Western Tiger Salamander,Ambystoma Mavortium
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Identification of Mutant Genes and Introgressed Tiger Salamander
www.nature.com/scientificreports OPEN Identification of Mutant Genes and Introgressed Tiger Salamander DNA in the Laboratory Axolotl, Received: 13 October 2016 Accepted: 19 December 2016 Ambystoma mexicanum Published: xx xx xxxx M. Ryan Woodcock1, Jennifer Vaughn-Wolfe1, Alexandra Elias2, D. Kevin Kump1, Katharina Denise Kendall1,5, Nataliya Timoshevskaya1, Vladimir Timoshevskiy1, Dustin W. Perry3, Jeramiah J. Smith1, Jessica E. Spiewak4, David M. Parichy4,6 & S. Randal Voss1 The molecular genetic toolkit of the Mexican axolotl, a classic model organism, has matured to the point where it is now possible to identify genes for mutant phenotypes. We used a positional cloning– candidate gene approach to identify molecular bases for two historic axolotl pigment phenotypes: white and albino. White (d/d) mutants have defects in pigment cell morphogenesis and differentiation, whereas albino (a/a) mutants lack melanin. We identified in white mutants a transcriptional defect in endothelin 3 (edn3), encoding a peptide factor that promotes pigment cell migration and differentiation in other vertebrates. Transgenic restoration of Edn3 expression rescued the homozygous white mutant phenotype. We mapped the albino locus to tyrosinase (tyr) and identified polymorphisms shared between the albino allele (tyra) and tyr alleles in a Minnesota population of tiger salamanders from which the albino trait was introgressed. tyra has a 142 bp deletion and similar engineered alleles recapitulated the albino phenotype. Finally, we show that historical introgression of tyra significantly altered genomic composition of the laboratory axolotl, yielding a distinct, hybrid strain of ambystomatid salamander. Our results demonstrate the feasibility of identifying genes for traits in the laboratory Mexican axolotl. The Mexican axolotl (Ambystoma mexicanum) is the primary salamander model in biological research. -
Species Concepts and the Evolutionary Paradigm in Modern Nematology
JOURNAL OF NEMATOLOGY VOLUME 30 MARCH 1998 NUMBER 1 Journal of Nematology 30 (1) :1-21. 1998. © The Society of Nematologists 1998. Species Concepts and the Evolutionary Paradigm in Modern Nematology BYRON J. ADAMS 1 Abstract: Given the task of recovering and representing evolutionary history, nematode taxonomists can choose from among several species concepts. All species concepts have theoretical and (or) opera- tional inconsistencies that can result in failure to accurately recover and represent species. This failure not only obfuscates nematode taxonomy but hinders other research programs in hematology that are dependent upon a phylogenetically correct taxonomy, such as biodiversity, biogeography, cospeciation, coevolution, and adaptation. Three types of systematic errors inherent in different species concepts and their potential effects on these research programs are presented. These errors include overestimating and underestimating the number of species (type I and II error, respectively) and misrepresenting their phylogenetic relationships (type III error). For research programs in hematology that utilize recovered evolutionary history, type II and III errors are the most serious. Linnean, biological, evolutionary, and phylogenefic species concepts are evaluated based on their sensitivity to systematic error. Linnean and biologica[ species concepts are more prone to serious systematic error than evolutionary or phylogenetic concepts. As an alternative to the current paradigm, an amalgamation of evolutionary and phylogenetic species concepts is advocated, along with a set of discovery operations designed to minimize the risk of making systematic errors. Examples of these operations are applied to species and isolates of Heterorhab- ditis. Key words: adaptation, biodiversity, biogeography, coevolufion, comparative method, cospeciation, evolution, nematode, philosophy, species concepts, systematics, taxonomy. -
California Tiger Salamander (Ambystoma Californiense)
