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Identification of Mutant Genes and Introgressed Tiger Salamander
www.nature.com/scientificreports OPEN Identification of Mutant Genes and Introgressed Tiger Salamander DNA in the Laboratory Axolotl, Received: 13 October 2016 Accepted: 19 December 2016 Ambystoma mexicanum Published: xx xx xxxx M. Ryan Woodcock1, Jennifer Vaughn-Wolfe1, Alexandra Elias2, D. Kevin Kump1, Katharina Denise Kendall1,5, Nataliya Timoshevskaya1, Vladimir Timoshevskiy1, Dustin W. Perry3, Jeramiah J. Smith1, Jessica E. Spiewak4, David M. Parichy4,6 & S. Randal Voss1 The molecular genetic toolkit of the Mexican axolotl, a classic model organism, has matured to the point where it is now possible to identify genes for mutant phenotypes. We used a positional cloning– candidate gene approach to identify molecular bases for two historic axolotl pigment phenotypes: white and albino. White (d/d) mutants have defects in pigment cell morphogenesis and differentiation, whereas albino (a/a) mutants lack melanin. We identified in white mutants a transcriptional defect in endothelin 3 (edn3), encoding a peptide factor that promotes pigment cell migration and differentiation in other vertebrates. Transgenic restoration of Edn3 expression rescued the homozygous white mutant phenotype. We mapped the albino locus to tyrosinase (tyr) and identified polymorphisms shared between the albino allele (tyra) and tyr alleles in a Minnesota population of tiger salamanders from which the albino trait was introgressed. tyra has a 142 bp deletion and similar engineered alleles recapitulated the albino phenotype. Finally, we show that historical introgression of tyra significantly altered genomic composition of the laboratory axolotl, yielding a distinct, hybrid strain of ambystomatid salamander. Our results demonstrate the feasibility of identifying genes for traits in the laboratory Mexican axolotl. The Mexican axolotl (Ambystoma mexicanum) is the primary salamander model in biological research. -
Zoology SYLLABUS 2016
ST. PHILOMENA’S COLLEGE (AUTONOMOUS), MYSORE-570 015 Subject- ZOOLOGY Syllabus for B.A, Course under Semester Scheme. The Scheme of Teaching & Examination FROM THE ACADEMIC YEAR- 2016 Onwards Semester Title of the Paper Q. P. Code Teaching Scheme Examination Scheme Number Hours per Week Theory/ I A Total Practical Max Marks Proper Max. Marks hours Marks Theory Credits Practical Duration in in Duration MA 630 MA 631 IA T-60 T IA-10 3 I Animal Diversity I MA 632 PR-1 3 4.5 6 P-20 P IA-10 100 MA 633 PR- IA MB 630 MB 631 IA T-60 T IA-10 3 II Animal Diversity II MB632 PR-1 3 4.5 6 P-20 P IA-10 100 MB 633 PR- IA MC 630 T-60 T IA-10 MC 631 IA 3 III Animal Diversity III 3 4.5 6 P-20 P IA-10 100 MC 632 PR-1 MC 633 PR-1 MD 630 T-60 T IA-10 Biochemistry and MD 631 IA 3 IV 3 4.5 6 P-20 P IA-10 100 physiology MD 632 PR-1 MD 633 PR-1 ME 630 T IA T IA -20 Cell biology & ME 631 T IA 3 T- 80 3 4.5 6 P IA- 150 Immunology (P-5) ME 634 PR P- 40 10 ME 635 PR IA V ME 632 T IA Development biology T IA -20 ME 633 T IA 3 T- 80 & endocrinology 3 4.5 6 P IA- 150 ME 636 PR P- 40 (P-6) 10 ME 637 PR IA MF 630 T IA T IA -20 Genetics & evolution MF 631 T IA 3 T- 80 3 4.5 6 P IA- 150 (P-7) MF 634 PR P- 40 10 MF 635 PR IA VI MF 632 T IA Environmental T IA -20 MF 633 T IA 3 T- 80 Biology & Ethnology 3 4.5 6 P IA- 150 MF 636 PR P- 40 (P-8) 10 MF 637 PR IA ST. -
CAT Vertebradosgt CDC CECON USAC 2019
Catálogo de Autoridades Taxonómicas de vertebrados de Guatemala CDC-CECON-USAC 2019 Centro de Datos para la Conservación (CDC) Centro de Estudios Conservacionistas (Cecon) Facultad de Ciencias Químicas y Farmacia Universidad de San Carlos de Guatemala Este documento fue elaborado por el Centro de Datos para la Conservación (CDC) del Centro de Estudios Conservacionistas (Cecon) de la Facultad de Ciencias Químicas y Farmacia de la Universidad de San Carlos de Guatemala. Guatemala, 2019 Textos y edición: Manolo J. García. Zoólogo CDC Primera edición, 2019 Centro de Estudios Conservacionistas (Cecon) de la Facultad de Ciencias Químicas y Farmacia de la Universidad de San Carlos de Guatemala ISBN: 978-9929-570-19-1 Cita sugerida: Centro de Estudios Conservacionistas [Cecon]. (2019). Catálogo de autoridades taxonómicas de vertebrados de Guatemala (Documento técnico). Guatemala: Centro de Datos para la Conservación [CDC], Centro de Estudios Conservacionistas [Cecon], Facultad de Ciencias Químicas y Farmacia, Universidad de San Carlos de Guatemala [Usac]. Índice 1. Presentación ............................................................................................ 