Polykrikos Tanit Sp. Nov., a New Mixotrophic Unarmoured
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A Parasite of Marine Rotifers: a New Lineage of Dinokaryotic Dinoflagellates (Dinophyceae)
Hindawi Publishing Corporation Journal of Marine Biology Volume 2015, Article ID 614609, 5 pages http://dx.doi.org/10.1155/2015/614609 Research Article A Parasite of Marine Rotifers: A New Lineage of Dinokaryotic Dinoflagellates (Dinophyceae) Fernando Gómez1 and Alf Skovgaard2 1 Laboratory of Plankton Systems, Oceanographic Institute, University of Sao˜ Paulo, Prac¸a do Oceanografico´ 191, Cidade Universitaria,´ 05508-900 Butanta,˜ SP, Brazil 2Department of Veterinary Disease Biology, University of Copenhagen, Stigbøjlen 7, 1870 Frederiksberg C, Denmark Correspondence should be addressed to Fernando Gomez;´ [email protected] Received 11 July 2015; Accepted 27 August 2015 Academic Editor: Gerardo R. Vasta Copyright © 2015 F. Gomez´ and A. Skovgaard. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Dinoflagellate infections have been reported for different protistan and animal hosts. We report, for the first time, the association between a dinoflagellate parasite and a rotifer host, tentatively Synchaeta sp. (Rotifera), collected from the port of Valencia, NW Mediterranean Sea. The rotifer contained a sporangium with 100–200 thecate dinospores that develop synchronically through palintomic sporogenesis. This undescribed dinoflagellate forms a new and divergent fast-evolved lineage that branches amongthe dinokaryotic dinoflagellates. 1. Introduction form independent lineages with no evident relation to other dinoflagellates [12]. In this study, we describe a new lineage of The alveolates (or Alveolata) are a major lineage of protists an undescribed parasitic dinoflagellate that largely diverged divided into three main phyla: ciliates, apicomplexans, and from other known dinoflagellates. -
Cell Lysis of a Phagotrophic Dinoflagellate, Polykrikos Kofoidii Feeding on Alexandrium Tamarense
Plankton Biol. Ecol. 47 (2): 134-136,2000 plankton biology & ecology f The Plankton Society of Japan 2(100 Note Cell lysis of a phagotrophic dinoflagellate, Polykrikos kofoidii feeding on Alexandrium tamarense Hyun-Jin Cho1 & Kazumi Matsuoka2 'Graduate School of Marine Science and Engineering, Nagasaki University, 1-14 Bunkyo-inachi, Nagasaki 852-8521. Japan 2Laboratory of Coastal Environmental Sciences, Faculty of Fisheries. Nagasaki University. 1-14 Bunkyo-machi, Nagasaki 852-8521. Japan Received 9 December 1999; accepted 10 April 2000 In many cases, phytoplankton blooms terminate suddenly dinoflagellate, Alexandrium tamarense (Lebour) Balech. within a few days. For bloom-forming phytoplankton, grazing P. kofoidii was collected from Isahaya Bay in western is one of the major factors in the decline of blooms as is sexual Kyushu, Japan, on 3 November, 1998. We isolated actively reproduction to produce non-dividing gametes and planozy- swimming P. kofoidii using a capillary pipette and individually gotes (Anderson et al. 1983; Frost 1991). Matsuoka et al. transferred them into multi-well tissue culture plates contain (2000) reported growth rates of a phagotrophic dinoflagellate, ing a dense suspension of the autotrophic dinoflagellate, Polykrikos kofoidii Chatton, using several dinoflagellate Gymnodinium catenatum Graham (approximately 700 cells species as food organisms. They noted that P. kofoidii showed ml"1) isolated from a bloom near Amakusa Island, western various feeding and growth responses to strains of Alexan Japan, 1997. The P. kofoidii were cultured at 20°C with con drium and Prorocentrum. This fact suggests that for ecological stant lighting to a density of 60 indiv. ml"1, and then starved control of phytoplankton blooms, we should collect infor until no G. -
Ichthyotoxic Cochlodinium Polykrikoides Red Tides Offshore in the South Sea, Korea in 2014: II
