South San Francisco Bay Invertebrate Guide
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Rapid Assessment Shore Survey for Exotic Species in San Francisco Bay - May 2004
Rapid Assessment Shore Survey for Exotic Species in San Francisco Bay - May 2004 Andrew N. Cohen, San Francisco Estuary Institute, Oakland, CA Dale R. Calder, Royal Ontario Museum, Toronto, Ontario James T. Carlton, Williams College/Mystic Seaport–Maritime Studies Program, Mystic, CT John W. Chapman, Oregon State University/Hatfield Marine Science Center, Newport, OR Leslie H. Harris, Natural History Museum of Los Angeles County, Los Angeles, CA Taiju Kitayama, Tokyo National Science Museum, Tokyo, Japan Charles C. Lambert, University of Washington/Friday Harbor Laboratory, Friday Harbor, WA Gretchen Lambert, University of Washington/Friday Harbor Laboratory, Friday Harbor, WA Christina Piotrowski, California Academy of Science, San Francisco, CA Michelle Shouse, U.S. Geological Survey, Menlo Park, CA Luis A. Solórzano, U.S. Food and Drug Administration, Alameda, CA Conducted for the California State Coastal Conservancy, Oakland, CA; San Francisco Bay- Delta Science Consortium and Association of Bay Area Governments, Oakland, CA; National Geographic Society, Washington, DC; and the Rose Foundation, Oakland, CA. Cite as: Cohen, A.N., D.R. Calder, J.T. Carlton, J.W. Chapman, L.H. Harris, T. Kitayama, C.C. Lambert, G. Lambert, C. Piotrowski, M. Shouse and L.A. Solórzano. 2005. Rapid Assessment Shore Survey for Exotic Species in San Francisco Bay - May 2004. Final Report for the California State Coastal Conservancy, Association of Bay Area Governments/San Francisco Bay-Delta Science Consortium, National Geographic Society and Rose Foundation. San Francisco Estuary Institute, Oakland, CA. Introduction Exotic species constitute one of the main environmental stressors in the San Francisco Estuary. To further assess the extent of this problem, we conducted a Rapid Assessment (RA) survey of exotic species at shoreline stations in San Francisco Bay in the spring of 2004. -
COMPLETE LIST of MARINE and SHORELINE SPECIES 2012-2016 BIOBLITZ VASHON ISLAND Marine Algae Sponges
COMPLETE LIST OF MARINE AND SHORELINE SPECIES 2012-2016 BIOBLITZ VASHON ISLAND List compiled by: Rayna Holtz, Jeff Adams, Maria Metler Marine algae Number Scientific name Common name Notes BB year Location 1 Laminaria saccharina sugar kelp 2013SH 2 Acrosiphonia sp. green rope 2015 M 3 Alga sp. filamentous brown algae unknown unique 2013 SH 4 Callophyllis spp. beautiful leaf seaweeds 2012 NP 5 Ceramium pacificum hairy pottery seaweed 2015 M 6 Chondracanthus exasperatus turkish towel 2012, 2013, 2014 NP, SH, CH 7 Colpomenia bullosa oyster thief 2012 NP 8 Corallinales unknown sp. crustous coralline 2012 NP 9 Costaria costata seersucker 2012, 2014, 2015 NP, CH, M 10 Cyanoebacteria sp. black slime blue-green algae 2015M 11 Desmarestia ligulata broad acid weed 2012 NP 12 Desmarestia ligulata flattened acid kelp 2015 M 13 Desmerestia aculeata (viridis) witch's hair 2012, 2015, 2016 NP, M, J 14 Endoclaydia muricata algae 2016 J 15 Enteromorpha intestinalis gutweed 2016 J 16 Fucus distichus rockweed 2014, 2016 CH, J 17 Fucus gardneri rockweed 2012, 2015 NP, M 18 Gracilaria/Gracilariopsis red spaghetti 2012, 2014, 2015 NP, CH, M 19 Hildenbrandia sp. rusty rock red algae 2013, 2015 SH, M 20 Laminaria saccharina sugar wrack kelp 2012, 2015 NP, M 21 Laminaria stechelli sugar wrack kelp 2012 NP 22 Mastocarpus papillatus Turkish washcloth 2012, 2013, 2014, 2015 NP, SH, CH, M 23 Mazzaella splendens iridescent