CHARACTERIZATION of TWO COEXISTING PATHOGEN POPULATIONS of Leptosphaeria Spp., the CAUSE of STEM CANKER of BRASSICAS
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Identification of Leptosphaeria Biglobosa 'Canadensis' on Brassica
CSIRO PUBLISHING www.publish.csiro.au/journals/apdn Australasian Plant Disease Notes, 2008, 3, 124–128 Identification of Leptosphaeria biglobosa ‘canadensis’ on Brassica juncea stubble from northern New South Wales, Australia Angela P. Van de Wouw A,E, Vicki L. Thomas B, Anton J. Cozijnsen A, Stephen J. Marcroft C, Phillip A. Salisbury B,D and Barbara J. Howlett A ASchool of Botany, The University of Melbourne, Vic. 3010, Australia. BFaculty of Land and Food Resources, The University of Melbourne, Vic. 3010, Australia. CMarcroft Grains Pathology P/L, Grains Innovation Park, Horsham, Vic. 3400, Australia. DDepartment of Primary Industries, VABC, Bundoora, Vic. 3083, Australia. ECorresponding author. Email: [email protected] Abstract. Leptosphaeria biglobosa ‘canadensis’ is reported for the first time in Australia. All 88 Leptosphaeria isolates cultured from Brassica juncea stubble from northern NSW were L. biglobosa ‘canadensis’ whilst all 55 isolates cultured from Victorian stubble of the same B. juncea lines were L. maculans. Both L. biglobosa ‘canadensis’ and L. maculans formed similar sized lesions on B. juncea cotyledons after 14 days. However, L. biglobosa ‘canadensis’ isolates colonised stems less effectively than L. maculans and consequently caused less crown cankering. The two Dothideomycetes, Leptosphaeria maculans and B. juncea is more drought-tolerant and can be grown in regions L. biglobosa, comprise a species complex associated with with short, warm to hot growing seasons in which soil water disease of crucifers including Brassica napus (canola, oilseed supply is unreliable (Oram et al. 2005). In Canada, B. juncea has rape). Through the use of molecular techniques, L. biglobosa has been grown as a condiment mustard crop for 20 years, specifically been divided into six subclades, namely ‘canadensis’, in the hotter, drier areas of western Canada. -
Leptosphaeriaceae, Pleosporales) from Italy
Mycosphere 6 (5): 634–642 (2015) ISSN 2077 7019 www.mycosphere.org Article Mycosphere Copyright © 2015 Online Edition Doi 10.5943/mycosphere/6/5/13 Phylogenetic and morphological appraisal of Leptosphaeria italica sp. nov. (Leptosphaeriaceae, Pleosporales) from Italy Dayarathne MC1,2,3,4, Phookamsak R 1,2,3,4, Ariyawansa HA3,4,7, Jones E.B.G5, Camporesi E6 and Hyde KD1,2,3,4* 1World Agro forestry Centre East and Central Asia Office, 132 Lanhei Road, Kunming 650201, China. 2Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan China 3Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 4School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand 5Department of Botany and Microbiology, King Saudi University, Riyadh, Saudi Arabia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy; A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314, Brescia, Italy; Società per gli Studi Naturalistici della Romagna, C.P. 144, Bagnacavallo (RA), Italy 7Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang, 550006, Guizhou, China Dayarathne MC, Phookamsak R, Ariyawansa HA, Jones EBG, Camporesi E and Hyde KD 2015 – Phylogenetic and morphological appraisal of Leptosphaeria italica sp. nov. (Leptosphaeriaceae, Pleosporales) from Italy. Mycosphere 6(5), 634–642, Doi 10.5943/mycosphere/6/5/13 Abstract A fungal species with bitunicate asci and ellipsoid to fusiform ascospores was collected from a dead branch of Rhamnus alpinus in Italy. The new taxon morphologically resembles Leptosphaeria. -
Warm and Wet Autumns Favour Yield Losses of Oilseed Rape Caused by Phoma Stem Canker
