Trait Evolution in Spiders: Perspectives on the Evolution of Behavioral Syndromes and Web Structures
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Untangling Taxonomy: a DNA Barcode Reference Library for Canadian Spiders
Molecular Ecology Resources (2016) 16, 325–341 doi: 10.1111/1755-0998.12444 Untangling taxonomy: a DNA barcode reference library for Canadian spiders GERGIN A. BLAGOEV, JEREMY R. DEWAARD, SUJEEVAN RATNASINGHAM, STEPHANIE L. DEWAARD, LIUQIONG LU, JAMES ROBERTSON, ANGELA C. TELFER and PAUL D. N. HEBERT Biodiversity Institute of Ontario, University of Guelph, Guelph, ON, Canada Abstract Approximately 1460 species of spiders have been reported from Canada, 3% of the global fauna. This study provides a DNA barcode reference library for 1018 of these species based upon the analysis of more than 30 000 specimens. The sequence results show a clear barcode gap in most cases with a mean intraspecific divergence of 0.78% vs. a min- imum nearest-neighbour (NN) distance averaging 7.85%. The sequences were assigned to 1359 Barcode index num- bers (BINs) with 1344 of these BINs composed of specimens belonging to a single currently recognized species. There was a perfect correspondence between BIN membership and a known species in 795 cases, while another 197 species were assigned to two or more BINs (556 in total). A few other species (26) were involved in BIN merges or in a combination of merges and splits. There was only a weak relationship between the number of specimens analysed for a species and its BIN count. However, three species were clear outliers with their specimens being placed in 11– 22 BINs. Although all BIN splits need further study to clarify the taxonomic status of the entities involved, DNA bar- codes discriminated 98% of the 1018 species. The present survey conservatively revealed 16 species new to science, 52 species new to Canada and major range extensions for 426 species. -
Comparative Functional Morphology of Attachment Devices in Arachnida
Comparative functional morphology of attachment devices in Arachnida Vergleichende Funktionsmorphologie der Haftstrukturen bei Spinnentieren (Arthropoda: Arachnida) DISSERTATION zur Erlangung des akademischen Grades doctor rerum naturalium (Dr. rer. nat.) an der Mathematisch-Naturwissenschaftlichen Fakultät der Christian-Albrechts-Universität zu Kiel vorgelegt von Jonas Otto Wolff geboren am 20. September 1986 in Bergen auf Rügen Kiel, den 2. Juni 2015 Erster Gutachter: Prof. Stanislav N. Gorb _ Zweiter Gutachter: Dr. Dirk Brandis _ Tag der mündlichen Prüfung: 17. Juli 2015 _ Zum Druck genehmigt: 17. Juli 2015 _ gez. Prof. Dr. Wolfgang J. Duschl, Dekan Acknowledgements I owe Prof. Stanislav Gorb a great debt of gratitude. He taught me all skills to get a researcher and gave me all freedom to follow my ideas. I am very thankful for the opportunity to work in an active, fruitful and friendly research environment, with an interdisciplinary team and excellent laboratory equipment. I like to express my gratitude to Esther Appel, Joachim Oesert and Dr. Jan Michels for their kind and enthusiastic support on microscopy techniques. I thank Dr. Thomas Kleinteich and Dr. Jana Willkommen for their guidance on the µCt. For the fruitful discussions and numerous information on physical questions I like to thank Dr. Lars Heepe. I thank Dr. Clemens Schaber for his collaboration and great ideas on how to measure the adhesive forces of the tiny glue droplets of harvestmen. I thank Angela Veenendaal and Bettina Sattler for their kind help on administration issues. Especially I thank my students Ingo Grawe, Fabienne Frost, Marina Wirth and André Karstedt for their commitment and input of ideas. -
Spider Records from Colin-Cornwall Lakes Wildland Provincial Park
