Iron Complexes for Hydrogen Activation and Catalytic Hydrogenation
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Transition Metal Hydrides That Mediate Catalytic Hydrogen Atom Transfers
Transition Metal Hydrides that Mediate Catalytic Hydrogen Atom Transfers Deven P. Estes Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the Graduate School of Arts and Sciences COLUMBIA UNIVERSITY 2014 © 2014 Deven P. Estes All Rights Reserved ABSTRACT Transition Metal Hydrides that Mediate Catalytic Hydrogen Atom Transfers Deven P. Estes Radical cyclizations are important reactions in organic chemistry. However, they are seldom used industrially due to their reliance on neurotoxic trialkyltin hydride. Many substitutes for tin hydrides have been developed but none have provided a general solution to the problem. Transition metal hydrides with weak M–H bonds can generate carbon centered radicals by hydrogen atom transfer (HAT) to olefins. This metal to olefin hydrogen atom transfer (MOHAT) reaction has been postulated as the initial step in many hydrogenation and hydroformylation reactions. The Norton group has shown MOHAT can mediate radical cyclizations of α,ω dienes to form five and six membered rings. The reaction can be done catalytically if 1) the product metalloradical reacts with hydrogen gas to reform the hydride and 2) the hydride can perform MOHAT reactions. The Norton group has shown that both CpCr(CO)3H and Co(dmgBF2)2(H2O)2 can catalyze radical cyclizations. However, both have significant draw backs. In an effort to improve the catalytic efficiency of these reactions we have studied several potential catalyst candidates to test their viability as radical cyclization catalysts. I investigate the hydride CpFe(CO)2H (FpH). FpH has been shown to transfer hydrogen atoms to dienes and styrenes. I measured the Fe–H bond dissociation free energy (BDFE) to be 63 kcal/mol (much higher than previously thought) and showed that this hydride is not a good candidate for catalytic radical cyclizations. -
Dr. Soumendu Bisoi Assistant Professor Department of Chemistry, Narajole Raj College
Dr. Soumendu Bisoi Assistant Professor Department of Chemistry, Narajole Raj College Vitamin C Vitamin C, also named as L-ascorbic acid (Asc), is a water-soluble vitamin that is essential for humans, non-human primates and a few other mammals. Vitamin C (L-ascorbic acid; Asc) is a powerful antioxidant and essential human nutrient that has extensive industrial and medicinal applications resulting in global requirements estimated at 154 thousand tons in 2007. The discovery of Asc is related with the disease of scurvy. Scurvy was a common disease in the world’s navies and sailors until the beginning of the nineteenth century, with serious symptoms such as bleeding of mucous membranes, anaemia and eventually death. In 1928, Albert Szent-Gyørgyi first isolated the Asc from adrenal glands and called it hexuronic acid. Four years later, Charles Glen King isolated Asc in his laboratory and concluded that it was the same as hexuronic acid. In 1933, Norman Haworth deduced the chemical structure of Asc (Figure 1). Figure 1 Vitamin C (L-ascorbic acid). Between 1933 and 1934, not only Haworth and fellow British chemist Edmund Hirsthad synthesised Asc, but also, independently, the Polish chemist Tadeus Reichstein, succeeded in synthesising the vitamin in bulk, making it the first vitamin to be artificially produced. The latter process made possible the cheap mass-production of semi-synthetic Asc, which was quickly marketed. Haworth was awarded the 1937 Nobel Prize in Chemistry in part for this work, but the Reichstein process, a combined chemical and bacterial fermentation sequence still used today to produce vitamin C, retained Reichstein’s name. -