agronomy Article Warm and Wet Autumns Favour Yield Losses of Oilseed Rape Caused by Phoma Stem Canker Andrzej Brachaczek 1 , Joanna Kaczmarek 2 and Malgorzata Jedryczka 2,* 1 Corteva Agriscience Poland Ltd., Józefa Piusa Dzieko´nskiego1, 00-728 Warsaw, Poland; [email protected] 2 Department of Pathogen Genetics and Plant Resistance, Institute of Plant Genetics, Polish Academy of Sciences, Strzeszynska 34, 60-479 Pozna´n,Poland; [email protected] * Correspondence: [email protected]; Tel.: +48-616-550-271 Abstract: Winter oilseed rape (Brassica napus L.) is the main source of domestic oil in central and northern Europe, bringing profits to farmers, but the plants are often damaged by stem canker, caused by two fungal species belonging to the genus Leptosphaeria. Due to environmental concerns, the benefits of fungicide applications must outweigh disadvantages. The aim of this work was to determine the effect of stem canker on seed yield and its quality and find out the best timing of fungicide application. The multi-year field experiments were done at two sites in south-west Poland, where the disease is regarded as a serious problem. The fungicide treatments with the azole-containing preparation followed the same scheme each year; a single application was made at one-week intervals, starting in late September through mid-November for a total of eight treatments. Seed yield, oil and protein content, mass of thousand seeds as well as indole-and alkenyl-glucosinolate contents in seeds were statistically unrelated with the incidence and severity of phoma leaf spotting and stem canker symptoms. The significant decrease of the seed yield was observed in three Citation: Brachaczek, A.; Kaczmarek, (site × year combinations) of eight, in which phoma leaf spotting and stem canker were severe. -
Insights Into Fighting Against Blackleg Disease of Brassica Napus in Canada
CSIRO PUBLISHING Crop & Pasture Science, 2018, 69,40–47 http://dx.doi.org/10.1071/CP16401 Insights into fighting against blackleg disease of Brassica napus in Canada Xuehua Zhang A and W. G. Dilantha Fernando A,B ADepartment of Plant Science, University of Manitoba, 66 Dafoe Road, Winnipeg, MB, R3T 2N2, Canada. BCorresponding author. Email: [email protected] Abstract. Blackleg disease, caused by the ascomycete fungal pathogen Leptosphaeria maculans, is a devastating disease of canola (Brassica napus) in Australia, Canada and Europe. Although cultural strategies such as crop rotation, fungicide application, and tillage are adopted to control the disease, the most promising disease control strategy is the utilisation of resistant canola varieties. However, field populations of L. maculans display a high evolutionary potential and are able to overcome major resistance genes within a few years, making disease control relying on resistant varieties challenging. In the early 1990s, blackleg resistance gene Rlm3 was introduced into Canadian canola varieties and provided good resistance against the fungal populations until the early 2000s, when moderate to severe blackleg outbreaks were observed in some areas across western Canada. However, the breakdown of Rlm3 resistance was not reported until recently, based on studies on R genes present in Canadian canola varieties and the avirulence allele frequency in L. maculans populations in western Canada. The fact that Rlm3 was overcome by the evolution of fungal populations demands canola breeding programs in Canada to be prepared to develop canola varieties with diversified and efficient R genes. In addition, frequent monitoring of fungal populations can provide up-to-date guidance for proper resistance genes deployment. -
Molecular Systematics of the Marine Dothideomycetes
available online at www.studiesinmycology.org StudieS in Mycology 64: 155–173. 2009. doi:10.3114/sim.2009.64.09 Molecular systematics of the marine Dothideomycetes S. Suetrong1, 2, C.L. Schoch3, J.W. Spatafora4, J. Kohlmeyer5, B. Volkmann-Kohlmeyer5, J. Sakayaroj2, S. Phongpaichit1, K. Tanaka6, K. Hirayama6 and E.B.G. Jones2* 1Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90112, Thailand; 2Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand; 3National Center for Biothechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.; 4Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, U.S.A.; 5Institute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, North Carolina 28557, U.S.A.; 6Faculty of Agriculture & Life Sciences, Hirosaki University, Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan *Correspondence: E.B. Gareth Jones, [email protected] Abstract: Phylogenetic analyses of four nuclear genes, namely the large and small subunits of the nuclear ribosomal RNA, transcription elongation factor 1-alpha and the second largest RNA polymerase II subunit, established that the ecological group of marine bitunicate ascomycetes has representatives in the orders Capnodiales, Hysteriales, Jahnulales, Mytilinidiales, Patellariales and Pleosporales. Most of the fungi sequenced were intertidal mangrove taxa and belong to members of 12 families in the Pleosporales: Aigialaceae, Didymellaceae, Leptosphaeriaceae, Lenthitheciaceae, Lophiostomataceae, Massarinaceae, Montagnulaceae, Morosphaeriaceae, Phaeosphaeriaceae, Pleosporaceae, Testudinaceae and Trematosphaeriaceae. Two new families are described: Aigialaceae and Morosphaeriaceae, and three new genera proposed: Halomassarina, Morosphaeria and Rimora. -
Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
Phenotypic Characterization of Leptosphaeria Maculans
PHENOTYPIC CHARACTERIZATION OF LEPTOSPHAERIA MACULANS PATHOGENICITY GROUPS AGGRESSIVENESS ON BRASSICA NAPUS A Thesis Submitted to the Graduate Faculty of the North Dakota State University of Agriculture and Applied Science By Julianna Franceschi Fernández In Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE Major Department: Plant Pathology March 2015 Fargo, North Dakota North Dakota State University Graduate School Title Phenotypic characterization of the aggressiveness of pathogenicity groups of Leptosphaeria maculans on Brassica napus By Julianna Franceschi Fernández The Supervisory Committee certifies that this disquisition complies with North Dakota State University’s regulations and meets the accepted standards for the degree of MASTER OF SCIENCE SUPERVISORY COMMITTEE: Dr. Luis del Rio Mendoza Chair Dr. Gary Secor Dr. Jared LeBoldus Dr. Juan Osorno Approved: 04/14/2015 Jack Rasmussen Date Department Chair ABSTRACT One of the most destructive pathogens of canola (Brassica napus L.) is Leptosphaeria maculans (Desm.) Ces. & De Not., which causes blackleg disease. This fungus produces strains with different virulence profiles (pathogenicity groups, PG) which are defined using differential cultivars Westar, Quinta and Glacier. Besides this, little is known about other traits that characterize these groups. The objective of this study was to characterize the aggressiveness of L. maculans PG 2, 3, 4, and T. The components of aggressiveness evaluated were disease severity and ability to grow and sporulate in artificial medium. Disease severity was measured at different temperatures on seedlings of cv. Westar inoculated with pycnidiospores of 65 isolates. Highly significant (α=0.05) interactions were detected between colony age and isolates nested within PG’s. -
A Leptosphaeria Biglobosa 'Canadensis' Isolate Induced Resistance in Brassica Juncea L
16th Australian Research Assembly on Brassicas. Ballarat Victoria 2009 A Leptosphaeria biglobosa 'canadensis' isolate induced resistance in Brassica juncea L. and Brassica napus L. against Leptosphaeria maculans (Desm.) Ces. et de Not. V. L. Thomas 1,5, R. M Norton 2, S.J Marcroft2 and P.A Salisbury 3, 4 1 Melbourne School of Land and Environment, The University of Melbourne, Private Bag 260, Horsham, Vic 3401, Australia 2 Marcroft Grains Pathology Pty Ltd, Grains Innovation Park, 110 Natimuk Rd, Horsham, Vic. 3400, Australia. 3 Melbourne School of Land and Environment, The University of Melbourne, Parkville, Vic 3010, Australia 4 Department of Primary Industries, Bundoora, Victoria 3086, Australia 5 Corresponding author: email: [email protected] ABSTRACT Blackleg disease severity of Brassica napus (canola) was reduced when canola plants were artificially inoculated with a non-aggressive Leptosphaeria biglobosa ‘canadensis’ isolate prior to inoculation with an aggressive L. maculans isolate. The reduction in blackleg severity by inoculating plants with a non-aggressive Leptosphaeria isolate consistently occurred for both B. napus and B. juncea cultivars. The only cultivars that were not protected were the susceptible control cvs. Karoo and Q2. Inoculation of plants with the L. biglobosa ‘canadensis’ isolate 48 hours after inoculation with the aggressive L. maculans isolate was less effective, with internal infection severity not significantly reduced compared to inoculation with just the L. maculans isolate alone. The use of L. biglobosa ‘canadensis’ as a biological control offers a potential management practice that could complement host resistance. Key Words: Systemic acquired resistance - SAR. INTRODUCTION Blackleg, the most important disease of Brassica napus L. -
