Cole, ES, LA Hahn, J Choquette, and M Thacker. Natural History Characteristics of Synaptula Hydriformis, An
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The Distribution of Sea Cucumbers in Pulau Aur, Johore, Title Malaysia
The Distribution of Sea Cucumbers in Pulau Aur, Johore, Title Malaysia Author(s) ZULFIGAR, YASIN; SIM, Y.K.; AILEEN TAN, S. H. Publications of the Seto Marine Biological Laboratory. Special Citation Publication Series (2007), 8: 73-86 Issue Date 2007 URL http://hdl.handle.net/2433/70908 Right Type Departmental Bulletin Paper Textversion publisher Kyoto University THE NAGISA WORLD CONGRESS: 73-86, 2007 The Distribution of Sea Cucumbers in Pulau Aur, Johore, Malaysia YASIN ZULFIGAR*, Y.K. SIM and S. H. AILEEN TAN Muka Head Marine Research Station, Centre for Marine & Coastal Studies, School of Biological Sciences, Universiti Sains Malaysia, 11800 Minden, Penang, Malaysia Corresponding author’s e-mail: [email protected] Abstract Sea cucumbers have been harvested for centuries for human consumption. The high value of some species, the ease with which such shallow water organisms can be harvested, and their vulnerable nature due to their biology, population dynamics and habitat preferences have all contributed to overexploitation and the collapse of fisheries in some locations in Malaysia. Sea cucumbers are susceptible to overexploitation due to their late maturity, density-dependent reproduction, and low rates of recruitment. Although sea cucumbers are generally widely distributed, with some species occurring throughout entire ocean basins, most species have very specific zone within reef habitats. An investigation at the Pulau Aur group (about 65km east of mainland Mersing, Johore, Malaysia; in the Johor Marine Park) has been conducted using wandering transects to re-appraise the local holothuroid biodiversity pattern according to habitat and depth. Preliminary results show that three families, eight genera and 20 species of sea cucumbers were found in the 13 locations surveyed in Pulau Aur, Pulau Dayang, Pulau Lang and Pulau Pinang, during the survey from September 5~12, 2005. -
Community Structure, Diversity, and Distribution Patterns of Sea Cucumber
Community structure, diversity, and distribution patterns of sea cucumber (Holothuroidea) in the coral reef area of Sapeken Islands, Sumenep Regency, Indonesia 1Abdulkadir Rahardjanto, 2Husamah, 2Samsun Hadi, 1Ainur Rofieq, 2Poncojari Wahyono 1 Biology Education, Postgraduate Directorate, Universitas Muhammadiyah Malang, Malang, East Java, Indonesia; 2 Biology Education, Faculty of Teacher Training and Education, Universitas Muhammadiyah Malang, Malang, Indonesia. Corresponding author: A. Rahardjanto, [email protected] Abstract. Sea cucumbers (Holothuroidea) are one of the high value marine products, with populations under very critical condition due to over exploitation. Data and information related to the condition of sea cucumber communities, especially in remote islands, like the Sapeken Islands, Sumenep Regency, East Java, Indonesia, is still very limited. This study aimed to determine the species, community structure (density, frequency, and important value index), species diversity index, and distribution patterns of sea cucumbers found in the reef area of Sapeken Islands, using a quantitative descriptive study. This research was conducted in low tide during the day using the quadratic transect method. Data was collected by making direct observations of the population under investigation. The results showed that sea cucumbers belonged to 11 species, from 2 orders: Aspidochirotida, with the species Holothuria hilla, Holothuria fuscopunctata, Holothuria impatiens, Holothuria leucospilota, Holothuria scabra, Stichopus horrens, Stichopus variegates, Actinopyga lecanora, and Actinopyga mauritiana and order Apodida, with the species Synapta maculata and Euapta godeffroyi. The density ranged from 0.162 to 1.37 ind m-2, and the relative density was between 0.035 and 0.292 ind m-2. The highest density was found for H. hilla and the lowest for S. -
SPC Beche-De-Mer Information Bulletin #35 – March 2015
