An Investigation Into the Parasitic Barnacle, Anelasma Squalicola; Prevalence, Infection Behaviour and Effects on Its Host, Etmopterus Spinax, in Lusterfjord, Norway
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Bibliography Database of Living/Fossil Sharks, Rays and Chimaeras (Chondrichthyes: Elasmobranchii, Holocephali) Papers of the Year 2016
www.shark-references.com Version 13.01.2017 Bibliography database of living/fossil sharks, rays and chimaeras (Chondrichthyes: Elasmobranchii, Holocephali) Papers of the year 2016 published by Jürgen Pollerspöck, Benediktinerring 34, 94569 Stephansposching, Germany and Nicolas Straube, Munich, Germany ISSN: 2195-6499 copyright by the authors 1 please inform us about missing papers: [email protected] www.shark-references.com Version 13.01.2017 Abstract: This paper contains a collection of 803 citations (no conference abstracts) on topics related to extant and extinct Chondrichthyes (sharks, rays, and chimaeras) as well as a list of Chondrichthyan species and hosted parasites newly described in 2016. The list is the result of regular queries in numerous journals, books and online publications. It provides a complete list of publication citations as well as a database report containing rearranged subsets of the list sorted by the keyword statistics, extant and extinct genera and species descriptions from the years 2000 to 2016, list of descriptions of extinct and extant species from 2016, parasitology, reproduction, distribution, diet, conservation, and taxonomy. The paper is intended to be consulted for information. In addition, we provide information on the geographic and depth distribution of newly described species, i.e. the type specimens from the year 1990- 2016 in a hot spot analysis. Please note that the content of this paper has been compiled to the best of our abilities based on current knowledge and practice, however, -
Zootaxa, Pollicipes Caboverdensis Sp. Nov. (Crustacea: Cirripedia
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Portal do Conhecimento Zootaxa 2557: 29–38 (2010) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2010 · Magnolia Press ISSN 1175-5334 (online edition) Pollicipes caboverdensis sp. nov. (Crustacea: Cirripedia: Scalpelliformes), an intertidal barnacle from the Cape Verde Islands JOANA N. FERNANDES1, 2, 3, TERESA CRUZ1, 2 & ROBERT VAN SYOC4 1Laboratório de Ciências do Mar, Universidade de Évora, Apartado 190, 7520-903 Sines, Portugal 2Centro de Oceanografia, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal 3Section of Evolution and Ecology, University of California, Davis, CA 95616, USA 4Department of Invertebrate Zoology and Geology, California Academy of Sciences, 55 Music Concourse Dr, San Francisco, CA 94118-4599, USA Abstract Recently, genetic evidence supported the existence of a new species of the genus Pollicipes from the Cape Verde Islands, previously considered a population of P. pollicipes. However, P. pollicipes was not sampled at its southern limit of distribution (Dakar, Senegal), which is geographically separated from the Cape Verde Islands by about 500 km. Herein we describe Pollicipes caboverdensis sp. nov. from the Cape Verde Islands and compare its morphology with the other three species of Pollicipes: P. pollicipes, P. elegans and P. po l y me ru s . Pollicipes pollicipes was sampled at both the middle (Portugal) and southern limit (Dakar, Senegal) of its geographical distribution. The genetic divergence among and within these two regions and Cape Verde was calculated through the analysis of partial mtDNA CO1 gene sequences. -
Stalked Barnacles
*Manuscript Click here to view linked References Stalked barnacles (Cirripedia, Thoracica) from the Upper Jurassic (Tithonian) Kimmeridge Clay of Dorset, UK; palaeoecology and bearing on the evolution of living forms Andy Gale School of Earth and Environmental Sciences, University of Portsmouth, Burnaby Building, Burnaby Road, Portsmouth PO1 3QL; E-mail address: [email protected] A B S T R A C T New thoracican cirripede material from the Kimmeridge Clay (Upper Jurassic, Tithonian) is described. This includes a log, encrusted on the lower surface with hundreds of perfectly preserved, articulated specimens of Etcheslepas durotrigensis Gale, 2014, and fewer specimens