Morphological Variation and Cultural Characteristics of <Emphasis Type="Italic">Coniothyrium Leucospermi </Em
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Leptosphaeriaceae, Pleosporales) from Italy
Mycosphere 6 (5): 634–642 (2015) ISSN 2077 7019 www.mycosphere.org Article Mycosphere Copyright © 2015 Online Edition Doi 10.5943/mycosphere/6/5/13 Phylogenetic and morphological appraisal of Leptosphaeria italica sp. nov. (Leptosphaeriaceae, Pleosporales) from Italy Dayarathne MC1,2,3,4, Phookamsak R 1,2,3,4, Ariyawansa HA3,4,7, Jones E.B.G5, Camporesi E6 and Hyde KD1,2,3,4* 1World Agro forestry Centre East and Central Asia Office, 132 Lanhei Road, Kunming 650201, China. 2Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan China 3Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 4School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand 5Department of Botany and Microbiology, King Saudi University, Riyadh, Saudi Arabia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy; A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314, Brescia, Italy; Società per gli Studi Naturalistici della Romagna, C.P. 144, Bagnacavallo (RA), Italy 7Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang, 550006, Guizhou, China Dayarathne MC, Phookamsak R, Ariyawansa HA, Jones EBG, Camporesi E and Hyde KD 2015 – Phylogenetic and morphological appraisal of Leptosphaeria italica sp. nov. (Leptosphaeriaceae, Pleosporales) from Italy. Mycosphere 6(5), 634–642, Doi 10.5943/mycosphere/6/5/13 Abstract A fungal species with bitunicate asci and ellipsoid to fusiform ascospores was collected from a dead branch of Rhamnus alpinus in Italy. The new taxon morphologically resembles Leptosphaeria. -
Phylogeny and Morphology of Premilcurensis Gen
Phytotaxa 236 (1): 040–052 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2015 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.236.1.3 Phylogeny and morphology of Premilcurensis gen. nov. (Pleosporales) from stems of Senecio in Italy SAOWALUCK TIBPROMMA1,2,3,4,5, ITTHAYAKORN PROMPUTTHA6, RUNGTIWA PHOOKAMSAK1,2,3,4, SARANYAPHAT BOONMEE2, ERIO CAMPORESI7, JUN-BO YANG1,2, ALI H. BHAKALI8, ERIC H. C. MCKENZIE9 & KEVIN D. HYDE1,2,4,5,8 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, People’s Republic of China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, P. R. China 5Mushroom Research Foundation, 128 M.3 Ban Pa Deng T. Pa Pae, A. Mae Taeng, Chiang Mai 50150, Thailand 6Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand 7A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy; A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314, Brescia, Italy; Società per gli Studi Naturalistici della Romagna, C.P. 144, Bagnacavallo (RA), Italy 8Botany and Microbiology Department, College of Science, King Saud University, Riyadh, KSA 11442, Saudi Arabia 9Manaaki Whenua Landcare Research, Private Bag 92170, Auckland, New Zealand *Corresponding author: Dr. Itthayakorn Promputtha, Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand. -
Molecular Systematics of the Marine Dothideomycetes
available online at www.studiesinmycology.org StudieS in Mycology 64: 155–173. 2009. doi:10.3114/sim.2009.64.09 Molecular systematics of the marine Dothideomycetes S. Suetrong1, 2, C.L. Schoch3, J.W. Spatafora4, J. Kohlmeyer5, B. Volkmann-Kohlmeyer5, J. Sakayaroj2, S. Phongpaichit1, K. Tanaka6, K. Hirayama6 and E.B.G. Jones2* 1Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90112, Thailand; 2Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand; 3National Center for Biothechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.; 4Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, U.S.A.; 5Institute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, North Carolina 28557, U.S.A.; 6Faculty of Agriculture & Life Sciences, Hirosaki University, Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan *Correspondence: E.B. Gareth Jones, [email protected] Abstract: Phylogenetic analyses of four nuclear genes, namely the large and small subunits of the nuclear ribosomal RNA, transcription elongation factor 1-alpha and the second largest RNA polymerase II subunit, established that the ecological group of marine bitunicate ascomycetes has representatives in the orders Capnodiales, Hysteriales, Jahnulales, Mytilinidiales, Patellariales and Pleosporales. Most of the fungi sequenced were intertidal mangrove taxa and belong to members of 12 families in the Pleosporales: Aigialaceae, Didymellaceae, Leptosphaeriaceae, Lenthitheciaceae, Lophiostomataceae, Massarinaceae, Montagnulaceae, Morosphaeriaceae, Phaeosphaeriaceae, Pleosporaceae, Testudinaceae and Trematosphaeriaceae. Two new families are described: Aigialaceae and Morosphaeriaceae, and three new genera proposed: Halomassarina, Morosphaeria and Rimora. -
