) Mwieucan Mzisdllm
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
§4-71-6.5 LIST of CONDITIONALLY APPROVED ANIMALS November
§4-71-6.5 LIST OF CONDITIONALLY APPROVED ANIMALS November 28, 2006 SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Oligochaeta ORDER Plesiopora FAMILY Tubificidae Tubifex (all species in genus) worm, tubifex PHYLUM Arthropoda CLASS Crustacea ORDER Anostraca FAMILY Artemiidae Artemia (all species in genus) shrimp, brine ORDER Cladocera FAMILY Daphnidae Daphnia (all species in genus) flea, water ORDER Decapoda FAMILY Atelecyclidae Erimacrus isenbeckii crab, horsehair FAMILY Cancridae Cancer antennarius crab, California rock Cancer anthonyi crab, yellowstone Cancer borealis crab, Jonah Cancer magister crab, dungeness Cancer productus crab, rock (red) FAMILY Geryonidae Geryon affinis crab, golden FAMILY Lithodidae Paralithodes camtschatica crab, Alaskan king FAMILY Majidae Chionocetes bairdi crab, snow Chionocetes opilio crab, snow 1 CONDITIONAL ANIMAL LIST §4-71-6.5 SCIENTIFIC NAME COMMON NAME Chionocetes tanneri crab, snow FAMILY Nephropidae Homarus (all species in genus) lobster, true FAMILY Palaemonidae Macrobrachium lar shrimp, freshwater Macrobrachium rosenbergi prawn, giant long-legged FAMILY Palinuridae Jasus (all species in genus) crayfish, saltwater; lobster Panulirus argus lobster, Atlantic spiny Panulirus longipes femoristriga crayfish, saltwater Panulirus pencillatus lobster, spiny FAMILY Portunidae Callinectes sapidus crab, blue Scylla serrata crab, Samoan; serrate, swimming FAMILY Raninidae Ranina ranina crab, spanner; red frog, Hawaiian CLASS Insecta ORDER Coleoptera FAMILY Tenebrionidae Tenebrio molitor mealworm, -
Transcriptome Ortholog Alignment Sequence Tools (TOAST) for Phylogenomic Dataset Assembly
Transcriptome Ortholog Alignment Sequence Tools (TOAST) for Phylogenomic Dataset Assembly Dustin J. Wcisel North Carolina State University J. Thomas Howard North Carolina State University Jeffrey A. Yoder North Carolina State University Alex Dornburg ( [email protected] ) NC Museum of Natural Sciences https://orcid.org/0000-0003-0863-2283 Software Keywords: BUSCO ortholog assembly, Cetacean and teleost sh phylogeny, Missing Data Visualization, Transcriptome, Concatenated Alignment Posted Date: March 12th, 2020 DOI: https://doi.org/10.21203/rs.2.16269/v4 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Version of Record: A version of this preprint was published at BMC Evolutionary Biology on March 30th, 2020. See the published version at https://doi.org/10.1186/s12862-020-01603-w. Page 1/18 Abstract Background Advances in next-generation sequencing technologies have reduced the cost of whole transcriptome analyses, allowing characterization of non-model species at unprecedented levels. The rapid pace of transcriptomic sequencing has driven the public accumulation of a wealth of data for phylogenomic analyses, however lack of tools aimed towards phylogeneticists to eciently identify orthologous sequences currently hinders effective harnessing of this resource. Results We introduce TOAST, an open source R software package that can utilize the ortholog searches based on the software Benchmarking Universal Single-Copy Orthologs (BUSCO) to assemble multiple sequence alignments of orthologous loci from transcriptomes for any group of organisms. By streamlining search, query, and alignment, TOAST automates the generation of locus and concatenated alignments, and also presents a series of outputs from which users can not only explore missing data patterns across their alignments, but also reassemble alignments based on user-dened acceptable missing data levels for a given research question. -
Summary Report of Freshwater Nonindigenous Aquatic Species in U.S
