Silence : Lectures and Writings
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Phylogeny of the Pluteaceae (Agaricales, Basidiomycota): Taxonomy and Character Evolution
AperTO - Archivio Istituzionale Open Access dell'Università di Torino Phylogeny of the Pluteaceae (Agaricales, Basidiomycota): taxonomy and character evolution This is the author's manuscript Original Citation: Availability: This version is available http://hdl.handle.net/2318/74776 since 2016-10-06T16:59:44Z Published version: DOI:10.1016/j.funbio.2010.09.012 Terms of use: Open Access Anyone can freely access the full text of works made available as "Open Access". Works made available under a Creative Commons license can be used according to the terms and conditions of said license. Use of all other works requires consent of the right holder (author or publisher) if not exempted from copyright protection by the applicable law. (Article begins on next page) 23 September 2021 This Accepted Author Manuscript (AAM) is copyrighted and published by Elsevier. It is posted here by agreement between Elsevier and the University of Turin. Changes resulting from the publishing process - such as editing, corrections, structural formatting, and other quality control mechanisms - may not be reflected in this version of the text. The definitive version of the text was subsequently published in FUNGAL BIOLOGY, 115(1), 2011, 10.1016/j.funbio.2010.09.012. You may download, copy and otherwise use the AAM for non-commercial purposes provided that your license is limited by the following restrictions: (1) You may use this AAM for non-commercial purposes only under the terms of the CC-BY-NC-ND license. (2) The integrity of the work and identification of the author, copyright owner, and publisher must be preserved in any copy. -
The Genus Pluteus (Basidiomycota, Agaricales, Pluteaceae) from Republic of São Tomé and Príncipe, West Africa
Mycosphere 9(3): 598–617 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/3/10 Copyright © Guizhou Academy of Agricultural Sciences The genus Pluteus (Basidiomycota, Agaricales, Pluteaceae) from Republic of São Tomé and Príncipe, West Africa Desjardin DE1 and Perry BA2 1Department of Biology, San Francisco State University, 1600 Holloway Ave., San Francisco, California 94132, USA 2Department of Biological Sciences, California State University East Bay, 25800 Carlos Bee Blvd., Hayward, California 94542, USA Desjardin DE, Perry BA 2018 – The genus Pluteus (Basidiomycota, Agaricales, Pluteaceae) from Republic of São Tomé and Príncipe, West Africa. Mycosphere 9(3), 598–617, Doi 10.5943/mycosphere/9/3/10 Abstract Six species of Pluteus are reported from the African island nation, Republic of São Tomé and Príncipe. Two represent new species (P. hirtellus, P. thomensis) and the other four represent new distribution records. Comprehensive descriptions, line drawings, colour photographs, comparisons with allied taxa, a dichotomous key to aid identification, and a phylogenetic analysis of pertinent Pluteus species based on ITS rDNA sequence data are provided. Key words – 2 new species – fungal diversity – Gulf of Guinea – mushrooms – pluteoid fungi – taxonomy Introduction In April 2006 (2 weeks) and April 2008 (3 weeks), expeditions led by scientists from the California Academy of Sciences and joined by mycologists from San Francisco State University visited the West African islands of São Tomé and Príncipe to document the diversity of plants, amphibians, marine invertebrates and macrofungi. This is the sixth in a series of papers focused on documenting the basidiomycetous macrofungi from the Republic (Desjardin & Perry 2009, 2015a, b, 2016, 2017). -
Species Recognition in Pluteus and Volvopluteus (Pluteaceae, Agaricales): Morphology, Geography and Phylogeny
