Section 1. Cotton (Gossypium Spp.)
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Natural Materials for the Textile Industry Alain Stout
English by Alain Stout For the Textile Industry Natural Materials for the Textile Industry Alain Stout Compiled and created by: Alain Stout in 2015 Official E-Book: 10-3-3016 Website: www.TakodaBrand.com Social Media: @TakodaBrand Location: Rotterdam, Holland Sources: www.wikipedia.com www.sensiseeds.nl Translated by: Microsoft Translator via http://www.bing.com/translator Natural Materials for the Textile Industry Alain Stout Table of Contents For Word .............................................................................................................................. 5 Textile in General ................................................................................................................. 7 Manufacture ....................................................................................................................... 8 History ................................................................................................................................ 9 Raw materials .................................................................................................................... 9 Techniques ......................................................................................................................... 9 Applications ...................................................................................................................... 10 Textile trade in Netherlands and Belgium .................................................................... 11 Textile industry ................................................................................................................... -
Stable and Widespread Structural Heteroplasmy in Chloroplast Genomes Revealed by a New Long-Read Quantification Method
bioRxiv preprint doi: https://doi.org/10.1101/692798; this version posted July 11, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Classification: Biological Sciences, Evolution Title: Stable and widespread structural heteroplasmy in chloroplast genomes revealed by a new long-read quantification method Weiwen Wang a, Robert Lanfear a a Research School of Biology, Australian National University, Canberra, ACT, Australia, 2601 Corresponding Author: Weiwen Wang, [email protected] Robert Lanfear, [email protected], +61 2 6125 2536 Keywords: Single copy inversion, flip-flop recombination, chloroplast genome structural heteroplasmy 1 bioRxiv preprint doi: https://doi.org/10.1101/692798; this version posted July 11, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Abstract 2 The chloroplast genome usually has a quadripartite structure consisting of a large 3 single copy region and a small single copy region separated by two long inverted 4 repeats. It has been known for some time that a single cell may contain at least two 5 structural haplotypes of this structure, which differ in the relative orientation of the 6 single copy regions. However, the methods required to detect and measure the 7 abundance of the structural haplotypes are labour-intensive, and this phenomenon 8 remains understudied. -
Gossypium Barbadense: an Approach for in Situ Conservation in Cerrado, Brazil
Journal of Agricultural Science; Vol. 8, No. 8; 2016 ISSN 1916-9752 E-ISSN 1916-9760 Published by Canadian Center of Science and Education Gossypium barbadense: An Approach for in Situ Conservation in Cerrado, Brazil Andrezza Arantes Castro1, Lúcia Vieira Hoffmann2, Thiago Henrique Lima1, Aryanny Irene Domingos Oliveira1, Rafaela Ribeiro Brito1, Letícia de Maria Oliveira Mendes1, Caio César Oliveira Pereira1, Guilherme Malafaia1 & Ivandilson Pessoa Pinto de Menezes1 1 Genetic Molecular Laboratory, Instituto Federal Goiano, Urutaí, Goiás, Brazil 2 Embrapa Algodão, Campina Grande, Paraíba, Brazil Correspondence: Ivandilson Pessoa Pinto de Menezes, School Genetic Molecular Laboratory, Instituto Federal Goiano, Urutaí, Brazil. Tel: 55-64-9279-9708. E-mail: [email protected] Received: May 27, 2016 Accepted: June 16, 2016 Online Published: July 15, 2016 doi:10.5539/jas.v8n8p59 URL:http://dx.doi.org/10.5539/jas.v8n8p59 Abstract Abandonment of planting of Gossypium barbadense has endangered its existence. The