PETITION TO THE STATE OF CALIFORNIA FISH AND GAME COMMISSION SUPPORTING INFORMATION FOR The California Tiger Salamander (Ambystoma californiense) TABLE OF CONTENTS EXECUTIVE SUMMARY.................................................................................................................1 PROCEDURAL HISTORY ................................................................................................................2 THE CESA LISTING PROCESS AND THE STANDARD FOR ACCEPTANCE OF A PETITION ...5 DESCRIPTION, BIOLOGY, AND ECOLOGY OF THE CALIFORNIA TIGER SALAMANDER ....6 I. DESCRIPTION ...............................................................................................................................6 II. TAXONOMY .................................................................................................................................7 III. REPRODUCTION AND GROWTH .....................................................................................................7 IV. MOVEMENT.................................................................................................................................9 V. FEEDING ....................................................................................................................................10 VI. POPULATION GENETICS .............................................................................................................10 HABITAT REQUIREMENTS..........................................................................................................12 DISTRIBUTION -
Sonora Tiger Salamander
PETITION TO LIST THE HUACHUCA TIGER SALAMANDER Ambystoma tigrinum stebbinsi AS A FEDERALLY ENDANGERED SPECIES Mr. Bruce Babbitt Secretary of the Interior Office of the Secretary Department of the Interior 18th and "C" Street, N.W. Washington, D.C. 20240 Kieran Suckling, the Greater Gila Biodiversity Project, the Southwest Center For Biological Diversity, and the Biodiversity Legal Foundation, hereby formally petition to list the Huachuca Tiger Salamander (Ambystoma tigrinum stebbinsi) as endangered pursuant to the Endangered Species Act, 16 U.S.C. 1531 et seg. (hereafter referred to as "ESA"). This petition is filed under 5 U.S.C. 553(e) and 50 CFR 424.14 (1990), which grants interested parties the right to petition for issue of a rule from the Assistant Secretary of the Interior. Petitioners also request that Critical Habitat be designated concurrent with the listing, pursuant to 50 CFR 424.12, and pursuant to the Administrative Procedures Act (5 U.S.C. 553). Petitioners understand that this petition action sets in motion a specific process placing definite response requirements on the U.S. Fish and Wildlife Service and very specific time constraints upon those responses. Petitioners Kieran Suckling is a Doctoral Candidate, endangered species field researcher, and conservationist. He serves as the Director of the Greater Gila Biodiversity Project and has extensively studied the status and natural history of the Huachuca Tiger Salamander. The Greater Gila Biodiversity Project is a non-profit public interest organization created to protect imperiled species and habitats within the Greater Gila Ecosystem of southwest New Mexico and eastern Arizona. Through public education, Endangered Species Act petitions, appeals and litigation, it seeks to restore and protect the integrity of the Greater Gila Ecosystem. -
Loggerhead Shrike, Migrans Subspecies (Lanius Ludovicianus Migrans), in Canada
PROPOSED Species at Risk Act Recovery Strategy Series Recovery Strategy for the Loggerhead Shrike, migrans subspecies (Lanius ludovicianus migrans), in Canada Loggerhead Shrike, migrans subspecies © Manitoba Conservation 2010 About the Species at Risk Act Recovery Strategy Series What is the Species at Risk Act (SARA)? SARA is the Act developed by the federal government as a key contribution to the common national effort to protect and conserve species at risk in Canada. SARA came into force in 2003, and one of its purposes is “to provide for the recovery of wildlife species that are extirpated, endangered or threatened as a result of human activity.” What is recovery? In the context of species at risk conservation, recovery is the process by which the decline of an endangered, threatened or extirpated species is arrested or reversed, and threats are removed or reduced to improve the likelihood of the species’ persistence in the wild. A species will be considered recovered when its long-term persistence in the wild has been secured. What is a recovery strategy? A recovery strategy is a planning document that identifies what needs to be done to arrest or reverse the decline of a species. It sets objectives and broad strategies to attain them and identifies the main areas of activities to be undertaken. Detailed planning is done at the action plan stage. Recovery strategy development is a commitment of all provinces and territories and of three federal agencies — Environment Canada, Parks Canada Agency and Fisheries and Oceans Canada — under the Accord for the Protection of Species at Risk. -
