatilis (Pallas, 1814), and Babka (Brown and Stepien 2009; LaRue et al. -
A Dissertation Entitled Evolution, Systematics
A Dissertation Entitled Evolution, systematics, and phylogeography of Ponto-Caspian gobies (Benthophilinae: Gobiidae: Teleostei) By Matthew E. Neilson Submitted as partial fulfillment of the requirements for The Doctor of Philosophy Degree in Biology (Ecology) ____________________________________ Adviser: Dr. Carol A. Stepien ____________________________________ Committee Member: Dr. Christine M. Mayer ____________________________________ Committee Member: Dr. Elliot J. Tramer ____________________________________ Committee Member: Dr. David J. Jude ____________________________________ Committee Member: Dr. Juan L. Bouzat ____________________________________ College of Graduate Studies The University of Toledo December 2009 Copyright © 2009 This document is copyrighted material. Under copyright law, no parts of this document may be reproduced without the expressed permission of the author. _______________________________________________________________________ An Abstract of Evolution, systematics, and phylogeography of Ponto-Caspian gobies (Benthophilinae: Gobiidae: Teleostei) Matthew E. Neilson Submitted as partial fulfillment of the requirements for The Doctor of Philosophy Degree in Biology (Ecology) The University of Toledo December 2009 The study of biodiversity, at multiple hierarchical levels, provides insight into the evolutionary history of taxa and provides a framework for understanding patterns in ecology. This is especially poignant in invasion biology, where the prevalence of invasiveness in certain taxonomic groups could -
The Round Goby (Neogobius Melanostomus):A Review of European and North American Literature
ILLINOI S UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN PRODUCTION NOTE University of Illinois at Urbana-Champaign Library Large-scale Digitization Project, 2007. CI u/l Natural History Survey cF Library (/4(I) ILLINOIS NATURAL HISTORY OT TSrX O IJX6V E• The Round Goby (Neogobius melanostomus):A Review of European and North American Literature with notes from the Round Goby Conference, Chicago, 1996 Center for Aquatic Ecology J. Ei!en Marsden, Patrice Charlebois', Kirby Wolfe Illinois Natural History Survey and 'Illinois-Indiana Sea Grant Lake Michigan Biological Station 400 17th St., Zion IL 60099 David Jude University of Michigan, Great Lakes Research Division 3107 Institute of Science & Technology Ann Arbor MI 48109 and Svetlana Rudnicka Institute of Fisheries Varna, Bulgaria Illinois Natural History Survey Lake Michigan Biological Station 400 17th Sti Zion, Illinois 6 Aquatic Ecology Technical Report 96/10 The Round Goby (Neogobius melanostomus): A Review of European and North American Literature with Notes from the Round Goby Conference, Chicago, 1996 J. Ellen Marsden, Patrice Charlebois1, Kirby Wolfe Illinois Natural History Survey and 'Illinois-Indiana Sea Grant Lake Michigan Biological Station 400 17th St., Zion IL 60099 David Jude University of Michigan, Great Lakes Research Division 3107 Institute of Science & Technology Ann Arbor MI 48109 and Svetlana Rudnicka Institute of Fisheries Varna, Bulgaria The Round Goby Conference, held on Feb. 21-22, 1996, was sponsored by the Illinois-Indiana Sea Grant Program, and organized by the -
Neogobius Melanostomus) Populations Inhabiting Black Sea and North-West European Water Basins As Revealed by Variability in Cytochrome B Gene