Synthesis and Characterization of New Metal-Carbon Catalysts for Hydrogenation of D-Glucose
SYNTHESIS AND CHARACTERIZATION OF NEW METAL-CARBON CATALYSTS FOR HYDROGENATION OF D-GLUCOSE LIU JIAJIA NATIONAL UNIVERSITY OF SINGAPORE 2010 SYNTHESIS AND CHARACTERIZATION OF NEW METAL-CARBON CATALYSTS FOR HYDROGENATION OF D-GLUCOSE LIU JIAJIA (M.Eng, Tianjin University) A THESIS SUBMITTED FOR THE DEGREE OF DOCTOR OF PHILOSOPHY DEPARTMENT OF CHEMICAL AND BIOMOLECULAR ENGINEERING NATIONAL UNIVERSITY OF SINGAPORE 2010 Acknowledgement Acknowledgement I am heartily thankful to my supervisor, Assoc. Prof. Zhao X. S., George, whose constant encouragement, invaluable guidance, patience and support throughout the whole period of my PhD candidature. I would also like to thank Assoc. Prof. Zhao for his guidance on writing scientific papers including this PhD thesis. In addition, I want to express my sincerest appreciation to the Department of Chemical and Biomolecular Engineering for offering me the chance to study at NUS with a scholarship. It’s my pleasure to work with a group of brilliant, warmhearted and lovely people. Wish all my lab mates go well with their work. Particular acknowledgement goes to Dr. Liu Tao, Mr. Chia Phai Ann, Mr. Shang Zhenhua, Dr. Yuan Zeliang, Mr. Mao Ning, Mr. Liu Zhicheng, Dr. Rajarathnam D., Madam Chow Pek Jaslyn, Mdm Fam Hwee Koong Samantha, Ms Lee Chai Keng, Ms Tay Choon Yen, Mr. Toh Keng Chee, Mr. Chun See Chong, Ms. Ng Ai Mei, Ms. Lum Mei Peng Sharon, and Ms. How Yoke Leng Doris for their kind supports. I thank my parents and my husband. It is no exaggeration to say that I could not complete the PhD work without their generous help, boundless love, encouragement and support. -
Ethoxylation of Fatty Acids
S B N P Enzymatic Synthesis & Functional Characterization Fredrik Viklund Department of Biotechnology Stockholm Royal Institute of Technology Surfactants based on natural products — Enzymatic synthesis and functional characterization Copyright © by Fredrik Viklund ISBN --- is is the electronic version of the thesis. Compared to the printed version, it includes some minor typographical corrections. Royal Institute of Technology Printed in Stockholm AlbaNova University Center May Department of Biotechnology SE- Stockholm, Sweden Universitetsservice AB http://www.biotech.kth.se/ http://www.us-ab.se/ To Explorers Sammanfattning Tensider är molekyler som består av en vattenlöslig och en fettlöslig del. De spelar en viktig roll i produkter som rengöringsmedel, kosmetika, läkemedel och mat såväl som i många industriella processer. Tensider används i mycket stor skala vilket gör det viktigt att minska deras påverkan på miljön. Det kan åstadkommas genom att använda naturprodukter som råvaror, genom att förbättra tillverkningsmetoderna och genom att minska användningen av begränsade resurser som energi och lösningsmedel. Den här avhandlingen behandlar lipaskatalyserad syntes av naturprodukts- baserade tensider. Den omfattar också studier av de framställda tensiderna; dels som antioxidanter i oljor, dels som tensider för att öka lösligheten av läkemedel. Omättade fettsyraestrar av askorbinsyra framställdes genom katalys med Candida antarctica lipas B i t-amylalkohol och i joniska vätskor. Höga utbyten av askorbyloleat erhölls i en jonisk vätska som formgivits för att öka lösligheten av fettsyran, när reaktionen kördes under vakuum. Vi fann att askorbyloleat är amorft och att det är en bättre antioxidant än askorbylpalmitat i rapsolja. Polyetylenglykol (PEG)-stearat, PEG -hydroxystearat och en rad PEG -acyloxy-stearater framställdes i en vakuumdriven och lösningsmedels- fri uppställning med lipas B från C. -
