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Towards an Understanding of the Evolution of Violaceae from an Anatomical and Morphological Perspective Saul Ernesto Hoyos University of Missouri-St
University of Missouri, St. Louis IRL @ UMSL Theses Graduate Works 8-7-2011 Towards an understanding of the evolution of Violaceae from an anatomical and morphological perspective Saul Ernesto Hoyos University of Missouri-St. Louis, [email protected] Follow this and additional works at: http://irl.umsl.edu/thesis Recommended Citation Hoyos, Saul Ernesto, "Towards an understanding of the evolution of Violaceae from an anatomical and morphological perspective" (2011). Theses. 50. http://irl.umsl.edu/thesis/50 This Thesis is brought to you for free and open access by the Graduate Works at IRL @ UMSL. It has been accepted for inclusion in Theses by an authorized administrator of IRL @ UMSL. For more information, please contact [email protected]. Saul E. Hoyos Gomez MSc. Ecology, Evolution and Systematics, University of Missouri-Saint Louis, 2011 Thesis Submitted to The Graduate School at the University of Missouri – St. Louis in partial fulfillment of the requirements for the degree Master of Science July 2011 Advisory Committee Peter Stevens, Ph.D. Chairperson Peter Jorgensen, Ph.D. Richard Keating, Ph.D. TOWARDS AN UNDERSTANDING OF THE BASAL EVOLUTION OF VIOLACEAE FROM AN ANATOMICAL AND MORPHOLOGICAL PERSPECTIVE Saul Hoyos Introduction The violet family, Violaceae, are predominantly tropical and contains 23 genera and upwards of 900 species (Feng 2005, Tukuoka 2008, Wahlert and Ballard 2010 in press). The family is monophyletic (Feng 2005, Tukuoka 2008, Wahlert & Ballard 2010 in press), even though phylogenetic relationships within Violaceae are still unclear (Feng 2005, Tukuoka 2008). The family embrace a great diversity of vegetative and floral morphologies. Members are herbs, lianas or trees, with flowers ranging from strongly spurred to unspurred. -
SURINAME: COUNTRY REPORT to the FAO INTERNATIONAL TECHNICAL CONFERENCE on PLANT GENETIC RESOURCES (Leipzig,1996)
S U R I N A M E c o u n t r y r e p o r t 1 SURINAME: COUNTRY REPORT TO THE FAO INTERNATIONAL TECHNICAL CONFERENCE ON PLANT GENETIC RESOURCES (Leipzig,1996) Prepared by: Ministry of Agriculture Animal Husbandry and Fisheries Paramaribo, May 31 1995 S U R I N A M E c o u n t r y r e p o r t 2 Note by FAO This Country Report has been prepared by the national authorities in the context of the preparatory process for the FAO International Technical Conference on Plant Genetic Resources, Leipzig, Germany, 17-23 June 1996. The Report is being made available by FAO as requested by the International Technical Conference. However, the report is solely the responsibility of the national authorities. The information in this report has not been verified by FAO, and the opinions expressed do not necessarily represent the views or policy of FAO. The designations employed and the presentation of the material and maps in this document do not imply the expression of any option whatsoever on the part of the Food and Agriculture Organization of the United Nations concerning the legal status of any country, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. S U R I N A M E c o u n t r y r e p o r t 3 Table of contents CHAPTER 1 INTRODUCION TO SURINAME AND ITS AGRICULTURAL SECTOR 5 1.1 GEOGRAPHY AND POPULATION 5 1.2 CLIMATE AND GEOMORPHOLOGICAL LAND-DIVISION 6 1.2.1 Agriculture 7 CHAPTER 2 INDIGENOUS PLANT GENETIC RESOURCES 9 2.1 FORESTRY GENETIC RESOURCES 9 2.2 AGRICULTURAL PLANT GENETIC RESOURCES 10 2.2.1 Ananas -
Well-Known Plants in Each Angiosperm Order
Well-known plants in each angiosperm order This list is generally from least evolved (most ancient) to most evolved (most modern). (I’m not sure if this applies for Eudicots; I’m listing them in the same order as APG II.) The first few plants are mostly primitive pond and aquarium plants. Next is Illicium (anise tree) from Austrobaileyales, then the magnoliids (Canellales thru Piperales), then monocots (Acorales through Zingiberales), and finally eudicots (Buxales through Dipsacales). The plants before the eudicots in this list are considered basal angiosperms. This list focuses only on angiosperms and does not look at earlier plants such as