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Generate Metabolic Map Poster Authors: Bo Xue Angela Xu Pascal Schlapfer Charles Hawkins Seung Yon Rhee Emily Fryer AraCyc: Arabidopsis thaliana col Cellular Overview Peifen Zhang 4-hydroxybenzoate AT2G28780 4-hydroxybenzoate phytosterol biosynthesis (plants) Secondary Metabolite Biosynthesis casbene camalexin spermidine hydroxycinnamic acid conjugates biosynthesis plant sterol biosynthesis II jasmonic acid biosynthesis superpathway of scopolin and esculin biosynthesis matairesinol biosynthesis chlorogenic acid biosynthesis I flavonoid biosynthesis (in equisetum) 4-hydroxyindole- glucosinolate superpathway of flavones and derivatives biosynthesis superpathway of gibberellin biosynthesis glucosinolate biosynthesis from homomethionine glucosinolate biosynthesis from phenylalanine biosynthesis myricetin 3-carbonyl nitrile protein N-glycosylation initial phase (eukaryotic) Carbohydrate Biosynthesis biosynthesis biosynthesis from tyrosine superpathway of fatty acid biosynthesis II (plant) Fatty Acid and Lipid Biosynthesis gluconeogenesis I GDP-L-fucose CMP-3-deoxy-D- GDP-L-fucose starch biosynthesis sucr cycloartenol acyl-[acyl- vernolate cis-vaccenate lipid IV biosynthesis superpathway of phosphatidylcholine biosynthesis phosphatidylethanolamine 3-phosphoinositide biosynthesis linoleate (E)-4- gentiobioside biosynthesis (+)- superpathway of phospholipid biosynthesis II (plants) A manno-octulosonate α-linolenate coniferyl alcohol (E)-4-coumaroyl-CoA malonyl-CoA biosynthesis II biosynthesis biosynthesis III biosynthesis II biosynthesis I (from coumaroyl-CoA (2E,6E)-farnesyl diphosphate biosynthesis phe GGPP L-homomethionine phe dihydrokaempferol carrier protein] biosynthesis I (plants) GGPP trp tyr acetyl-CoA a (3R)-3- a dolichyl phosphate (from L-fucose) biosynthesis GDP-D-mannose) maltose sterol farnesyl-diphosphate linolenate 13S- trp thioesterase pathway 1-palmitoyl-2-linoleoyl- O-phosphoethanolamine a 3-sn-phosphatidyl- myo-inositol UDP-N-acetyl-α-D-glucosamine (S)-malate D-ribulose F6P casbene methyltransferase: L-tryptophan N- spermidine:4- myricetin lipoxygenase: LOX6 naringenin-chalcone DHAP hydroxytetradecanoyl- UDP-N-acetyl- α farnesyltransferase: phenylalanine phenylalanine N- L-tryptophan N- dihydrokaempferol a palmitoleoyl-[acp] oleoyl-CoA L-fucopyranose GDP- -D-mannose synthetase: monooxygenase: coumaroyl-CoA N- myricetin 3-O- ent-copalyl diphosphate shikimate O- hydroxycinnamoyl-CoA quinate CYP79F2 tyrosine N- (+)- an acyl-[acyl- phosphatidylcholine α L-serine 5-phosphate SMT2 SQS1 linolenate 13S- synthase: AT5G13930 monooxygenase: linoleate [acp] -D-glucosamine phosphoethanolamine phosphatidylinositol lysophospholipid L-fucokinase: D-arabinose GDP- glucose-6- β α AT1G58265 acyltransferase: ammonia- synthase: CPS hydroxycinnamoyltransferase: hydroxycinnamoyltransferase: monooxygenase: monooxygenase: dihydrokaempferol synthase: FLS carrier protein] glycerol-3- 3-oxo-cis- -maltose 4- - AT3G13030 glucosyltransferase: lipoxygenase: LOX4 homomethionine AT1G58265 acyl-[acp] epoxidase: oleoyltransferase: UDP-N-acetylglucosamine--dolichyl- 5-phosphate mannose 4,6- phosphate sterol squalene lyase: PAL1 coniferyl AT5G48930 AT5G48930 