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												  UC San Diego Electronic Theses and DissertationsUC San Diego UC San Diego Electronic Theses and Dissertations Title Vanadium-dependent bromoperoxidase in a marine Synechococcus / Permalink https://escholarship.org/uc/item/34x4t8rp Author Johnson, Todd Laurel Publication Date 2013 Peer reviewed|Thesis/dissertation eScholarship.org Powered by the California Digital Library University of California UNIVERSITY OF CALIFORNIA, SAN DIEGO Vanadium-dependent bromoperoxidase in a marine Synechococcus A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Marine Biology by Todd L. Johnson Committee in charge: Brian Palenik, Chair Bianca Brahamsha, Co-Chair Lihini Aluwihare James Golden Jens Mühle Bradley Moore 2013 Copyright Todd L. Johnson, 2013 All rights reserved. The dissertation of Todd L. Johnson is approved, and it is acceptable in quality and form for publication on microfilm and electronically: ________________________________________________________ ________________________________________________________ ________________________________________________________ ________________________________________________________ ________________________________________________________ Co-Chair ________________________________________________________ Chair University of California, San Diego 2013 iii DEDICATION To Janet, Tim, and Andrew Johnson, for unconditional love and support. iv TABLE OF CONTENTS Signature Page……………………………………………………………………………iii Dedication ………………………………………………………………………………..iv Table of Contents………………………………………………………………………….v List
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												  Downloaded from GenbankMethylotrophs and Methylotroph Populations for Chloromethane Degradation Françoise Bringel1*, Ludovic Besaury2, Pierre Amato3, Eileen Kröber4, Stefen Kolb4, Frank Keppler5,6, Stéphane Vuilleumier1 and Thierry Nadalig1 1Université de Strasbourg UMR 7156 UNISTR CNRS, Molecular Genetics, Genomics, Microbiology (GMGM), Strasbourg, France. 2Université de Reims Champagne-Ardenne, Chaire AFERE, INR, FARE UMR A614, Reims, France. 3 Université Clermont Auvergne, CNRS, SIGMA Clermont, ICCF, Clermont-Ferrand, France. 4Microbial Biogeochemistry, Research Area Landscape Functioning – Leibniz Centre for Agricultural Landscape Research – ZALF, Müncheberg, Germany. 5Institute of Earth Sciences, Heidelberg University, Heidelberg, Germany. 6Heidelberg Center for the Environment HCE, Heidelberg University, Heidelberg, Germany. *Correspondence: [email protected] htps://doi.org/10.21775/cimb.033.149 Abstract characterized ‘chloromethane utilization’ (cmu) Chloromethane is a halogenated volatile organic pathway, so far. Tis pathway may not be representa- compound, produced in large quantities by terres- tive of chloromethane-utilizing populations in the trial vegetation. Afer its release to the troposphere environment as cmu genes are rare in metagenomes. and transport to the stratosphere, its photolysis con- Recently, combined ‘omics’ biological approaches tributes to the degradation of stratospheric ozone. A with chloromethane carbon and hydrogen stable beter knowledge of chloromethane sources (pro- isotope fractionation measurements in microcosms, duction) and sinks (degradation) is a prerequisite indicated that microorganisms in soils and the phyl- to estimate its atmospheric budget in the context of losphere (plant aerial parts) represent major sinks global warming. Te degradation of chloromethane of chloromethane in contrast to more recently by methylotrophic communities in terrestrial envi- recognized microbe-inhabited environments, such ronments is a major underestimated chloromethane as clouds.