SPIDER RECORDS FROM COLIN-CORNWALL LAKES WILDLAND PROVINCIAL PARK Larinioides cornutus Thanatus coloradensis (Photo by D. Buckle) (Photo by D. Buckle) Prepared by Wayne Nordstrom1 and Don Buckle2 March 2004 1Alberta Natural Heritage Information Centre Parks and Protected Areas Division Alberta Community Development 2 620 Albert Avenue Saskatoon, SK S7N 1G7 Table of Contents 1. Introduction.................................................................................................................................. 1 2. The Study Site.............................................................................................................................. 1 3. Methods ....................................................................................................................................... 3 3.1 Survey Dates....................................................................................................................... 3 3.2 Collection of Spiders .......................................................................................................... 3 3.3 Identification of Spiders ..................................................................................................... 4 4. Results and Discussion ................................................................................................................ 4 5. Conclusion ...................................................................................................................................11 6. Acknowlegements........................................................................................................................11 -
SPIDERS of WASHINGTON COUNTY, MISSISSIPPI Orrey P. Young Southern Field Crop Insect Management Laboratory USDA-ARS, P.O. Box
Young, O . P., T. C . Lockley and G . B . Edwards . 1989 . Spiders of Washington County, Mississippi . J . Arachnol ., 17 :27-41 . SPIDERS OF WASHINGTON COUNTY, MISSISSIPPI Orrey P. Young Southern Field Crop Insect Management Laboratory USDA-ARS, P.O. Box 346 Stoneville, Mississippi 38776 USA Timothy C. Lockley Imported Fire Ant Station USDA-APHIS-PPQ 3505 25th Avenue Gulfport, Mississippi 39501 USA and G. B. Edwards Florida State Collection of Arthropods Division of Plant Industry Florida Dept. Agric. & Cons . Serv. P.O. Box 1269 Gainesville, Florida 32602 USA ABSTRACT Over a seven-year period, approximately 35,000 spiders representing 26 families, 133 genera, and 234 species were captured in Washington County, Mississippi, by pitfall, sweepnet, vacuum, bag, and hand. Specimens were collected in 10 different habitat types and in four vegetational strata . Old-field habitats yielded the most species (152) and residential lawns the fewest (14) . Considering all habitats sampled, the ground layer produced 111 species, the herbaceous strata 133, the shrub layer 49, and the tree strata 30 species . The sweepnet method of capture obtained 128 species, pitfall 95, hand 61, vacuum 53, and bagging 19 species. The largest number of species were obtained in spring and early summer (maximum of 125 in May), with the fewest in mid-winter (Jan . = 24) . Twenty-one species were considered abundant, 51 common, 67 uncommon, and 95 rare . Additions to the state list of Dorris (1972) number 102 species, for a new state total of 364 species . A comparison with the North American fauna and with other surveys indicates that Washington County is underrepresented both in cursorial forms active on the soil surface and web-spinning forms typical of undisturbed habitats . -
Records of the Hawaii Biological Survey for 1996
Records of the Hawaii Biological Survey for 1996. Bishop Museum Occasional Papers 49, 71 p. (1997) RECORDS OF THE HAWAII BIOLOGICAL SURVEY FOR 1996 Part 2: Notes1 This is the second of 2 parts to the Records of the Hawaii Biological Survey for 1996 and contains the notes on Hawaiian species of protists, fungi, plants, and animals includ- ing new state and island records, range extensions, and other information. Larger, more comprehensive treatments and papers describing new taxa are treated in the first part of this Records [Bishop Museum Occasional Papers 48]. Foraminifera of Hawaii: Literature Survey THOMAS A. BURCH & BEATRICE L. BURCH (Research Associates in Zoology, Hawaii Biological Survey, Bishop Museum, 1525 Bernice Street, Honolulu, HI 96817, USA) The result of a compilation of a checklist of Foraminifera of the Hawaiian Islands is a list of 755 taxa reported in the literature below. The entire list is planned to be published as a Bishop Museum Technical Report. This list also includes other names that have been applied to Hawaiian foraminiferans. Loeblich & Tappan (1994) and Jones (1994) dis- agree about which names should be used; therefore, each is cross referenced to the other. Literature Cited Bagg, R.M., Jr. 1980. Foraminifera collected near the Hawaiian Islands by the Steamer Albatross in 1902. Proc. U.S. Natl. Mus. 34(1603): 113–73. Barker, R.W. 1960. Taxonomic notes on the species figured by H. B. Brady in his report on the Foraminifera dredged by HMS Challenger during the years 1873–1876. Soc. Econ. Paleontol. Mineral. Spec. Publ. 9, 239 p. Belford, D.J. -