mosses, ferns, and conifers. Basal angiosperms – mostly aquatic plants Unplaced in order, placed in Amborellaceae family • Amborella trichopoda – one of the most ancient flowering plants Unplaced in order, placed in Nymphaeaceae family • Water lily • Cabomba (fanwort) • Brasenia (watershield) Ceratophyllales • Hornwort Austrobaileyales • Illicium (anise tree, star anise) Basal angiosperms - magnoliids Canellales • Drimys (winter's bark) • Tasmanian pepper Laurales • Bay laurel • Cinnamon • Avocado • Sassafras • Camphor tree • Calycanthus (sweetshrub, spicebush) • Lindera (spicebush, Benjamin bush) Magnoliales • Custard-apple • Pawpaw • guanábana (soursop) • Sugar-apple or sweetsop • Cherimoya • Magnolia • Tuliptree • Michelia • Nutmeg • Clove Piperales • Black pepper • Kava • Lizard’s tail • Aristolochia (birthwort, pipevine, Dutchman's pipe) • Asarum (wild ginger) Basal angiosperms - monocots Acorales -
Outline of Angiosperm Phylogeny
Outline of angiosperm phylogeny: orders, families, and representative genera with emphasis on Oregon native plants Priscilla Spears December 2013 The following listing gives an introduction to the phylogenetic classification of the flowering plants that has emerged in recent decades, and which is based on nucleic acid sequences as well as morphological and developmental data. This listing emphasizes temperate families of the Northern Hemisphere and is meant as an overview with examples of Oregon native plants. It includes many exotic genera that are grown in Oregon as ornamentals plus other plants of interest worldwide. The genera that are Oregon natives are printed in a blue font. Genera that are exotics are shown in black, however genera in blue may also contain non-native species. Names separated by a slash are alternatives or else the nomenclature is in flux. When several genera have the same common name, the names are separated by commas. The order of the family names is from the linear listing of families in the APG III report. For further information, see the references on the last page. Basal Angiosperms (ANITA grade) Amborellales Amborellaceae, sole family, the earliest branch of flowering plants, a shrub native to New Caledonia – Amborella Nymphaeales Hydatellaceae – aquatics from Australasia, previously classified as a grass Cabombaceae (water shield – Brasenia, fanwort – Cabomba) Nymphaeaceae (water lilies – Nymphaea; pond lilies – Nuphar) Austrobaileyales Schisandraceae (wild sarsaparilla, star vine – Schisandra; Japanese -
Alphabetical Lists of the Vascular Plant Families with Their Phylogenetic
Colligo 2 (1) : 3-10 BOTANIQUE Alphabetical lists of the vascular plant families with their phylogenetic classification numbers Listes alphabétiques des familles de plantes vasculaires avec leurs numéros de classement phylogénétique FRÉDÉRIC DANET* *Mairie de Lyon, Espaces verts, Jardin botanique, Herbier, 69205 Lyon cedex 01, France - [email protected] Citation : Danet F., 2019. Alphabetical lists of the vascular plant families with their phylogenetic classification numbers. Colligo, 2(1) : 3- 10. https://perma.cc/2WFD-A2A7 KEY-WORDS Angiosperms family arrangement Summary: This paper provides, for herbarium cura- Gymnosperms Classification tors, the alphabetical lists of the recognized families Pteridophytes APG system in pteridophytes, gymnosperms and angiosperms Ferns PPG system with their phylogenetic classification numbers. Lycophytes phylogeny Herbarium MOTS-CLÉS Angiospermes rangement des familles Résumé : Cet article produit, pour les conservateurs Gymnospermes Classification d’herbier, les listes alphabétiques des familles recon- Ptéridophytes système APG nues pour les ptéridophytes, les gymnospermes et Fougères système PPG les angiospermes avec leurs numéros de classement Lycophytes phylogénie phylogénétique. Herbier Introduction These alphabetical lists have been established for the systems of A.-L de Jussieu, A.-P. de Can- The organization of herbarium collections con- dolle, Bentham & Hooker, etc. that are still used sists in arranging the specimens logically to in the management of historical herbaria find and reclassify them easily in the appro- whose original classification is voluntarily pre- priate storage units. In the vascular plant col- served. lections, commonly used methods are systema- Recent classification systems based on molecu- tic classification, alphabetical classification, or lar phylogenies have developed, and herbaria combinations of both. -