100 Bulgarian Journal of Agricultural Science, 21 (Supplement 1) 2015, 100–105 Agricultural Academy COMPARATIVE STUDY OF ROUND GOBY (NEOGOBIUS MELANOSTOMUS) POPULATIONS INHABITING BLACK SEA AND NORTH-WEST EUROPEAN WATER BASINS AS REVEALED BY VARIABILITY IN CYTOCHROME B GENE F. TSERKOVA1,2, I. KIRILOVA2, T. TCHOLAKOVA4, M. GEVEZOVA-KAZAKOVA3, D. KLISAROVA1, J. JOHANNESEN4 and I. DENEV2,* 1 Institute of Fish Resources (Agricultural Academy), BG – 9000 Varna, Bulgaria 2 University of Plovdiv, Department of Plant Physiology and Molecular Biology, BG – 4000 Plovdiv, Bulgaria 3 Institute of Fisheries and Aquaculture, BG – 4000 Plovdiv, Bulgaria 4 Johannes Gutenberg University of Mainz, Institute of Zoology, Dept. Ecology, J.-J. Becher-Weg 7, 55128 Mainz, Germany Abstract TSERKOVA, F., I. KIRILOVA, T. TCHOLAKOVA, M. GEVEZOVA-KAZAKOVA, D. KLISAROVA, J. JO- HANNESEN and I. DENEV, 2015. Comparative study of round goby (Neogobius melanostomus) populations inhabiting Black Sea and North-West European water basins as revealed by variability in cytochrome b gene. Bulg. J. Agric. Sci., Supplement 1, 21: 100–105 The round goby (Neogobius melanostomus) is a euryhalinebottom-residing fi sh, native to central Eurasia. It is widespread in the Sea of Marmara, Black Sea, Caspian Sea and Sea of Azov where it has been reported along all coasts and in fresh water bodies, including coastal lakes and lagoons. The species was accidentally introduced via ballast water of cargo ships in North West Europe and North America as well as the basins of several major West European rivers like the Rhine, Mosel, Elba etc. In the present study, we used variability of cytochrome b gene to compare 30 samples from the West European Rivers Rhine and Mosel with 41 samples representing Black Sea natural populations in order to study phylogenetic relations between these regions. -
Patterns of Evolution in Gobies (Teleostei: Gobiidae): a Multi-Scale Phylogenetic Investigation
PATTERNS OF EVOLUTION IN GOBIES (TELEOSTEI: GOBIIDAE): A MULTI-SCALE PHYLOGENETIC INVESTIGATION A Dissertation by LUKE MICHAEL TORNABENE BS, Hofstra University, 2007 MS, Texas A&M University-Corpus Christi, 2010 Submitted in Partial Fulfillment of the Requirements for the Degree of DOCTOR OF PHILOSOPHY in MARINE BIOLOGY Texas A&M University-Corpus Christi Corpus Christi, Texas December 2014 © Luke Michael Tornabene All Rights Reserved December 2014 PATTERNS OF EVOLUTION IN GOBIES (TELEOSTEI: GOBIIDAE): A MULTI-SCALE PHYLOGENETIC INVESTIGATION A Dissertation by LUKE MICHAEL TORNABENE This dissertation meets the standards for scope and quality of Texas A&M University-Corpus Christi and is hereby approved. Frank L. Pezold, PhD Chris Bird, PhD Chair Committee Member Kevin W. Conway, PhD James D. Hogan, PhD Committee Member Committee Member Lea-Der Chen, PhD Graduate Faculty Representative December 2014 ABSTRACT The family of fishes commonly known as gobies (Teleostei: Gobiidae) is one of the most diverse lineages of vertebrates in the world. With more than 1700 species of gobies spread among more than 200 genera, gobies are the most species-rich family of marine fishes. Gobies can be found in nearly every aquatic habitat on earth, and are often the most diverse and numerically abundant fishes in tropical and subtropical habitats, especially coral reefs. Their remarkable taxonomic, morphological and ecological diversity make them an ideal model group for studying the processes driving taxonomic and phenotypic diversification in aquatic vertebrates. Unfortunately the phylogenetic relationships of many groups of gobies are poorly resolved, obscuring our understanding of the evolution of their ecological diversity. This dissertation is a multi-scale phylogenetic study that aims to clarify phylogenetic relationships across the Gobiidae and demonstrate the utility of this family for studies of macroevolution and speciation at multiple evolutionary timescales. -
The Round Goby Genome Provides Insights Into Mechanisms That May Facilitate Biological Invasions
Adrian-Kalchhauser et al. BMC Biology (2020) 18:11 https://doi.org/10.1186/s12915-019-0731-8 RESEARCH ARTICLE Open Access The round goby genome provides insights into mechanisms that may facilitate biological invasions Irene Adrian-Kalchhauser1,2* , Anders Blomberg3†, Tomas Larsson4†, Zuzana Musilova5†, Claire R. Peart6†, Martin Pippel7†, Monica Hongroe Solbakken8†, Jaanus Suurväli9†, Jean-Claude Walser10†, Joanna Yvonne Wilson11†, Magnus Alm Rosenblad3,12†, Demian Burguera5†, Silvia Gutnik13†, Nico Michiels14†, Mats Töpel2†, Kirill Pankov11†, Siegfried Schloissnig15† and Sylke Winkler7† Abstract Background: Theinvasivebenthicroundgoby(Neogobius