seaweed 2012, 2014 NP, CH 24 Nereocystis luetkeana bull kelp 2012, 2014 NP, CH 25 Polysiphonous spp. filamentous red 2015 M 26 Porphyra sp. nori (laver) 2012, 2013, 2015 NP, SH, M 27 Prionitis lyallii broad iodine seaweed 2015 M 28 Saccharina latissima sugar kelp 2012, 2014 NP, CH 29 Sarcodiotheca gaudichaudii sea noodles 2012, 2014, 2015, 2016 NP, CH, M, J 30 Sargassum muticum sargassum 2012, 2014, 2015 NP, CH, M 31 Sparlingia pertusa red eyelet silk 2013SH 32 Ulva intestinalis sea lettuce 2014, 2015, 2016 CH, M, J 33 Ulva lactuca sea lettuce 2012-2016 ALL 34 Ulva linza flat tube sea lettuce 2015 M 35 Ulva sp. -
Zootaxa, Mollusca, Goniodorididae, Okenia
ZOOTAXA 695 Further species of the opisthobranch genus Okenia (Nudibranchia: Goniodorididae) from the Indo-West Pacific W.B. RUDMAN Magnolia Press Auckland, New Zealand W.B. RUDMAN Further species of the opisthobranch genus Okenia (Nudibranchia: Goniodorididae) from the Indo-West Pacific (Zootaxa 695) 70 pp.; 30 cm. 25 October 2004 ISBN 1-877354-68-6 (Paperback) ISBN 1-877354-69-4 (Online edition) FIRST PUBLISHED IN 2004 BY Magnolia Press P.O. Box 41383 Auckland 1030 New Zealand e-mail: [email protected] http://www.mapress.com/zootaxa/ © 2004 Magnolia Press All rights reserved. No part of this publication may be reproduced, stored, transmitted or disseminated, in any form, or by any means, without prior written permission from the publisher, to whom all requests to reproduce copyright material should be directed in writing. This authorization does not extend to any other kind of copying, by any means, in any form, and for any purpose other than private research use. ISSN 1175-5326 (Print edition) ISSN 1175-5334 (Online edition) Zootaxa 695: 1–70 (2004) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA 695 Copyright © 2004 Magnolia Press ISSN 1175-5334 (online edition) Further species of the opisthobranch genus Okenia (Nudibranchia: Goniodorididae) from the Indo-West Pacific W.B. RUDMAN The Australian Museum, 6 College St., Sydney, NSW 2010, Australia. E-mail: [email protected]. Table of Contents Abstract . 3 Introduction. 4 Materials and Methods . 5 Descriptions . 5 Okenia Menke, 1830. 5 Okenia echinata Baba, 1949. 6 Okenia purpurata sp. nov. 9 Okenia vena sp. nov.. 13 Okenia virginiae Gosliner, 2004. -
Bryozoan Genera Fenestrulina and Microporella No Longer Confamilial; Multi-Gene Phylogeny Supports Separation
Zoological Journal of the Linnean Society, 2019, 186, 190–199. With 2 figures. Bryozoan genera Fenestrulina and Microporella no longer confamilial; multi-gene phylogeny supports separation RUSSELL J. S. ORR1*, ANDREA WAESCHENBACH2, EMILY L. G. ENEVOLDSEN3, Downloaded from https://academic.oup.com/zoolinnean/article/186/1/190/5096936 by guest on 29 September 2021 JEROEN P. BOEVE3, MARIANNE N. HAUGEN3, KJETIL L. VOJE3, JOANNE PORTER4, KAMIL ZÁGORŠEK5, ABIGAIL M. SMITH6, DENNIS P. GORDON7 and LEE HSIANG LIOW1,3 1Natural History Museum, University of Oslo, Oslo, Norway 2Department of Life Sciences, Natural History Museum, London, UK 3Centre for Ecological & Evolutionary Synthesis, Department of Biosciences, University of Oslo, Oslo, Norway 4Centre for Marine Biodiversity and Biotechnology, School of Life Sciences, Heriot Watt University, Edinburgh, UK 5Department of Geography, Technical University of Liberec, Czech Republic 6Department of Marine Science, University of Otago, Dunedin, New Zealand 7National Institute of Water and Atmospheric Research, Wellington, New Zealand Received 25 March 2018; revised 28 June 2018; accepted for publication 11 July 2018 Bryozoans are