A Visual Guide to Collecting Plant Tissues for DNA
A visual guide to collecting plant tissues for DNA Collecting kit checklist Silica gel1 Permanent marker and pencil Resealable bags, airtight plastic container Razor blade / Surgical scissors Empty tea bags or coffee filters Ethanol and paper tissue or ethanol wipes Tags or jewellers tags Plant press and collecting book 1. Selection and preparation of fresh plant tissue: Sampling avoided. Breaking up leaf material will bruise the plant tissue, which will result in enzymes being released From a single plant, harvest 3 – 5 mature leaves, or that cause DNA degradation. Ideally, leaf material sample a piece of a leaf, if large (Picture A). Ideally should be cut into smaller fragments with thick a leaf area of 5 – 10 cm2 should be enough, but this midribs being removed (Picture C). If sampling robust amount should be adjusted if the plant material is leaf tissue (e.g. cycads, palms), use a razor blade or rich in water (e.g. a succulent plant). If leaves are surgical scissors (Picture D). small (e.g. ericoid leaves), sample enough material to equate a leaf area of 5 – 10 cm2. If no leaves are Succulent plants available, other parts can be sampled such as leaf buds, flowers, bracts, seeds or even fresh bark. If the If the leaves are succulent, use a razor blade to plant is small, select the biggest specimen, but never remove epidermal slices or scoop out parenchyma combine tissues from different individuals. tissue (Picture E). Cleaning Ideally, collect clean fresh tissues, however if the leaf or plant material is dirty or shows potential contamination (e.g. -
Ethnobotany of Riverine Populations from the Rio Negro, Amazonia (Brazil)
Journal of Ethnobiology 27(1): 46–72 Spring/Summer 2007 ETHNOBOTANY OF RIVERINE POPULATIONS FROM THE RIO NEGRO, AMAZONIA (BRAZIL) ANDRE´ A LEME SILVA,a JORGE TAMASHIROb and ALPINA BEGOSSIc aDepartamento de Ecologia, Instituto de Biocieˆncias Universidade de Sa˜o Paulo, Sa˜o Paulo, Brazil, CEP 05580-900 ^[email protected]& bDepartamento de Botaˆnica, UNICAMP Campinas, Sa˜o Paulo, Brazil ^[email protected]& cFisheries and Food Institute, Rua Coronel Quirino 1636, Campinas, Sa˜o Paulo 13025-002, Brazil, and Fisheries Management and Training Program, PREAC-UNICAMP ^[email protected]& ABSTRACT.—This paper presents a comparative study of plant knowledge and use in rural and urban areas in the municipality of Barcelos in the Rio Negro, Amazonas, Brazil, based on a total of 81 interviews. Using diversity indices (Shannon-Wiener), plant knowledge is compared among communities (urban- rural population), and between sex (male-female) and age (older or younger than 40 years) categories within each community. Among our informants, we found quantitative differences concerning the knowledge of medicinal plants between sex and age categories. Some individuals play a key role relating to medicinal plant knowledge, and steps should be taken in order to include them in management and conservation plans. Key words: ethnobotany, diversity indices, plant knowledge and use, Rio Negro, Brazilian Amazon. RESUMO.—Com base em um total de 81 entrevistas, no´s apresentamos um estudo etnobotaˆnico comparativo entre populac¸o˜es urbanas e rurais na municipalidade de Barcelos no Rio Negro, Amazonas, Brasil. Usando´ ındices de diversidade (Shannon-Wiener), o conhecimento de plantas e´ comparado entre as comunidades estudadas (populac¸a˜o urbana e rural), geˆnero (masculino e feminino) e categorias de idade (menos que 40 anos e mais que 40 anos de idade). -
Chrysobalanaceae