Secretariat of the Pacific Community ISSN 1025-4943 Issue 35 – March 2015 BECHE-DE-MER information bulletin Inside this issue Editorial Spatial sea cucumber management in th Vanuatu and New Caledonia The 35 issue of Beche-de-mer Information Bulletin has eight original M. Leopold et al. p. 3 articles, all very informative, as well as information about workshops and meetings that were held in 2014 and forthcoming 2015 conferences. The sea cucumbers (Echinodermata: Holothuroidea) of Tubbataha Reefs Natural Park, Philippines The first paper is by Marc Léopold, who presents a spatial management R.G. Dolorosa p. 10 strategy developed in Vanuatu and New Caledonia (p. 3). This study pro- vides interesting results on the type of approach to be developed to allow Species list of Indonesian trepang A. Setyastuti and P. Purwati p. 19 regeneration of sea cucumber resources and better management of small associated fisheries. Field observations of sea cucumbers in the north of Baa atoll, Maldives Species richness, size and density of sea cucumbers are investigated by F. Ducarme p. 26 Roger G. Dolorosa (p. 10) in the Tubbataha Reefs Natural Park, Philippines. Spawning induction and larval rearing The data complement the nationwide monitoring of wild populations. of the sea cucumber Holothuria scabra in Malaysia Ana Setyastuti and Pradina Purwati (p. 19) provide a list of all the species N. Mazlan and R. Hashim p. 32 included in the Indonesian trepang, which have ever been, and still are, Effect of nurseries and size of released being fished for trade. The result puts in evidence 54 species, of which 33 Holothuria scabra juveniles on their have been taxonomically confirmed. -
Chemical Defense Mechanisms and Ecological Implications of Indo-Pacific Holothurians
molecules Article Chemical Defense Mechanisms and Ecological Implications of Indo-Pacific Holothurians Elham Kamyab 1,* , Sven Rohde 1 , Matthias Y. Kellermann 1 and Peter J. Schupp 1,2,* 1 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, Schleusenstrasse 1, 26382 Wilhelmshaven, Germany; [email protected] (S.R.); [email protected] (M.Y.K.) 2 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg, Ammerländer Heerstrasse 231, D-26129 Oldenburg, Germany * Correspondence: [email protected] (E.K.); [email protected] (P.J.S.); Tel.: +49-4421-944-100 (P.J.S.) Academic Editor: David Popovich Received: 14 August 2020; Accepted: 13 October 2020; Published: 19 October 2020 Abstract: Sea cucumbers are slow-moving organisms that use morphological, but also a diverse combination of chemical defenses to improve their overall fitness and chances of survival. Since chemical defense compounds are also of great pharmaceutical interest, we pinpoint the importance of biological screenings that are a relatively fast, informative and inexpensive way to identify the most bioactive organisms prior to further costly and elaborate pharmacological screenings. In this study, we investigated the presence and absence of chemical defenses of 14 different sea cucumber species from three families (Holothuriidae, Stichopodidae and Synaptidae) against ecological factors such as predation and pathogenic attacks. We used the different sea cucumber crude extracts as well as purified fractions and pure saponin compounds in a portfolio of ecological activity tests including fish feeding assays, cytotoxicity tests and antimicrobial assays against environmental pathogenic and non-pathogenic bacteria. -
An Unconventional Flavivirus and Other RNA Viruses In
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 3 September 2020 doi:10.20944/preprints202009.0061.v1 1 Article 2 An Unconventional Flavivirus and other RNA 3 Viruses in the Sea Cucumber (Holothuroidea; 4 Echinodermata) Virome 5 Ian Hewson1*, Mitchell R. Johnson2, Ian R. Tibbetts3 6 1 Department of Microbiology, Cornell University; [email protected] 7 2 Department of Microbiology, Cornell University; [email protected] 8 3 School of Biological Sciences, University of Queensland; [email protected] 9 10 * Correspondence: [email protected]; Tel.: +1-607-255-0151 11 Abstract: Sea cucumbers (Holothuroidea; Echinodermata) are ecologically significant constituents 12 of benthic marine habitats. We surveilled RNA viruses inhabiting 8 species (representing 4 families) 13 of holothurian collected from four geographically distinct locations by viral metagenomics, 14 including a single specimen of Apostichopus californicus affected by a hitherto undocumented 15 wasting disease. The RNA virome comprised genome fragments of both single-stranded positive 16 sense and double stranded RNA viruses, including those assigned to the Picornavirales, Ghabrivirales, 17 and Amarillovirales. We discovered an unconventional flavivirus genome fragment which was most 18 similar to a shark virus. Ghabivirales-like genome fragments were most similar to fungal totiviruses 19 in both genome architecture and homology, and likely infected mycobiome constituents. 