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Hilton et al. Microbiome (2021) 9:19 https://doi.org/10.1186/s40168-020-00972-0 RESEARCH Open Access Identification of microbial signatures linked to oilseed rape yield decline at the landscape scale Sally Hilton1* , Emma Picot1, Susanne Schreiter2, David Bass3,4, Keith Norman5, Anna E. Oliver6, Jonathan D. Moore7, Tim H. Mauchline2, Peter R. Mills8, Graham R. Teakle1, Ian M. Clark2, Penny R. Hirsch2, Christopher J. van der Gast9 and Gary D. Bending1* Abstract Background: The plant microbiome plays a vital role in determining host health and productivity. However, we lack real-world comparative understanding of the factors which shape assembly of its diverse biota, and crucially relationships between microbiota composition and plant health. Here we investigated landscape scale rhizosphere microbial assembly processes in oilseed rape (OSR), the UK’s third most cultivated crop by area and the world's third largest source of vegetable oil, which suffers from yield decline associated with the frequency it is grown in rotations. By including 37 conventional farmers’ fields with varying OSR rotation frequencies, we present an innovative approach to identify microbial signatures characteristic of microbiomes which are beneficial and harmful to the host. Results: We show that OSR yield decline is linked to rotation frequency in real-world agricultural systems. We demonstrate fundamental differences in the environmental and agronomic drivers of protist, bacterial and fungal communities between root, rhizosphere soil and bulk soil compartments. We further discovered that the assembly of fungi, but neither bacteria nor protists, was influenced by OSR rotation frequency. However, there were individual abundant bacterial OTUs that correlated with either yield or rotation frequency. -
Cloning and Analysis of the Mating-Type Idiomorphs from the Barley Pathogen Septoria Passerinii
Mol Gen Genomics (2003) 269: 1–12 DOI 10.1007/s00438-002-0795-x ORIGINAL PAPER S. B. Goodwin Æ C. Waalwijk Æ G. H. J. Kema J. R. Cavaletto Æ G. Zhang Cloning and analysis of the mating-type idiomorphs from the barley pathogen Septoria passerinii Received: 15 April 2002 / Accepted: 5 December 2002 / Published online: 11 March 2003 Ó Springer-Verlag 2003 Abstract The genus Septoria contains more than 1000 amplified polymorphic DNA markers revealed that each species of plant pathogenic fungi, most of which have no isolate had a unique genotype. The common occurrence known sexual stage. Species of Septoria without a known of both mating types on the same leaf and the high levels sexual stage could be recent derivatives of sexual species of genotypic diversity indicate that S. passerinii is almost that have lost the ability to mate. To test this hypothesis, certainly not an asexual derivative of a sexual fungus. the mating-type region of S. passerinii, a species with no Instead, sexual reproduction probably plays an integral known sexual stage, was cloned, sequenced, and com- role in the life cycle of S. passerinii and may be much pared to that of its close relative S. tritici (sexual stage: more important than previously believed in this (and Mycosphaerella graminicola). Both of the S. passerinii possibly other) ‘‘asexual’’ species of Septoria. mating-type idiomorphs were approximately 3 kb in size and contained a single reading frame interrupted by one Keywords Cochliobolus Æ Evolution Æ (MAT-2)ortwo(MAT-1) putative introns. The putative Loculoascomycetes Æ Multiplex PCR Æ Mycosphaerella products of MAT-1 and MAT-2 are characterized by graminicola alpha-box and high-mobility-group sequences, respec- tively, similar to those in the mating-type genes of M. -