Thermophilic Fungi: Taxonomy and Biogeography
Journal of Agricultural Technology Thermophilic Fungi: Taxonomy and Biogeography Raj Kumar Salar1* and K.R. Aneja2 1Department of Biotechnology, Chaudhary Devi Lal University, Sirsa – 125 055, India 2Department of Microbiology, Kurukshetra University, Kurukshetra – 136 119, India Salar, R. K. and Aneja, K.R. (2007) Thermophilic Fungi: Taxonomy and Biogeography. Journal of Agricultural Technology 3(1): 77-107. A critical reappraisal of taxonomic status of known thermophilic fungi indicating their natural occurrence and methods of isolation and culture was undertaken. Altogether forty-two species of thermophilic fungi viz., five belonging to Zygomycetes, twenty-three to Ascomycetes and fourteen to Deuteromycetes (Anamorphic Fungi) are described. The taxa delt with are those most commonly cited in the literature of fundamental and applied work. Latest legal valid names for all the taxa have been used. A key for the identification of thermophilic fungi is given. Data on geographical distribution and habitat for each isolate is also provided. The specimens deposited at IMI bear IMI number/s. The document is a sound footing for future work of indentification and nomenclatural interests. To solve residual problems related to nomenclatural status, further taxonomic work is however needed. Key Words: Biodiversity, ecology, identification key, taxonomic description, status, thermophile Introduction Thermophilic fungi are a small assemblage in eukaryota that have a unique mechanism of growing at elevated temperature extending up to 60 to 62°C. During the last four decades many species of thermophilic fungi sporulating at 45oC have been reported. The species included in this account are only those which are thermophilic in the sense of Cooney and Emerson (1964). -
Phenotypic Characterization of Leptosphaeria Maculans
PHENOTYPIC CHARACTERIZATION OF LEPTOSPHAERIA MACULANS PATHOGENICITY GROUPS AGGRESSIVENESS ON BRASSICA NAPUS A Thesis Submitted to the Graduate Faculty of the North Dakota State University of Agriculture and Applied Science By Julianna Franceschi Fernández In Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE Major Department: Plant Pathology March 2015 Fargo, North Dakota North Dakota State University Graduate School Title Phenotypic characterization of the aggressiveness of pathogenicity groups of Leptosphaeria maculans on Brassica napus By Julianna Franceschi Fernández The Supervisory Committee certifies that this disquisition complies with North Dakota State University’s regulations and meets the accepted standards for the degree of MASTER OF SCIENCE SUPERVISORY COMMITTEE: Dr. Luis del Rio Mendoza Chair Dr. Gary Secor Dr. Jared LeBoldus Dr. Juan Osorno Approved: 04/14/2015 Jack Rasmussen Date Department Chair ABSTRACT One of the most destructive pathogens of canola (Brassica napus L.) is Leptosphaeria maculans (Desm.) Ces. & De Not., which causes blackleg disease. This fungus produces strains with different virulence profiles (pathogenicity groups, PG) which are defined using differential cultivars Westar, Quinta and Glacier. Besides this, little is known about other traits that characterize these groups. The objective of this study was to characterize the aggressiveness of L. maculans PG 2, 3, 4, and T. The components of aggressiveness evaluated were disease severity and ability to grow and sporulate in artificial medium. Disease severity was measured at different temperatures on seedlings of cv. Westar inoculated with pycnidiospores of 65 isolates. Highly significant (α=0.05) interactions were detected between colony age and isolates nested within PG’s. -
Developing a Blackleg Management Package for North