20 Picornavirales, which are commonly retrieved in host-associated viral metagenomes, were similar to 21 invertebrate transcriptome-derived picorna-like viruses. Sequence reads recruited from the grossly 22 normal A. californicus metavirome to nearly all viral genome fragments recovered from the wasting- 23 affected A. californicus. The greatest number of viral genome fragments was recovered from wasting 24 A. -
Adec Preview Generated PDF File
Records ofthe Western Australian Museum Supplement No. 66: 293-342 (2004). Echinoderms of the Dampier Archipelago, Western Auslralia Loisette M. Marsh* and Susan M. Morrison Department of Aquatic Zoology (Marine Invertebrates), Western Australian Museum Francis Street, Perth, Western Australia 6000, Australia email: *c/[email protected] [email protected] Abstract - The results of two diving surveys (DA1/98 and DA3/99) and a dredge survey (DA2/99) conducted in the waters of the Dampier Archipelago, Western Australia, are summarised. The diving surveys sampled 70 sites in the eastern (DA1/98) and western (DA3/99) halves of the Archipelago. Considerable differences were demonstrated between the echinoderm faunas of these areas, with more species (139) recorded in western than eastern (115) areas and only 74 species in common between the two. There are major habitat differences between the eastern and western parts of the archipelago, with more areas of soft substrate in the western part, providing more habitat for astropectinid starfishes and burrowing heart urchins. The dredging survey (DA2/99), which sampled 100 sites spread throughout the archipelago, showed that the area has an extremely rich echinoderm fauna, unmatched by any other in Western Australia. Fifty-two percent of the species taken by dredging were not found on the dive surveys. A complete list of all species found during the diving and dredging expeditions (260) and a supplementary list of material from the Dampier Archipelago held in the Western Australian Museum are presented, making a total of 286 species, the highest number recorded from any part of Western Australia. -
Community Structure of Echinoderms in Littoral Zone of the Red Sea Coast of Egypt
Egyptian Journal of Aquatic Biology & Fisheries Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt. ISSN 1110 – 6131 Vol. 22(5): 483 - 498 (2018) www.ejabf.journals.ekb.eg Community structure of Echinoderms in littoral zone of the Red Sea Coast of Egypt Aldoushy Mahdy1, Hamdy A. Omar2, Saif A. M. Nasser3,4, Khaleid F. Abd El-Wakeil3,*, Ahmad H. Obuid-Allah3 1- Department of Zoology, Faculty of Science, Al-Azhar University (Assiut Branch), Assiut 71524, Egypt 2- National Institute of Oceanography and Fisheries, Kayet Bay, Alexandria, Egypt. 3- Department of Zoology, Faculty of Science Assiut University, Egypt. 4- Department of Biology, Faculty of Educaion, Aden University, Yemen. * Corresponding author; E-mail: [email protected] ARTICLE INFO ABSTRACT Article History: The present work aimed to investigate Echinoderm communities in the Received: Dec. 2, 2018 Red Sea Coast of Egypt. A survey on Echinoderms done during the period Accepted:Dec. 30, 2018 between February 2016 to August 2017. Fourteen sites (42 locations) were Online: Jan. 2019 selected to represent all Egyptian Red Sea habitats (Seagrass, mangrove, _______________ coral reef, rocky, sandy and muddy shore). A total of 33 species of echinoderms belonging to 5 classes, 12 orders and 18 families were recorded. Keywords: The study revealed that the Eudominant species in this survey were: Echinoderms Ophiocoma scolopendrina, Diadema setosum, Echinometra mathaei and Red Sea Holothuria atra while the Dominant species included Linckia multifora, Seagrass Ophiolepis cincta and Tripneustes gratilla. Echinoderms community showed Suez Gulf different class and species composition in the investigated sites. Class Ras Mohamed Echinoidea recorded the highest percentage of species composition. -