of Concinnalepas costata (Withers, 1928). Some individuals are preserved in life position, hanging from the underside of the wood, and the material provides new morphological information on both species. It appears that Martillepas ovalis (Withers, 1928), which occurs at the same level (Freshwater Steps Stone Band, pectinatus Zone) attached preferentially to ammonites, whereas E. durotrigensis and C. costata used wood as a substrate for their epiplanktonic lifestyle. Two regurgitates containing abundant barnacle valves, mostly broken, and some bivalve fragments, have been found in the Kimmeridge Clay. These were produced by a fish grazing on epiplanktonic species, and are only the second example of regurgitates containing barnacle valves known from the fossil record. The evolution of modern barnacle groups is discussed in the light of the new Jurassic material as well as recently published molecular phylogenies. New clades defined herein are called the Phosphatothoracica, the Calamida and the Unilatera. Keywords Epiplanktonic barnacles Kimmeridge Clay predation 1. INTRODUCTION Amongst the most remarkable fossils collected by Steve Etches from the Kimmeridge Clay of Dorset are articulated stalked barnacles. -
DEEPFISHMAN Document 5 : Review of Parasites, Pathogens
DEEPFISHMAN Management And Monitoring Of Deep-sea Fisheries And Stocks Project number: 227390 Small or medium scale focused research action Topic: FP7-KBBE-2008-1-4-02 (Deepsea fisheries management) DEEPFISHMAN Document 5 Title: Review of parasites, pathogens and contaminants of deep sea fish with a focus on their role in population health and structure Due date: none Actual submission date: 10 June 2010 Start date of the project: April 1st, 2009 Duration : 36 months Organization Name of lead coordinator: Ifremer Dissemination Level: PU (Public) Date: 10 June 2010 Review of parasites, pathogens and contaminants of deep sea fish with a focus on their role in population health and structure. Matt Longshaw & Stephen Feist Cefas Weymouth Laboratory Barrack Road, The Nothe, Weymouth, Dorset DT4 8UB 1. Introduction This review provides a summary of the parasites, pathogens and contaminant related impacts on deep sea fish normally found at depths greater than about 200m There is a clear focus on worldwide commercial species but has an emphasis on records and reports from the north east Atlantic. In particular, the focus of species following discussion were as follows: deep-water squalid sharks (e.g. Centrophorus squamosus and Centroscymnus coelolepis), black scabbardfish (Aphanopus carbo) (except in ICES area IX – fielded by Portuguese), roundnose grenadier (Coryphaenoides rupestris), orange roughy (Hoplostethus atlanticus), blue ling (Molva dypterygia), torsk (Brosme brosme), greater silver smelt (Argentina silus), Greenland halibut (Reinhardtius hippoglossoides), deep-sea redfish (Sebastes mentella), alfonsino (Beryx spp.), red blackspot seabream (Pagellus bogaraveo). However, it should be noted that in some cases no disease or contaminant data exists for these species. -
Unprecedented Genomic Diversity of RNA Viruses In
RESEARCH ARTICLE elifesciences.org Unprecedented genomic diversity of RNA viruses in arthropods reveals the ancestry of negative-sense RNA viruses Ci-Xiu Li1,2†, Mang Shi1,2,3†, Jun-Hua Tian4†, Xian-Dan Lin5†, Yan-Jun Kang1,2†, Liang-Jun Chen1,2, Xin-Cheng Qin1,2, Jianguo Xu1,2, Edward C Holmes1,3, Yong-Zhen Zhang1,2* 1State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China; 2Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Hangzhou, China; 3Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Biological Sciences and Sydney Medical School, The University of Sydney, Sydney, Australia; 4Wuhan Center for Disease Control and Prevention, Wuhan, China; 5Wenzhou Center for Disease Control and Prevention, Wenzhou, China Abstract Although arthropods are important viral vectors, the biodiversity of arthropod viruses, as well as the role that arthropods have played in viral origins and evolution, is unclear. Through RNA sequencing of 70 arthropod species we discovered 112 novel viruses that appear to be ancestral to much of the documented genetic diversity of negative-sense RNA viruses, a number of which are also present as endogenous genomic copies. With this greatly enriched diversity we revealed that arthropods contain viruses that fall basal to major virus groups, including the vertebrate-specific *For correspondence: arenaviruses, filoviruses, hantaviruses, influenza viruses, lyssaviruses, and paramyxoviruses. We [email protected] similarly documented a remarkable diversity of genome structures in arthropod viruses, including †These authors contributed a putative circular form, that sheds new light on the evolution of genome organization. -