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												  Download (1364Kb)Short-Lived Trace Gases in the Surface Ocean and the Atmosphere 1 Peter S. Liss, Christa A. Marandino, Elizabeth E. Dahl, Detlev Helmig, Eric J. Hintsa, Claire Hughes, Martin T. Johnson, Robert M. Moore, John M.C. Plane, Birgit Quack, Hanwant B. Singh, Jacqueline Stefels, Roland von Glasow, and Jonathan Williams Abstract The two-way exchange of trace gases between the ocean and the atmosphere is important for both the chemistry and physics of the atmosphere and the biogeochemistry of the oceans, including the global cycling of elements. Here we review these exchanges and their importance for a range of gases whose lifetimes are generally short compared to the main greenhouse gases and which are, in most cases, more reactive than them. Gases considered include sulphur and related compounds, organohalogens, non-methane hydrocarbons, ozone, ammonia and related compounds, hydrogen and carbon monoxide. Finally, we stress the interactivity of the system, the importance of process understanding for modeling, the need for more extensive field measurements and their better seasonal coverage, the importance of inter-calibration exercises and finally the need to show the importance of air-sea exchanges for global cycling and how the field fits into the broader context of Earth System Science. 1.1 Introduction trace gas cycling between the oceanic and atmospheric reservoirs. Despite their seemingly low abundances, short-lived In this chapter we present current knowledge on trace gases in the atmosphere critically influence surface ocean cycling processes, atmospheric reactivity global climate change, stratospheric ozone chemistry, and importance, and the influence of air-sea exchange and the oxidative capacity of the atmosphere.
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											Ambient Water Quality Criteria for Halomethanes AMBIENT WATER QUALITY CRITERIA FORUnited States Office of Water EPA 440 5-80-051 Environmental Protection Regulations and Standards October 1980 Agency Criteria and Standards Division Washington DC 20460 EPA Ambient Water Quality Criteria for Halomethanes AMBIENT WATER QUALITY CRITERIA FOR HALOMETHANES Prepared By U.S. ENVIRONMENTAL PROTECTION AGENCY Office of Water Regulations and Standards Criteria and Standards Division Washington, D.C. Office of Research and Development Environmental Criteria and Assessment Office Cincinnati, Ohio Carcinogen Assessment Group Washington, D.C. Environmental Research Laboratories Corvalis, Oregon Duluth, Minnesota Gulf Breeze, Florida Narragansett, Rhode Island i DISCLAIMER This report has been reviewed by the Environmental Criteria and Assessment Office, U.S. Environmental Protection Agency, and approved for publication. Mention of trade names or commercial products does not constitute endorsement or recommendation for use. AVAILABILITY NOTICE This document is available to the public through the National Technical Information Service, (NTIS), Springfield, Virginia 22161. ii FOREWORD Section 304 (a)(1) of the Clean Water Act of 1977 (P.L. 95-217), requires the Administrator of the Environmental Protection Agency to publish criteria for water quality accurately reflecting the latest scientific knowledge on the kind and extent of all identifiable effects on health and welfare which may be expected from the presence of pollutants in any body of water, including ground water. Proposed water quality criteria for the 65 toxic pollutants listed under section 307 (a)(1) of the Clean Water Act were developed and a notice of their availability was published for public comment on March 15, 1979 (44 FR 15926), July 25, 1979 (44 FR 43660), and October 1, 1979 (44 FR 56628).
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												  Emissions of Volatile Halogenated Compounds from a Meadow in a Coastal Area of the Baltic SeaBoreal environment research 14: 915–931 © 2009 issn 1239-6095 (print) issn 1797-2469 (online) helsinki 18 December 2009 emissions of volatile halogenated compounds from a meadow in a coastal area of the Baltic sea arja valtanen1)2), stephan solloch1), helinä hartikainen2) and Walter michaelis1) 1) Institute of Biogeochemistry and Marine Chemistry, University of Hamburg, Bundesstraße 55, D-20146 Hamburg, Germany 2) Department of Applied Chemistry and Microbiology, P.O. Box 27, FI-00014 University of Helsinki, Finland Received 7 Oct. 2008, accepted 2 Feb. 2009 (Editor in charge of this article: Veli-Matti Kerminen) valtanen, a., solloch, s., hartikainen h. & michaelis, W. 2009: emissions of volatile halogenated com- pounds from a meadow in a coastal area of the Baltic sea. Boreal Env. Res. 14: 915–931. Chlorine radicals are well-known catalysts in the ozone depletion reactions. This study was undertaken to monitor emissions of chloromethane (CH3Cl), an important source of chlo- rine to the troposphere and stratosphere, from a boreal coastal meadow on the shoreline of brackish-water sea. We sampled volatile organic compounds in the atmosphere above two halophytic vegetation types on three days in July 2007, overall 22 measurements were con- ducted. Two experimental sites were dominated by Salicornia europaea and two sites were covered by mixed vegetation. A variety of substances of anthropogenic and natural origin were identified, the biogenic organic compounds predominating. The vegetation types did not differ markedly in their CH3Cl flux rates, the daily flux from S. europaea being 10.97 µg m–2 d–1 and that from the mixed vegetation 9.92 µg m–2 d–1.