Summary Report of Freshwater Nonindigenous Aquatic Species in U.S. Fish and Wildlife Service Region 4—An Update April 2013 Prepared by: Pam L. Fuller, Amy J. Benson, and Matthew J. Cannister U.S. Geological Survey Southeast Ecological Science Center Gainesville, Florida Prepared for: U.S. Fish and Wildlife Service Southeast Region Atlanta, Georgia Cover Photos: Silver Carp, Hypophthalmichthys molitrix – Auburn University Giant Applesnail, Pomacea maculata – David Knott Straightedge Crayfish, Procambarus hayi – U.S. Forest Service i Table of Contents Table of Contents ...................................................................................................................................... ii List of Figures ............................................................................................................................................ v List of Tables ............................................................................................................................................ vi INTRODUCTION ............................................................................................................................................. 1 Overview of Region 4 Introductions Since 2000 ....................................................................................... 1 Format of Species Accounts ...................................................................................................................... 2 Explanation of Maps ................................................................................................................................ -
A Review of the Systematic Biology of Fossil and Living Bony-Tongue Fishes, Osteoglossomorpha (Actinopterygii: Teleostei)
Neotropical Ichthyology, 16(3): e180031, 2018 Journal homepage: www.scielo.br/ni DOI: 10.1590/1982-0224-20180031 Published online: 11 October 2018 (ISSN 1982-0224) Copyright © 2018 Sociedade Brasileira de Ictiologia Printed: 30 September 2018 (ISSN 1679-6225) Review article A review of the systematic biology of fossil and living bony-tongue fishes, Osteoglossomorpha (Actinopterygii: Teleostei) Eric J. Hilton1 and Sébastien Lavoué2,3 The bony-tongue fishes, Osteoglossomorpha, have been the focus of a great deal of morphological, systematic, and evolutio- nary study, due in part to their basal position among extant teleostean fishes. This group includes the mooneyes (Hiodontidae), knifefishes (Notopteridae), the abu (Gymnarchidae), elephantfishes (Mormyridae), arawanas and pirarucu (Osteoglossidae), and the African butterfly fish (Pantodontidae). This morphologically heterogeneous group also has a long and diverse fossil record, including taxa from all continents and both freshwater and marine deposits. The phylogenetic relationships among most extant osteoglossomorph families are widely agreed upon. However, there is still much to discover about the systematic biology of these fishes, particularly with regard to the phylogenetic affinities of several fossil taxa, within Mormyridae, and the position of Pantodon. In this paper we review the state of knowledge for osteoglossomorph fishes. We first provide an overview of the diversity of Osteoglossomorpha, and then discuss studies of the phylogeny of Osteoglossomorpha from both morphological and molecular perspectives, as well as biogeographic analyses of the group. Finally, we offer our perspectives on future needs for research on the systematic biology of Osteoglossomorpha. Keywords: Biogeography, Osteoglossidae, Paleontology, Phylogeny, Taxonomy. Os peixes da Superordem Osteoglossomorpha têm sido foco de inúmeros estudos sobre a morfologia, sistemática e evo- lução, particularmente devido à sua posição basal dentre os peixes teleósteos. -
The Fishesof Uganda-I