Fossil Calibrations for the Arthropod Tree of Life
bioRxiv preprint doi: https://doi.org/10.1101/044859; this version posted June 10, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. FOSSIL CALIBRATIONS FOR THE ARTHROPOD TREE OF LIFE AUTHORS Joanna M. Wolfe1*, Allison C. Daley2,3, David A. Legg3, Gregory D. Edgecombe4 1 Department of Earth, Atmospheric & Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA 2 Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK 3 Oxford University Museum of Natural History, Parks Road, Oxford OX1 3PZ, UK 4 Department of Earth Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, UK *Corresponding author: [email protected] ABSTRACT Fossil age data and molecular sequences are increasingly combined to establish a timescale for the Tree of Life. Arthropods, as the most species-rich and morphologically disparate animal phylum, have received substantial attention, particularly with regard to questions such as the timing of habitat shifts (e.g. terrestrialisation), genome evolution (e.g. gene family duplication and functional evolution), origins of novel characters and behaviours (e.g. wings and flight, venom, silk), biogeography, rate of diversification (e.g. Cambrian explosion, insect coevolution with angiosperms, evolution of crab body plans), and the evolution of arthropod microbiomes. We present herein a series of rigorously vetted calibration fossils for arthropod evolutionary history, taking into account recently published guidelines for best practice in fossil calibration. -
The Crustacean-Inspired Pokémon
Journal of Geek Studies jgeekstudies.org Pokécrustacea: the crustacean-inspired Pokémon Rafael M. Rosa, Daniel C. Cavallari & Ana L. Vera-Silva Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo. Ri- beirão Preto, SP, Brazil. E-mail: [email protected]; [email protected]; [email protected] Crustaceans are a large and incredi- spectable few meters of leg span (e.g., the bly diverse group of very familiar animals Japanese spider crab can reach a whopping such as crabs, lobsters, shrimps, woodlice, 3.8 m or 12.5 ft). They are quite an ancient barnacles, and their allies. As full-fledged group, ranging back to the Cambrian pe- arthropods (invertebrate animals with an riod some 511 million years ago. Some ex- exoskeleton, a segmented body, and paired isting animals are virtually identical to fos- jointed appendages), they comprise over silized forms from the Triassic, dating back 70,000 species (Brusca et al., 2016) ranging 200 million years ago. in size from a fraction of a millimeter to re- Left: Decapods, from German zoologist Ernst Haeckel’s 1904 work “Kunstformen der Natur”. Right: Pokémon inspired by real-world decapods. 97 Rosa et al. Despite being classically identified as a group of their own, recent studies have shown that Crustacea is actually a para- phyletic taxon (that is, a group of animals that doesn’t include all descendants of their common ancestor) and that some crusta- ceans are more closely related to Hexapoda (insects and their allies) than to other crus- taceans (Regier et al., 2010; Lozano-Fernan- dez et al., 2019). -
Aquaculture of Stalked Barnacles (Pollicipes Pollicipes)