Sea Cucumbers of American Samoa Sea Cucumbers of American Samoa
Sea Cucumbers of American Samoa Sea Cucumbers of American Samoa by the Marine Science Students of American Samoa Community College Spring 2008 Authors: Joseph Atafua Francis Leiato Alofaae Mamea Tautineia Passi American Samoa Community College Ephraim Temple, M.S. Scott Godwin, M.S. Malia Rivera, Ph.D. Editors i Preface During the spring 2008 semester, five students from the Marine Science Program at the American Samoa Community College, with support from the University of Hawai‘i Sea Grant Program, participated in an internship funded by the Hawai‘i Institute of Marine Biology through a partnership with the National Oceanic and Atmospheric Administration’s National Marine Sanctuary Program. These students participated in classroom and field exercises to learn the major taxa of marine invertebrates and practice near-shore surveying techniques. As a final project for the internship, students each selected several of the native sea cucumber species to produce an informational booklet. In it you will find general characteristics such as scientific and Samoan name, taxonomy, geographical range, and cultural significance. Species have been organized in alphabetical order by species name. Photos with permission from Dr. Gustav Paulay and Larry Madrigal. ii iii General Characteristics Name: Actinopyga echinites Sea cucumbers are one of the most important members of Order: Aspidochirotida sand and mud benthic communities. They belong to the Family: Holothuriidae phylum echinodermata (meaning spiny skin) making them Range: East Africa, relatives of sea stars and sea urchins. As such, they have Polynesia, Indo-West Pacific radial symmetry and tube feet used for feeding and Size: up to 12 inches movement. -
Glorina N. Pocsidio Institute of Biology, College of Science University of the Philippines Diliman, Quezon City
Trans. Nat. Acad. Science & Te ch. (P hils.) 1988: 10:261-266 RELATNE HEMOLYTIC POTENCIES OF HOLOTHURINS OF THIRTY PHILIPPINE HOLOTHURIANS Glorina N. Pocsidio Institute of Biology, College of Science University of the Philippines Diliman, Quezon City ABSTRACT Thirty Philippine holothurians of Families Holothriidas, Stichopodidae, Synaptidae, and Chiridotidae, mostly collected from San Fernando, La Union and Calatagan, Batangas, were investigated for their crude holothurin yield and hemolytic potency. Crude holothurin yield of different parts of the sea cucumbers in ethanolic extracts ranged from 0. 17% to 22.6% of dried samples. Hemolytic potency tested in 2% human RBC suspensions ranged from 1,564 HI/g to 666,667 HI/g dry crude holothurin. Statistical tests on the data showed significant varia tion in content and activity. In crude holothurin content, gut > Cuvierian tubules > body wall. In hemolytic potency, Cuvierian tubules > gut or body wall or gonad. Among members of the genera Actinopyga, Holothuria, Bohadschia, and Stichopus, body wall crude holothurin content was highest in Stichopus. Hemo lytic activity, however, was highest in Actinopya. Crude holothurin content yield of the gut and corresponding hemolytic activity did not differ markedly among the different samples. Between Bohadschia and Holothuria, Holothuria was super ior in both crude holothurin yield and hemolytic potency of the Cuvierian organs. The implications of the results such as the possible relation between chemical nature of the holothurins and activity are discussed. Introduction The holothurian or sea cucumber is food to the Chinese as an ingredient of soups, noodles and other dishes. Some Filipinos relish it either raw or slightly boiled or broiled and pickled salad style. -
Predator Defense Mechanisms in Shallow Water Sea Cucumbers (Holothuroidea)