Rinehart Lake
Rinehart Lake Final Results Portage County Lake Study University of Wisconsin-Stevens Point Portage County Staff and Citizens April 5, 2005 What can you learn from this study? You can learn a wealth of valuable information about: • Critical habitat that fish, wildlife, and plants depend on • Water quality and quantity of your lake • The current diagnosis of your lake – good news and bad news What can you DO in your community? You can share this information with the other people who care about your lake and then plan together for the future. 9 Develop consensus about the local goals and objectives for your lake. 9 Identify available resources (people, expertise, time, funding). 9 Explore and choose implementation tools to achieve your goals. 9 Develop an action plan to achieve your lake goals. 9 Implement your plan. 9 Evaluate the results and then revise your goals and plans. 1 Portage County Lake Study – Final Results April 2005 2 Portage County Lake Study – Final Results April 2005 Rinehart Lake ~ Location Rinehart Lake Between County Road Q and T, North of the Town of New Hope Surface Area: 42 Maximum Depth: 27 feet Lake Volume: 744 Water Flow • Rinehart lake is a groundwater drainage lake • Water enters the lake primarily from groundwater, with Outlet some runoff, and precipitation • Water exits the lake to groundwater and to an outlet stream that flows only during peak runoff periods or during high groundwater levels. • The fluctuation of the groundwater table significantly impacts the water levels in Rhinehart Lake 3 Portage County Lake Study – Final Results April 2005 Rinehart Lake ~ Land Use in the Surface Watershed Surface Watershed: The land area where water runs off the surface of the land and drains toward the lake Cty Hwy T Hotvedt Rd. -
Successful Reproduction of the Mole Salamander Ambystoma Talpoideum in Captivity, with an Emphasis on Stimuli Environmental Determinants
SHORT NOTE The Herpetological Bulletin 141, 2017: 28-31 Successful reproduction of the mole salamander Ambystoma talpoideum in captivity, with an emphasis on stimuli environmental determinants AXEL HERNANDEZ Department of Environmental Sciences, Faculty of Sciences and Technics, University Pasquale Paoli of Corsica, Corte, 20250, France Author Email: [email protected] ABSTRACT - Generating and promoting evidence-based husbandry protocols for urodeles, commonly known as newts and salamanders, is urgently needed because most of the up-to-date ex situ programs are focused on frogs and toads than Urodela. Data on biology, life history, ecology and environmental parameters are lacking for many species and are needed to establish suitable husbandry and breeding conditions in captive environments. Two adult females and two adult males, of the mole salamander Ambystoma talpoideum successfully reproduced in captivity. It was found that reproduction of this species depends on various complex stimuli: including natural photoperiod 12:12, rainwater (acidic to neutral pH) and an aquarium full of various debris. Additionally high temperature variations ranging from 2 °C to 17 °C (a decrease followed by an increase) between November and February showed that it is possible to breed adults in aquariums provided the right stimuli are applied at the right moment of time in winter. A. talpoideum shows an explosive breeding mode as previously reported for the whole genus Ambystoma. INTRODUCTION with an emphasis on the environmental determinant stimuli involved. These data may assist in improving breeding these ince the 1980s, the current global amphibian extinction salamanders under artificial conditions. crisis has been discussed and acknowledged (Wake, A. -
AMPHIBIANS of OHIO F I E L D G U I D E DIVISION of WILDLIFE INTRODUCTION