Research Article Algae 2017, 32(3): 199-222 https://doi.org/10.4490/algae.2017.32.8.25 Open Access Ichthyotoxic Cochlodinium polykrikoides red tides offshore in the South Sea, Korea in 2014: II. Heterotrophic protists and their grazing impacts on red-tide organisms An Suk Lim1,2, Hae Jin Jeong1,3,*, Kyeong Ah Seong4, Moo Joon Lee1, Nam Seon Kang5, Se Hyeon Jang1, Kyung Ha Lee1, Jae Yeon Park3, Tae Young Jang1 and Yeong Du Yoo4 1School of Earth and Environmental Sciences, College of Natural Sciences, Seoul National University, Seoul 08826, Korea 2Brain Korea 21 Plus, School of Earth and Environmental Sciences, College of Natural Sciences, Seoul National University, Seoul 08826, Korea 3Advanced Institutes of Convergence Technology, Suwon 16229, Korea 4Department of Marine Biotechnology, Kunsan National University, Kunsan 54150, Korea 5Marine Biodiversity Institute of Korea, Seochun 33662, Korea Occurrence of Cochlodinium polykrikoides red tides have resulted in considerable economic losses in the aquaculture industry in many countries, and thus predicting the process of C. polykrikoides red tides is a critical step toward minimiz- ing those losses. Models predicting red tide dynamics define mortality due to predation as one of the most important parameters. To investigate the roles of heterotrophic protists in red tide dynamics in the South Sea of Korea, the abun- dances of heterotrophic dinoflagellates (HTDs), tintinnid ciliates (TCs), and naked ciliates (NCs) were measured over one- or two-week intervals from May to Nov 2014. In addition, the grazing impacts of dominant heterotrophic protists on each red tide species were estimated by combining field data on red tide species abundances and dominant heterotro- phic protist grazers with data obtained from the literature concerning ingestion rates of the grazers on red tide species. -
Université Du Québec À Rimouski
UNIVERSITÉ DU QUÉBEC À RIMOUSKI INTRODUCTION DE DINOFLAGELLÉS NON INDIGÈNES DANS LES ÉCOSYSTÈMES AQUATIQUES CANADIENS VIA LES RÉSERVOIRS DE BALLAST DES NA VIRES Thèse présentée dans le cadre du programme de doctorat en Océanographie en vue de l'obtention du grade de philosophiœ doctor, océanographie PAR © OSCAR GABRIEL CASAS MONROY AVRIL 2012 UNIVERSITÉ DU QUÉBEC À RIMOUSKI Service de la bibliothèque Avertissement La diffusion de ce mémoire ou de cette thèse se fait dans le respect des droits de son auteur, qui a signé le formulaire « Autorisation de reproduire et de diffuser un rapport, un mémoire ou une thèse ». En signant ce formulaire, l’auteur concède à l’Université du Québec à Rimouski une licence non exclusive d’utilisation et de publication de la totalité ou d’une partie importante de son travail de recherche pour des fins pédagogiques et non commerciales. Plus précisément, l’auteur autorise l’Université du Québec à Rimouski à reproduire, diffuser, prêter, distribuer ou vendre des copies de son travail de recherche à des fins non commerciales sur quelque support que ce soit, y compris l’Internet. Cette licence et cette autorisation n’entraînent pas une renonciation de la part de l’auteur à ses droits moraux ni à ses droits de propriété intellectuelle. Sauf entente contraire, l’auteur conserve la liberté de diffuser et de commercialiser ou non ce travail dont il possède un exemplaire. 11 III Composition du jury: Philippe Archambault, président du jury, Université du Québec à Rimouski Suzanne Roy, directeur de recherche, Université du Québec à Rimouski André Rochon, codirecteur de recherche, Université du Québec à Rimouski Lucie Maranda, examinateur externe, University of Rhode Island USA. -
Character Evolution in Polykrikoid Dinoflagellates1