DEVELOPING A BLACKLEG MANAGEMENT PACKAGE FOR NORTH DAKOTA A Thesis Submitted to the Graduate Faculty of the North Dakota State University of Agriculture and Applied Science By Sudha G C Upadhaya In Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE Major Department: Plant Pathology April 2019 Fargo, North Dakota North Dakota State University Graduate School Title DEVELOPING A BLACKLEG MANAGEMENT PACKAGE FOR NORTH DAKOTA By Sudha G C Upadhaya The Supervisory Committee certifies that this disquisition complies with North Dakota State University’s regulations and meets the accepted standards for the degree of MASTER OF SCIENCE SUPERVISORY COMMITTEE: Dr. Luis del Río Mendoza Chair Dr. Venkat Chapara Dr. Md. Mukhlesur Rahman Approved: 4/26/2019 Dr. Jack Rasmussen Date Department Chair ABSTRACT Blackleg, caused by Leptosphaeria maculans, inflicts greatest canola yield losses when plants are infected before reaching the six-leaf growth stage. Studies were conducted to model pseudothecia maturation and ascospore dispersal to help growers make timely foliar fungicide applications. Pseudothecia maturation occurred mostly during the second half of June or in July in 2017 and 2018 in North Dakota and ascospores concentrations peaked during mid to late June in both years. A logistic regression model developed using temperature and relative humidity predicted the maturation of pseudothecia and ascospore dispersal with approximately 74% and 70% accuracy respectively. In addition, trials to evaluate the efficacy of five seed treatment fungicides were conducted under greenhouse and field conditions. All treatments reduced (P = 0.05) disease severity on seedlings in greenhouse trials, but not in field trials. Seed treatments, while a valuable tool, should not be used as the only means to manage blackleg. -
Redisposition of Phoma-Like Anamorphs in Pleosporales
available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 75: 1–36. Redisposition of phoma-like anamorphs in Pleosporales J. de Gruyter1–3*, J.H.C. Woudenberg1, M.M. Aveskamp1, G.J.M. Verkley1, J.Z. Groenewald1, and P.W. Crous1,3,4 1CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands; 2National Reference Centre, National Plant Protection Organization, P.O. Box 9102, 6700 HC Wageningen, The Netherlands; 3Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands; 4Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands *Correspondence: Hans de Gruyter, [email protected] Abstract: The anamorphic genus Phoma was subdivided into nine sections based on morphological characters, and included teleomorphs in Didymella, Leptosphaeria, Pleospora and Mycosphaerella, suggesting the polyphyly of the genus. Recent molecular, phylogenetic studies led to the conclusion that Phoma should be restricted to Didymellaceae. The present study focuses on the taxonomy of excluded Phoma species, currently classified inPhoma sections Plenodomus, Heterospora and Pilosa. Species of Leptosphaeria and Phoma section Plenodomus are reclassified in Plenodomus, Subplenodomus gen. nov., Leptosphaeria and Paraleptosphaeria gen. nov., based on the phylogeny determined by analysis of sequence data of the large subunit 28S nrDNA (LSU) and Internal Transcribed Spacer regions 1 & 2 and 5.8S nrDNA (ITS). Phoma heteromorphospora, type species of Phoma section Heterospora, and its allied species Phoma dimorphospora, are transferred to the genus Heterospora stat. nov. The Phoma acuta complex (teleomorph Leptosphaeria doliolum), is revised based on a multilocus sequence analysis of the LSU, ITS, small subunit 18S nrDNA (SSU), β-tubulin (TUB), and chitin synthase 1 (CHS-1) regions. -
Paraconiothyrium, a New Genus to Accommodate the Mycoparasite Coniothyrium Minitans, Anamorphs of Paraphaeosphaeria, and Four New Species