a moderately diverse, mostly marine phylum with a fossil record extending to the Early Ordovician. Compared to other phyla, little is known about their phylogenetic relationships at both lower and higher taxonomic levels. Hence, an effort is being made to elucidate their phylogenetic relationships. Here, we present newly sequenced nuclear and mitochondrial genes for 21 cheilostome bryozoans. Combining these data with existing orthologous molecular data, we focus on reconstructing the phylogenetic relationships of Fenestrulina and Microporella, two species-rich genera. They are currently placed in Microporellidae, defined by having a semicircular primary orifice and a proximal ascopore. -
Part I. an Annotated Checklist of Extant Brachyuran Crabs of the World
THE RAFFLES BULLETIN OF ZOOLOGY 2008 17: 1–286 Date of Publication: 31 Jan.2008 © National University of Singapore SYSTEMA BRACHYURORUM: PART I. AN ANNOTATED CHECKLIST OF EXTANT BRACHYURAN CRABS OF THE WORLD Peter K. L. Ng Raffles Museum of Biodiversity Research, Department of Biological Sciences, National University of Singapore, Kent Ridge, Singapore 119260, Republic of Singapore Email: [email protected] Danièle Guinot Muséum national d'Histoire naturelle, Département Milieux et peuplements aquatiques, 61 rue Buffon, 75005 Paris, France Email: [email protected] Peter J. F. Davie Queensland Museum, PO Box 3300, South Brisbane, Queensland, Australia Email: [email protected] ABSTRACT. – An annotated checklist of the extant brachyuran crabs of the world is presented for the first time. Over 10,500 names are treated including 6,793 valid species and subspecies (with 1,907 primary synonyms), 1,271 genera and subgenera (with 393 primary synonyms), 93 families and 38 superfamilies. Nomenclatural and taxonomic problems are reviewed in detail, and many resolved. Detailed notes and references are provided where necessary. The constitution of a large number of families and superfamilies is discussed in detail, with the positions of some taxa rearranged in an attempt to form a stable base for future taxonomic studies. This is the first time the nomenclature of any large group of decapod crustaceans has been examined in such detail. KEY WORDS. – Annotated checklist, crabs of the world, Brachyura, systematics, nomenclature. CONTENTS Preamble .................................................................................. 3 Family Cymonomidae .......................................... 32 Caveats and acknowledgements ............................................... 5 Family Phyllotymolinidae .................................... 32 Introduction .............................................................................. 6 Superfamily DROMIOIDEA ..................................... 33 The higher classification of the Brachyura ........................ -
ISOLATION and IDENTIFICATION of SECONDARY METABOLITES from the BRYOZOAN Cryptosula Zavjalovensis from HOKKAIDO, JAPAN
LOVEILLE JUN AMARILLE GONZAGA ISOLATION AND IDENTIFICATION OF SECONDARY METABOLITES FROM THE BRYOZOAN Cryptosula zavjalovensis FROM HOKKAIDO, JAPAN UNIVERSIDADE DO ALGARVE FACULDADE DE CIÊNCIAS E TECNOLOGIA 2017 LOVEILLE JUN AMARILLE GONZAGA ISOLATION AND IDENTIFICATION OF SECONDARY METABOLITES FROM THE BRYOZOAN Cryptosula zavjalovensis FROM HOKKAIDO, JAPAN Erasmus Mundus MSc in Chemical Innovation and Regulation Mestrado Erasmus Mundus em Inovação Química e Regulamentação Trabalho efetuado sob a orientação de: Work supervised by: Prof. Isabel Cavaco (Universidade do Algarve) Prof. Helena Fortunato (Hokkaido University) UNIVERSIDADE