J. Phycol. 43, 366–377 (2007) r 2007 by the Phycological Society of America DOI: 10.1111/j.1529-8817.2007.00319.x CHARACTER EVOLUTION IN POLYKRIKOID DINOFLAGELLATES1 Mona Hoppenrath2 and Brian S. Leander Departments of Botany and Zoology, University of British Columbia, 6270 University Boulevard, Vancouver, BC, Canada V6T 1Z4 A synthesis of available data on the morphological Ti:Tv, transition/transversion ratio; WNJ, weighted diversity of polykrikoid dinoflagellates allowed neighbor joining us to formulate a hypothesis of relationships that help explain character evolution within the group. Phylogenetic analyses of new SSU rDNA sequences from Pheopolykrikos beauchampii Chatton, Polykrikos kofoidii Chatton, and Polykrikos lebourae Herdman The dinoflagellate genus Polykrikos was erected by helped refine this hypothetical framework. Our re- Bu¨tschli (1873), with the type species P. schwartzii sults demonstrated that ‘‘pseudocolonies’’ in dino- Bu¨tschli. The most distinctive feature of this athecate flagellates evolved convergently at least three times genus is the formation of multinucleated pseudocolo- independently from different Gymnodinium-like nies comprised of an even number of zooids that are ancestors: once in haplozoans; once in Ph. beau- otherwise similar in morphology to individual dino- champii; and at least once within a lineage contain- flagellates in external view. However, despite every ing Ph. hartmannii, P.kofoidii,andP. lebourae.The zooid having its own cingulum and pair of flagella, the Gymnodiniales sensu stricto was strongly supported zooid sulci are fused together. A pseudocolony often by the data, and the type species for the genus, name- has half the number of nuclei because it has zooids. ly Gymnodinium fuscum (Ehrenb.)F.Stein,formedthe Trichocysts, nematocysts, taeniocysts, mucocysts, and nearest sister lineage to a well-supported Polykrikos plastids have all been reported from different mem- clade. -
Science Journals
SCIENCE ADVANCES | RESEARCH ARTICLE CELL BIOLOGY 2017 © The Authors, some rights reserved; Microbial arms race: Ballistic “nematocysts” exclusive licensee American Association in dinoflagellates represent a new extreme in for the Advancement of Science. Distributed organelle complexity under a Creative Commons Attribution 1,2 † 3,4 5 6 NonCommercial Gregory S. Gavelis, * Kevin C. Wakeman, Urban Tillmann, Christina Ripken, License 4.0 (CC BY-NC). Satoshi Mitarai,6 Maria Herranz,1 Suat Özbek,7 Thomas Holstein,7 Patrick J. Keeling,1 Brian S. Leander1,2 We examine the origin of harpoon-like secretory organelles (nematocysts) in dinoflagellate protists. These ballistic organelles have been hypothesized to be homologous to similarly complex structures in animals (cnidarians); but we show, using structural, functional, and phylogenomic data, that nematocysts evolved independently in both lineages. We also recorded the first high-resolution videos of nematocyst discharge in dinoflagellates. Unexpectedly, our data suggest that different types of dinoflagellate nematocysts use two fundamentally different types of ballistic mechanisms: one type relies on a single pressurized capsule for propulsion, whereas the other type launches 11 to 15 projectiles from an arrangement similar to a Gatling gun. Despite their radical structural differences, these nematocysts share a single origin within dinoflagellates and both potentially use a contraction-based mechanism to generate ballistic force. The diversity of traits in dinoflagellate nematocysts demonstrates a stepwise route by which simple secretory structures diversified to yield elaborate subcellular weaponry. INTRODUCTION in the phylum Cnidaria (7, 8), which is among the earliest diverging Planktonic microbes are often viewed as passive food items for larger life- predatory animal phyla. -
Polykrikos Tanit Sp. Nov., a New Mixotrophic Unarmoured Pseudocolonial Dinoflagellate from the NW Mediterranean Sea