melanostomus) is the most successful temperate invasive fish and has spread in aquatic ecosystems on both sides of the Atlantic. Invasive species constitute powerful in situ experimental systems to study fast adaptation and directional selection on short ecological timescales and present promising case studies to understand factors involved the impressive ability of some species to colonize novel environments. We seize the unique opportunity presented by the round goby invasion to study genomic substrates potentially involved in colonization success. Results: We report a highly contiguous long-read-based genome and analyze gene families that we hypothesize to relate to the ability of these fish to deal with novel environments. The analyses provide novel insights from the large evolutionary scale to the small species-specific scale. We describe expansions in specific cytochromeP450enzymes,aremarkablydiverse innate immune system, an ancient duplication in red light vision accompanied by red skin fluorescence, evolutionary patterns of epigenetic regulators, and the presence of osmoregulatory genes that may have contributed to the round goby’s capacity to invade cold and salty waters. A recurring theme across all analyzed gene families is gene expansions. -
353 Length-Weight Relationship and Condition Factor of Aksu Goby
Acta Aquatica Turcica E-ISSN: 2651-5474 16(3), 353-359 (2020) DOI: https://doi.org/10.22392/actaquatr.686463 Length-Weight Relationship and Condition Factor of Aksu goby, Ponticola turani (Kovačić & Engin, 2008) from Terme Stream (Turkey) Savaş YILMAZ* , Muhammet Mustafa SAKALLI Department of Biology, Faculty of Arts and Sciences, Ondokuz Mayıs University, Samsun, Turkey *Corresponding Author: [email protected] Research Article Received 07 February 2020; Accepted 16 August 2020; Release date 01 September 2020. How to Cite: Yılmaz, S., & Sakallı, M. M. (2020). Length-weight relationship and condition factor of Aksu goby, Ponticola turani (Kovačić & Engin, 2008) from Terme Stream (Turkey). Acta Aquatica Turcica, 16(3), 353-359. https://doi.org/10.22392/actaquatr.686463 Abstract The present study describes the length-weight relationship (LWR) and condition factor of Ponticola turani (Aksu goby) based on 214 individuals from Terme Stream, the northern Turkey. Fish were collected by electrofishing in four different months between June 2015 and August 2016. LWRs of females and males were not significantly different within the same sampling month and among sampling months. The b value of LWR was calculated as 2.86 for females and 2.85 for males. Negative allometric growth was detected in both sexes, without significant difference between their b values. Fulton's condition factor (K) ranged from 0.72 to 1.48 in females and from 0.84 to 1.31 in males; the relative condition factor (Kn) ranged from 0.65 to 1.26 for females and from 0.76 to 1.18 for males. There was a significant difference in mean K of sexes, whereas no considerable difference was detected between their mean Kn. -
Ponticola Patimari Sp. Nov. (Gobiiformes: Gobiidae) from the Southern Caspian Sea Basin, Iran
FishTaxa (2020) 17: 22-31 Journal homepage: www.fishtaxa.com © 2020 FISHTAXA. All rights reserved Ponticola patimari sp. nov. (Gobiiformes: Gobiidae) from the southern Caspian Sea basin, Iran Soheil EAGDERI*, Nasrin NIKMEHR, Hadi POORBAGHER Department of Fisheries, Faculty of Natural Resources, University of Tehran, Karaj, Iran. Corresponding author: *E-mail: [email protected] Abstract Ponticola patimari, new species, is described from the Kheirud River, southern Caspian Sea basin, Iran. It is distinguished from its congeners in Iran by having the following features: D1 VI, D2 I / 15½–18½, A I / 11½–13½; mottled bars on flanks, small scattered spots on pectoral-fin base, cycloid scales covering upper part of opercle, longer least depth of caudal peduncle, longer ventral disc, reaching corner of lip to middle of orbit, longer interorbital width / eye diameter, pelvic fin reaching to anus or even extending beyond anus, two dark brown spots under