4 2. Directrices generales para uso del CAT .............................................. 5 2.1 El grupo objetivo ..................................................................... 5 2.2 Categorías taxonómicas ......................................................... 5 2.3 Nombre de autoridades .......................................................... 5 2.4 Estatus taxonómico -
Catalogue of the Amphibians of Venezuela: Illustrated and Annotated Species List, Distribution, and Conservation 1,2César L
Mannophryne vulcano, Male carrying tadpoles. El Ávila (Parque Nacional Guairarepano), Distrito Federal. Photo: Jose Vieira. We want to dedicate this work to some outstanding individuals who encouraged us, directly or indirectly, and are no longer with us. They were colleagues and close friends, and their friendship will remain for years to come. César Molina Rodríguez (1960–2015) Erik Arrieta Márquez (1978–2008) Jose Ayarzagüena Sanz (1952–2011) Saúl Gutiérrez Eljuri (1960–2012) Juan Rivero (1923–2014) Luis Scott (1948–2011) Marco Natera Mumaw (1972–2010) Official journal website: Amphibian & Reptile Conservation amphibian-reptile-conservation.org 13(1) [Special Section]: 1–198 (e180). Catalogue of the amphibians of Venezuela: Illustrated and annotated species list, distribution, and conservation 1,2César L. Barrio-Amorós, 3,4Fernando J. M. Rojas-Runjaic, and 5J. Celsa Señaris 1Fundación AndígenA, Apartado Postal 210, Mérida, VENEZUELA 2Current address: Doc Frog Expeditions, Uvita de Osa, COSTA RICA 3Fundación La Salle de Ciencias Naturales, Museo de Historia Natural La Salle, Apartado Postal 1930, Caracas 1010-A, VENEZUELA 4Current address: Pontifícia Universidade Católica do Río Grande do Sul (PUCRS), Laboratório de Sistemática de Vertebrados, Av. Ipiranga 6681, Porto Alegre, RS 90619–900, BRAZIL 5Instituto Venezolano de Investigaciones Científicas, Altos de Pipe, apartado 20632, Caracas 1020, VENEZUELA Abstract.—Presented is an annotated checklist of the amphibians of Venezuela, current as of December 2018. The last comprehensive list (Barrio-Amorós 2009c) included a total of 333 species, while the current catalogue lists 387 species (370 anurans, 10 caecilians, and seven salamanders), including 28 species not yet described or properly identified. Fifty species and four genera are added to the previous list, 25 species are deleted, and 47 experienced nomenclatural changes. -
Western Tiger Salamander,Ambystoma Mavortium
COSEWIC Assessment and Status Report on the Western Tiger Salamander Ambystoma mavortium Southern Mountain population Prairie / Boreal population in Canada Southern Mountain population – ENDANGERED Prairie / Boreal population – SPECIAL CONCERN 2012 COSEWIC status reports are working documents used in assigning the status of wildlife species suspected of being at risk. This report may be cited as follows: COSEWIC. 2012. COSEWIC assessment and status report on the Western Tiger Salamander Ambystoma mavortium in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. xv + 63 pp. (www.registrelep-sararegistry.gc.ca/default_e.cfm). Previous report(s): COSEWIC. 2001. COSEWIC assessment and status report on the tiger salamander Ambystoma tigrinum in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. vi + 33 pp. (www.sararegistry.gc.ca/status/status_e.cfm). Schock, D.M. 2001. COSEWIC assessment and status report on the tiger salamander Ambystoma tigrinum in Canada, in COSEWIC assessment and status report on the tiger salamander Ambystoma tigrinum in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. 1-33 pp. Production note: COSEWIC would like to acknowledge Arthur Whiting for writing the status report on the Western Tiger Salamander, Ambystoma mavortium, in Canada, prepared under contract with Environment Canada. This report was overseen and edited by Kristiina Ovaska, Co-chair of the COSEWIC Amphibians and Reptiles Specialist Subcommittee. For additional copies contact: COSEWIC Secretariat c/o Canadian Wildlife Service Environment Canada Ottawa, ON K1A 0H3 Tel.: 819-953-3215 Fax: 819-994-3684 E-mail: COSEWIC/[email protected] http://www.cosewic.gc.ca Également disponible en français sous le titre Ếvaluation et Rapport de situation du COSEPAC sur la Salamandre tigrée de l’Ouest (Ambystoma mavortium) au Canada. -