Polykrikos tanit sp. nov., a New Mixotrophic Unarmoured Pseudocolonial Dinoflagellate from the NW Mediterranean Sea Running title: Polykrikos tanit sp. nov. Albert Reñé *, Jordi Camp, Esther Garcés Institut de Ciències del Mar (CSIC) Pg. Marítim de la Barceloneta, 37-49 08003 Barcelona (Spain) * Corresponding author: Tel.: +34 93 230 9500; fax: +34 93 230 9555; E-mail address: [email protected] 1 ABSTRACT Pigmented pseudocolonies initially identified as Polykrikos hartmannii Zimmermann were detected at several locations of the Catalan coast (NW Mediterranean Sea) in April–June of 2012 and April–May of 2013. To further explore the several remarkable morphological discrepancies between these organisms and P. hartmannii, we carried out a detailed morphological study and used single-cell PCR to obtain partial LSU and SSU rDNA sequences. The resulting phylogenies showed that our isolates occupy a basal position within the Polykrikos clade, close to P. hartmannii, but do not correspond to any described polykrikoid species. P. barnegatensis Martin is controversially considered to be synonymous with P. hartmannii. The organisms studied in this work were similar to P. barnegatensis but showed significant morphological differences with its original description such as the torsion of the pseudocolony, more pronounced overhanging of the cingula, stepped fusion border of the zooids, and number and shape of nuclei. Consequently, we propose that the isolates constitute a new species, which we named Polykrikos tanit sp. nov. The observed characters, pigmented, same number of zooids and nuclei, sulci not fused, and its phylogeny suggest that the species is an early evolutionary Polykrikos species. Keywords: acrobase; Pheopolykrikos; peduncle; phylogeny; SEM; single-cell PCR 2 INTRODUCTION The polykrikoid organisms are included within the Gymnodiniales sensu stricto clade (Hoppenrath and Leander 2007a, b; Kim et al. -
Dinoflagellate Cyst Production Over an Annual Cycle in Seasonally Ice
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/296682906 Dinoflagellate cyst production over an annual cycle in seasonally ice-covered Hudson Bay Article in Marine Micropaleontology · March 2016 DOI: 10.1016/j.marmicro.2016.02.005 CITATIONS READS 28 570 6 authors, including: Maija Heikkilä Vera Pospelova University of Helsinki University of Minnesota Twin Cities 33 PUBLICATIONS 961 CITATIONS 116 PUBLICATIONS 2,808 CITATIONS SEE PROFILE SEE PROFILE Alexandre Forest Gary Stern Laval University University of Manitoba 58 PUBLICATIONS 1,140 CITATIONS 245 PUBLICATIONS 10,797 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: MALINA View project Neurotoxicological risk of mercury exposure for beluga whales from the Mackenzie Delta Estuary View project All content following this page was uploaded by Maija Heikkilä on 15 November 2017. The user has requested enhancement of the downloaded file. Marine Micropaleontology 125 (2016) 1–24 Contents lists available at ScienceDirect Marine Micropaleontology journal homepage: www.elsevier.com/locate/marmicro Research paper Dinoflagellate cyst production over an annual cycle in seasonally ice-covered Hudson Bay Maija Heikkilä a,b,⁎,VeraPospelovac, Alexandre Forest d, Gary A. Stern b, Louis Fortier d, Robie W. Macdonald b,e a Environmental Change Research Unit, Department of Environmental Sciences, P.O. Box 65, 00014 University of Helsinki, Finland b Centre for Earth Observation Science, University of Manitoba, 496 Wallace Building, Winnipeg MB R3T 2N2, Canada c School of Earth and Ocean Sciences, University of Victoria, OEASB A405, P.O. Box 1700 STN CSC, Victoria BC V8W 2Y2, Canada d Université Laval, Takuvik Joint Laboratory, Pavillon Alexandre-Vachon 1045, Avenue de la Médecine Local VCH-2064, Quebec City, QC G1V 0A6, Canada e Institute of Ocean Sciences, Department of Fisheries and Oceans, 9860 W. -
Diversity of Dinoflagellate Assemblages in Coastal Temperate