1'0 of the Pare (tagu vaIley.': __ THE FISHES OF UGANDA-I uku-BujukUf , high peaks' By P. H. GREENWOOD Fons Nilus'" East African Fisheries Research Organization ~xplorersof' . ;ton, Fresh_ CHAPTER I I\.bruzzi,Dr: knowledge : INTRODUCTION ~ss to it, the ,THE fishes of Uganda have been subject to considerable study. Apart from .h to take it many purely descriptive studies of the fishes themselves, three reports have . been published which deal with the ecology of the lakes in relation to fish and , fisheries (Worthington (1929a, 1932b): Graham (1929)).Much of the literature is scattered in various scientific journals, dating back to the early part of the ; century and is difficult to obtain iIi Uganda. The more recent reports also are out of print and virtually unobtainable. The purpose .of this present survey is to bring together the results of these many researches and to present, in the light of recent unpublished information, an account of the taxonomy and biology of the many fish species which are to be found in the lakes and rivers of Uganda. Particular attention has been paid to the provision of keys, so that most of the fishesmay be easily identified. It is hardly necessary to emphasize that our knowledge of the East African freshwater fishes is still in an early and exploratory stage of development. Much that has been written is known to be over-generalized, as conclusions were inevitably drawn from few and scattered observations or specimens. From the outset it must be stressed that the sections of this paper dealing with the classification and description of the fishes are in no sense a full tax- onomicrevision although many of the descriptions are based on larger samples than were previously available. -
Chitala Chitala) Ecological Risk Screening Summary
Clown Knifefish (Chitala chitala) Ecological Risk Screening Summary U.S. Fish & Wildlife Service, April 2011 Revised, February 2019 Web Version, 10/18/2019 Photo: Michal Klajban. Licensed under CC BY-SA 3.0. Available: https://commons.wikimedia.org/wiki/File:Ostravsk%C3%A1_ZOO,_chitala_chitala_(5).JPG. (February 2019). 1 Native Range and Status in the United States Native Range Froese and Pauly (2019): “Asia: Indus, Ganges-Brahmaputra and Mahanadi river basins in India. No valid records from Irrawaddy, Salween or other river basins of Myanmar. Reports of Chitala chitala from Thailand and Indo-China were based on Chitala ornata and those from Malaysia and Indonesia on Chitala lopis.” 1 From Chaudhry (2010): “Extant (resident) Bangladesh; India (Uttar Pradesh, Bihar, West Bengal, Tripura, Uttaranchal, Manipur, Assam); Nepal; Pakistan” “Presence Uncertain Cambodia; Indonesia; Malaysia; Myanmar” Status in the United States No wild or established populations of Chitala chitala have been recorded in the United States. No records of trade in C. chitala in the United States were found. Means of Introductions in the United States No wild or established populations of Chitala chitala have been recorded in the United States. Remarks No additional remarks. 2 Biology and Ecology Taxonomic Hierarchy and Taxonomic Standing According to Fricke et al. (2019), Chitala chitala (Hamilton 1822) is the current valid name for this species. It was originally described as Mystus chitala (Hamilton 1822) and has been known previously as Notopterus chitala (Hamilton -
Adiaha Alda Alex UGWUMBA (Nee EKPO) (B) NATIONALITY: Nigerian