Gelenopsis Naevia Walckenaer, 1842 (Grass Spider)Venom
STUDIES ON ANTIMICROBIAL AND HAEMOLYTIC ACTIVITIES, PROTEIN PROFILE AND TRANSCRIPTOMES OF AGELENOPSIS NAEVIA WALCKENAER, 1842 (GRASS SPIDER)VENOM BY JAMILA AHMED DEPARTMENT OF BIOLOGICAL SCIENCES, AHMADU BELLO UNIVERSITY, ZARIA AUGUST, 2016 i STUDIES ON ANTIMICROBIAL AND HAEMOLYTIC ACTIVITIES, PROTEIN PROFILE AND TRANSCRIPTOMES OF AGELENOPSIS NAEVIA WALCKENAER, 1842 (GRASS SPIDER)VENOM BY JamilaAHMED M. Sc/Sci/32878/2012-2013 A DISSERTATION SUBMITTED TO THE SCHOOL OF POSTGRADUATE STUDIES, AHMADU BELLO UNIVERSITY, ZARIA. IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE AWARD OF A MASTER DEGREE IN BIOLOGY DEPARTMENT OF BIOLOGICAL SCIENCES, FACULTY OF SCIENCE AHMADU BELLO UNIVERSITY, ZARIA AUGUST, 2016 ii DECLARATION I declare that the work in this dissertation, entitled, ―Studies on antimicrobial and haemolytic activities, protein profile and transcriptomes of Agelenopsis naevia Walckenaer, 1842 (grass spider) venom” was carried out by me in the Department of Biological Sciences, Faculty of Science, Ahmadu Bello University Zaria under the supervision of Prof. I. S. Ndams and Dr. D. M. Shehu. All information derived from the literature has been duly acknowledged in the text and a list of references provided. No part of this dissertation was previously presented for another degree or diploma at any university. Jamila Ahmed ----------------------------------- -------------------------------- Signature Date iii CERTIFICATION This dissertation, entitled STUDIES ON ANTIMICROBIAL AND HAEMOLYTIC ACTIVITIES, PROTEIN PROFILE AND TRANSCRIPTOMES OF AGELENOPSIS NAEVIA WALCKENAER, 1842 (GRASS SPIDER) VENOMby Jamila Ahmed meets the regulation governing the award of Master of Science in Biology of the Ahmadu Bello University, Zaria, and is approved for its contribution to knowledge and literary presentation. Prof. I. S. Ndams------------------------- -------------------------- Chairman Supervisory CommitteeSignature Date Department of Biological Sciences, Faculty of Science, Ahmadu Bello University, Zaria Dr. -
The University of Chicago Epistasis, Contingency, And
THE UNIVERSITY OF CHICAGO EPISTASIS, CONTINGENCY, AND EVOLVABILITY IN THE SEQUENCE SPACE OF ANCIENT PROTEINS A DISSERTATION SUBMITTED TO THE FACULTY OF THE DIVISION OF THE BIOLOGICAL SCIENCES AND THE PRITZKER SCHOOL OF MEDICINE IN CANDIDACY FOR THE DEGREE OF DOCTOR OF PHILOSOPHY GRADUATE PROGRAM IN BIOCHEMISTRY AND MOLECULAR BIOPHYSICS BY TYLER NELSON STARR CHICAGO, ILLINOIS AUGUST 2018 Table of Contents List of Figures .................................................................................................................... iv List of Tables ..................................................................................................................... vi Acknowledgements ........................................................................................................... vii Abstract .............................................................................................................................. ix Chapter 1 Introduction ......................................................................................................1 1.1 Sequence space and protein evolution .............................................................1 1.2 Deep mutational scanning ................................................................................2 1.3 Epistasis ...........................................................................................................3 1.4 Chance and determinism ..................................................................................4 1.5 Evolvability ......................................................................................................6 -
What Can We Learn from Fitness Landscapes?