A peer-reviewed open-access journal PhytoKeys A26: new 71–74 species (2013) of Licania (Chrysobalanaceae) from Cordillera del Cóndor, Ecuador 71 doi: 10.3897/phytokeys.26.4590 RESEARCH ARTICLE www.phytokeys.com Launched to accelerate biodiversity research A new species of Licania (Chrysobalanaceae) from Cordillera del Cóndor, Ecuador Ghillean T. Prance1 1 Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3AB, UK Corresponding author: Ghillean T. Prance ([email protected]) Academic editor: Peter Stevens | Received 27 December 2013 | Accepted 4 September 2013 | Published 27 September 2013 Citation: Prance GT (2013) A new species of Licania (Chrysobalanaceae) from Cordillera del Cóndor, Ecuador. PhytoKeys 26: 71–74. doi: 10.3897/phytokeys.26.4590 Abstract A new mid altitude species of the predominantly lowland genus Licania, L. condoriensis from Ecuador is described and illustrated. Keywords Chrysobalanaceae, Licania, Cordillera del Cóndor, Ecuador Introduction A worldwide monograph of the Chrysobalanaceae was published in 2003 (Prance and Sothers 2003a, b). Some recent collections from Ecuador made in 2005 are of an undescribed species of Licania. This genus of 218 species is predominantly a lowland one and all three collections of this new species, L. condoriensis, are from an altitude of over 1,100 m. Table 1 lists 14 montane and submontane species of Licania that occur mainly at altitudes of over one thousand metres. Copyright Ghillean T. Prance. This is an open access article distributed under the terms of the Creative Commons Attribution License 3.0 (CC- BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. -
Evolutionary History of Floral Key Innovations in Angiosperms Elisabeth Reyes
Evolutionary history of floral key innovations in angiosperms Elisabeth Reyes To cite this version: Elisabeth Reyes. Evolutionary history of floral key innovations in angiosperms. Botanics. Université Paris Saclay (COmUE), 2016. English. NNT : 2016SACLS489. tel-01443353 HAL Id: tel-01443353 https://tel.archives-ouvertes.fr/tel-01443353 Submitted on 23 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. NNT : 2016SACLS489 THESE DE DOCTORAT DE L’UNIVERSITE PARIS-SACLAY, préparée à l’Université Paris-Sud ÉCOLE DOCTORALE N° 567 Sciences du Végétal : du Gène à l’Ecosystème Spécialité de Doctorat : Biologie Par Mme Elisabeth Reyes Evolutionary history of floral key innovations in angiosperms Thèse présentée et soutenue à Orsay, le 13 décembre 2016 : Composition du Jury : M. Ronse de Craene, Louis Directeur de recherche aux Jardins Rapporteur Botaniques Royaux d’Édimbourg M. Forest, Félix Directeur de recherche aux Jardins Rapporteur Botaniques Royaux de Kew Mme. Damerval, Catherine Directrice de recherche au Moulon Président du jury M. Lowry, Porter Curateur en chef aux Jardins Examinateur Botaniques du Missouri M. Haevermans, Thomas Maître de conférences au MNHN Examinateur Mme. Nadot, Sophie Professeur à l’Université Paris-Sud Directeur de thèse M. -
Full of Beans: a Study on the Alignment of Two Flowering Plants Classification Systems
Full of beans: a study on the alignment of two flowering plants classification systems Yi-Yun Cheng and Bertram Ludäscher School of Information Sciences, University of Illinois at Urbana-Champaign, USA {yiyunyc2,ludaesch}@illinois.edu Abstract. Advancements in technologies such as DNA analysis have given rise to new ways in organizing organisms in biodiversity classification systems. In this paper, we examine the feasibility of aligning two classification systems for flowering plants using a logic-based, Region Connection Calculus (RCC-5) ap- proach. The older “Cronquist system” (1981) classifies plants using their mor- phological features, while the more recent Angiosperm Phylogeny Group IV (APG IV) (2016) system classifies based on many new methods including ge- nome-level analysis. In our approach, we align pairwise concepts X and Y from two taxonomies using five basic set relations: congruence (X=Y), inclusion (X>Y), inverse inclusion (X<Y), overlap (X><Y), and disjointness (X!Y). With some of the RCC-5 relationships among the Fabaceae family (beans family) and the Sapindaceae family (maple family) uncertain, we anticipate that the merging of the two classification systems will lead to numerous merged solutions, so- called possible worlds. Our research demonstrates how logic-based alignment with ambiguities can lead to multiple merged solutions, which would not have been feasible when aligning taxonomies, classifications, or other knowledge or- ganization systems (KOS) manually. We believe that this work can introduce a novel approach for aligning KOS, where merged possible worlds can serve as a minimum viable product for engaging domain experts in the loop. Keywords: taxonomy alignment, KOS alignment, interoperability 1 Introduction With the advent of large-scale technologies and datasets, it has become increasingly difficult to organize information using a stable unitary classification scheme over time. -
