The Rise of Seahorses
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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
A New Pipefish from Queensland
A NEW PIPEFISH FROM QUEENSLAND. By A. FRASER-BRUNNER, F.Z.S., British Museum (Natural History), and G. P. WHITLEY, F.R.Z.S., Curator of Fishes, Australian Museum. (Figures 1-2.) When drawing some types of Australian fishes in the British Museum, the senior author found a specimen of a Queensland Pipefish which did not agree with Gunther's , type (from Suez) of the species (Acentronura tentaculata) with which it had been previously ~ssociated .(Duncker, 1915; McCulloch and Whitley, 1925; Dollfus and Petit, 1938). He prepared a description and figure of the specimen, and sent them to the junior author, who studied the fish in relation to the literature and made taxonomic comparisons with its congeners. The specimen is considered to belong to a new species. Family SYNGNATHIDAE. Genus ACENTRONURA Kaup, 1853. Acentronura breviperula, sp. novo (Figure 1.) Length of head contained 2!! times in head plus trunk. Snout equal to diameter of eye, half as long as postorbital part of head. Tail about 1~ times length of combined head and trunk. Thirteen body rings; 42 tail rings, the first seven of which form the brood-pouch. Dorsal fin on 4!! rings, two of which are caudal. Dorsal rays 16; pectoral 15. Dermal filaments as shown in figure 1; larger filaments generally on each fourth ring. General characters of the genus as defined by the authors Q.uoted in the list of references below, and as figured. Figure l.-Acentronura breviperula Fraser-Brunner and Whitley. Holoty'pe from Mabuiag, Torres Strait, Queensland. A. Fraser-Brunner, del. Described and figured from the holotype, a specimen about 35 mm. -
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AUSTRALIAN MUSEUM SCIENTIFIC PUBLICATIONS Fraser-Brunner, A., and Gilbert P. Whitley, 1949. A new pipefish from Queensland. Records of the Australian Museum 22(2): 148–150. [18 January 1949]. doi:10.3853/j.0067-1975.22.1949.595 ISSN 0067-1975 Published by the Australian Museum, Sydney nature culture discover Australian Museum science is freely accessible online at http://publications.australianmuseum.net.au 6 College Street, Sydney NSW 2010, Australia A NEW PIPEFISH FROM QUEENSLAND. By A. FRASER-BRUNNER, F.Z.S., British Museum (Natural History), and G. P. WHITLEY, F.R.Z.S., Curator of Fishes, Australian Museum. (Figures 1-2.) When drawing some types of Australian fishes in the British Museum, the senior author found a specimen of a Queensland Pipefish which did not agree with Gunther's , type (from Suez) of the species (Acentronura tentaculata) with which it had been previously ~ssociated .(Duncker, 1915; McCulloch and Whitley, 1925; Dollfus and Petit, 1938). He prepared a description and figure of the specimen, and sent them to the junior author, who studied the fish in relation to the literature and made taxonomic comparisons with its congeners. The specimen is considered to belong to a new species. Family SYNGNATHIDAE. Genus ACENTRONURA Kaup, 1853. Acentronura breviperula, sp. novo (Figure 1.) Length of head contained 2!! times in head plus trunk. Snout equal to diameter of eye, half as long as postorbital part of head. Tail about 1~ times length of combined head and trunk. Thirteen body rings; 42 tail rings, the first seven of which form the brood-pouch. Dorsal fin on 4!! rings, two of which are caudal. -
Reproductive Biology of the Opossum Pipefish, Microphis Brachyurus Lineatus, in Tecolutla Estuary, Veracruz, Mexico
Gulf and Caribbean Research Volume 16 Issue 1 January 2004 Reproductive Biology of the Opossum Pipefish, Microphis brachyurus lineatus, in Tecolutla Estuary, Veracruz, Mexico Martha Edith Miranda-Marure Universidad Nacional Autonoma de Mexico Jose Antonio Martinez-Perez Universidad Nacional Autonoma de Mexico Nancy J. Brown-Peterson University of Southern Mississippi, [email protected] Follow this and additional works at: https://aquila.usm.edu/gcr Part of the Marine Biology Commons Recommended Citation Miranda-Marure, M. E., J. A. Martinez-Perez and N. J. Brown-Peterson. 