Aquaculture of stalked barnacles (Pollicipes pollicipes) Sofia Cota Franco A thesis submitted to Newcastle University in candidature for the Degree of Doctor of Philosophy School of Marine Science and Technology July 2014 Abstract The stalked barnacle, Pollicipes pollicipes, is considered a delicacy on the Iberian Peninsula and has a high market value. Despite being a dangerous activity, increased collection efforts and associated stock shortage have raised awareness of the need for effective conservation and stock management policies. Accordingly, aquaculture has received interest as an alternative to supply the market and for re-stocking programmes. However, knowledge on the aquaculture requirement of this species and applicable production cycles is limited. Research challenges span the entire P. pollicipes life cycle, from adult reproduction to larval settlement. Though adults have been kept in culture, the conditions required for broodstock reproduction and larval release remain poorly studied and larvae have been routinely extracted from wild-collected adults and reared to cyprids. Optimization of larval culture is essential for the production of high-quality larvae and avoidance of high mortality. Furthermore, cyprid settlement on artificial substrata presents a bottleneck to production, with settlement occurring mostly on conspecific adults. The conditions that mediate settlement on preferential substrata have yet to be established. Though juvenile behaviour and growth in the wild have been the subject of ecological studies, research on culture conditions is limited and the influence of environmental factors is poorly understood. In the present work, the effect of environmental conditions on the behaviour and development of P. pollicipes was tested throughout the life cycle to identify optimal culture conditions and assess potential for larger-scale culture. -
A Taxonomic Catalogue of Japanese Nemerteans (Phylum Nemertea)
Title A Taxonomic Catalogue of Japanese Nemerteans (Phylum Nemertea) Author(s) Kajihara, Hiroshi Zoological Science, 24(4), 287-326 Citation https://doi.org/10.2108/zsj.24.287 Issue Date 2007-04 Doc URL http://hdl.handle.net/2115/39621 Rights (c) Zoological Society of Japan / 本文献の公開は著者の意思に基づくものである Type article Note REVIEW File Information zsj24p287.pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP ZOOLOGICAL SCIENCE 24: 287–326 (2007) © 2007 Zoological Society of Japan [REVIEW] A Taxonomic Catalogue of Japanese Nemerteans (Phylum Nemertea) Hiroshi Kajihara* Department of Natural History Sciences, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan A literature-based taxonomic catalogue of the nemertean species (Phylum Nemertea) reported from Japanese waters is provided, listing 19 families, 45 genera, and 120 species as valid. Applications of the following species names to forms previously recorded from Japanese waters are regarded as uncertain: Amphiporus cervicalis, Amphiporus depressus, Amphiporus lactifloreus, Cephalothrix filiformis, Cephalothrix linearis, Cerebratulus fuscus, Lineus vegetus, Lineus bilineatus, Lineus gesserensis, Lineus grubei, Lineus longifissus, Lineus mcintoshii, Nipponnemertes pulchra, Oerstedia venusta, Prostoma graecense, and Prostoma grande. The identities of the taxa referred to by the fol- lowing four nominal species require clarification through future investigations: Cosmocephala japonica, Dicelis rubra, Dichilus obscurus, and Nareda serpentina. The nominal species established from Japanese waters are tabulated. In addition, a brief history of taxonomic research on Japanese nemerteans is reviewed. Key words: checklist, Pacific, classification, ribbon worm, Nemertinea 2001). The only recent listing of previously described Japa- INTRODUCTION nese species is the checklist of Crandall et al. (2002), but The phylum Nemertea comprises about 1,200 species the relevant literature is scattered. -
Testing Adaptive Hypotheses on the Evolution of Larval Life History in Acorn and Stalked Barnacles
Received: 10 May 2019 | Revised: 10 August 2019 | Accepted: 19 August 2019 DOI: 10.1002/ece3.5645 ORIGINAL RESEARCH Testing adaptive hypotheses on the evolution of larval life history in acorn and stalked barnacles Christine Ewers‐Saucedo1 | Paula Pappalardo2 1Department of Genetics, University of Georgia, Athens, GA, USA Abstract 2Odum School of Ecology, University of Despite strong selective pressure to optimize larval life history in marine environ‐ Georgia, Athens, GA, USA ments, there is a wide diversity with regard to developmental mode, size, and time Correspondence larvae spend in the plankton. In the present study, we assessed if adaptive hypoth‐ Christine Ewers‐Saucedo, Zoological eses explain the distribution of the larval life history of thoracican barnacles within a Museum of the Christian‐Albrechts University Kiel, Hegewischstrasse 3, 24105 strict phylogenetic framework. We collected environmental and larval trait data for Kiel, Germany. 