objective was to determine the characteristicof the maintenance of Gossypium barbadense in the Central-West Region of Brazil, with the aim to foster the conservation of the species. Expeditions were conducted in 2014-2015 in Southeast Goiás, where cotton collection has not been reported before. Data from previous collections in Goiás, Mato Grosso, Mato Grosso do Sul and Distrito Federal available in Albrana database were considered this study. In the Central-West Region of Brazil, 466 accesses of G. barbadense were recorded, found most frequently in backyards (91.4%), but also spontaneous plants (7.5%), farm boundary (0.8%) and commercial farming (0.2%) have also been found. The main use indicated by VDU was as medicinal plant (0.66), therefore this is the main reason for in situ preservation. -
Complete Sequence of Kenaf (Hibiscus Cannabinus)
www.nature.com/scientificreports OPEN Complete sequence of kenaf (Hibiscus cannabinus) mitochondrial genome and comparative analysis Received: 2 November 2017 Accepted: 27 July 2018 with the mitochondrial genomes of Published: xx xx xxxx other plants Xiaofang Liao1,2,3, Yanhong Zhao3, Xiangjun Kong2, Aziz Khan2, Bujin Zhou 2, Dongmei Liu4, Muhammad Haneef Kashif2, Peng Chen2, Hong Wang5 & Ruiyang Zhou2 Plant mitochondrial (mt) genomes are species specifc due to the vast of foreign DNA migration and frequent recombination of repeated sequences. Sequencing of the mt genome of kenaf (Hibiscus cannabinus) is essential for elucidating its evolutionary characteristics. In the present study, single- molecule real-time sequencing technology (SMRT) was used to sequence the complete mt genome of kenaf. Results showed that the complete kenaf mt genome was 569,915 bp long and consisted of 62 genes, including 36 protein-coding, 3 rRNA and 23 tRNA genes. Twenty-fve introns were found among nine of the 36 protein-coding genes, and fve introns were trans-spliced. A comparative analysis with other plant mt genomes showed that four syntenic gene clusters were conserved in all plant mtDNAs. Fifteen chloroplast-derived fragments were strongly associated with mt genes, including the intact sequences of the chloroplast genes psaA, ndhB and rps7. According to the plant mt genome evolution analysis, some ribosomal protein genes and succinate dehydrogenase genes were frequently lost during the evolution of angiosperms. Our data suggest that the kenaf mt genome retained evolutionarily conserved characteristics. Overall, the complete sequencing of the kenaf mt genome provides additional information and enhances our better understanding of mt genomic evolution across angiosperms. -
Characterization of Some Common Members of the Family Malvaceae S.S
Indian Journal of Plant Sciences ISSN: 2319–3824(Online) An Open Access, Online International Journal Available at http://www.cibtech.org/jps.htm 2014 Vol. 3 (3) July-September, pp.79-86/Naskar and Mandal Research Article CHARACTERIZATION OF SOME COMMON MEMBERS OF THE FAMILY MALVACEAE S.S. ON THE BASIS OF MORPHOLOGY OF SELECTIVE ATTRIBUTES: EPICALYX, STAMINAL TUBE, STIGMATIC HEAD AND TRICHOME *Saikat Naskar and Rabindranath Mandal Department of Botany, Barasat Govt. College, Barasat, Kolkata- 700124, West Bengal, India *Author for Correspondence: [email protected] ABSTRACT Epicalyx, staminal tube, stigma and trichome morphological characters have been used to characterize some common members of Malvaceae s.s. These characters have been analyzed following a recent molecular phylogenetic classification of Malvaceae s.s. Stigmatic character is effective for segregation of the tribe Gossypieae from other tribes. But precise distinction of other two studied tribes, viz. Hibisceae and Malveae on the basis of this character proved to be insufficient. Absence of epicalyx in Malachra has indicated an independent evolutionary event within Hibisceae. Distinct H-shaped trichome of Malvastrum has pointed out its isolated position within Malveae. Staminal tube morphological similarities of Abutilon and Sida have suggested their closeness. A key to the genera has been provided for identification purpose. Keywords: Malvaceae s.s., Epicalyx, Staminal Tube, Stigma, Trichome INTRODUCTION Epicalyx and monadelphous stamens are considered as key characters of the family Malvaceae s.s. Epicalyx was recognized as an important character for taxonomic value by several authors (Fryxell, 1988; Esteves, 2000) since its presence or absence was employed to determine phylogenetic interpretation within the tribes of Malvaceae s.s. -