What can we learn from fitness landscapes? The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Hartl, Daniel L. 2014. “What Can We Learn from Fitness Landscapes?” Current Opinion in Microbiology 21 (October): 51–57. doi:10.1016/j.mib.2014.08.001. Published Version 10.1016/j.mib.2014.08.001 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:22898356 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Open Access Policy Articles, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#OAP Elsevier Editorial System(tm) for Current Opinion in Microbiology Manuscript Draft Manuscript Number: Title: What Can We Learn From Fitness Landscapes? Article Type: 22 Growth&Develop: prokaryotes (2014 Corresponding Author: Dr. Daniel Hartl, Corresponding Author's Institution: First Author: Daniel Hartl Order of Authors: Daniel Hartl Manuscript Click here to view linked References What Can We Learn From Fitness Landscapes? Daniel L. Hartl Department of Organismic and Evolutionary Biology Harvard University Cambridge, Massachusetts 02138 USA Contact information: Email: [email protected], TEL: 617-396-3917 In evolutionary biology, the fitness landscape of set of mutants is the mapping of genotypes onto phenotypes when the phenotype is fitness or some proxy for fitness such as growth rate or drug resistance. When the set of mutants is not too large, it is possible to create every possible combination of mutants and map these to fitness. -
Tarantulas and Social Spiders
Tarantulas and Social Spiders: A Tale of Sex and Silk by Jonathan Bull BSc (Hons) MSc ICL Thesis Presented to the Institute of Biology of The University of Nottingham in Partial Fulfilment of the Requirements for the Degree of Doctor of Philosophy The University of Nottingham May 2012 DEDICATION To my parents… …because they both said to dedicate it to the other… I dedicate it to both ii ACKNOWLEDGEMENTS First and foremost I would like to thank my supervisor Dr Sara Goodacre for her guidance and support. I am also hugely endebted to Dr Keith Spriggs who became my mentor in the field of RNA and without whom my understanding of the field would have been but a fraction of what it is now. Particular thanks go to Professor John Brookfield, an expert in the field of biological statistics and data retrieval. Likewise with Dr Susan Liddell for her proteomics assistance, a truly remarkable individual on par with Professor Brookfield in being able to simplify even the most complex techniques and analyses. Finally, I would really like to thank Janet Beccaloni for her time and resources at the Natural History Museum, London, permitting me access to the collections therein; ten years on and still a delight. Finally, amongst the greats, Alexander ‘Sasha’ Kondrashov… a true inspiration. I would also like to express my gratitude to those who, although may not have directly contributed, should not be forgotten due to their continued assistance and considerate nature: Dr Chris Wade (five straight hours of help was not uncommon!), Sue Buxton (direct to my bench creepy crawlies), Sheila Keeble (ventures and cleans where others dare not), Alice Young (read/checked my thesis and overcame her arachnophobia!) and all those in the Centre for Biomolecular Sciences. -
Individuals Differences in Exploratory Behavior of Prairie Voles, Microtus Ochrogaster Danielle N
University of Missouri, St. Louis IRL @ UMSL Dissertations UMSL Graduate Works 5-14-2010 Individuals Differences in Exploratory Behavior of Prairie Voles, Microtus ochrogaster Danielle N. Lee University of Missouri-St. Louis, [email protected] Follow this and additional works at: https://irl.umsl.edu/dissertation Part of the Biology Commons Recommended Citation Lee, Danielle N., "Individuals Differences in Exploratory Behavior of Prairie Voles, Microtus ochrogaster" (2010). Dissertations. 479. https://irl.umsl.edu/dissertation/479 This Dissertation is brought to you for free and open access by the UMSL Graduate Works at IRL @ UMSL. It has been accepted for inclusion in Dissertations by an authorized administrator of IRL @ UMSL. For more information, please contact [email protected]. Individuals Differences in Exploratory Behavior of Prairie Voles, Microtus ochrogaster Danielle N. Lee M.S. in Biology, August, 2000, University of Memphis B.S. in Animal Science, August, 1996, Tennessee Technological University A Dissertation Submitted to The Graduate School at the University of Missouri – St. Louis in partial fulfillment of the requirements for the degree Doctorate of Philosophy in Biology March 2010 Advisory Committee Zuleyma Tang-Martínez, Ph.D. Chairperson George Taylor, Ph.D. Stan Braude, Ph.D. Lon Wilkens, Ph.D. Copyright, Danielle N. Lee, 2010 Lee, Danielle N., 2010 UMSL ii ACKNOWLEDGEMENTS First and foremost, it has been a joy to have studied with the scientists in this department. They have been amazing role models and leaders in academia. Of special note are Dr. Patricia Parker, Dr. Elizabeth Kellogg, Dr. Charles Granger, Dr. Patrick Osborne, Dr. Robert Marquis, and Dr. -