Developing a Blackleg Management Package for North
DEVELOPING A BLACKLEG MANAGEMENT PACKAGE FOR NORTH DAKOTA A Thesis Submitted to the Graduate Faculty of the North Dakota State University of Agriculture and Applied Science By Sudha G C Upadhaya In Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE Major Department: Plant Pathology April 2019 Fargo, North Dakota North Dakota State University Graduate School Title DEVELOPING A BLACKLEG MANAGEMENT PACKAGE FOR NORTH DAKOTA By Sudha G C Upadhaya The Supervisory Committee certifies that this disquisition complies with North Dakota State University’s regulations and meets the accepted standards for the degree of MASTER OF SCIENCE SUPERVISORY COMMITTEE: Dr. Luis del Río Mendoza Chair Dr. Venkat Chapara Dr. Md. Mukhlesur Rahman Approved: 4/26/2019 Dr. Jack Rasmussen Date Department Chair ABSTRACT Blackleg, caused by Leptosphaeria maculans, inflicts greatest canola yield losses when plants are infected before reaching the six-leaf growth stage. Studies were conducted to model pseudothecia maturation and ascospore dispersal to help growers make timely foliar fungicide applications. Pseudothecia maturation occurred mostly during the second half of June or in July in 2017 and 2018 in North Dakota and ascospores concentrations peaked during mid to late June in both years. A logistic regression model developed using temperature and relative humidity predicted the maturation of pseudothecia and ascospore dispersal with approximately 74% and 70% accuracy respectively. In addition, trials to evaluate the efficacy of five seed treatment fungicides were conducted under greenhouse and field conditions. All treatments reduced (P = 0.05) disease severity on seedlings in greenhouse trials, but not in field trials. Seed treatments, while a valuable tool, should not be used as the only means to manage blackleg. -
Reduction in the Use of Fungicides in Apple and Sour Cherry Production by Preventative Methods and Warning Systems
Reduction in the use of fungicides in apple and sour cherry production by preventative methods and warning systems Pesticides Research No. 139 2012 Title: Authors & contributors: Reduction in the use of fungicides in apple and 1Hanne Lindhard Pedersen, 2Birgit Jensen, 3Lisa Munk, 2,4Marianne Bengtsson and 5Marc Trapman sour cherry production by preventative methods and warning systems 1Department of Food Science, Aarhus University, Denmark. (AU- Aarslev) 2Department of Plant Biology and Biotechnology, Faculty of Life Sciences, University of Copenhagen, Denmark 3Department of Agriculture and Ecology, Faculty of Life Sciences, University of Copenhagen, Denmark 4present address: Patent & Science Information Research, Novo Nordisk A/S, Denmark 5BioFruit Advies, The Netherlands. 1 Institut for Fødevarer, Aarhus Universitet, (AU-Aarslev) 2 Institut for Plantebiologi og Bioteknologi, Det Biovidenskabelige Fakultet, Københavns Universitet 3 Institut for Jordbrug og Økologi, Det Biovidenskabelige Fakultet, Københavns Universitet. 4 Patent & Science Information Research, Novo Nordisk A/S, Danmark. 5 BioFruit Advies, Holland. Publisher: Miljøstyrelsen Strandgade 29 1401 København K www.mst.dk Year: 2012 ISBN no. 978-87-92779-70-0 Disclaimer: The Danish Environmental Protection Agency will, when opportunity offers, publish reports and contributions relating to environmental research and development projects financed via the Danish EPA. Please note that publication does not signify that the contents of the reports necessarily reflect the views of the Danish EPA. The reports are, however, published because the Danish EPA finds that the studies represent a valuable contribution to the debate on environmental policy in Denmark. May be quoted provided the source is acknowledged. 2 Reduction in the use of fungicides in apple and sour cherry production by preventative methods and warning systems Content PREFACE 5 SAMMENFATNING OG KONKLUSIONER 7 SUMMARY AND CONCLUSIONS 9 1.