(12) United States Patent (10) Patent No.: US 6,610,863 B2 Arumugam Et Al
USOO6610863B2 (12) United States Patent (10) Patent No.: US 6,610,863 B2 Arumugam et al. (45) Date of Patent: Aug. 26, 2003 (54) CONTINUOUS PROCESS FOR PRODUCING DE 199 04 821 C1, 7/2000 L-ASCORBIC ACID EP O554090 A2 4/1983 EP 1 048 663 A1 11/2000 (75) Inventors: Bhaskar Krishna Arumugam, SE 1. is : 3.3. Kingsport, TN (US); Nick Allen GB 2O34 315 * 6/1980 Collins, Fall Branch, TN (US); JP 73015931 5/1973 Transito Lynne Macias, Petal, MS WO WO 87/0O839 2/1987 (US); Steven Thomas Perri, Kingsport, WO WO 97/13761 4/1997 TN (US); Jeffrey Earl Grant Powell, WO WO 99/07691 2/1999 Blountville, TN (US); Chester Wayne WO WOOO46216 8/2000 Sink, Kingsport, TN (US); Michael Roy Cushman, Punta Gorda, FL (US) OTHER PUBLICATIONS Anderson, S. et al., Production of 2-Keto-L-Gulonate, an (73) Assignee: Eastman Chemical Company, Intermediate in L-AScorbate Synthesis, by a Genetically Kingsport, TN (US) Modified Erwinia herbicola, Science, 230, pp. 144-149, 1985. (*) Notice: Subject to any disclaimer, the term of this Regna, P.P. et al., Kinetics of Transformation of 2-Keto patent is extended or adjusted under 35 polyhydroxy Acids, J. Am. Chem. Soc., 66, pp. 246-250, U.S.C. 154(b) by 0 days. 1944. Reichstein, T. et al., Eine ergiebige Synthese der 1-AScorb (21) Appl. No.: 10/037,126 ins?ure (C-Vitamine)) Helv. Chim. Acta, 17, pp. 311-328, 1934 * See Information Disclosure Statement for Descrip (22) Filed: Dec. 21, 2001 tion. (65) Prior Publication Data Saito, Y., Direct Fermentation of 2-Keto-L-Gulonic Acid in Recombinant Gluconobacter Oxydans, Biotechnol. -
Transition Metal Hydrides
Transition Metal Hydrides Biomimetic Studies and Catalytic Applications Jesper Ekström Stockholm University © Jesper Ekström, Stockholm 2007 ISBN 978-91-7155-539-7 Printed in Sweden by US-AB, Stockholm 2007 Distributor: Department of Organic Chemistry ‘Var som en anka brukade min mamma alltid säga. Håll dig lugn på ytan, och paddla utav bara helvete därunder.’ Michael Caine Abstract In this thesis, studies of the nature of different transition metal-hydride com- plexes are described. The first part deals with the enantioswitchable behav- iour of rhodium complexes derived from amino acids, applied in asymmetric transfer hydrogenation of ketones. We found that the use of amino acid thio amide ligands resulted in the formation of the R-configured product, whereas the use of the corresponding hydroxamic acid- or hydrazide ligands selec- tively gave the S-alcohol. Structure/activity investigations revealed that the stereochemical outcome of the catalytic reaction depends on the ligand mode of coordination. In the second part, an Fe hydrogenase active site model complex with a la- bile amine ligand has been synthesized and studied. The aim of this study was to find a complex that efficiently catalyzes the reduction of protons to molecular hydrogen under mild conditions. We found that the amine ligand functions as a mimic of the loosely bound ligand which is part of the active site in the hydrogenase. Further, an Fe hydrogenase active site model complex has been coupled to a photosensitizer with the aim of achieving light induced hydrogen production. The redox properties of the produced complex are such that no electron transfer from the photosensitizer part to the Fe moiety occurs. -
The Organic Chemistry of Drug Synthesis