Nototriton Nelsoni Is a Moss Salamander Endemic to Cloud Forest in Refugio De Vida Silvestre Texíguat, Located in the Departments of Atlántida and Yoro, Honduras
Nototriton nelsoni is a moss salamander endemic to cloud forest in Refugio de Vida Silvestre Texíguat, located in the departments of Atlántida and Yoro, Honduras. This cryptic species long was confused with N. barbouri, a morphologically similar species now considered endemic to the Sierra de Sulaco in the southern part of the department of Yoro. Like many of its congeners, N. nelsoni rarely is observed in the wild, and is known from just five specimens. Pictured here is the holotype of N. nelsoni, collected above La Liberación in Refugio de Vida Silvestre Texíguat at an elevation of 1,420 m. This salamander is one of many herpetofaunal species endemic to the Cordillera Nombre de Dios. ' © Josiah H. Townsend 909 www.mesoamericanherpetology.com www.eaglemountainpublishing.com Amphibians of the Cordillera Nombre de Dios, Honduras: COI barcoding suggests underestimated taxonomic richness in a threatened endemic fauna JOSIAH H. TOWNSEND1 AND LARRY DAVID WILSON2 1Department of Biology, Indiana University of Pennsylvania, Indiana, Pennsylvania 15705–1081, United States. E-mail: [email protected] (Corresponding author) 2Centro Zamorano de Biodiversidad, Escuela Agrícola Panamericana Zamorano, Departamento de Francisco Morazán, Honduras; 16010 SW 207th Avenue, Miami, Florida 33187-1067, United States. E-mail: [email protected] ABSTRACT: The Cordillera Nombre de Dios is a chain of mountains along the northern coast of Honduras that harbors a high degree of herpetofaunal endemism. We present a preliminary barcode reference library of amphibians from the Cordillera Nombre de Dios, based on sampling at 10 sites from 2008 to 2013. We sequenced 187 samples of 21 nominal taxa for the barcoding locus cytochrome oxidase subunit I (COI), and recovered 28 well-differentiated clades. -
Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca
Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca John F. Lamoreux, Meghan W. McKnight, and Rodolfo Cabrera Hernandez Occasional Paper of the IUCN Species Survival Commission No. 53 Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca John F. Lamoreux, Meghan W. McKnight, and Rodolfo Cabrera Hernandez Occasional Paper of the IUCN Species Survival Commission No. 53 The designation of geographical entities in this book, and the presentation of the material, do not imply the expression of any opinion whatsoever on the part of IUCN concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. The views expressed in this publication do not necessarily reflect those of IUCN or other participating organizations. Published by: IUCN, Gland, Switzerland Copyright: © 2015 International Union for Conservation of Nature and Natural Resources Reproduction of this publication for educational or other non-commercial purposes is authorized without prior written permission from the copyright holder provided the source is fully acknowledged. Reproduction of this publication for resale or other commercial purposes is prohibited without prior written permission of the copyright holder. Citation: Lamoreux, J. F., McKnight, M. W., and R. Cabrera Hernandez (2015). Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca. Gland, Switzerland: IUCN. xxiv + 320pp. ISBN: 978-2-8317-1717-3 DOI: 10.2305/IUCN.CH.2015.SSC-OP.53.en Cover photographs: Totontepec landscape; new Plectrohyla species, Ixalotriton niger, Concepción Pápalo, Thorius minutissimus, Craugastor pozo (panels, left to right) Back cover photograph: Collecting in Chamula, Chiapas Photo credits: The cover photographs were taken by the authors under grant agreements with the two main project funders: NGS and CEPF. -
The Origins of Chordate Larvae Donald I Williamson* Marine Biology, University of Liverpool, Liverpool L69 7ZB, United Kingdom