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												  Organic Chemistry Self Instructional Package 2: MethaneDOCUMENT RESUME ED 135 582 SE 021 573 AUTHOR Zdravkovich, V. TITLE Organic Chemistry Self Instructional Package 2: Methane. INSTITUTION Prince George's Community Coll., largo, Md. PUB DATE 76 NOTE 58p.; For related Packages 1-17, see SE 021 572-588; Not available in hard copy due to copyright restrictions AVAILABLE FROM Prince George's Community College Bookstore, Largo, Maryland 20870 ($17.00 a set, $1.00 ea.) EDRS PRICE MF-$0.83 Plus Postage. HC Not Available from EDRS. DESCRIPTORS *Autoinstructional Aids; *Chemistry; *College Science; Higher Education; *Independent Study; Individualized Instruction; Individualized Programs; *Organic Chemistry; Science Educaticn; Self Help Programs IDENTIFIERS *Methane; Prince Georges Community College ABSTRACT This booklet, one of a series of 17 developed at Prince George's Community College, Largo, Maryland, provides an individualized, self-paced undergraduate organic chemistry instruction module designed to augment any course in organic chemistry but farticularly those taught using the text "Organic Chemistry" by Morrison and Boyd. The entire series of modules covers the first 13 chapters of the Morrison-Boyd text in great detail. Each module has been provided with from one to three audiotapes, available from Prince George's Community College, to provide students additional explanations of particular concepts. Each module includes a self-evaluation exercise, a reference guide, worksheets to be completed with the audiotapes, answer sheets for the worksheets, a progress evaluation, an answer sheet for the progress evaluation, an answer sheet for the self-evaluation exercise, an introduction to the topic covered by the module, and student performance objectives for the module. The topic of this module is methane.
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												  8. ORGANIC COMPOUNDS Organic Chemistry Is the Chemistry of The8. ORGANIC COMPOUNDS Organic chemistry is the chemistry of the compounds of carbon. The name “organic” is a relic of the days when chemical compounds were divided into two classes, inorganic and organic, depending on their origin. Inorganics came from minerals; organics came from material produced by living matter. Originally, it was thought that organic compounds could only come from living matter, but today many organics are synthesized. Two major reservoirs of organic matter for synthesis are petroleum and coal. The focus of these notes is to provide a basis for understanding contaminant distribution and movement in the natural environment. There are a plethora of synthetic organic compounds currently being produced and discarded. These are highly varied in properties and reactivities. The approach used in this course, based on the approach used in Schwarzenbach et al.(1993), is that understanding the chemical structure of organic molecules will provide a basis for predicting their behavior. 8.1 The Fundamentals Elemental Composition-Molecular and structural formula First we need to look at the atoms comprising organic compounds and the chemical bonds linking them. Organic molecules consist of a relatively small set of atoms: carbon (C), hydrogen (H), oxygen (O), nitrogen (N), sulfur (S), phosphorus (P) and halogens [iodine (I), chlorine (Cl), bromine (Br) and fluorine (F)]. Carbon can form stable C-C bonds, basically forming a carbon skeleton for organic molecules. Other atoms can substitute into this structure, allowing an almost infinite amount of stable organic structures to be synthesized. To specify organic molecules, we need elemental composition and the molecular formula.