CURRICULUM VITAE 1. (a) NAME: Adiaha Alda Alex UGWUMBA (Nee EKPO) (b) NATIONALITY: Nigerian (c) STATE OF ORIGIN: Akwa Ibom State, Nigeria (d) DATE OF BIRTH: 15 September 1956 (e) MARITAL STATUS: Married (f) NO OF CHILDREN: Two (g) EMPLOYER: University of Ibadan DEPARTMENT: Zoology FACULTY: Science (h) PRESENT POST: Professor (2007) (i) POSTAL ADDRESS: Department of Zoology, University of Ibadan, Ibadan, Oyo State (j) HOME ADDRESS: 19 Amina Way, University of Ibadan, Ibadan, Nigeria (k) EMAIL ADDRESS: [email protected] [email protected] [email protected] (l) TELEPHONE NO.: +2348023416143; +2348097308117; (n) NEXT OF KIN AND ADDRESS: Prof. O. A. Ugwumba Department of Zoology University of Ibadan Ibadan, Nigeria III. UNIVERSITY EDUCATION: (a) University of Ibadan: Undergraduate, 1976-1979 Postgraduate (Ph.D), 1985-1990 (b) University of Lagos: Postgraduate (M.Sc), 1980-1982 IV. ACADEMIC QUALIFICATIONS (WITH DATES & GRANTING BODIES): (a) B. Sc. (Zoology), Second Class Upper Division, University of Ibadan July1979 (b) M. Sc. (Zoology) (Area of specialization: Fisheries), University of Lagos July 1983 (c) Ph. D. (Zoology) (Area of specialization: Fisheries), University of Ibadan July 1990 V. PROFESSIONAL QUALIFICATION AND DIPLOMA (WITH DATES): Federal Marine Fisheries School Certificate on Instruction for Fisheries/Research Officers Sept. 1983. VI. SCHOLARSHIPS, FELLOWSHIPS AND PRIZES IN THE LAST TEN YEARS: Nigeria University Doctoral Thesis Award Scheme (NUDAS) -Supervisor of Best Doctoral Thesis in Biological Sciences within the Nigeria University System in 2007 VII. HONOURS, DISTINCTIONS AND MEMBERSHIP OF LEARNED SOCIETIES: 1 a. Fellow, Fisheries Society of Nigeria (Ffs) b. Fellow, Zoological Society of Nigeria (Fzsn) c. Member, Nigerian Association of Aquatic Sciences d. -
Teleostei, Osteoglossiformes) in the Continental Lower Cretaceous of the Democratic Republic of Congo (Central Africa
Geo-Eco-Trop., 2015, 39, 2 : 247-254 On the presence of a second osteoglossid fish (Teleostei, Osteoglossiformes) in the continental Lower Cretaceous of the Democratic Republic of Congo (Central Africa) Sur la présence d’un second poisson ostéoglossidé (Teleostei, Osteoglossiformes) dans le Crétacé inférieur continental de la République Démocratique du Congo (Afrique centrale) Louis TAVERNE 1 Résumé: Un hyomandibulaire de téléostéen découvert dans les couches de la Formation de la Loia (Aptien- Albien continental) à Yakoko, sur la rivière Lomami, Province Centrale, République Démocratique du Congo, est décrit et ses relations phylogénétiques sont discutées. L’os est grand et porte un processus operculaire très allongé. Des comparaisons avec d’autres téléostéens du Crétacé inférieur continental indiquent que cet hyomandibulaire appartient à un ostéoglossidé qui semble proche de Paralycoptera. Mots-clés: Teleostei, Osteoglossidae, hyomandibulaire, Formation de la Loia, Crétacé inférieur continental, Yakoko, République Démocratique du Congo Abstract: A teleost hyomandibula discovered in the deposits of the Loia Formation (continental Aptian- Albian) at Yakoko, on the Lomami River, Central Province, Democratic Republic of Congo, is described and its phylogenetic relationships are discussed. The bone is rather large and bears an extremely long opercular process. Comparisons with other freshwater Early Cretaceous teleosts indicate that this hyomandibula belongs to an osteoglossid fish that seems close to Paralycoptera. Key words: Teleostei, Osteoglossidae, hyomandibula, Loia Formation, continental Early Cretaceous, Yakoko, Democratic Republic of Congo. INTRODUCTION The Loia and the Bokungu Formations are respectively the lower and the upper strata within the continental Early Cretaceous deposits of the Congolese Cuvette and the surrounding zones, in the Democratic Republic of Congo (CAHEN et al., 1959, 1960; CASIER, 1961). -
A Review of the Systematic Biology of Fossil and Living Bony-Tongue Fishes, Osteoglossomorpha (Actinopterygii: Teleostei)" (2018)