lopmen ve ta e l B Williamson, Cell Dev Biol 2012, 1:1 D io & l l o l g DOI: 10.4172/2168-9296.1000101 e y C Cell & Developmental Biology ISSN: 2168-9296 Research Article Open Access The Origins of Chordate Larvae Donald I Williamson* Marine Biology, University of Liverpool, Liverpool L69 7ZB, United Kingdom Abstract The larval transfer hypothesis states that larvae originated as adults in other taxa and their genomes were transferred by hybridization. It contests the view that larvae and corresponding adults evolved from common ancestors. The present paper reviews the life histories of chordates, and it interprets them in terms of the larval transfer hypothesis. It is the first paper to apply the hypothesis to craniates. I claim that the larvae of tunicates were acquired from adult larvaceans, the larvae of lampreys from adult cephalochordates, the larvae of lungfishes from adult craniate tadpoles, and the larvae of ray-finned fishes from other ray-finned fishes in different families. The occurrence of larvae in some fishes and their absence in others is correlated with reproductive behavior. Adult amphibians evolved from adult fishes, but larval amphibians did not evolve from either adult or larval fishes. I submit that [1] early amphibians had no larvae and that several families of urodeles and one subfamily of anurans have retained direct development, [2] the tadpole larvae of anurans and urodeles were acquired separately from different Mesozoic adult tadpoles, and [3] the post-tadpole larvae of salamanders were acquired from adults of other urodeles. Reptiles, birds and mammals probably evolved from amphibians that never acquired larvae. -
EDGE of EXISTENCE 1Prioritising the Weird and Wonderful 3Making an Impact in the Field 2Empowering New Conservation Leaders A
EDGE OF EXISTENCE CALEB ON THE TRAIL OF THE TOGO SLIPPERY FROG Prioritising the Empowering new 10 weird and wonderful conservation leaders 1 2 From the very beginning, EDGE of Once you have identified the animals most in Existence was a unique idea. It is the need of action, you need to find the right people only conservation programme in the to protect them. Developing conservationists’ world to focus on animals that are both abilities in the countries where EDGE species YEARS Evolutionarily Distinct (ED) and Globally exist is the most effective and sustainable way to Endangered (GE). Highly ED species ensure the long-term survival of these species. have few or no close relatives on the tree From tracking wildlife populations to measuring of life; they represent millions of years the impact of a social media awareness ON THE of unique evolutionary history. Their campaign, the skill set of today’s conservation GE status tells us how threatened they champions is wide-ranging. Every year, around As ZSL’s EDGE of Existence conservation programme reaches are. ZSL conservationists use a scientific 10 early-career conservationists are awarded its first decade of protecting the planet’s most Evolutionarily framework to identify the animals that one of ZSL’s two-year EDGE Fellowships. With Making an impact are both highly distinct and threatened. mentorship from ZSL experts, and a grant to set in the field Distinct and Globally Endangered animals, we celebrate 10 The resulting EDGE species are unique up their own project on an EDGE species, each 3 highlights from its extraordinary work animals on the verge of extinction – the Fellow gains a rigorous scientific grounding Over the past decade, nearly 70 truly weird and wonderful. -
Multi-National Conservation of Alligator Lizards
MULTI-NATIONAL CONSERVATION OF ALLIGATOR LIZARDS: APPLIED SOCIOECOLOGICAL LESSONS FROM A FLAGSHIP GROUP by ADAM G. CLAUSE (Under the Direction of John Maerz) ABSTRACT The Anthropocene is defined by unprecedented human influence on the biosphere. Integrative conservation recognizes this inextricable coupling of human and natural systems, and mobilizes multiple epistemologies to seek equitable, enduring solutions to complex socioecological issues. Although a central motivation of global conservation practice is to protect at-risk species, such organisms may be the subject of competing social perspectives that can impede robust