Mycol Progress (2011) 10:453–479 DOI 10.1007/s11557-010-0716-z ORIGINAL ARTICLE Species recognition in Pluteus and Volvopluteus (Pluteaceae, Agaricales): morphology, geography and phylogeny Alfredo Justo & Andrew M. Minnis & Stefano Ghignone & Nelson Menolli Jr. & Marina Capelari & Olivia Rodríguez & Ekaterina Malysheva & Marco Contu & Alfredo Vizzini Received: 17 September 2010 /Revised: 22 September 2010 /Accepted: 29 September 2010 /Published online: 20 October 2010 # German Mycological Society and Springer 2010 Abstract The phylogeny of several species-complexes of the P. fenzlii, P. phlebophorus)orwithout(P. ro me lli i) molecular genera Pluteus and Volvopluteus (Agaricales, Basidiomycota) differentiation in collections from different continents. A was investigated using molecular data (ITS) and the lectotype and a supporting epitype are designated for Pluteus consequences for taxonomy, nomenclature and morpho- cervinus, the type species of the genus. The name Pluteus logical species recognition in these groups were evaluated. chrysophlebius is accepted as the correct name for the Conflicts between morphological and molecular delimitation species in sect. Celluloderma, also known under the names were detected in sect. Pluteus, especially for taxa in the P.admirabilis and P. chrysophaeus. A lectotype is designated cervinus-petasatus clade with clamp-connections or white for the latter. Pluteus saupei and Pluteus heteromarginatus, basidiocarps. Some species of sect. Celluloderma are from the USA, P. castri, from Russia and Japan, and apparently widely distributed in Europe, North America Volvopluteus asiaticus, from Japan, are described as new. A and Asia, either with (P. aurantiorugosus, P. chrysophlebius, complete description and a new name, Pluteus losulus,are A. Justo (*) N. Menolli Jr. Biology Department, Clark University, Instituto Federal de Educação, Ciência e Tecnologia de São Paulo, 950 Main St., Rua Pedro Vicente 625, Worcester, MA 01610, USA São Paulo, SP 01109-010, Brazil e-mail: [email protected] O. -
Justo Et Al 2010 Pluteaceae.Pdf
ARTICLE IN PRESS fungal biology xxx (2010) 1e20 journal homepage: www.elsevier.com/locate/funbio Phylogeny of the Pluteaceae (Agaricales, Basidiomycota): taxonomy and character evolution Alfredo JUSTOa,*,1, Alfredo VIZZINIb,1, Andrew M. MINNISc, Nelson MENOLLI Jr.d,e, Marina CAPELARId, Olivia RODRıGUEZf, Ekaterina MALYSHEVAg, Marco CONTUh, Stefano GHIGNONEi, David S. HIBBETTa aBiology Department, Clark University, 950 Main St., Worcester, MA 01610, USA bDipartimento di Biologia Vegetale, Universita di Torino, Viale Mattioli 25, I-10125 Torino, Italy cSystematic Mycology & Microbiology Laboratory, USDA-ARS, B011A, 10300 Baltimore Ave., Beltsville, MD 20705, USA dNucleo de Pesquisa em Micologia, Instituto de Botanica,^ Caixa Postal 3005, Sao~ Paulo, SP 010631 970, Brazil eInstituto Federal de Educac¸ao,~ Ciencia^ e Tecnologia de Sao~ Paulo, Rua Pedro Vicente 625, Sao~ Paulo, SP 01109 010, Brazil fDepartamento de Botanica y Zoologıa, Universidad de Guadalajara, Apartado Postal 1-139, Zapopan, Jal. 45101, Mexico gKomarov Botanical Institute, 2 Popov St., St. Petersburg RUS-197376, Russia hVia Marmilla 12, I-07026 Olbia (OT), Italy iInstituto per la Protezione delle Piante, CNR Sezione di Torino, Viale Mattioli 25, I-10125 Torino, Italy article info abstract Article history: The phylogeny of the genera traditionally classified in the family Pluteaceae (Agaricales, Received 17 June 2010 Basidiomycota) was investigated using molecular data from nuclear ribosomal genes Received in revised form (nSSU, ITS, nLSU) and consequences for taxonomy and character evolution were evaluated. 16 September 2010 The genus Volvariella is polyphyletic, as most of its representatives fall outside the Pluteoid Accepted 26 September 2010 clade and shows affinities to some hygrophoroid genera (Camarophyllus, Cantharocybe). Corresponding Editor: Volvariella gloiocephala and allies are placed in a different clade, which represents the sister Joseph W. -
MUSHROOMS of the OTTAWA NATIONAL FOREST Compiled By
MUSHROOMS OF THE OTTAWA NATIONAL FOREST Compiled by Dana L. Richter, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI for Ottawa National Forest, Ironwood, MI March, 2011 Introduction There are many thousands of fungi in the Ottawa National Forest filling every possible niche imaginable. A remarkable feature of the fungi is that they are ubiquitous! The mushroom is the large spore-producing structure made by certain fungi. Only a relatively small number of all the fungi in the Ottawa forest ecosystem make mushrooms. Some are distinctive and easily identifiable, while others are cryptic and require microscopic and chemical analyses to accurately name. This is a list of some of the most common and obvious mushrooms that can be found in the Ottawa National Forest, including a few that are uncommon or relatively rare. The mushrooms considered here are