AMPHIBIANS OF OHIO f i e l d g u i d e DIVISION OF WILDLIFE INTRODUCTION Amphibians are typically shy, secre- Unlike reptiles, their skin is not scaly. Amphibian eggs must remain moist if tive animals. While a few amphibians Nor do they have claws on their toes. they are to hatch. The eggs do not have are relatively large, most are small, deli- Most amphibians prefer to come out at shells but rather are covered with a jelly- cately attractive, and brightly colored. night. like substance. Amphibians lay eggs sin- That some of these more vulnerable spe- gly, in masses, or in strings in the water The young undergo what is known cies survive at all is cause for wonder. or in some other moist place. as metamorphosis. They pass through Nearly 200 million years ago, amphib- a larval, usually aquatic, stage before As with all Ohio wildlife, the only ians were the first creatures to emerge drastically changing form and becoming real threat to their continued existence from the seas to begin life on land. The adults. is habitat degradation and destruction. term amphibian comes from the Greek Only by conserving suitable habitat to- Ohio is fortunate in having many spe- amphi, which means dual, and bios, day will we enable future generations to cies of amphibians. Although generally meaning life. While it is true that many study and enjoy Ohio’s amphibians. inconspicuous most of the year, during amphibians live a double life — spend- the breeding season, especially follow- ing part of their lives in water and the ing a warm, early spring rain, amphib- rest on land — some never go into the ians appear in great numbers seemingly water and others never leave it. -
Abundance, Distribution, Population Structure, and Substrate Use of Ambystoma Altamirani Along the Arroyo Los Axolotes, State of Mexico, Mexico
Herpetological Conservation and Biology 15(1):188–197. Submitted: 16 August 2019; Accepted: 23 February 2020; Published: 30 April 2020. ABUNDANCE, DISTRIBUTION, POPULATION STRUCTURE, AND SUBSTRATE USE OF AMBYSTOMA ALTAMIRANI ALONG THE ARROYO LOS AXOLOTES, STATE OF MEXICO, MEXICO VIRIDIANA VILLARREAL HERNÁNDEZ1, GEOFFREY R. SMITH2, RAYMUNDO MONTOYA AYALA3, AND JULIO A. LEMOS-ESPINAL1,4 1Laboratorio de Ecología - Unidad de Biotecnología y Prototipos, Facultad de Estudios Superiores Iztacala, Avendina Los Barrios 1, Los Reyes Iztacala, Tlalnepantla, Estado de México, 54090, México 2Department of Biology, Denison University, Granville, Ohio 43023, USA 3Laboratorio de Cómputo - Unidad de Biotecnología y Prototipos, Facultad de Estudios Superiores Iztacala, Avenida Los Barrios 1, Los Reyes Iztacala, Tlalnepantla, Estado de México, 54090, México 4Corresponding author: e-mail: [email protected] Abstract.—Ambystomatid salamanders in central Mexico are confronted by anthropogenic threats that can limit their distribution and abundance. Ambystoma altamirani (Mountain Stream Siredon) is listed as Endangered by the International Union for Conservation of Nature (IUCN) Red List and as Threatened by the Mexican government. We report on the distribution, abundance, occupancy, population structure, and substrate use of A. altamirani, a stream dwelling salamander, along the Arroyo los Axolotes, Sierra de las Cruces, Mexico. We observed A. altamirani at least once during repeated surveys between February 2018 to December 2018 in 24 of 25 permanent 5-m long reaches separated by 40 m. The best model for occupancy had constant occupancy, detection, extinction, and colonization probabilities. Sites that dried at some time during the study had fewer observed individuals than those that did not dry. Size structure was relatively constant throughout the year, except for the appearance of small larvae in May, June, and July. -
AMPHIBIA: CAUDATA: AMBYSTOMATIDAE Catalogue Of
75.1 AMPHIBIA: CAUDATA: AMBYSTOMATIDAE AMBYSTOMA Catalogue of American Amphibians and Reptiles. Acholotes: Cope, 1867:184. An incorrect subsequent spelling ofAxolotes Owen, 1844; without nomenclatural status. TIHEN,JOSEPHA. 1969. Ambystoma. Pectoglossa Mivart, 1867:698. Type-species Plethodon persimi· lis Gray, 1859 (= Salamandra jeffersoniana Green, 1827), by monotypy. A.mbystoma Salamandroides: Boulenger, 1882:38. An incorrect subsequent Mole salamanders spelling of Salamandroidis Fitzinger, 1843; without no· menclatural status. Axolotus Jarocki, 1822:179. Type-species Siren pisciformis Linguaelapsus Cope, 1887:88. Type-species Amblystoma annu• Shaw, 1802 (= Gyrinus mexicanus Shaw, 1789), by sub• latum Cope, 1886, by subsequent designation (Dunn and sequent designation (Smith and Tihen, 1961b). See No• Dunn, 1940). menclatural History. Plioambystoma Adams and Martin, 1929:17. Type-species Philhydrus Brookes, 1828:16. Type-species Siren pisciformis Plioambystoma kansense Adams and Martin, 1929, by Shaw, 1802 (= Gyrinus mexicanus Shaw, 1789), by mono• monotypy. typy. See Nomenclatural History. Bathysiredon Dunn, 1939:1. Type-species Siredon dumerilii Siredon Wagler, 1830:209, 210. Type-species Siredon axolotl Duges, 1870, by