STUDIES IN MYCOLOGY 50: 323–335. 2004. Paraconiothyrium, a new genus to accommodate the mycoparasite Coniothyrium minitans, anamorphs of Paraphaeosphaeria, and four new species 1* 2 3 1 Gerard J.M. Verkley , Manuela da Silva , Donald T. Wicklow and Pedro W. Crous 1Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, PO Box 85167, NL-3508 AD Utrecht, the Netherlands; 2Fungi Section, Department of Microbiology, INCQS/FIOCRUZ, Av. Brasil, 4365; CEP: 21045-9000, Manguinhos, Rio de Janeiro, RJ, Brazil. 3Mycotoxin Research Unit, National Center for Agricultural Utilization Research, 1815 N. University Street, Peoria, IL 61604, Illinois, U.S.A. *Correspondence: Gerard J.M. Verkley, [email protected] Abstract: Coniothyrium-like coelomycetes are drawing attention as biological control agents, potential bioremediators, and producers of antibiotics. Four genera are currently used to classify such anamorphs, namely, Coniothyrium, Microsphaeropsis, Cyclothyrium, and Cytoplea. The morphological plasticity of these fungi, however, makes it difficult to ascertain their best generic disposition in many cases. A new genus, Paraconiothyrium is here proposed to accommodate four new species, P. estuarinum, P. brasiliense, P. cyclothyrioides, and P. fungicola. Their formal descriptions are based on anamorphic characters as seen in vitro. The teleomorphs of these species are unknown, but maximum parsimony analysis of ITS and partial SSU nrDNA sequences showed that they belong in the Pleosporales and group in a clade including Paraphaeosphaeria s. str., the biocontrol agent Coniothyrium minitans, and the ubiquitous soil fungus Coniothyrium sporulosum. Coniothyrium minitans and C. sporulosum are therefore also combined into the genus Paraconiothyrium. The anamorphs of Paraphaeosphaeria michotii and Paraphaeosphaeria pilleata are regarded representative of Paraconiothyrium, but remain formally unnamed. -
The Sexual State of Setophoma
Phytotaxa 176 (1): 260–269 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Article PHYTOTAXA Copyright © 2014 Magnolia Press ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.176.1.25 The sexual state of Setophoma RUNGTIWA PHOOKAMSAK1,2,3,4,5, JIAN-KUI LIU3,4, DIMUTHU S. MANAMGODA3,4, EKACHAI CHUKEATIROTE3,4, PETER E. MORTIMER1,2, ERIC H.C. MCKENZIE6 & KEVIN D. HYDE1,2,3,4,5 1 World Agroforestry Centre, East and Central Asia, Kunming 650201, China 2 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China 3 Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 4School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand 5 International Fungal Research & Development Centre, Research Institute of Resource Insects, Chinese Academy of Forestry, Kunming, Yunnan, 650224, PR China 6 Landcare Research, Private Bag 92170, Auckland, New Zealand Abstract A sexual state of Setophoma, a coelomycete genus of Phaeosphaeriaceae, was found causing leaf spots of sugarcane (Saccharum officinarum). Pure cultures from single ascospores produced the asexual morph on rice straw and bamboo pieces on water agar. Multiple gene phylogenetic analysis using ITS, LSU and RPB2 showed that our strains belong to the family Phaeosphaeriaceae. The strains clustered with Setophoma sacchari with strong support (100% ML, 100% MP and 1.00 PP) and formed a well-supported clade with other Setophoma species. Therefore our strains are identified as S. sacchari. In this paper descriptions and photographs of the sexual and asexual morphs of S. -
August 2006 Newsletter of the Mycological Society of America
Supplement to Mycologia Vol. 57(4) August 2006 Newsletter of the Mycological Society of America — In This Issue — Systematic Botany & Mycology Laboratory: Home of the U.S. National Fungus Collections Systematic Botany & Mycology Laboratory: Home By Amy Rossman of the U.S. National Fungus At present the USDA Agricultural Research Service’ Systematic Collections . 1 Botany and Mycology Laboratory (SBML) in Beltsville, Maryland, serves Myxomycetes (True Slime as the research base for five systematic mycologists plus two plant-quar- Molds): Educational Sources antine mycologists. The SBML is also the organization that maintains the for Students and Teachers U.S. National Fungus Collections with databases about plant-associated Part II . 4 fungi. The direction of the research and extent of the fungal databases has changed over the past two decades in order to meet the needs of U.S. agri- MSA Business . 6 culture. This invited feature article will present an overview of the U.S. MSA Abstracts . 11 National Fungus Collections, the world’s largest fungus collection, and associated databases and interactive keys available at the Web site and re- Mycological News . 41 view the research conducted by mycologists currently at SBML. Mycologist’s Bookshelf . 44 Essential to the needs of scientists at SBML and available to scientists worldwide are the mycological resources maintained at SBML. Primary Mycological Classifieds . 49 among these are the one-million specimens in the U.S. National Fungus Calender of Events . 50 Collections. Collections Manager Erin McCray ensures that these speci- mens are well-maintained and can be obtained on loan for research proj- Mycology On-Line . -