CYP79A2 3'-hydroxylase: vaccenoyl- N-methyltransferase: synthase: AT4G38570 AT1G01220 glucanotransferase: casbene AT2G19070 UGT78D1 monooxygenase: naringenin chalcone CYP79B2 phosphate phosphate N- L-tryptophan N- thioesterase: AT5G04660 UDP-N- an L-1- LPLAT1 β-L-fucose isomerase: dehydratase: isomerase: methyltransferase: synthase: SQS2 myricetin 3-O- linolenate 13S- [+ 3 isozymes] alcohol radical (-)-ent-copalyl diphosphate [+ 2 isozymes] L-tryptophan N- CYP75B1 (+)-dihydromyricetin [acp] AT3G18000 phosphatidylinositol a [glycerolipid]- AT2G40840 monooxygenase: tricoumaroyl [+ 12 isozymes] AT1G16400 superpathway of kaempferol malonyl-CoA dehydrogenase: acetylglucosamine phosphatidylethanolamine acetylglucosaminephosphotransferase: SMT1 squalene β-D-glucoside lipoxygenase: LOX3 monooxygenase: AT1G68280 [+ 6 isozymes] an (11Z)-3-synthase [+ 5 isozymes] synthase: AtPIS1 1-phosphate aldehydoAT3G54690-D- AT5G66280 AT5G42740 CYP79B2 Naringenin chalcone N-hydroxy-L-tyrosine 1-palmitoyl-2-vernoloyl- GPDHp acyltransferase: oleate AT3G57220 spermidine cinnamate trans-5-O-(4-coumaroyl)-D-quinate CYP79F2 geranylgeranyldiphosphate Flavonol GDP- β linolenate 13S- isomerase: AT3G55120 N-hydroxy-L-phenylalanine CYP79B2 [acyl-carrier-protein] S acyl-[acp] phosphatidylcholine oxooctadec- N-methylethanolamine a 1-phosphatidyl- oleoyl-lipid 12- GDP-L-fucose arabinose glucose-6- a plant soluble heteroglycan 24-methylenecycloartanol L-tryptophan N- squalene,NADPH:oxygen benzoyl- -D- ent-kaurene synthase: KS1 trans-5-O-(4-coumaroyl)shikimate homomethionine biosynthesis I (via mevalonate) (+)-taxifolin synthase: sn-glycerol AT4G29540 UDP-N-acetylglucosamine--dolichyl- lipoxygenase: LOX2 L-tryptophan N- tyrosine N- flavonoid 3'- kaempferol 3-O- kaempferol 3- kaempferol 7- -malonyltransferase: thioesterase: 11-enoyl-[acp] 1D-myo-inositol pyrophosphorylase: 5-phosphate mannose 4,6- phosphate glucopyranose cinnamate 4- trans-5-O-(4-coumaroyl)- Naringenin chalcone phosphate oleoyl-lipid 12- desaturase: monooxygenase: tricoumaroyl oxidoreductase (2,3- monooxygenase: AT5G63600 3-phosphate phosphate N- dehydratase: 24-methylenecycloartanol 13(S)-HPOTE isomerase: AT5G66220 N-hydroxy-L- monooxygenase: acetyl-CoA monooxygenase: monooxygenase: glucosyltransferase: rhamnosyltransferase: glucosyltransferase: AT2G30200 AT1G68260 3-oxoacyl- UDP-3-O-[(3R)-3- desaturase: fad6 AT1G01220 isomerase: PGI1 CYP79B3 spermidine epoxidizing): SQE3 biosynthesis myricetin 3-O hydroxylase: (+)-pinoresinol (-)-pinoresinol p-coumaroyl ester 3'- D-quinate,NADPH:oxygen AT1G16410 quercetin [+ 6 isozymes] acetylglucosaminephosphotransferase: α N 2 -hydroxy- ent-kaurene phenylalanine N- CYP79B3 acetyl-CoA CYP79B2 CYP75B1 UGT73B2 UGT78D1 UGT73B3 acyl-[acp] [ACP] phosphatidylinositol phosphatidylinositol AT3G51160 α 4 -methyl oxidase: hydroxylase: (E)-caffeoyl-CoA -gentiobioside allene oxide ATC4H hydroxylase: AT5G09970 oxidoreductase (3- [+ 5 isozymes] synthase: hydroxymyristoyl]- N-methylphosphoethanolamine fad6 oleoyl-lipid 12- β GDP-4-dehydro- SHG -glucan squalene,NADPH:oxygen 2 AT2G41490 GDP- -L-fucose D-glucopyranose 6-phosphate L-tryptophan benzoate (E)-4-(methylsulfanyl)butanal oxime monooxygenase: N -hydroxy-L-tryptophan acetyltransferase: AACT1 [+ 3 isozymes] kaempferol 7- a malonyl-[acp] thioesterase: acyl-CoA:sn reductase: N-acetyl-α-D- 4-kinase: AT5G64070 3-kinase: AT2G32760 malate AT4G12110 CYP98A9 synthase: (+)- (-)- p-coumaroyl ester 3'- hydroxylating): AT5G09970 FLS myricetin N-methyltransferase: AT3G18000 desaturase: D-arabinofuranose α-D-rhamnose phosphorylase: oxidoreductase (2,3- UDP-glucose: 4-coumarate ent-kaur-16-ene (2S)-naringenin CYP79A2 N,N-dihydroxy-L-tyrosine kaempferol 3-O kaempferol-3-O-α- -glycerol-3- AT1G24360 24-methylenecycloartanol pinoresinol pinoresinol acetyl-CoA glucosyltransferase: AT1G35250 glucosamine phosphatidylinositol 4- phosphatidylinositol N-acetyl-α-D-glucosaminyl- dehydrogenase: 5-phosphate phosphoglucomutase: AT3G46970 N-hydroxy-L- tricoumaroyl epoxidizing): SQE2 CYP74A1 hydroxylase: REF8 trans-5-O-(4-coumaroyl)- CYP83A1 4- [+ 7 isozymes] β β-ketoacyl- acyl-acp:sn fad2 GDP-L-fucose α spermidine:caffeoyl- benzoate oxidase: GA3 [+ 2 isozymes] N-hydroxy-L- acetyltransferase: AACT2 myricetin 3'-O- - -D-glucoside L-rhamnopyranoside UGT73B2 phosphate 1-O- [+ 7 isozymes] UDP-3-O-acyl-N- kinase: PI4K ALPHA 3-kinase: AT1G60490 mMDH1 4 -methyl tryptophan N- reductase: reductase: quercetin acyl-[acp] -glycerol-3- N-dimethylethanolamine a [glycerolipid]- diphosphodolichol malate 3-deoxy- synthase: PGM spermidine CoA N- squalene,NADPH:oxygen glucosyltransferase: (9Z,13S,15Z)-12,13- D-quinate,NADPH:oxygen methylthiobutanaldoxime tryptophan N- acetoacetyl-CoA N,N-dihydroxy- quercetin methyltransferase: ACP synthase: ser acyltransferase: a (3R,11Z)-3- monooxygenase: SMO1-2 monooxygenase: 4-coumarte,NADPH:oxygen AT1G32100 AT1G32100 5-O-caffeoylshikimate (S)-naringenin 3- naringenin 3'- N,N-dihydroxy- kaempferol 7- thioesterase: phosphate 1-O- acetylglucosamine [+ 14 isozymes] N-acetylglucosaminyldiphosphodolichol malate GER2 [+ 4 isozymes] hydroxylase: acyltransferase: oxidoreductase (2,3- UGT74F2 epoxyoctadeca-9,11,15-trienoate ent-kaurenol oxidoreductase (3- monooxygenase: CYP83A1 monooxygenase: L-tyrosine OMT1 kaempferol 3-glucoside kaempferol-3-glucoside- kaempferol 3- kaempferol-3- AT1G62640 AT5G06090 hydroxyoctadec- phosphate a 1-phosphatidyl- linoleate dehydrogenase: malate D-manno- deacetylase: 24-methylenecycloartanol AT1G58265 oxidoreductase (3- (-)- dioxygenase: FLS hydroxylase: CYP75B1 L-phenylalanine glucosyltransferase: AT1G35290 acyltransferase: N-acetylglucosaminyltransferase: dehydrogenase: AT1G74540 AT2G19070 epoxidizing): SQE1 chrysoeriol allene oxide (+)-lariciresinol hydroxylating): REF8 AT1G58265 hydroxymethyl glutaryl- carboxy-lyase: 7-rhamnosyltransferase: glucosyltransferase: rhamnoside 7- rhamnoside- serine 11-enoyl-[acp] a 1-phosphatidyl- 1D-myo-inositol lysophospholipid AT5G58330 dehydrogenase, octulosonate GDP-L-fucose α-D-glucopyranose 1-phosphate D-gluc α UDP-glucose: hydroxylating): REF8 UGT73B1 AT3G11325 acyl-CoA:sn AT1G24793 AT4G16710 PMDH1 4 -methyl N-hydroxy-L- biosynthesis cyclase: pinoresinol ent-kaurenol 19- caffeoyl-CoA:shikimate 1-(methylsulfanyl)-4-aci-nitrobutane (S)-naringenin N,N-dihydroxy- quercetin 3- quercetin 3'-O- quercetin 3-O- quercetin 3-O- quercetin 7-O- UDP-L- laricitrin kaempferol 3-O- UGT73B2
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