Manning et al. BMC Ecol Evo (2021) 21:27 BMC Ecology and Evolution https://doi.org/10.1186/s12862-021-01745-5 RESEARCH ARTICLE Open Access Diversity of dinofagellate assemblages in coastal temperate and ofshore tropical waters of Australia Tahnee Manning1* , Arjun Venkatesh Thilagaraj1, Dmitri Mouradov2 , Richard Piola3 , Clare Grandison3 , Matthew Gordon3 , Jef Shimeta1 and Aidyn Mouradov1 Abstract Background: Dinofagellates are a ubiquitous and ecologically important component of marine phytoplankton communities, with particularly notable species including those associated with harmful algal blooms (HABs) and those that bioluminesce. High-throughput sequencing ofers a novel approach compared to traditional microscopy for determining species assemblages and distributions of dinofagellates, which are poorly known especially in Aus- tralian waters. Results: We assessed the composition of dinofagellate assemblages in two Australian locations: coastal temper- ate Port Phillip Bay and ofshore tropical waters of Davies Reef (Great Barrier Reef). These locations difer in certain environmental parameters refecting latitude as well as possible anthropogenic infuences. Molecular taxonomic assessment revealed more species than traditional microscopy, and it showed statistically signifcant diferences in dinofagellate assemblages between locations. Bioluminescent species and known associates of HABs were present at both sites. Dinofagellates in both areas were mainly represented by the order Gymnodiniales (66%—82% of total sequence reads). In the warm waters of Davies Reef, Gymnodiniales were equally represented by the two superclades, Gymnodiniales sensu stricto (33%) and Gyrodinium (34%). In contrast, in cooler waters of Port Phillip Bay, Gymnod- iniales was mainly represented by Gyrodinium (82%). In both locations, bioluminescent dinofagellates represented up to 0.24% of the total sequence reads, with Protoperidinium the most abundant genus. -
Diversity and Vertical Distribution of Microbial Eukaryotes in the Snow, Sea Ice and Seawater Near the North Pole at the End of the Polar Night
ORIGINAL RESEARCH ARTICLE published: 11 May 2011 doi: 10.3389/fmicb.2011.00106 Diversity and vertical distribution of microbial eukaryotes in the snow, sea ice and seawater near the North Pole at the end of the polar night Charles Bachy1, Purificación López-García1, Alexander Vereshchaka 2 and David Moreira1* 1 Unité d’Ecologie, Systématique et Evolution, UMR CNRS 8079, Université Paris-Sud, Orsay, France 2 Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia Edited by: Our knowledge about the microorganisms living in the high Arctic Ocean is still rudimentary Jennifer F. Biddle, University of compared to other oceans mostly because of logistical challenges imposed by its inhospitable Delaware, USA climate and the presence of a multi-year ice cap. We have used 18S rRNA gene libraries to study Reviewed by: Peter D. Countway, Bigelow Laboratory the diversity of microbial eukaryotes in the upper part of the water column (0–170 m depth), the sea for Ocean Sciences, USA ice (0–1.5 m depth) and the overlying snow from samples collected in the vicinity of the North Pole Daniel Vaulot, Station Biologique de (N88°35′, E015°59) at the very end of the long polar night. We detected very diverse eukaryotes Roscoff, France belonging to Alveolata, Fungi, Amoebozoa, Viridiplantae, Metazoa, Rhizaria, Heterokonta, and *Correspondence: Telonemia. Different alveolates (dinoflagellates and Marine Alveolate Groups I and II species) David Moreira, Unité d’Ecologie, Systématique et Evolution, UMR were the most abundant and diverse in gene libraries from water and sea ice, representing 80% CNRS 8079, Université Paris-Sud, of the total number of clones and operational taxonomic units. -
Syndiniales), Parasites of Marine Dinoflagellates