within the phyla Ascomycetes – the morel and cup fungi, and Basidiomycetes – the toadstool and shelf-like fungi. There are perhaps 2000 to 3000 mushrooms in the Ottawa, and this is simply a guess, since many species have yet to be discovered or named. This number is based on lists of fungi compiled in areas such as the Huron Mountains of northern Michigan (Richter 2008) and in the state of Wisconsin (Parker 2006). The list contains 227 species from several authoritative sources and from the author’s experience teaching, studying and collecting mushrooms in the northern Great Lakes States for the past thirty years. Although comments on edibility of certain species are given, the author neither endorses nor encourages the eating of wild mushrooms except with extreme caution and with the awareness that some mushrooms may cause life-threatening illness or even death. -
Pluteus Ludwigii Fungal Planet Description Sheets 455
454 Persoonia – Volume 42, 2019 Pluteus ludwigii Fungal Planet description sheets 455 Fungal Planet 943 – 19 July 2019 Pluteus ludwigii Ferisin, Justo & Dovana, sp. nov. Etymology. Named in honour of the famous German mycologist Erhard Vellinga (1990)). Pluteus eludens recently reported from Por- Ludwig. tugal, Russia and USA, is distinguished by a pileus margin Classification — Pluteaceae, Agaricales, Agaricomycetes. rugose-venose or translucently striate, longer spores (6–8.2 × 5.2–7.3 µm), different pileipellis with variable terminal elements Basidiomata medium-sized, agaricoid. Pileus 20–30 mm, hemi- in shape, darkly pigmented cheilocystidia and cylindrical or la- spherical at first, then plano-concave to concave, with straight geniform caulocystidia (Justo et al. 2011). Pluteus phlebophorus margin sometimes reflexed, not hygrophanous, dark brown at differs in larger spore size ((5.5–)7–8(–9.5) × (4.5–)5–7 µm) centre, pallescent towards margin to light brown, surface gla- and larger terminal elements of the pileipellis (Vellinga 1990). brous, weakly to strongly venous at centre, surface occasionally Pluteus nanus differs mainly in a non-venous pileus centre and cracked demonstrating whitish context underneath. Lamellae larger spores (6.5–)7–9.5(–10) × 5.5–7 µm (Vellinga 1990). moderately crowded, free, slightly ventricose, up to 4 mm The two collections of P. ludwigii clustered in a strongly sup- broad, first whitish later pink with flocculose edge. Stipe 30–45 ported clade (maximum likelihood bootstrap support value × 2–4 mm, cylindrical, bulbous, pubescent, white all over, (MLB) = 98 %) which is sister (with no support) to a collection sometimes grey at the base. -
Field Mycology Index 2000 –2016 SPECIES INDEX 1
Field Mycology Index 2000 –2016 SPECIES INDEX 1 KEYS TO GENERA etc 12 AUTHOR INDEX 13 BOOK REVIEWS & CDs 15 GENERAL SUBJECT INDEX 17 Illustrations are all listed, but only a minority of Amanita pantherina 8(2):70 text references. Keys to genera are listed again, Amanita phalloides 1(2):B, 13(2):56 page 12. Amanita pini 11(1):33 Amanita rubescens (poroid) 6(4):138 Name, volume (part): page (F = Front cover, B = Amanita rubescens forma alba 12(1):11–12 Back cover) Amanita separata 4(4):134 Amanita simulans 10(1):19 SPECIES INDEX Amanita sp. 8(4):B A Amanita spadicea 4(4):135 Aegerita spp. 5(1):29 Amanita stenospora 4(4):131 Abortiporus biennis 16(4):138 Amanita strobiliformis 7(1):10 Agaricus arvensis 3(2):46 Amanita submembranacea 4(4):135 Agaricus bisporus 5(4):140 Amanita subnudipes 15(1):22 Agaricus bohusii 8(1):3, 12(1):29 Amanita virosa 14(4):135, 15(3):100, 17(4):F Agaricus bresadolanus 15(4):113 Annulohypoxylon cohaerens 9(3):101 Agaricus depauperatus 5(4):115 Annulohypoxylon minutellum 9(3):101 Agaricus endoxanthus 13(2):38 Annulohypoxylon multiforme 9(1):5, 9(3):102 Agaricus langei 5(4):115 Anthracoidea scirpi 11(3):105–107 Agaricus moelleri 4(3):102, 103, 9(1):27 Anthurus – see Clathrus Agaricus phaeolepidotus 5(4):114, 9(1):26 Antrodia carbonica 14(3):77–79 Agaricus pseudovillaticus 8(1):4 Antrodia pseudosinuosa 1(2):55 Agaricus rufotegulis 4(4):111. Antrodia ramentacea 2(2):46, 47, 7(3):88 Agaricus subrufescens 7(2):67 Antrodiella serpula 11(1):11 Agaricus xanthodermus 1(3):82, 14(3):75–76 Arcyria denudata 10(3):82 Agaricus xanthodermus var. -
Pacific Northwest Fungi Project