Chrysobalanaceae: Traditional Uses, Phytochemistry and Pharmacology Evanilson Alves Feitosa Et Al
Revista Brasileira de Farmacognosia Brazilian Journal of Pharmacognosy Chrysobalanaceae: traditional uses, 22(5): 1181-1186, Sep./Oct. 2012 phytochemistry and pharmacology Evanilson Alves Feitosa,1 Haroudo Satiro Xavier,1 Karina Perrelli Randau*,1 Laboratório de Farmacognosia, Universidade Federal de Pernambuco, Brazil. Review Abstract: Chrysobalanaceae is a family composed of seventeen genera and about 525 species. In Africa and South America some species have popular indications Received 16 Jan 2012 for various diseases such as malaria, epilepsy, diarrhea, infl ammations and diabetes. Accepted 25 Apr 2012 Despite presenting several indications of popular use, there are few studies confi rming Available online 14 Jun 2012 the activities of these species. In the course of evaluating the potential for future studies, the present work is a literature survey on databases of the botanical, chemical, Keywords: biological and ethnopharmacological data on Chrysobalanaceae species published Hirtella since the fi rst studies that occurred in the 60’s until the present day. Licania Parinari botany ethnopharmacology ISSN 0102-695X http://dx.doi.org/10.1590/S0102- 695X2012005000080 Introduction Small fl owers usually greenish-white, cyclic, zigomorphic, diclamides, with a developed receptacle, sepals and petals Chrysobalanaceae was fi rst described by the free, general pentamers, androecium consists of two botanist Robert Brown in his study “Observations, stamens to many free or more or less welded together; systematical and geographical, on the herbarium collected superomedial ovary, bi to tricarpellate, unilocular, usually by Professor Christian Smith, in the vicinity of the Congo, with only one ovule and fruit usually drupaceous. In the during the expedition to explore that river, under the Brazilian Cerrado and in the Amazonian forests trees from command of Captain Tuckey, in the year 1816” (Salisbury, the species of the genus Licania can be found. -
Bilirubin: an Animal Pigment in the Zingiberales and Diverse Angiosperm Orders Cary L
Florida International University FIU Digital Commons FIU Electronic Theses and Dissertations University Graduate School 11-5-2010 Bilirubin: an Animal Pigment in the Zingiberales and Diverse Angiosperm Orders Cary L. Pirone Florida International University, [email protected] DOI: 10.25148/etd.FI10122201 Follow this and additional works at: https://digitalcommons.fiu.edu/etd Part of the Biochemistry Commons, and the Botany Commons Recommended Citation Pirone, Cary L., "Bilirubin: an Animal Pigment in the Zingiberales and Diverse Angiosperm Orders" (2010). FIU Electronic Theses and Dissertations. 336. https://digitalcommons.fiu.edu/etd/336 This work is brought to you for free and open access by the University Graduate School at FIU Digital Commons. It has been accepted for inclusion in FIU Electronic Theses and Dissertations by an authorized administrator of FIU Digital Commons. For more information, please contact [email protected]. FLORIDA INTERNATIONAL UNIVERSITY Miami, Florida BILIRUBIN: AN ANIMAL PIGMENT IN THE ZINGIBERALES AND DIVERSE ANGIOSPERM ORDERS A dissertation submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in BIOLOGY by Cary Lunsford Pirone 2010 To: Dean Kenneth G. Furton College of Arts and Sciences This dissertation, written by Cary Lunsford Pirone, and entitled Bilirubin: An Animal Pigment in the Zingiberales and Diverse Angiosperm Orders, having been approved in respect to style and intellectual content, is referred to you for judgment. We have read this dissertation and recommend that it be approved. ______________________________________ Bradley C. Bennett ______________________________________ Timothy M. Collins ______________________________________ Maureen A. Donnelly ______________________________________ John. T. Landrum ______________________________________ J. Martin Quirke ______________________________________ David W. Lee, Major Professor Date of Defense: November 5, 2010 The dissertation of Cary Lunsford Pirone is approved.