DO ALGARVE FACULDADE DE CIÊNCIAS E TECNOLOGIA 2017 DECLARATION OF AUTHORSHIP ISOLATION AND IDENTIFICATION OF SECONDARY METABOLITES FROM THE BRYOZOAN Cryptosula zavjalovensis FROM HOKKAIDO, JAPAN I declare that I am the author of this work, which is original. The work cites other authors and works, which are adequately referred in the text and are listed in the bibliography. ____________________________________ Loveille Jun A. Gonzaga Copyright: Loveille Jun A. Gonzaga. The University of Algarve has the right to keep and publicize this work through printed copies in paper of digital form, or any other means of reproduction, to disseminate it in scientific repositories and to allow its copy and distribution with educational and/or research objectives, as long as they are non- commercial and give credit to the author and editor. I ACKNOWLEDGEMENTS I would like to extend my heartfelt gratitude to everyone who have been part of my Erasmus Mundus journey. The academic part of it might be concluded with this research work but the journey continues. This work wouldn’t have been possible without the immense help of such amazing people, so I would like to take this opportunity to thank: The European Commission and the EMMC-ChIR program for giving me this opportunity to pursue a relevant and timely international master’s program. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Larval Morphology of the Spider Crab Leurocyclus Tuberculosus (Decapoda: Majoidea: Inachoididae)
Nauplius 17(1): 49-58, 2009 49 Larval morphology of the spider crab Leurocyclus tuberculosus (Decapoda: Majoidea: Inachoididae) William Santana and Fernando Marques (WS) Museu de Zoologia, Universidade de São Paulo, Avenida Nazaré, 481, Ipiranga, 04263-000, São Paulo, SP, Brasil. E-mail: [email protected] (FM) Universidade de São Paulo, Departamento de Zoologia, Instituto de Biociências, Caixa Postal 11461, 05588-090, São Paulo, SP, Brasil. E-mail: [email protected] Abstract Within the recently resurrected family Inachoididae is Leurocyclus tuberculosus, an inachoidid spider crab distributed throughout the Western Atlantic of South America from Brazil to Argentina (including Patagonia), and along the Eastern Pacific coast of Chile. The larval development of L. tuberculosus consists of two zoeal stages and one megalopa. We observed that the larval morphology of L. tuberculosus conforms to the general pattern found in Majoidea by having two zoeal stages, in which the first stage has nine or more seta on the scaphognatite of the maxilla, and the second zoeal stage present well developed pleopods. Here, we describe the larval morphology of L. tuberculosus and compare with other inachoidid members for which we have larval information. Key words: Larval development, Majidae, Zoeal stages, Megalopa, Crustacea, Leurocyclus. Introduction described. Larval stages of Anasimus latus Rath- bun, 1894 was the first one to be described by Few decades ago, the family Inachoididae Sandifer and Van Engel (1972). Following, Web- Dana, 1851 was resurrected by Drach and Gui- ber and Wear (1981) and Terada (1983) described not (1983; see also Drach and Guinot, 1982), the first zoeal stage of Pyromaia tuberculata (Lock- who considered that the morphological modifica- ington, 1877), which was completely described tions on the carapace and endophragmal skeleton by Fransozo and Negreiros-Fransozo (1997) and among some majoid genera granted to a set of re-described by Luppi and Spivak (2003). -
Appendix 3 Marine Spcies Lists