W&M ScholarWorks VIMS Articles Virginia Institute of Marine Science 2018 A review of the systematic biology of fossil and living bony- tongue fishes, Osteoglossomorpha (Actinopterygii: Teleostei) Eric J. Hilton Virginia Institute of Marine Science Sebastien Lavoue Follow this and additional works at: https://scholarworks.wm.edu/vimsarticles Part of the Aquaculture and Fisheries Commons Recommended Citation Hilton, Eric J. and Lavoue, Sebastien, "A review of the systematic biology of fossil and living bony-tongue fishes, Osteoglossomorpha (Actinopterygii: Teleostei)" (2018). VIMS Articles. 1297. https://scholarworks.wm.edu/vimsarticles/1297 This Article is brought to you for free and open access by the Virginia Institute of Marine Science at W&M ScholarWorks. It has been accepted for inclusion in VIMS Articles by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. Neotropical Ichthyology, 16(3): e180031, 2018 Journal homepage: www.scielo.br/ni DOI: 10.1590/1982-0224-20180031 Published online: 11 October 2018 (ISSN 1982-0224) Copyright © 2018 Sociedade Brasileira de Ictiologia Printed: 30 September 2018 (ISSN 1679-6225) Review article A review of the systematic biology of fossil and living bony-tongue fishes, Osteoglossomorpha (Actinopterygii: Teleostei) Eric J. Hilton1 and Sébastien Lavoué2,3 The bony-tongue fishes, Osteoglossomorpha, have been the focus of a great deal of morphological, systematic, and evolutio- nary study, due in part to their basal position among extant teleostean fishes. This group includes the mooneyes (Hiodontidae), knifefishes (Notopteridae), the abu (Gymnarchidae), elephantfishes (Mormyridae), arawanas and pirarucu (Osteoglossidae), and the African butterfly fish (Pantodontidae). This morphologically heterogeneous group also has a long and diverse fossil record, including taxa from all continents and both freshwater and marine deposits. -
Deciphering the Evolutionary History of Arowana Fishes (Teleostei, Osteoglossiformes, Osteoglossidae): Insight from Comparative Cytogenomics
International Journal of Molecular Sciences Article Deciphering the Evolutionary History of Arowana Fishes (Teleostei, Osteoglossiformes, Osteoglossidae): Insight from Comparative Cytogenomics Marcelo de Bello Cioffi 1, Petr Ráb 2, Tariq Ezaz 3 , Luiz Antonio Carlos Bertollo 1, Sebastien Lavoué 4, Ezequiel Aguiar de Oliveira 1,5 , Alexandr Sember 2, Wagner Franco Molina 6, Fernando Henrique Santos de Souza 1 , Zuzana Majtánová 2 , Thomas Liehr 7,*, Ahmed Basheer Hamid Al-Rikabi 7, Cassia Fernanda Yano 1, Patrik Viana 8 , Eliana Feldberg 8, Peter Unmack 3 , Terumi Hatanaka 1, Alongklod Tanomtong 9 and Manolo Fernandez Perez 1 1 Departamento de Genética e Evolução, Universidade Federal de São Carlos (UFSCar), São Carlos, SP 13565-090, Brazil 2 Laboratory of Fish Genetics, Institute of Animal Physiology and Genetics, Czech Academy of Sciences, 27721 Libˇechov, Czech Republic 3 Institute for Applied Ecology, University of Canberra, Canberra, ACT 2617, Australia 4 School of Biological Sciences, Universiti Sains Malaysia, Penang 11800, Malaysia 5 Secretaria de Estado de Educação de Mato Grosso – SEDUC-MT, Cuiabá, MT 78049-909, Brazil 6 Departamento de Biologia Celular e Genética, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Natal, RN 59078-970, Brazil 7 Institute of Human Genetics, University Hospital Jena, 07747 Jena, Germany 8 Instituto Nacional de Pesquisas da Amazônia, Coordenação de Biodiversidade, Laboratório de Genética Animal, Petrópolis, Manaus, AM 69077-000, Brazil 9 Toxic Substances in Livestock and Aquatic Animals Research Group, KhonKaen University, Muang, KhonKaen 40002, Thailand * Correspondence: [email protected] Received: 13 August 2019; Accepted: 30 August 2019; Published: 2 September 2019 Abstract: Arowanas (Osteoglossinae) are charismatic freshwater fishes with six species and two genera (Osteoglossum and Scleropages) distributed in South America, Asia, and Australia. -
Historical Background of the Trust