North American Fungi Volume 5, Number 5, Pages 85-96 Published December 22, 2010 Larger fungi of the Canadian Arctic Esteri Ohenoja and Martti Ohenoja Department of Biology /Botanical Museum, P.O.B. 3000, FI-90014 University of Oulu, Finland Ohenoja, E., and M. Ohenoja. 2010. Larger fungi of the Canadian Arctic. North American Fungi 5(5): 85-96. doi: 10.2509/naf2010.005.0056 Corresponding author: Esteri Ohenoja [email protected] Accepted for publication July 8, 2010. http://pnwfungi.org Copyright © 2010 Pacific Northwest Fungi Project. All rights reserved. Abstract: In all 143 fungal taxa collected in the years 1971 and 1974 are presented from different habitats of the Arctic and Subarctic tundra in the Keewatin and Franklin areas of N.W.T., Canada and at Fort Churchill, Manitoba. Of the 143 species reported, 122 species are new in N.W.T. and Fort Churchill. The diversity of mycorrhizal species was highest in drier lichen-moss and moss tundra heaths, and in late snow patches, the most common genera being Cortinarius, Inocybe, Hebeloma, Lactarius, and Russula. The most frequent saprobic fungi were Hygrocybe, Arrhenia, Clitocybe, Galerina some of which are bryophilous and Helvella species. In the forest tundra, numerous species typical of conifer forests were found as mycorrhizal symbionts of Picea and Larix. These collections remain the primary source of information on macrofungi in this region. Key words: Agaricales, Russulales, Aphyllophorales, gasteromycetes, Ascomycota, ecology, Arctic tundra, Forest tundra, Canada N.W.T, Fort Churchill/Manitoba 86 Ohenoja & Ohenoja. Larger fungi of the Canadian Arctic. North American Fungi 5(5):85-96 Introduction: This is a continuation of the flora with S. -
Bibliographic Inventory of Moroccan Rif's Fungi
Journal of Animal & Plant Sciences, 2011. Vol. 12, Issue 1: 1493-1526 Publication date: 30/11/2011 , http://www.biosciences.elewa.org/JAPS ; ISSN 2071 - 7024 JAPS Bibliographic inventory of Moroccan Rif’s fungi: Catalog of rifain fungal flora Saifeddine El kholfy¹, Fatima Aït Aguil¹, Amina Ouazzani Touhami¹, Rachid Benkirane¹ & Allal Douira¹ (1) Laboratoire de Botanique et de Protection des Plantes, UFR de Mycologie, Département de Biologie, Faculté des Sciences, BP. 133, Université Ibn Tofail, Kénitra, Maroc. Corresponding author email: [email protected] Key words: Morocco, Rif, fungal Flora, Biodiversity, Inventory, Basidiomycetes. Mots clés: Maroc, Rif, Flore fongique, Biodiversité, Inventaire, Basidiomycètes. 1 SUMMARY The Moroccan Rif provides favorable conditions for development and fruiting of a rich and diverse fungal flora. This fungal flora has a richness of 752 species belonging to the class of Basidiomycetes, divided into 19 orders, 62 families and 165 genera. The present catalog of rifain fungal flora constitutes a large contribution to the knowledge of the biodiversity of fungi in the Moroccan Rif. The species are completed and updated with new science and arranged according to the main mycological classification. However, it is certain that the attentive and methodical explorations in the Rifain forests could be the origin of new discoveries for the fungal flora of Morocco. RESUME Le Rif marocain offre des conditions favorables au développement et à la fructification d’une flore fongique riche et diversifiée. Cette dernière compte une richesse spécifique de 752 espèces appartenant à la classe des Basidiomycètes, répartie en 19 ordres, 62 familles et 165 genres. Le présent catalogue de la flore fongique rifaine constitue une grande contribution à la connaissance de la biodiversité des champignons dans le Rif marocain. -
September 2017
MushRumors The Newsletter of the Northwest Mushroomers Association Volume 28, Issue 3 September 1, 2017 Whats New, a Letter from Our Treasurer Greetings fellow NMA’ers! I’m writing this article on a HOT August day, but I’m dreaming of a cool, moist autumn that will bring us a great diversity of fungi for our fall forays and for the Fall Mushroom Show. What’s New with the Board: --Welcome to our new Board! President Brennen Brown; Secretary Deborah Gilbert; Treasurer Linda Magee, and Trustees Martha Dyck, Eva-Maria Gold, Mark Johnson, Buck McAdoo, Richard Mollette, and Christa Simmons. --And a big thank you to those members who are assuming essential, non-Board duties: Membership Coordi- nator Eric Worden and Foray Coordinator Christa Simmons. --Brennen will be doubling up to handle the V-P job, which involves