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												  UNIVERSITY of CALIFORNIA, SAN DIEGO Vanadium-DependentUNIVERSITY OF CALIFORNIA, SAN DIEGO Vanadium-dependent bromoperoxidase in a marine Synechococcus A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Marine Biology by Todd L. Johnson Committee in charge: Brian Palenik, Chair Bianca Brahamsha, Co-Chair Lihini Aluwihare James Golden Jens Mühle Bradley Moore 2013 Copyright Todd L. Johnson, 2013 All rights reserved. The dissertation of Todd L. Johnson is approved, and it is acceptable in quality and form for publication on microfilm and electronically: ________________________________________________________ ________________________________________________________ ________________________________________________________ ________________________________________________________ ________________________________________________________ Co-Chair ________________________________________________________ Chair University of California, San Diego 2013 iii DEDICATION To Janet, Tim, and Andrew Johnson, for unconditional love and support. iv TABLE OF CONTENTS Signature Page……………………………………………………………………………iii Dedication ………………………………………………………………………………..iv Table of Contents………………………………………………………………………….v List of Abbreviations………………………………………………………………......…vi List of Figures………………………………………………………………………...…viii List of Tables…………………………………………………………..…………………xi Acknowledgements………………………………………….…………………….……xiii Vita……………………………………………………….………………………...……xiv Abstract…………………....……………………………………………………...…...…xv Chapter 1: Introduction………..………………………………………………….….……1
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												  Supported Catalyst, Preparation Method Therefor(19) TZZ¥Z _T (11) EP 3 056 269 B1 (12) EUROPEAN PATENT SPECIFICATION (45) Date of publication and mention (51) Int Cl.: of the grant of the patent: B01J 27/138 (2006.01) B01J 37/22 (2006.01) 24.04.2019 Bulletin 2019/17 C07C 11/09 (2006.01) C07C 1/26 (2006.01) B01J 29/40 (2006.01) (21) Application number: 14859617.4 (86) International application number: (22) Date of filing: 28.10.2014 PCT/CN2014/089683 (87) International publication number: WO 2015/067133 (14.05.2015 Gazette 2015/19) (54) SUPPORTED CATALYST, PREPARATION METHOD THEREFOR AND USE THEREOF, AND METHOD FOR PREPARATION OF ISOBUTYLENE FROM HALOMETHANE GETRÄGERTER KATALYSATOR, HERSTELLUNGSVERFAHREN DAFÜR UND VERWENDUNG DAVON SOWIE VERFAHREN ZUR HERSTELLUNG VON ISOBUTYLEN AUS HALOMETHAN CATALYSEUR SUPPORTÉ, SON PROCÉDÉ DE PRÉPARATION ET SON UTILISATION, ET PROCÉDÉ DE PRÉPARATION D’ISOBUTYLÈNE À PARTIR D’UN HALOMÉTHANE (84) Designated Contracting States: • ZHANG, Xiwen AL AT BE BG CH CY CZ DE DK EE ES FI FR GB Fushun GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO Liaoning 113001 (CN) PL PT RO RS SE SI SK SM TR • SUN, Xiaodan Fushun (30) Priority: 07.11.2013 CN 201310546339 Liaoning 113001 (CN) • LI, Jie (43) Date of publication of application: Fushun 17.08.2016 Bulletin 2016/33 Liaoning 113001 (CN) • NI, Xiangqian (73) Proprietors: Fushun • China Petroleum & Chemical Corporation Liaoning 113001 (CN) Beijing 100728 (CN) • Fushun Research Institute of Petroleum and (74) Representative: Hoffmann Eitle Petrochemicals, Sinopec Corp. Patent- und Rechtsanwälte PartmbB Fushun, Liaoning 113001
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												  Methyl Halide Production in Fungi Gail DUniversity of New Hampshire University of New Hampshire Scholars' Repository Master's Theses and Capstones Student Scholarship Fall 2007 Methyl halide production in fungi Gail D. Dailey University of New Hampshire, Durham Follow this and additional works at: https://scholars.unh.edu/thesis Recommended Citation Dailey, Gail D., "Methyl halide production in fungi" (2007). Master's Theses and Capstones. 293. https://scholars.unh.edu/thesis/293 This Thesis is brought to you for free and open access by the Student Scholarship at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in Master's Theses and Capstones by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. METHYL HALIDE PRODUCTION IN FUNGI BY Gail D. Dailey THESIS Submitted to the University of New Hampshire in Partial Fulfillm ent of the Requirements for the Degree of Master of Science in Natural Resources September, 2007 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. UMI Number: 1447880 Copyright 2007 by Dailey, Gail D. All rights reserved. INFORMATION TO USERS The quality of this reproduction is dependent upon the quality of the copy submitted. Broken or indistinct print, colored or poor quality illustrations and photographs, print bleed-through, substandard margins, and improper alignment can adversely affect reproduction. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if unauthorized copyright material had to be removed, a note will indicate the deletion. ® UMI UMI Microform 1447880 Copyright 2007 by ProQuest Information and Learning Company.