Polyploidy and the Evolutionary History of Cotton
POLYPLOIDY AND THE EVOLUTIONARY HISTORY OF COTTON Jonathan F. Wendel1 and Richard C. Cronn2 1Department of Botany, Iowa State University, Ames, Iowa 50011, USA 2Pacific Northwest Research Station, USDA Forest Service, 3200 SW Jefferson Way, Corvallis, Oregon 97331, USA I. Introduction II. Taxonomic, Cytogenetic, and Phylogenetic Framework A. Origin and Diversification of the Gossypieae, the Cotton Tribe B. Emergence and Diversification of the Genus Gossypium C. Chromosomal Evolution and the Origin of the Polyploids D. Phylogenetic Relationships and the Temporal Scale of Divergence III. Speciation Mechanisms A. A Fondness for Trans-oceanic Voyages B. A Propensity for Interspecific Gene Exchange IV. Origin of the Allopolyploids A. Time of Formation B. Parentage of the Allopolyploids V. Polyploid Evolution A. Repeated Cycles of Genome Duplication B. Chromosomal Stabilization C. Increased Recombination in Polyploid Gossypium D. A Diverse Array of Genic and Genomic Interactions E. Differential Evolution of Cohabiting Genomes VI. Ecological Consequences of Polyploidization VII. Polyploidy and Fiber VIII. Concluding Remarks References The cotton genus (Gossypium ) includes approximately 50 species distributed in arid to semi-arid regions of the tropic and subtropics. Included are four species that have independently been domesticated for their fiber, two each in Africa–Asia and the Americas. Gossypium species exhibit extraordinary morphological variation, ranging from herbaceous perennials to small trees with a diverse array of reproductive and vegetative -
Invasive Aphids Attack Native Hawaiian Plants
Biol Invasions DOI 10.1007/s10530-006-9045-1 INVASION NOTE Invasive aphids attack native Hawaiian plants Russell H. Messing Æ Michelle N. Tremblay Æ Edward B. Mondor Æ Robert G. Foottit Æ Keith S. Pike Received: 17 July 2006 / Accepted: 25 July 2006 Ó Springer Science+Business Media B.V. 2006 Abstract Invasive species have had devastating plants. To date, aphids have been observed impacts on the fauna and flora of the Hawaiian feeding and reproducing on 64 native Hawaiian Islands. While the negative effects of some inva- plants (16 indigenous species and 48 endemic sive species are obvious, other species are less species) in 32 families. As the majority of these visible, though no less important. Aphids (Ho- plants are endangered, invasive aphids may have moptera: Aphididae) are not native to Hawai’i profound impacts on the island flora. To help but have thoroughly invaded the Island chain, protect unique island ecosystems, we propose that largely as a result of anthropogenic influences. As border vigilance be enhanced to prevent the aphids cause both direct plant feeding damage incursion of new aphids, and that biological con- and transmit numerous pathogenic viruses, it is trol efforts be renewed to mitigate the impact of important to document aphid distributions and existing species. ranges throughout the archipelago. On the basis of an extensive survey of aphid diversity on the Keywords Aphid Æ Aphididae Æ Hawai’i Æ five largest Hawaiian Islands (Hawai’i, Kaua’i, Indigenous plants Æ Invasive species Æ Endemic O’ahu, Maui, and Moloka’i), we provide the first plants Æ Hawaiian Islands Æ Virus evidence that invasive aphids feed not just on agricultural crops, but also on native Hawaiian Introduction R. -
Genetic Variability Studies in Gossypium Barbadense L