orbital and 3 fixed diagnostic nucleotide substitutions in the mtDNA COI barcode region. Ponticola patimari sp. nov. belongs to P. syrman group and it is separated by a minimum K2P distance of 3.0 and 3.4% from P. iranicus and P. syrman, respectively. Keywords: Freshwater fish, Taxonomy, Cytochrome oxidase I, Caspian Sea. Zoobank: urn:lsid:zoobank.org:pub:0A5F4594-4CE7-41B7-B0FB-E69A3396337F urn:lsid:zoobank.org:pub:0A5F4594-4CE7-41B7-B0FB-E69A3396337F Citation: Eagderi S., Nikmehr N., Poorbagher H. 2020. Ponticola patimari sp. nov. (Gobiiformes: Gobiidae) from the southern Caspian Sea basin, Iran. FishTaxa 17: 22-31. Introduction The freshwater fish species of the southern Caspian Sea basin comprise 119 species, which Gobiiformes with 38 species form the second most divers order (Esmaeili et al. -
The Racer Goby, Babka Gymnotrachelus (Kessler, 1857) Invades the Evros River: Evidence of Recent Establishment in Greece
Knowl. Manag. Aquat. Ecosyst. 2019, 420, 13 Knowledge & © S. Zogaris et al., Published by EDP Sciences 2019 Management of Aquatic https://doi.org/10.1051/kmae/2019006 Ecosystems www.kmae-journal.org Journal fully supported by Onema SHORT COMMUNICATION The racer goby, Babka gymnotrachelus (Kessler, 1857) invades the Evros river: evidence of recent establishment in Greece Stamatis Zogaris*, Alexandros Ntakis and Roberta Barbieri Hellenic Centre for Marine Research, Institute of Marine Biological Resources and Inland Waters, Athinon-Souniou Ave. Anavissos, Attica 19013, Greece Abstract – The discovery of the racer goby Babka gymnotrachelus in the transboundary Evros river basin, collected on September 10th 2018 at two locations very close to the Greek-Bulgarian and Greek-Turkish borderlines, is reported. This is a new addition to the non-native ichthyofauna of Greece and the Aegean Sea drainages, and it is the second non-native Ponto-Caspian goby to enter this river. Boat-based electrofishing sampling, following the EU Water Framework Directive monitoring program, provides first evidence of what is presumed to be a recently established population; most of the 13 collected specimens are juveniles and the species has not yet been located in the river's tributaries. Further study and international cooperation in monitoring and management of this and other alien species in the Evros are proposed. Keywords: Babka gymnotrachelus / Evros river / alien species / transboundary river / Balkans Résumé – Le gobie coureur, Babka gymnotrachelus (Kessler, 1857) envahit la rivière Evros : preuve d'une implantation récente en Grèce. La présence du gobie coureur Babka gymnotrachelus dans le bassin transfrontalier du fleuve Evros, prélevé le 10 septembre 2018 à deux endroits très proches des frontières gréco-bulgare et gréco-turque, est signalée. -
Long-Read Sequencing of Benthophilinae Mitochondrial Genomes Reveals the Origins of Round Goby Mitogenome Re-Arrangements
Research Collection Journal Article Long-read sequencing of benthophilinae mitochondrial genomes reveals the origins of round goby mitogenome re-arrangements Author(s): Gutnik, Silvia; Walser, Jean-Claude; Adrian-Kalchhauser, Irene Publication Date: 2019-01-08 Permanent Link: https://doi.org/10.3929/ethz-b-000317088 Originally published in: Mitochondrial DNA Part B: Resources 4(1), http://doi.org/10.1080/23802359.2018.1547133 Rights / License: Creative Commons Attribution 4.0 International This page was generated automatically upon download from the ETH Zurich Research Collection. For more information please consult the Terms of use. ETH Library Mitochondrial DNA Part B Resources ISSN: (Print) 2380-2359 (Online) Journal homepage: https://www.tandfonline.com/loi/tmdn20 Long-read sequencing of benthophilinae mitochondrial genomes reveals the origins of round goby mitogenome re-arrangements Silvia Gutnik, Jean-Claude Walser & Irene Adrian-Kalchhauser To cite this article: Silvia Gutnik, Jean-Claude Walser & Irene Adrian-Kalchhauser (2019) Long-read sequencing of benthophilinae mitochondrial genomes reveals the origins of round goby mitogenome re-arrangements, Mitochondrial DNA Part B, 4:1, 408-409, DOI: 10.1080/23802359.2018.1547133 To link to this article: https://doi.org/10.1080/23802359.2018.1547133 © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. Published online: 08 Jan 2019. Submit your article to this journal Article views: 78 View Crossmark data Full Terms & Conditions of access and use can -