interventions. Furthermore, imperiled species are often chronically understudied, which prevents the immediate application of data-driven quantitative modeling approaches in conservation decision making. Instead, real-world management goals are regularly prioritized on the basis of expert opinion. Here, I explore how an organismal natural history perspective, when grounded in a critique of established human judgements, can help resolve socioecological conflicts and contextualize perceived threats related to threatened species conservation and policy development. To achieve this, I leverage a multi-national system anchored by a diverse, enigmatic, and often endangered New World clade: alligator lizards. Using a threat analysis and status assessment, I show that one recent petition to list a California alligator lizard, Elgaria panamintina, under the US Endangered Species Act often contradicts the best available science. -
2008 Amphibian Distribution Surveys in Wadeable Streams and Ponds in Western and Southeast Oregon
INFORMATION REPORTS NUMBER 2010-05 FISH DIVISION Oregon Department of Fish and Wildlife 2008 Amphibian Distribution Surveys in Wadeable Streams and Ponds in Western and Southeast Oregon Oregon Department of Fish and Wildlife prohibits discrimination in all of its programs and services on the basis of race, color, national origin, age, sex or disability. If you believe that you have been discriminated against as described above in any program, activity, or facility, or if you desire further information, please contact ADA Coordinator, Oregon Department of Fish and Wildlife, 3406 Cherry Drive NE, Salem, OR, 503-947-6000. This material will be furnished in alternate format for people with disabilities if needed. Please call 541-757-4263 to request 2008 Amphibian Distribution Surveys in Wadeable Streams and Ponds in Western and Southeast Oregon Sharon E. Tippery Brian L. Bangs Kim K. Jones Oregon Department of Fish and Wildlife Corvallis, OR November, 2010 This project was financed with funds administered by the U.S. Fish and Wildlife Service State Wildlife Grants under contract T-17-1 and the Oregon Department of Fish and Wildlife, Oregon Plan for Salmon and Watersheds. Citation: Tippery, S. E., B. L Bangs and K. K. Jones. 2010. 2008 Amphibian Distribution Surveys in Wadeable Streams and Ponds in Western and Southeast Oregon. Information Report 2010-05, Oregon Department of Fish and Wildlife, Corvallis. CONTENTS FIGURES....................................................................................................................................... -
Amphibiaweb's Illustrated Amphibians of the Earth
AmphibiaWeb's Illustrated Amphibians of the Earth Created and Illustrated by the 2020-2021 AmphibiaWeb URAP Team: Alice Drozd, Arjun Mehta, Ash Reining, Kira Wiesinger, and Ann T. Chang This introduction to amphibians was written by University of California, Berkeley AmphibiaWeb Undergraduate Research Apprentices for people who love amphibians. Thank you to the many AmphibiaWeb apprentices over the last 21 years for their efforts. Edited by members of the AmphibiaWeb Steering Committee CC BY-NC-SA 2 Dedicated in loving memory of David B. Wake Founding Director of AmphibiaWeb (8 June 1936 - 29 April 2021) Dave Wake was a dedicated amphibian biologist who mentored and educated countless people. With the launch of AmphibiaWeb in 2000, Dave sought to bring the conservation science and basic fact-based biology of all amphibians to a single place where everyone could access the information freely. Until his last day, David remained a tirelessly dedicated scientist and ally of the amphibians of the world. 3 Table of Contents What are Amphibians? Their Characteristics ...................................................................................... 7 Orders of Amphibians.................................................................................... 7 Where are Amphibians? Where are Amphibians? ............................................................................... 9 What are Bioregions? ..................................................................................10 Conservation of Amphibians Why Save Amphibians? .............................................................................