UC Berkeley Student Research Papers, Fall 2006 Title Predator Defense Mechanisms in Shallow Water Sea Cucumbers (Holothuroidea) Permalink https://escholarship.org/uc/item/355702bs Author Castillo, Jessica A. Publication Date 2006-12-01 eScholarship.org Powered by the California Digital Library University of California PREDATOR DEFENSE MECHANISMS IN SHALLOW WATER SEA CUCUMBERS (HOLOTHUROIDEA) JESSICA A. CASTILLO Environmental Science Policy and Management, University of California, Berkeley, California 94720 USA Abstract. The various predator defense mechanisms possessed by shallow water sea cucumbers were surveyed in twelve different species and morphs. While many defense mechanisms such as the presence of Cuverian tubules, toxic secretions, and unpalatability have been identified in holothurians, I hypothesized that the possession of these traits as well as the degree to which they are utilized varies from species to species. The observed defense mechanisms were compared against a previously-derived phylogeny of the sea cucumbers of Moorea. Furthermore, I hypothesized that while the presence of such structures is most likely a result of the species’ placement on a phylogenetic tree, the degree to which they utilize such structures and their physical behavior are influenced by their individual ecologies. The presence of a red liquid secretion was restricted to individuals of the genus Holothuria (Linnaeus 1767) however not all members of the genus exhibited this trait. With the exception of H. leucospilota, which possessed both Cuverian tubules and a red secretion, Cuverian tubules were observed in members of the genus Bohadschia (Ostergren 1896). In accordance with the hypothesis, both the phylogenetics and individual ecology appear to influence predator defense mechanisms. -
Ostrovsky Et 2016-Biological R
Matrotrophy and placentation in invertebrates: a new paradigm Andrew Ostrovsky, Scott Lidgard, Dennis Gordon, Thomas Schwaha, Grigory Genikhovich, Alexander Ereskovsky To cite this version: Andrew Ostrovsky, Scott Lidgard, Dennis Gordon, Thomas Schwaha, Grigory Genikhovich, et al.. Matrotrophy and placentation in invertebrates: a new paradigm. Biological Reviews, Wiley, 2016, 91 (3), pp.673-711. 10.1111/brv.12189. hal-01456323 HAL Id: hal-01456323 https://hal.archives-ouvertes.fr/hal-01456323 Submitted on 4 Feb 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Biol. Rev. (2016), 91, pp. 673–711. 673 doi: 10.1111/brv.12189 Matrotrophy and placentation in invertebrates: a new paradigm Andrew N. Ostrovsky1,2,∗, Scott Lidgard3, Dennis P. Gordon4, Thomas Schwaha5, Grigory Genikhovich6 and Alexander V. Ereskovsky7,8 1Department of Invertebrate Zoology, Faculty of Biology, Saint Petersburg State University, Universitetskaja nab. 7/9, 199034, Saint Petersburg, Russia 2Department of Palaeontology, Faculty of Earth Sciences, Geography and Astronomy, Geozentrum, -
Holothurian (Echinodermata) Diversity of the Glorieuses
Western Indian Ocean J. Mar. Sci. Vol. 12, No. 1, pp. 71-78, 2013 © 2014 WIOMSA Short Communication Holothurian (Echinodermata) Diversity in the Glorieuses Archipelago (Eparses Islands, France, Mozambique Channel) Conand Chantal1,2, Thierry Mulochau3 and Chabanet Pascale4 1Laboratoire Ecologie Marine, Université de La Réunion, 97715 Saint Denis, La Réunion, France; 2Muséum Histoire Naturelle, 43 rue Cuvier, 75005 Paris, France; 3Aquarium de La Réunion, Port de plaisance, 97434 Saint-Gilles les Bains, France;4IRD, BP 50172, 97492 Ste Clotilde, La Réunion, France. Keywords: Holothuria, Glorieuses Islands, Western Indian Ocean, occurrence, diversity, coral reefs Abstract—Due to their isolation, Eparses Islands provide a valuable opportunity to investigate biodiversity in the absence of anthropogenic infuence. The Glorieuses Archipelago forms part of the Eparses Islands, or the French scattered islands in the Mozambique Channel (Western Indian Ocean). Inventories of several taxa, including the holothurians (Echinodermata), were carried out in December 2012 as part of the BIORECIE (Biodiversity, Resources and Conservation of Eparses Islands) programme. Specimens were collected and photographed on the reef slopes of the island at ten sites down to 20 m and the reef fats at twelve sites. Given the worldwide overexploitation of holothurians, it is important to know their present diversity and distribution in such remote areas. The Holothuria comprised 20 species: 10 species were collected on the slopes and 15 on the reef fats. Despite the limited number of sites surveyed, the occurrence of the different species allowed their categorisation as common, uncommon or rare. The commercial species, Holothuria nobilis, Bohadschia atra and B. subrubra, were common. Comparisons at local and regional scales using the same methodology showed that holothurian diversity in Glorieuses is high, but already occurring illegal fsheries are a serious concern.