170 species from the literature, and utilized a complete thoracican synthesis tree to Email: ewers‐[email protected]‐kiel. de account for phylogenetic nonindependence. In accordance with Thorson's rule, the fraction of species with planktonic‐feeding larvae declined with water depth and in‐ creased with water temperature, while the fraction of brooding species exhibited the reverse pattern. Species with planktonic‐nonfeeding larvae were overall rare, follow‐ ing no apparent trend. In agreement with the “size advantage” hypothesis proposed by Strathmann in 1977, egg and larval size were closely correlated. Settlement‐com‐ petent cypris larvae were larger in cold water, indicative of advantages for large ju‐ veniles when growth is slowed. Planktonic larval duration, on the other hand, was uncorrelated to environmental variables. -
Report of the Workshop on Deep-Sea Species Identification, Rome, 2–4 December 2009
FAO Fisheries and Aquaculture Report No. 947 FIRF/R947 (En) ISSN 2070-6987 Report of the WORKSHOP ON DEEP-SEA SPECIES IDENTIFICATION Rome, Italy, 2–4 December 2009 Cover photo: An aggregation of the hexactinellid sponge Poliopogon amadou at the Great Meteor seamount, Northeast Atlantic. Courtesy of the Task Group for Maritime Affairs, Estrutura de Missão para os Assuntos do Mar – Portugal. Copies of FAO publications can be requested from: Sales and Marketing Group Office of Knowledge Exchange, Research and Extension Food and Agriculture Organization of the United Nations E-mail: [email protected] Fax: +39 06 57053360 Web site: www.fao.org/icatalog/inter-e.htm FAO Fisheries and Aquaculture Report No. 947 FIRF/R947 (En) Report of the WORKSHOP ON DEEP-SEA SPECIES IDENTIFICATION Rome, Italy, 2–4 December 2009 FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Rome, 2011 The designations employed and the presentation of material in this Information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal or development status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed or recommended by FAO in preference to others of a similar nature that are not mentioned. The views expressed in this information product are those of the author(s) and do not necessarily reflect the views of FAO. -
Comparability in Evolutionary Biology: the Case of Darwin's Barnacles
1 Invited contribution to a Special Issue on Comparability for Linguistic Typology Eds. Nicholas Evans & Maria Koptjevskaja Tamm Comparability in evolutionary biology: the case of Darwin’s barnacles Lindell Bromham Macroevolution and Macroecology Group Research School of Biology Australian National University Abstract: Language change and biological evolution are sufficiently similar that biologists and linguists often face similar challenges in reconstructing paths of historical change connecting different species or languages. Tracing evolutionary change over time requires us to consider how shared features have been modified in different lineages since they shared a common ancestor, and this means we have to be able to establish meaningful comparability between traits. In some cases, we may wish to understand how the same ancestral trait has been modified in each lineage in response to different pressures. But in other cases, we may wish to ask whether particular traits often arise in response to certain circumstances. Biologists must therefore consider different reasons for similarities between species, and choose to compare those traits that are relevant to the story they want to tell. To reconstruct histories of change, we need to compare homologous traits (those similar due to shared ancestry). But comparing analogous traits (independently derived but similar traits) highlights how separate evolutionary lineages can find similar solutions to common problems. I will illustrate the importance of comparability in constructing evolutionary explanations using one of the more obscure yet fascinating examples of Charles Darwin’s scientific researches, his multi-volume taxonomic treatise on barnacles. Darwin faced the challenge of how to explain the evolutionary trajectory of unique and highly modified traits that appear to have no equivalents in related taxa.