Electronic Journal of Plant Breeding, 1(4): 961-965 (July 2010) Research Article Genetic variability studies in Gossypium barbadense L. genotypes for seed cotton yield and its yield components K. P. M. Dhamayanathi , S. Manickam and K. Rathinavel Abstract A study was carried out during kharif 2006-07 with twenty five Gossypium barbadense L genotypes to obtain information on genetic variability, heritability and genetic advance for seed cotton yield and its yield attributes. Significant differences were observed for characters among genotypes. High genetic differences were recorded for nodes/plant, sympodia, bolls as well as fruiting points per plant, seed cotton yield, lint index indicating ample scope for genetic improvement of these characters through selection. Results also revealed high heritability coupled with high genetic advance for yield and most of the yield components as well as fibre quality traits. Sympodia/plant, fruiting point /plant, number of nodes/plant, number of bolls per plant, and lint index were positively correlated with seed cotton yield per plant and appeared to be interrelated with each other. It is suggested that these characters could be considered as selection criteria in improving the seed cotton yield of G. barbadense , L genotypes. Key words : Gossypium barbadense , genetic variability, heritability, genetic advance, lint index, selection criteria Introduction Seed cotton yield is a complex trait governed by Cotton is the most widely used vegetable fibre and several yield contributing characters such as plant also the most important raw material for the textile height, number of monopodia, number of industry, grown in tropical and subtropical regions sympodia, number of bolls, number of fruiting in more than 80 countries all over the world. -
Long-Reads Reveal That the Chloroplast Genome Exists in Two Distinct Versions in Most Plants
GBE Long-Reads Reveal That the Chloroplast Genome Exists in Two Distinct Versions in Most Plants Weiwen Wang* and Robert Lanfear* Division of Ecology and Evolution, Research School of Biology, Australian National University, Acton, Australian Capital Territory, Australia *Corresponding authors: E-mails: [email protected]; [email protected]. Accepted: November 15, 2019 Downloaded from https://academic.oup.com/gbe/article/11/12/3372/5637229 by guest on 02 October 2021 Data deposition: The Herrania umbratica and Siraitia grosvenorii chloroplast genomes in this project have been deposited at NCBI under the accession MN163033 and MK279915. Abstract The chloroplast genome usually has a quadripartite structure consisting of a large single copy region and a small single copy region separated by two long inverted repeats. It has been known for some time that a single cell may contain at least two structural haplotypes of this structure, which differ in the relative orientation of the single copy regions. However, the methods required to detect and measure the abundance of the structural haplotypes are labor-intensive, and this phenomenon remains understudied. Here, we develop a new method, Cp-hap, to detect all possible structural haplotypes of chloroplast genomes of quadripartite structure using long-read sequencing data. We use this method to conduct a systematic analysis and quantification of chloroplast structural haplotypes in 61 land plant species across 19 orders of Angiosperms, Gymnosperms, and Pteridophytes. Our results show that there are two chloroplast structural haplotypes which occur with equal frequency in most land plant individuals. Nevertheless, species whose chloroplast genomes lack inverted repeats or have short inverted repeats have just a single structural haplotype. -
Cotton Leaf Curl Disease – an Emerging Threat to Cotton Production Worldwide
Journal of General Virology (2013), 94, 695–710 DOI 10.1099/vir.0.049627-0 Review Cotton leaf curl disease – an emerging threat to cotton production worldwide M. Naeem Sattar,1 Anders Kvarnheden,1 Muhammad Saeed2 and Rob W. Briddon2 Correspondence 1Department of Plant Biology and Forest Genetics, Uppsala BioCenter, Swedish University of Anders Kvarnheden Agricultural Sciences and Linnean Center for Plant Biology, Box 7080, SE-750 07 Uppsala, [email protected] Sweden 2National Institute for Biotechnology and Genetic Engineering, PO Box 577, Jhang Road, Faisalabad, Pakistan Cotton leaf curl disease (CLCuD) is a serious disease of cotton which has characteristic symptoms, the most unusual of which is the formation of leaf-like enations on the undersides of leaves. The disease is caused by whitefly-transmitted geminiviruses (family Geminiviridae, genus Begomovirus) in association with specific, symptom-modulating satellites (betasatellites) and an evolutionarily distinct group of satellite-like molecules known as alphasatellites. CLCuD occurs across Africa as well as in Pakistan and north-western India. Over the past 25 years, Pakistan and