Funnel Weaver Spiders (Funnel-Web Weavers, Grass Spiders)
Colorado Arachnids of Interest Funnel Weaver Spiders (Funnel-web weavers, Grass spiders) Class: Arachnida (Arachnids) Order: Araneae (Spiders) Family: Agelenidae (Funnel weaver Figure 1. Female grass spider on sheet web. spiders) Identification and Descriptive Features: Funnel weaver spiders are generally brownish or grayish spiders with a body typically ranging from1/3 to 2/3-inch when full grown. They have four pairs of eyes that are roughly the same size. The legs and body are hairy and legs usually have some dark banding. They are often mistaken for wolf spiders (Lycosidae family) but the size and pattern of eyes can most easily distinguish them. Like wolf spiders, the funnel weavers are very fast runners. Among the three most common genera (Agelenopsis, Hololena, Tegenaria) found in homes and around yards, Agelenopsis (Figures 1, 2 and 3) is perhaps most easily distinguished as it has long tail-like structures extending from the rear end of the body. These structures are the spider’s spinnerets, from which the silk emerges. Males of this genus have a unique and peculiarly coiled structure (embolus) on their pedipalps (Figure 3), the appendages next to the mouthparts. Hololena species often have similar appearance but lack the elongated spinnerets and male pedipalps have a normal clubbed appearance. Spiders within both genera Figure 2. Adult female of a grass spider, usually have dark longitudinal bands that run along the Agelenopsis sp. back of the cephalothorax and an elongated abdomen. Tegenaria species tend to have blunter abdomens marked with gray or black patches. Dark bands may also run along the cephalothorax, which is reddish brown with yellowish hairs in the species Tegenaria domestica (Figure 4). -
Occasional Papers
NUMBER 136, 37 pages 28 August 2020 BISHOP MUSEUM OCCASIONAL PAPERS TAXONOMIC REVISION AND BIOGEOGRAPHY OF PHASSODES BETHUNE -B AKER , 1905 (L EPIDOPTERA : H EPIALIDAE ), GHOST MOTH DESCENDANTS OF A SUBDUCTION ZONE WEED IN THE SOUTH -WEST PACIFIC JOHN R. G REHAN & C ARLOS G.C. M IELKE BISHOP MUSEUM PRESS HONOLULU Cover illustration: Selection of scales from central forewing of Phassodes spp. (see page 14). Photos by James Boone, Miho Maeda, and Agnes Stubblefield. Bishop Museum Press has been publishing scholarly books on the natu - ESEARCH ral and cultural history of Hawai‘i and the Pacific since 1892. The R Bishop Museum Occasional Papers (eISSN 2376-3191) is a series of UBLICATIONS OF short papers describing original research in the natural and cultural sci - P ences. BISHOP MUSEUM The Bishop Museum Press also published the Bishop Museum Bulletin series. It was begun in 1922 as a series of monographs presenting the results of research in many scientific fields throughout the Pacific. In 1987, the Bulletin series was superceded by the Museum’s five current monographic series, issued irregularly: Bishop Museum Bulletins in Anthropology (eISSN 2376-3132) Bishop Museum Bulletins in Botany (eISSN 2376-3078) Bishop Museum Bulletins in Entomology (eISSN 2376-3124) Bishop Museum Bulletins in Zoology (eISSN 2376-3213) Bishop Museum Bulletins in Cultural and Environmental Studies (eISSN 2376-3159) To subscribe to any of the above series, or to purchase individual publi - cations, please write to: Bishop Museum Press, 1525 Bernice Street, Honolulu, Hawai‘i 96817-2704, USA. Phone: (808) 848-4135. Email: [email protected]. BERNICE PAUAHI BISHOP MUSEUM The State Museum of Natural and Cultural History eISSN 2376-3191 1525 Bernice Street Copyright © by Bishop Museum Honolulu, Hawai‘i 96817-2704, USA Published online: 28 August 2020 ISSN (online) 2376-3191 Taxonomic revision and biogeography of Phassodes Bethune-Baker, 1905 (Lepidoptera: Hepialidae), ghost moth descendants of a subduc - tion zone weed in the south-west Pacific.