Appendix 3 Marine Species Lists with Abundance and Habitat Notes for Provincial Helliwell Park Marine Species at “Wall” at Flora Islet and Reef Marine Species at Norris Rocks Marine Species at Toby Islet Reef Marine Species at Maude Reef, Lambert Channel Habitats and Notes of Marine Species of Helliwell Provincial Park Helliwell Provincial Park Ecosystem Based Plan – March 2001 Marine Species at wall at Flora Islet and Reef Common Name Latin Name Abundance Notes Sponges Cloud sponge Aphrocallistes vastus Abundant, only local site occurance Numerous, only local site where Chimney sponge, Boot sponge Rhabdocalyptus dawsoni numerous Numerous, only local site where Chimney sponge, Boot sponge Staurocalyptus dowlingi numerous Scallop sponges Myxilla, Mycale Orange ball sponge Tethya californiana Fairly numerous Aggregated vase sponge Polymastia pacifica One sighting Hydroids Sea Fir Abietinaria sp. Corals Orange sea pen Ptilosarcus gurneyi Numerous Orange cup coral Balanophyllia elegans Abundant Zoanthids Epizoanthus scotinus Numerous Anemones Short plumose anemone Metridium senile Fairly numerous Giant plumose anemone Metridium gigantium Fairly numerous Aggregate green anemone Anthopleura elegantissima Abundant Tube-dwelling anemone Pachycerianthus fimbriatus Abundant Fairly numerous, only local site other Crimson anemone Cribrinopsis fernaldi than Toby Islet Swimming anemone Stomphia sp. Fairly numerous Jellyfish Water jellyfish Aequoria victoria Moon jellyfish Aurelia aurita Lion's mane jellyfish Cyanea capillata Particuilarly abundant -
Sponge Community Structure and Anti-Predator Defenses on Temperate Reefs of the South Atlantic Bight
Georgia Southern University Digital Commons@Georgia Southern Electronic Theses and Dissertations Graduate Studies, Jack N. Averitt College of Fall 2005 Sponge Community Structure and Anti-Predator Defenses on Temperate Reefs of the South Atlantic Bight Richard Robert Ruzicka Follow this and additional works at: https://digitalcommons.georgiasouthern.edu/etd Recommended Citation Ruzicka, Richard Robert, "Sponge Community Structure and Anti-Predator Defenses on Temperate Reefs of the South Atlantic Bight" (2005). Electronic Theses and Dissertations. 705. https://digitalcommons.georgiasouthern.edu/etd/705 This thesis (open access) is brought to you for free and open access by the Graduate Studies, Jack N. Averitt College of at Digital Commons@Georgia Southern. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of Digital Commons@Georgia Southern. For more information, please contact [email protected]. SPONGE COMMUNITY STRUCTURE AND ANTI-PREDATOR DEFENSES ON TEMPERATES REEFS OF THE SOUTH ATLANTIC BIGHT by RICHARD ROBERT RUZICKA III Under the Direction of Daniel F. Gleason ABSTRACT The interaction between predation and anti-predator defenses of prey is important in shaping community structure in all ecosystems. This study examined the relationship between sponge predation and the distribution of sponge anti-predator defenses on temperate reefs in the South Atlantic Bight. Significant differences in the distribution of sponge species, sponge densities, and densities of sponge predators were documented across two adjacent reef habitats. Significant differences also occurred in the distribution of sponge chemical and structural defenses with chemical deterrence significantly greater in sponges associated with the habitat having higher predation intensity. Structural defenses, although effective in some instances, appear to be inadequate against spongivorous predators thereby restricting the distribution of sponge species lacking chemical defenses to habitats with lower predation intensity. -