The Organic Chemistry of Drug Synthesis VOLUME 2 DANIEL LEDNICER Mead Johnson and Company Evansville, Indiana LESTER A. MITSCHER The University of Kansas School of Pharmacy Department of Medicinal Chemistry Lawrence, Kansas A WILEY-INTERSCIENCE PUBLICATION JOHN WILEY AND SONS, New York • Chichester • Brisbane • Toronto Copyright © 1980 by John Wiley & Sons, Inc. All rights reserved. Published simultaneously in Canada. Reproduction or translation of any part of this work beyond that permitted by Sections 107 or 108 of the 1976 United States Copyright Act without the permission of the copyright owner is unlawful. Requests for permission or further information should be addressed to the Permissions Department, John Wiley & Sons, Inc. Library of Congress Cataloging in Publication Data: Lednicer, Daniel, 1929- The organic chemistry of drug synthesis. "A Wiley-lnterscience publication." 1. Chemistry, Medical and pharmaceutical. 2. Drugs. 3. Chemistry, Organic. I. Mitscher, Lester A., joint author. II. Title. RS421 .L423 615M 91 76-28387 ISBN 0-471-04392-3 Printed in the United States of America 10 987654321 It is our pleasure again to dedicate a book to our helpmeets: Beryle and Betty. "Has it ever occurred to you that medicinal chemists are just like compulsive gamblers: the next compound will be the real winner." R. L. Clark at the 16th National Medicinal Chemistry Symposium, June, 1978. vii Preface The reception accorded "Organic Chemistry of Drug Synthesis11 seems to us to indicate widespread interest in the organic chemistry involved in the search for new pharmaceutical agents. We are only too aware of the fact that the book deals with a limited segment of the field; the earlier volume cannot be considered either comprehensive or completely up to date. -
Chemistry: Human Activity, Chemical Reactivity
Chemistry: Human Activity, Chemical chapters. For example, the chapter on carbon com- Reactivity pounds starts with a case study of methane clathrates, Peter Mahaffy, Roy Tasker, Bob Bucat, John C. and that on chemical reactions and energy, with a Kotz, Gabriela C. Weaver, Paul M. Treichel, John E. case study of hydrogen as a fuel. The more obviously McMurry organic chapters use contexts from pharmaceuticals Nelson Education Ltd., 2010 or biological chemistry, with case studies on curing ISBN-13: 978-0-17660-625-1 and death and dying in the aromatics compounds ISBN-10: 0176606254 chapter, and a case study on the discovery of penicillin in the carbonyl compound chapter. These case studies are fascinating and a useful resource in themselves, reviewed by Tina L. Overton and I looked forward to each one. It is perhaps a little unfortunate that the first two are about drug abuse, There are many general chemistry textbooks on the and that some potential adopters may be prudish market and they all almost inevitably cover similar enough to be put off by that. But in each case the content. Academic staff choose these books for topics are discussed in their scientific context, and in their undergraduate students based on many crite- a way that helps us to appreciate (in these cases) the ria; level, detailed content, layout, design, chapter power of analytical techniques. order, habit, etc. Chemistry: Human Activity, Chemical The case studies are not the only place that Reactivity may give academics additional criteria the essential importance of chemistry is discussed. to consider. The book is authored by a well-known Real-life context is embedded within the text, often team of chemical educators who in a way that encourages stu- have a particular passion for rep- dents to think about how we know resenting chemistry visually, using what we know, and that demon- electronic resources to enhance strates the scientific method effec- conceptual understanding, and for tively. -
Crystal Structures and Properties of Iron Hydrides at High Pressure