India have experienced two epidemics of the disease, the most recent of which involved a virus and satellite that are resistance breaking. Loss of this conventional host–plant resistance, which saved the cotton growers from ruin in the late 1990s, leaves farmers with only relatively poor host plant tolerance to counter the extensive losses the disease causes. There has always been the fear that CLCuD could spread from the relatively limited geographical range it encompasses at present to other cotton-growing areas of the world where, although the disease is not present, the environmental conditions are suitable for its establishment and the whitefly vector occurs. -
CHEMISTRY and HISTOLOGY of the GLANDS of the COTTON PLANT, with NOTES on the OCCURRENCE of SIMILAR GLANDS in RELATED Plantsl
CHEMISTRY AND HISTOLOGY OF THE GLANDS OF THE COTTON PLANT, WITH NOTES ON THE OCCURRENCE OF SIMILAR GLANDS IN RELATED PLANTSl By ERNEST E. STANFORD, Scientific Assistant, and ARNO VIEHOEVER, Pharmacog- nosist in Charge, Pharmacognosy Laboratory, Bureau of Chemistry, United States Department of Agriculture INTRODUCTION The work herein reported forms a portion of a chemical and biological investigation of the cotton plant (Gossypium spp.), the purpose of which is to isolate and determine the substance or substances which attract the boll weevil. A previous paper (77)2 discusses the isolation of certain glucosids and the products of their hydrolysis, as well as preliminary studies of an ethereal oil which manifested some attraction for the boll weevil. Both the glucosids and this oil, as well as several other sub- stances, are largely localized in prominent internal glands which are very numerous in nearly all parts of the cotton plant. The main purpose of this paper is to discuss the occurrence, formation, structure, and con- tents of these glands. Glands of another type, more properly referred to as "nectaries/' also occur in the cotton plant. These are superficial in position and definitely localized. The internal glands have nothing in common with these nectaries save the function of secretion. In certain taxonomic and other literature, however, either or both types are referred to indis- criminately simply as "glands." Therefore, it seems advisable also to discuss briefly in this paper the nature and occurrence of the nectaries, in order to distinguish them clearly from the internal secretory organs, which form the main subject of the present study. -
Assessment of Gene Flow Between Gossypium Hirsutum and G
G3: Genes|Genomes|Genetics Early Online, published on May 25, 2017 as doi:10.1534/g3.117.041509 Assessment of gene flow between Gossypium hirsutum and G. herbaceum: evidence of unreduced gametes in the diploid progenitor. Montes E *1, Coriton O †, Eber F †, Huteau V †, Lacape JM ‡, Reinhardt C §2, Marais D §, Hofs JL **, Chèvre AM † 2, Pannetier C * ‡ 2 *: Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Université Paris-Saclay, RD10, F-78026 Versailles Cedex, France †: Institut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université de Rennes I., BP35327, 35653 Le Rheu, France ‡: CIRAD, UMR AGAP, Amélioration Génétique et Adaptation des Plantes méditerranéennes et tropicales, 34398 Montpellier, France. §: Department of Plant and Soil Sciences, University of Pretoria, Pretoria 0001, South Africa ** : CIRAD, UR AIDA, Agro-écologie et Intensification Durable des cultures Annuelles, 34398 Montpellier, France. 1 present address: UMR 1349, IGEPP, INRA BP35327, 35653 Le Rheu, France 2 corresponding authors Running title Unreduced gametes in diploid cotton 1 © The Author(s) 2013. Published by the Genetics Society of America. Key words Gene flow, natural hybridization, unreduced gamete, Gossypium hirsutum, Gossypium herbaceum Corresponding authors: UMR 1349, Institut de Génétique, Environnement et Protection des Plantes, Institut National de la Recherche Agronomique (INRA), BP35327, F-35653 Le Rheu, France. Email [email protected] and UMR1318, Institut Jean-Pierre Bourgin, INRA F-78026 Versailles, France. Email [email protected]. 2 Abstract In the framework of a gene flow assessment, we investigated the natural hybridization rate between Gossypium hirsutum (AADD genome) and G. herbaceum (AA genome). The latter species, a diploid progenitor of G.