Appendix C - Invertebrate Population Attributes
APPENDIX C - INVERTEBRATE POPULATION ATTRIBUTES C1. Taxonomic list of megabenthic invertebrate species collected C2. Percent area of megabenthic invertebrate species by subpopulation C3. Abundance of megabenthic invertebrate species by subpopulation C4. Biomass of megabenthic invertebrate species by subpopulation C- 1 C1. Taxonomic list of megabenthic invertebrate species collected on the southern California shelf and upper slope at depths of 2-476m, July-October 2003. Taxon/Species Author Common Name PORIFERA CALCEREA --SCYCETTIDA Amphoriscidae Leucilla nuttingi (Urban 1902) urn sponge HEXACTINELLIDA --HEXACTINOSA Aphrocallistidae Aphrocallistes vastus Schulze 1887 cloud sponge DEMOSPONGIAE Porifera sp SD2 "sponge" Porifera sp SD4 "sponge" Porifera sp SD5 "sponge" Porifera sp SD15 "sponge" Porifera sp SD16 "sponge" --SPIROPHORIDA Tetillidae Tetilla arb de Laubenfels 1930 gray puffball sponge --HADROMERIDA Suberitidae Suberites suberea (Johnson 1842) hermitcrab sponge Tethyidae Tethya californiana (= aurantium ) de Laubenfels 1932 orange ball sponge CNIDARIA HYDROZOA --ATHECATAE Tubulariidae Tubularia crocea (L. Agassiz 1862) pink-mouth hydroid --THECATAE Aglaopheniidae Aglaophenia sp "hydroid" Plumulariidae Plumularia sp "seabristle" Sertulariidae Abietinaria sp "hydroid" --SIPHONOPHORA Rhodaliidae Dromalia alexandri Bigelow 1911 sea dandelion ANTHOZOA --ALCYONACEA Clavulariidae Telesto californica Kükenthal 1913 "soft coral" Telesto nuttingi Kükenthal 1913 "anemone" Gorgoniidae Adelogorgia phyllosclera Bayer 1958 orange gorgonian Eugorgia -
HABITAT TYPE and ASSOCIATED BIOLOGICAL ASSEMBLAGES – Shellfish Beds Sculpins, Rockfish, Perch and Herring
HABITAT TYPE AND ASSOCIATED BIOLOGICAL ASSEMBLAGES – Shellfish Beds sculpins, rockfish, perch and herring. Hard substrates are arenaria. Sutton (1978) also delineated beds of the rough an important feeding habitat for harbor seals, including piddock (Zirfaea pilsbryi), a native clam that bores into from the Golden Gate east to Treasure Island, northwest soft rock or clays, as a potential species for sport harvest, to Tiburon Peninsula, and southward to Yerba Buena and suggested that there may be significant subtidal beds Island (Goals Project 2000, Green et al. 2006). Also, of the native bentnose clam (Macoma nasuta), which was many harbor seal haul-out sites are located in close commonly harvested by Native Americans. Some studies proximity to subtidal hard substrate including Point refer in passing to beds of the exotic freshwater Asiatic Bonita, Castro Rocks, Yerba Buena Island, and Angel clam (Corbicula fluminea; harvested for food or bait), Island (Goals Project 2000). Sea lions also feed in deep, native California mussel (Mytilus californianus), bay marine waters of San Francisco Bay; however, they feed mussel (consisting of the native M. trossulus, the exotic M. mostly on seasonally abundant herring associated with galloprovincialis, and their hybrids), exotic ribbed hard structures and eel grass beds in the Central Bay, and horsemussel (Geukensia demissa), native ghost shrimp on spawning salmonids that are migrating up the Bay (Neotrypaea californica), and the blue mud shrimp across multiple habitats to freshwater tributaries. Pacific (Upogebia pugettensis). Jones & Stokes (1977) and Sutton herring is a major prey item for many marine mammal (1978) implied that the ribbed horsemussel might be a species that are drawn to the Bay, including harbor sport-harvested species in the San Francisco Bay.