Crystal Structures and Properties of Iron Hydrides at High Pressure Niloofar Zarifi,y Tiange Bi,y Hanyu Liu,z,{ and Eva Zurek∗,y yDepartment of Chemistry, State University of New York at Buffalo, Buffalo, NY 14260-3000, USA zInnovation Center for Computational Physics Method and Software, College of Physics, Jilin University, Changchun 130012, China {State Key Laboratory of Superhard Materials, College of Physics, Jilin University, Changchun 130012, China E-mail: [email protected] arXiv:1809.08323v1 [cond-mat.supr-con] 21 Sep 2018 1 Abstract Evolutionary algorithms and the particle swarm optimization method have been used to predict stable and metastable high hydrides of iron between 150-300 GPa that have not been discussed in previous studies. Cmca FeH5, P mma FeH6 and P 2=c FeH6 contain hydro- genic lattices that result from slight distortions of the previously predicted I4=mmm FeH5 and Cmmm FeH6 structures. Density functional theory calculations show that neither the I4=mmm nor the Cmca symmetry FeH5 phases are superconducting. A P 1 symmetry FeH7 phase, which is found to be dynamically stable at 200 and 300 GPa, adds another member to the set of predicted nonmetallic transition metal hydrides under pressure. Two metastable phases of FeH8 are found, and the preferred structure at 300 GPa contains a unique 1-dimensional hydrogenic lattice. 2 Introduction The composition and structure that hydrides of iron may assume under pressure has long been of interest to geoscientists. Seismic models suggest that the Earth’s core consists of iron alloyed with nickel and numerous light elements, one of which is suspected to be hydrogen.1 More recently, however, it was proposed that such systems may be a route towards high density bulk atomic hy- drogen.2 The allure of high temperature superconductivity in compressed high hydrides3–6 has been heightened with the discovery of superconductivity below 203 K in a sample of hydrogen sulfide that was compressed to 150 GPa,7 and most recently in studies of the lanthanum/hydrogen 8,9 system . -
Studies on Catalytic Mechanism of [Fe]- Hydrogenase from Methanogenic Archaea Based on Crystal Structures
Studies on catalytic mechanism of [Fe]- hydrogenase from methanogenic archaea based on crystal structures DISSERTATION zur Erlangung des Doktorgrades der Naturwissenschaften (Dr. rer. nat.) dem Fachbereich Biologie der Philipps-Universität Marburg Vorgelegt von Gangfeng Huang aus Shaoxing, China Marburg/Lahn, Deutschland, 2019 Die Untersuchungen zur vorliegenden Arbeit wurden in der Zeit von September 2015 bis Juni 2019 am Max-Planck-Institut für terrestrische Mikrobiologie in Marburg/Lahn unter der Leitung von Dr. Seigo Shima durchgeführt. Vom Fachbereich Biologie der Philipps-Universität in Marburg/Lahn als Dissertation angenommen am: Erstgutachter: Dr. Seigo Shima Zweitgutachter: Prof. Dr. Johann Heider Tag der mündlichen Prüfung: ERKLÄRUNG Hiermit versichere ich, dass ich meine Dissertation mit dem Titel "Studies on catalytic mechanism of [Fe]-hydrogenase from methanogenic archaea based on crystal structures " selbständig und ohne unerlaubte Unterstützung angefertigt und mich dabei keiner anderen als der von mir ausdrücklich bezeichneten Quellen und Hilfen bedient habe. Die Dissertation wurde weder in der jetzigen noch in einer ähnlichen Form bei einer anderen Hochschule eingereicht und hat keinen sonstigen Prüfungszwecken gedient. Marburg, den 03.2019 Gangfeng Huang Publications Part of this dissertation was published as below: 1. Huang G, Wagner T, Ermler U, Bill E, Ataka K, Shima S. Dioxygen sensitivity of [Fe]-hydrogenase in the presence of reducing substrates. Angew. Chem. Int. Ed. 2018, 57: 4917-4920. 2. Wagner T*, Huang G*, Ermler U, Shima S. How [Fe]-hydrogenase from Methanothermobacter is protected against light and oxidative stress. Angew. Chem. Int. Ed. 2018, 57: 15056-15059. 3. Huang G*, Wagner T*, Wodrich M, Ataka K, Bill E, Ermler U, Hu X, Shima S. -