coordinating our speakers’ schedules and logistics, such as housing and transportation. He will need members’ assistance to make our speakers feel wel- come. Please volunteer to pick up, host, or drop of our speakers throughout the year. --If you would like to be V-P, our President can appoint you as an acting V-P, and you can begin immediately. What’s New with the Club: --Thanks, many times over to Jack Waytz! After more than 14 years of selfess service contributing content and formatting the NMA newsletter, Jack passed the newsletter formatting reigns to Amelia Thompson. Please look for more of Jack’s excellent articles in the upcoming newsletters. --The fall mushrooming season is here. Get ready to make the October 22, 2017 NMA Fall Mushroom Show a success. -
Discrimination Between Edible and Poisonous Mushrooms Among
Genes Genet. Syst. (2020) 95, p. Edible1–7 and poisonous Entoloma discrimination by CO1 1 Discrimination between edible and poisonous mushrooms among Japanese Entoloma sarcopum and related species based on phylogenetic analysis and insertion/deletion patterns of nucleotide sequences of the cytochrome oxidase 1 gene Wataru Aoki1†, Maiko Watanabe2*, Masaki Watanabe1, Naoki Kobayashi1, Jun Terajima2‡, Yoshiko Sugita-Konishi1, Kazunari Kondo2 and Yukiko Hara-Kudo2 1Department of Life and Environmental Sciences, Azabu University, Sagamihara, Kanagawa 252-5201, Japan 2National Institute of Health Sciences, Kawasaki, Kanagawa 210-9501, Japan (Received 19 July 2019, accepted 28 February 2020; J-STAGE Advance published date: 30 July 2020) Entoloma sarcopum is widely known as an edible mushroom but appears mor- phologically similar to the poisonous mushrooms E. rhodopolium sensu lato (s. l.) and E. sinuatum s. l. Many cases of food poisoning caused by eating these poison- ous mushrooms occur each year in Japan. Therefore, they were recently reclas- sified based on both morphological and molecular characteristics as sensu stricto species. In this study, we analyzed the nucleotide sequences of the rRNA gene (rDNA) cluster region, mainly including the internal transcribed spacer regions and mitochondrial cytochrome oxidase 1 (CO1) gene, in E. sarcopum and its related species, to evaluate performances of these genes as genetic markers for identifica- tion and molecular phylogenetic analysis. We found that the CO1 gene contained lineage-specific insertion/deletion sequences, and our CO1 tree yielded phyloge- netic information that was not supported by analysis of the rDNA cluster region sequence. Our results suggested that the CO1 gene is a better genetic marker than the rDNA cluster region, which is the most widely used marker for fungal identification and classification, for discrimination between edible and poisonous mushrooms among Japanese E. -
Persons' Index
Persons’ Index Persons’ Index Page numbers in italics refer to images. A Cramer, Karl Eduard ............................106 Culberson, Chicita F. ..............................74 Abbe, Ernst .......................................... 111 Culberson, William L. ........................1, 74 Acharius, Erik .......................... 4, 104, 661 Albertini, Johann Baptista von .............105 Almborn, Ove ........................................ 17 D Amici, Giovanni Battista ..................... 661 Dahl, Eilif ............................................... 17 Ardenne, Manfred von .........................127 De Notaris, Giuseppe ...........................662 Arnold, Ferdinand ..............17, 66, 68, 109 Degelius, Gunnar ....................... 17, 42, 73 Awasthi, Dharani Dhar ...........................61 Delavay, Pierre Jean Marie .................. 621 Della Porta, Gianbattista ......................102 B Des Abbayes, Henry ............................... 17 Dickoré, W. Bernhard ............ 74, 619, 646 Bary, Anton de .......................4, 107ff, 130 Dillen, Johann Jacob ............................103 Bauhin, Caspar .....................................103 Döbbeler, Peter .................36, 51, 72ff, 109 Bauhin, Johann .....................................103 Doppelbaur, Hans .................... 21, 22, 518f Baumgärtner, Hilde .......................... 29, 30 Bébert, Antoine .................................... 131 Beschel, Roland ..................................... 71 E Braun, Wolfgang ...................................