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												  TR-385: Methyl Bromide (CASRN 74-83-9)NATIONAL TOXICOLOGY PROGRAM Technical Report Series No. 385 TOXICOLOGY AND CARCINOGENESIS STUDIES OF METHYL BROMIDE (CAS NO. 74-83-9) IN B6C3F1 MICE (INHALATION STUDIES) U.S. DEPARTMENT OF HEALTH AND HUMAN SERVICES Public Health Service National Institutes of Health FOREWORD The National Toxicology Program (NTP) is made up of four charter agencies of the U.S. Department of Health and Human Services (DHHS): the National Cancer Institute (NCI), National Institutes of Health; the National Institute of Environmental Health Sciences (NIEHS), National Institutes of Health; the National Center for Toxicological Research (NCTR), Food and Drug Administration; and the National Institute for Occupational Safety and Health (NIOSH), Centers for Disease Control. In July 1981, the Carcinogenesis Bioassay Testing Program, NCI, was transferred to the NIEHS. The NTP coordinates the relevant programs, staff, and resources from these Public Health Service agencies relating to basic and applied research and to biological assay development and validation. The NTP develops, evaluates, and disseminates scientific information about potentially toxic and hazardous chemicals. This knowledge is used for protecting the health of the American people and for the primary prevention of disease. The studies described in this Technical Report were performed under the direction of the NIEHS and were conducted in compliance with NTP laboratory health and safety requirements and must meet or exceed all applicable federal, state, and local health and safety regulations. Animal care and use were in accordance with the Public Health Service Policy on Humane Care and Use of Animals. The prechronic and chronic studies were conducted in compliance with Food and Drug Administration Good Laboratory Practice Regulations and all aspects of the chronic studies were subjected to retrospective quality assurance audits before being presented for public review.
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												  A Global-Scale Map of Isoprene and Volatile Organic Iodine in Surface Seawater of the Arctic, Northwest Pacific, Indian, Title and Southern OceansA global-scale map of isoprene and volatile organic iodine in surface seawater of the Arctic, Northwest Pacific, Indian, Title and Southern Oceans Author(s) Ooki, Atsushi; Nomura, Daiki; Nishino, Shigeto; Kikuchi, Takashi; Yokouchi, Yoko Journal of geophysical research oceans, 120(6), 4108-4128 Citation https://doi.org/10.1002/2014JC010519 Issue Date 2015-06 Doc URL http://hdl.handle.net/2115/60269 Rights Copyright 2015 American Geophysical Union. Type article File Information jgrc21271.pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP PUBLICATIONS Journal of Geophysical Research: Oceans RESEARCH ARTICLE A global-scale map of isoprene and volatile organic iodine in 10.1002/2014JC010519 surface seawater of the Arctic, Northwest Pacific, Indian, and Key Points: Southern Oceans Isoprene and volatile organic iodine were measured in ocean surface Atsushi Ooki1, Daiki Nomura2, Shigeto Nishino3, Takashi Kikuchi3, and Yoko Yokouchi4 water 1 2 High concentrations occur in highly Faculty of Fisheries Sciences, Hokkaido University, Hakodate, Japan, Institute of Low Temperature Science, Hokkaido productive waters University, Sapporo, Japan, 3Institute of Arctic Climate and Environment Research, Japan Agency for Marine-Earth Science CH I sea-to-air flux was dominant in 3 and Technology, Yokosuka, Japan, 4National Institute for Environmental Studies, Tsukuba, Japan basin areas; CH2ClI in shelf-slope areas Abstract Isoprene (C5H8) and three volatile organic iodine compounds (VOIs: CH3I, C2H5I, and CH2ClI) in Supporting Information: surface seawater were measured in the western Arctic, Northwest Pacific, Indian, and Southern Oceans dur- Supporting Information S1 Data Set S1 ing the period 2008–2012. These compounds are believed to play an important role in the marine atmos- pheric chemistry after their emission.