Interplay of Hemilability and Redox Activity in Models of Hydrogenase Active Sites
Interplay of hemilability and redox activity in models PNAS PLUS of hydrogenase active sites Shengda Dinga, Pokhraj Ghosha, Marcetta Y. Darensbourga, and Michael B. Halla,1 aDepartment of Chemistry, Texas A&M University, College Station, TX 77843 Edited by Brian M. Hoffman, Northwestern University, Evanston, IL, and approved October 6, 2017 (received for review June 12, 2017) The hydrogen evolution reaction, as catalyzed by two electro- the arrangement shown in Fig. 1B, finding a thiol proton nearby + + + catalysts [M(N2S2)·Fe(NO)2] ,[Fe-Fe] (M = Fe(NO)) and [Ni-Fe] a hydride accommodated in a bridge position between Ni and Fe (M = Ni) was investigated by computational chemistry. As nominal (17), remarkably predicted by density functional theory (DFT) models of hydrogenase active sites, these bimetallics feature two calculations two decades ago (9, 10). Thus, in both hydrogenases kinds of actor ligands: Hemilabile, MN2S2 ligands and redox-active, the hydride-protonation mechanism (HP, also known as het- nitrosyl ligands, whose interplay guides the H2 production mech- erolytic coupling) accounts for H2 production (3). anism. The requisite base and metal open site are masked in the Interestingly, while the major function of nitrogenase (N2-ase) is resting state but revealed within the catalytic cycle by cleavage of nitrogen fixation, it is known that a molecule of H2 is an obligatory – the MS Fe(NO)2 bond from the hemilabile metallodithiolate li- side product as one molecule of N isfixedintoNH (18). Four + 2 3 gand. Introducing two electrons and two protons to [Ni-Fe] pro- equivalents of electrons and four protons are required before the duces H2 from coupling a hydride temporarily stored on Fe(NO)2 H2 is released and the N2 is initially fixed (19, 20); this is Nature’s (Lewis acid) and a proton accommodated on the exposed sulfur of creative mechanism whereby the N2-ase active site can build up – the MN2S2 thiolate (Lewis base). -
THE STEREOCHEMISTRY of the CATALYTIC HYDROGENATION of Compounds Containing an a S M E T R Ic CARBON ATOM
THE STEREOCHEMISTRY OF THE CATALYTIC HYDROGENATION of compounds containing an a s m e t r ic CARBON ATOM By TERENCE JOHN HOWARD A T hesis submitted to the University of London for the Degree of Doctor of Philosophy in th e Faculty of Science The Organic Research Laboratories, Battersea College of Technology, Sept. i 960 London, S.W .ll. ProQuest Number: 10804653 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. uest ProQuest 10804653 Published by ProQuest LLC(2018). Copyright of the Dissertation is held by the Author. All rights reserved. This work is protected against unauthorized copying under Title 17, United States Code Microform Edition © ProQuest LLC. ProQuest LLC. 789 East Eisenhower Parkway P.O. Box 1346 Ann Arbor, Ml 4 8 1 0 6 - 1346 2 ABSTRACT OF THESIS 4-Phenyl pen t-3-en-2--one has been prepared by the reaction of dimethyl cadmium with j3~methylcinnamoyl chloride, and its structure confirmed by a haloform degradation to trans - Q - methylcinnamic acid. Reduction of the ketone with aluminium isopropoxide gave (i)-4“Pbenylpent-3-en~2~ol, characterised by the preparation of the 3J-a-naphthyl and R-4-diphenylyl-carbamates. On catalytic hydrogenation (-)-4“-phenylpent-3-en-2--ol gave a mixture of the two diastereoisomeric racemates of (-)~4~phenylpentan-2-ol in which a new centre of asymmetry has been generated at C^.