TRANSYLVANIAN REVIEW OF SYSTEMATICAL AND ECOLOGICAL RESEARCH 17.2 The Wetlands Diversity Editors Angela Curtean-Bănăduc & Doru Bănăduc Sibiu ‒ Romania 2015 TRANSYLVANIAN REVIEW OF SYSTEMATICAL AND ECOLOGICAL RESEARCH 17.2 The Wetlands Diversity Editors Angela Curtean-Bănăduc & Doru Bănăduc “Lucian Blaga” University of Sibiu, Faculty of Sciences, Department of Ecology and Environment Protection Published based mainly on some of the scientific materials presented at the fourth “Aquatic Biodiversity International Conference” ‒ Sibiu/Romania 2015 ESENIAS Ecotur Sibiu “Lucian Blaga” International East and South N.G.O. University Association for Danube European network for of Sibiu Research Invasive Alien Species Sibiu ‒ Romania 2015 Scientifical Reviewers John Robert AKEROYD Sherkin Island Marine Station, Sherkin Island ‒ Ireland. Doru BĂNĂDUC “Lucian Blaga” University of Sibiu, Sibiu ‒ Romania. Alexandru BURCEA “Lucian Blaga” University of Sibiu, Sibiu ‒ Romania. Bill CHAMBERS Liverpool Hope University, Liverpool ‒ United Kingdom. Kevin CIANFAGLIONE University of Camerino, Camerino ‒ Italy. Angela CURTEAN-BĂNĂDUC “Lucian Blaga” University of Sibiu, Sibiu ‒ Romania. Laurisse FRAMPTON Australian Rivers Institute, Griffith University, Nathan, Queensland ‒ Australia. Andréa GALOTTI CEACTierra – University of Jaén, Jaén ‒ Spain. Marian-Traian GOMOIU Romanian Academy, Bucharest ‒ Romania. Thomas HEIN Austrian Academy of Sciences, Institute for Limnology, Mondsee ‒ Austria. Georg Albert JANAUER University of Vienna, Vienna ‒ Austria. Mike JOY Te Kura Matauranga o nga Taonga a Papatuanuku Massey University, Palmerston North ‒ New Zealand. Mirjana LENHARDT Institute for Biological Research, Belgrade ‒ Serbia. Weronika MAŚLANKO University of Life Science of Lublin, Lublin – Poland. Skyler PAULI Montana University, Missula ‒ United States of America. Eckbert SCHNEIDER Karlsruhe University, Institute for Waters and River Basin Management, Rastatt ‒ Germay. Teodora TRICHKOVA Bulgarian Academy of Sciences, Institute of Zoology, Sofia ‒ Bulgaria. -
Kinematics of Ribbonfin Locomotion in the Bowfin, Amia Calva
RESEARCH ARTICLE Kinematics of Ribbon‐Fin Locomotion in the Bowfin, Amia calva 1,2 KEVIN JAGNANDAN * AND CHRISTOPHER P. SANFORD1 1Department of Biology, Hofstra University, Hempstead, New York 2Department of Evolution, Ecology and Organismal Biology, University of California, Riverside, California ABSTRACT An elongated dorsal and/or anal ribbon‐fin to produce forward and backward propulsion has independently evolved in several groups of fishes. In these fishes, fin ray movements along the fin generate a series of waves that drive propulsion. There are no published data on the use of the dorsal ribbon‐fin in the basal freshwater bowfin, Amia calva. In this study, frequency, amplitude, wavelength, and wave speed along the fin were measured in Amia swimming at different speeds (up to 1.0 body length/sec) to understand how the ribbon‐fin generates propulsion. These wave properties were analyzed to (1) determine whether regional specialization occurs along the ribbon‐ fin, and (2) to reveal how the undulatory waves are used to control swimming speed. Wave properties were also compared between swimming with sole use of the ribbon‐fin, and swimming with simultaneous use of the ribbon and pectoral fins. Statistical analysis of ribbon‐fin kinematics revealed no differences in kinematic patterns along the ribbon‐fin, and that forward propulsive speed in Amia is controlled by the frequency of the wave in the ribbon‐fin, irrespective of the contribution of the pectoral fin. This study is the first kinematic analysis of the ribbon‐fin in a basal fish and the model species for Amiiform locomotion, providing a basis for understanding ribbon‐fin locomotion among a broad range of teleosts.