Sorbonne Université École doctorale 227: Sciences de la Nature et de l’Homme: Écologie et Évolution Station Biologique de Roscoff / Adaptation et diversité en milieu marin, UMR 7144 Hidden species diversity and the potential for sexual reproduction in the species complex Amoebophrya ceratii (Syndiniales), parasites of marine dinoflagellates Exploration de la diversité et du potentiel pour la reproduction sexuée au sein du complexe d’espèces Amoebophrya ceratii (Syndiniales), parasites de dinoflagellés marins Ruibo CAI Thèse de doctorat en Evolution moléculaire et Génomique comparative Dirigée par Laure Guillou Présentée et soutenue publiquement le 5 Novembre 2019 Devant un jury composé de : Georges Barbier, Pr HDR, ESIAB Rapporteur Ramon Massana, Pr, CSIC, Barcelone, Espagne Rapporteur Aurélie Chambouvet, CR, CNRS, LEMAR UMR 6539 Examinateur Christophe Destombe, Pr, HDR, SU, UMI3614 Examinateur Christine Paillard, DR HDR, CNRS, LEMAR UMR 6539 Examinateur Eric Pelletier, CR, Genoscope, CEA Examinateur Laure Guillou, DR HDR, CNRS, UMR7144 Directeur de Thèse 2 Contents General Introduction 5 1 Diversity and Evolution in Alveolata 6 2 Dinoflagellates 9 2.1 Biology of dinoflagellates 9 2.2 Diversity of dinoflagellates 10 2.3 Taxonomy of dinoflagellates 13 2.4 Phylogeny and evolution of dinoflagellates 15 2.5 Life cycles of dinoflagellates 20 2.6 Genomics 23 3 The parasite in dinoflagellates: Syndiniales 25 3.1 Taxonomy and phylogeny of Syndiniales 25 3.2 Biology of Syndiniales 26 3.3 Ecology of Syndiniales 26 3.4 Life cycles of Syndiniales 28 3.5 Genomics 29 4 Research models in this study 31 4.1 Our targeted hosts 32 4.2 Our targeted parasites: Amoebophrya 34 Objectives of this thesis 39 Chapter 1 40 Cryptic species in the parasitic Amoebophrya species complex revealed by a polyphasic approach 40 Abstract 42 Introduction 43 Material and Methods 45 Results and discussion 50 Concluding remarks 54 Acknowledgements 56 References 56 Figure and Table legends 63 Chapter 2 86 Potential for sexual reproduction in Amoebophrya spp. -
Dinoflagellate Nucleus Contains an Extensive Endomembrane Network, the Nuclear Net
www.nature.com/scientificreports OPEN Dinofagellate nucleus contains an extensive endomembrane network, the nuclear net Received: 20 April 2018 Gregory S. Gavelis1,2,3, Maria Herranz2,3, Kevin C. Wakeman4, Christina Ripken5, Accepted: 28 November 2018 Satoshi Mitarai6, Gillian H. Gile 1, Patrick J. Keeling2 & Brian S. Leander1,2 Published: xx xx xxxx Dinofagellates are some of the most common eukaryotic cells in the ocean, but have very unusual nuclei. Many exhibit a form of closed mitosis (dinomitosis) wherein the nuclear envelope (NE) invaginates to form one or more trans-nuclear tunnels. Rather than contact spindles directly, the chromatids then bind to membrane-based kinetochores on the NE. To better understand these unique mitotic features, we reconstructed the nuclear architecture of Polykrikos kofoidii in 3D using focused ion beam scanning electron microscopy (FIB-SEM) in conjunction with high-pressure freezing, freeze- substitution, TEM, and confocal microscopy. We found that P. kofoidii possessed six nuclear tunnels, which were continuous with a reticulating network of membranes that has thus far gone unnoticed. These membranous extensions interconnect the six tunnels while ramifying throughout the nucleus to form a “nuclear net.” To our knowledge, the nuclear net is the most elaborate endomembrane structure described within a nucleus. Our fndings demonstrate the utility of tomographic approaches for detecting 3D membrane networks and show that nuclear complexity has been underestimated in Polykrikos kofoidii and, potentially, in other dinofagellates. Dinofagellate nuclei (dinokarya) have long fascinated cell biologists because of their bizarre features. Tey con- tain some of the largest eukaryotic genomes, housed in dozens to hundreds of chromosomes that remain per- manently condensed throughout the cell cycle1,2.