The Ecological Niche of Invasive Gobies at the Lower Rhine in Intra- and Interspecific Competitive and Predatory Interactions
The ecological niche of invasive gobies at the Lower Rhine in intra- and interspecific competitive and predatory interactions I n a u g u r a l – D i s s e r t a t i o n zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultät der Universität zu Köln vorgelegt von Svenja Gertzen aus Rhede Bocholt 2016 Berichterstatter (Gutachter): PD. Dr. habil. Jost Borcherding Prof. Dr. Hartmut Arndt Tag der mündlichen Prüfung: 13.04.2016 1 2 «Bei einem Fluss ist das Wasser das man berührt das letzte von dem was vorübergeströmt ist und das erste von dem was kommt. So ist es auch mit der Gegenwart.» Leonardo da Vinci (1452 – 1519) «Es gibt Menschen, die Fische fangen und solche, die nur das Wasser trüben.» Chinesische Weisheit 3 DANKSAGUNG / ACKNOWLEDGEMENTS Mein ausdrücklicher Dank gilt PD Dr. habil. Jost Borcherding, für die Überlassung eines faszinierenden Themas, die Ermöglichung der Promotion, ausdauernde Geduld und das in mich gesetzte Vertrauen. Ohne seinen fachkundiger Rat, die intensiven Diskussionen und sein unendliches Verständnis gäbe es diese Arbeit nicht. Danke, dass du dich jederzeit für mich eingesetzt hast. Prof. Dr. Hartmut Arndt möchte ich für die Begutachtung dieser Promotion und seine Unterstützung danken. Ohne die finanzielle Unterstützung des Ministeriums für Klimaschutz, Umwelt, Landwirtschaft, Natur- und Verbraucherschutz des Landes Nordrhein-Westfalens wäre die Arbeit an diesem spannenden Thema nicht möglich gewesen. Da die Arbeit aus Mitteln der Fischereiabgabe finanziert wurde, danke ich hiermit insbesondere den Fischereiverbänden NRWs, sowie dem LANUV, für die stets gute Kooperation, viele wichtige Informationen und Diskussionen. I would like to thank Dr. -
Molecular Analysis Reveals the Invasion of Eastern Tubenose Goby Proterorhinus Nasalis De Filippi, 1863 (Perciformes: Gobiidae) Into the Baltic Sea
BioInvasions Records (2021) Volume 10, Issue 3: 701–709 CORRECTED PROOF Rapid Communication Molecular analysis reveals the invasion of eastern tubenose goby Proterorhinus nasalis De Filippi, 1863 (Perciformes: Gobiidae) into the Baltic Sea Andro Truuverk1, Imre Taal2, Redik Eschbaum2, Anu Albert2, Aare Verliin2, Katariina Kurina2 and Lauri Saks2,* 1Natural History Museum, University of Tartu, Vanemuise 46, 51014, Tartu, Estonia 2Estonian Marine Institute, University of Tartu, Vanemuise 46A, 51014 Tartu, Estonia Author e-mails: [email protected] (AT), [email protected] (IT), [email protected] (RE), [email protected] (AA), [email protected] (AV), [email protected] (KK), [email protected] (LS) *Corresponding author Citation: Truuverk A, Taal I, Eschbaum R, Albert A, Verliin A, Kurina K, Saks L Abstract (2021) Molecular analysis reveals the invasion of eastern tubenose goby We report the first confirmed record of the invasive alien species, eastern tubenose Proterorhinus nasalis De Filippi, 1863 goby Proterorhinus nasalis (De Filippi, 1863) in the Baltic Sea as a first verified (Perciformes: Gobiidae) into the Baltic record of this species outside Azov and Caspian Sea basins and the Volga River Sea. BioInvasions Records 10(3): 701–709, system. Several tubenose gobies with inconclusive morphometrical characteristics https://doi.org/10.3391/bir.2021.10.3.20 were caught from the Narva Bay, eastern part of Gulf of Finland in September 2020. Received: 8 March 2021 Phylogenetic analysis of caught individuals confirmed their taxonomic classification Accepted: 28 April 2021 as Proterorhinus nasalis. Relatively high abundance of tubenose gobies hints that Published: 23 July 2021 P. nasalis may have established a naturalized population in the Narva Bay.