original designation. Wagler, 1830 (= Gyrinus mexicanus Shaw, 1789), by Lanebatrachus Taylor, 1941:180. Type-species Lanebatrachus monotypy. See Nomenclatural History. martini Taylor, 1941 (= Plioambystoma kansense Adams Phyllhydrus Gray, 1831:108. Type-species Siren pisciformis and Martin, 1929), by original designation. Shaw,1802 (= Gyrinus mexicanus Shaw, 1789), by mono• Ogallalabatrachus Taylor, 1941 :181. Type-species Ogallala• typy (although Gray suggested other species as possibly batrachus horarium Taylor, 1941 (= Plioambystoma kan• referable to this genus). See Nomenclatural History. sense Adams and Martin, 1929), by original designation. Axolot Bonaparte, 1831:77. Type-species Siren pisciformis Shaw, 1802 (= Gyrinus mexicanus Shaw, 1789), by im• • CONTENT. -
Towards a Global Names Architecture: the Future of Indexing Scientific Names
A peer-reviewed open-access journal ZooKeys 550: 261–281Towards (2016) a Global Names Architecture: The future of indexing scientific names 261 doi: 10.3897/zookeys.550.10009 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Towards a Global Names Architecture: The future of indexing scientific names Richard L. Pyle1 1 Bernice Pauahi Bishop Museum, 1525 Bernice Street, Honolulu, HI 96817, USA Corresponding author: Richard L. Pyle (email address) Academic editor: Ellinor Michel | Received 19 May 2015 | Accepted 20 May 2015 | Published 7 January 2016 http://zoobank.org/AD5B8CE2-BCFC-4ABC-8AB0-C92DEC7D4D85 Citation: Pyle RL (2016) Towards a Global Names Architecture: The future of indexing scientific names. In: Michel E (Ed.) Anchoring Biodiversity Information: From Sherborn to the 21st century and beyond. ZooKeys 550: 261–281. doi: 10.3897/zookeys.550.10009 Abstract For more than 250 years, the taxonomic enterprise has remained almost unchanged. Certainly, the tools of the trade have improved: months-long journeys aboard sailing ships have been reduced to hours aboard jet airplanes; advanced technology allows humans to access environments that were once utterly inacces- sible; GPS has replaced crude maps; digital hi-resolution imagery provides far more accurate renderings of organisms that even the best commissioned artists of a century ago; and primitive candle-lit micro- scopes have been replaced by an array of technologies ranging from scanning electron microscopy to DNA sequencing. But the basic paradigm remains the same. Perhaps the most revolutionary change of all – which we are still in the midst of, and which has not yet been fully realized – is the means by which taxonomists manage and communicate the information of their trade. -
Recovery Strategy for the Pacific Giant Salamander (Dicamptodon Tenebrosus) in British Columbia
British Columbia Recovery Strategy Series Recovery Strategy for the Pacific Giant Salamander (Dicamptodon tenebrosus) in British Columbia Prepared by the Pacific Giant Salamander Recovery Team April 2010 About the British Columbia Recovery Strategy Series This series presents the recovery strategies that are prepared as advice to the Province of British Columbia on the general strategic approach required to recover species at risk. The Province prepares recovery strategies to meet its commitments to recover species at risk under the Accord for the Protection of Species at Risk in Canada, and the Canada – British Columbia Agreement on Species at Risk. What is recovery? Species at risk recovery is the process by which the decline of an endangered, threatened, or extirpated species is arrested or reversed, and threats are removed or reduced to improve the likelihood of a species’ persistence in the wild. What is a recovery strategy? A recovery strategy represents the best available scientific knowledge on what is required to achieve recovery of a species or ecosystem. A recovery strategy outlines what is and what is not known about a species or ecosystem; it also identifies threats to the species or ecosystem, and what should be done to mitigate those threats. Recovery strategies set recovery goals and objectives, and recommend approaches to recover the species or ecosystem. Recovery strategies are usually prepared by a recovery team with members from agencies responsible for the management of the species or ecosystem, experts from other agencies, universities, conservation groups, aboriginal groups, and stakeholder groups as appropriate. What’s next? In most cases, one or more action plan(s) will be developed to define and guide implementation of the recovery strategy.