A Worldwide List of Endophytic Fungi with Notes on Ecology and Diversity
Mycosphere 10(1): 798–1079 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/19 A worldwide list of endophytic fungi with notes on ecology and diversity Rashmi M, Kushveer JS and Sarma VV* Fungal Biotechnology Lab, Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry 605014, Puducherry, India Rashmi M, Kushveer JS, Sarma VV 2019 – A worldwide list of endophytic fungi with notes on ecology and diversity. Mycosphere 10(1), 798–1079, Doi 10.5943/mycosphere/10/1/19 Abstract Endophytic fungi are symptomless internal inhabits of plant tissues. They are implicated in the production of antibiotic and other compounds of therapeutic importance. Ecologically they provide several benefits to plants, including protection from plant pathogens. There have been numerous studies on the biodiversity and ecology of endophytic fungi. Some taxa dominate and occur frequently when compared to others due to adaptations or capabilities to produce different primary and secondary metabolites. It is therefore of interest to examine different fungal species and major taxonomic groups to which these fungi belong for bioactive compound production. In the present paper a list of endophytes based on the available literature is reported. More than 800 genera have been reported worldwide. Dominant genera are Alternaria, Aspergillus, Colletotrichum, Fusarium, Penicillium, and Phoma. Most endophyte studies have been on angiosperms followed by gymnosperms. Among the different substrates, leaf endophytes have been studied and analyzed in more detail when compared to other parts. Most investigations are from Asian countries such as China, India, European countries such as Germany, Spain and the UK in addition to major contributions from Brazil and the USA. -
Neoleptosphaeria Jonesii Sp. Nov., a Novel Saprobic Sexual Species, in Leptosphaeriaceae
Mycosphere 7 (9): 1368–1377 (2016) www.mycosphere.org ISSN 2077 7019 Article – special issue Doi 10.5943/mycosphere/7/9/10 Copyright © Guizhou Academy of Agricultural Sciences Neoleptosphaeria jonesii sp. nov., a novel saprobic sexual species, in Leptosphaeriaceae Wanasinghe DN1,2, Camporesi E3,4 and Hu DM1 1 College of Bioscience and Bioengineering, Jiangxi Agricultural University, Nanchang 330045, China 2 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3 Società per gli Studi Naturalistici della Romagna, C.P. 144, Bagnacavallo (RA), Italy 4 A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy; A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314, Brescia, Italy Wanasinghe DN, Camporesi E, Hu DM 2016 – Neoleptosphaeria jonesii sp. nov., a novel saprobic sexual species, in Leptosphaeriaceae. Mycosphere 7 (9), 1368–1377, Doi 10.5943/mycosphere/7/9/10 Abstract Neoleptosphaeria is a genus of ascomycetes known only from its asexual morphs (coelomycetous) and its species have saprobic and / or endophytic life modes. We obtained LSU, SSU and ITS sequence data from a single spore isolation of a freshly collected specimen. A phylogeny of representative strains of the genus and other taxa in Leptosphaeriaceae was obtained. Neoleptosphaeria proved to be strongly monophyletic but related to other genera in Leptosphaeriaceae. Phylogenetic analyses place our new isolate in a strongly supported clade with the generic type of Neoleptosphaeria (N. rubefaciens). The sexual morph of Neoleptosphaeria is therefore established and includes the first genus with muriform ascospores in Leptosphaeriaceae. Keywords – asexual morph – dictyospores – Italy – phylogeny – taxonomy Introduction Barr (1987) established the family Leptosphaeriaceae species with having a conical or globose ascomata, narrow asci with thin walls and coelomycetous asexual morphs in the order Pleosporales.