2004. Reproductive Biology of the Opossum Pipefish, Microphis brachyurus lineatus, in Tecolutla Estuary, Veracruz, Mexico. Gulf and Caribbean Research 16 (1): 101-108. Retrieved from https://aquila.usm.edu/gcr/vol16/iss1/17 DOI: https://doi.org/10.18785/gcr.1601.17 This Article is brought to you for free and open access by The Aquila Digital Community. It has been accepted for inclusion in Gulf and Caribbean Research by an authorized editor of The Aquila Digital Community. For more information, please contact [email protected]. Gulf and Caribbean Research Vol 16, 101–108, 2004 Manuscript received September 25, 2003; accepted December 12, 2003 REPRODUCTIVE BIOLOGY OF THE OPOSSUM PIPEFISH, MICROPHIS BRACHYURUS LINEATUS, IN TECOLUTLA ESTUARY, VERACRUZ, MEXICO Martha Edith Miranda-Marure, José Antonio Martínez-Pérez, and Nancy J. Brown-Peterson1 Laboratorio de Zoología, Universidad Nacional Autónoma de México, Facultad de Estudios Superiores Iztacala. Av., de los Barrios No.1, Los Reyes Iztacala, Tlalnepantla, Estado de México, C.P. 05490 Mexico 1Department of Coastal Sciences, The University of Southern Mississippi, 703 East Beach Drive, Ocean Springs, MS 39564 USA ABSTRACT The reproductive biology of the opossum pipefish, Microphis brachyurus lineatus, was investigated in Tecolutla estuary, Veracruz, Mexico, to determine sex ratio, size at maturity, gonadal and brood pouch histology, reproductive seasonality, and fecundity of this little-known syngnathid. -
Order GASTEROSTEIFORMES PEGASIDAE Eurypegasus Draconis
click for previous page 2262 Bony Fishes Order GASTEROSTEIFORMES PEGASIDAE Seamoths (seadragons) by T.W. Pietsch and W.A. Palsson iagnostic characters: Small fishes (to 18 cm total length); body depressed, completely encased in Dfused dermal plates; tail encircled by 8 to 14 laterally articulating, or fused, bony rings. Nasal bones elongate, fused, forming a rostrum; mouth inferior. Gill opening restricted to a small hole on dorsolat- eral surface behind head. Spinous dorsal fin absent; soft dorsal and anal fins each with 5 rays, placed posteriorly on body. Caudal fin with 8 unbranched rays. Pectoral fins large, wing-like, inserted horizon- tally, composed of 9 to 19 unbranched, soft or spinous-soft rays; pectoral-fin rays interconnected by broad, transparent membranes. Pelvic fins thoracic, tentacle-like,withI spine and 2 or 3 unbranched soft rays. Colour: in life highly variable, apparently capable of rapid colour change to match substrata; head and body light to dark brown, olive-brown, reddish brown, or almost black, with dorsal and lateral surfaces usually darker than ventral surface; dorsal and lateral body surface often with fine, dark brown reticulations or mottled lines, sometimes with irregular white or yellow blotches; tail rings often encircled with dark brown bands; pectoral fins with broad white outer margin and small brown spots forming irregular, longitudinal bands; unpaired fins with small brown spots in irregular rows. dorsal view lateral view Habitat, biology, and fisheries: Benthic, found on sand, gravel, shell-rubble, or muddy bottoms. Collected incidentally by seine, trawl, dredge, or shrimp nets; postlarvae have been taken at surface lights at night. -
The Genome of the Gulf Pipefish Enables Understanding of Evolutionary Innovations C
Small et al. Genome Biology (2016) 17:258 DOI 10.1186/s13059-016-1126-6 RESEARCH Open Access The genome of the Gulf pipefish enables understanding of evolutionary innovations C. M. Small1†, S. Bassham1†, J. Catchen1,2†, A. Amores3, A. M. Fuiten1, R. S. Brown1,4, A. G. Jones5 and W. A. Cresko1* Abstract Background: Evolutionary origins of derived morphologies ultimately stem from changes in protein structure, gene regulation, and gene content. A well-assembled, annotated reference genome is a central resource for pursuing these molecular phenomena underlying phenotypic evolution. We explored the genome of the Gulf pipefish (Syngnathus scovelli), which belongs to family Syngnathidae (pipefishes, seahorses, and seadragons). These fishes have dramatically derived bodies and a remarkable novelty among vertebrates, the male brood pouch. Results: We produce a reference genome, condensed into chromosomes, for the Gulf pipefish. Gene losses and other changes have occurred in pipefish hox and dlx clusters and in the tbx and pitx gene families, candidate mechanisms for the evolution of syngnathid traits, including an elongated axis and the loss of ribs, pelvic fins, and teeth. We measure gene expression changes in pregnant versus non-pregnant brood pouch tissue and characterize the genomic organization of duplicated metalloprotease genes (patristacins) recruited into the function of this novel structure. Phylogenetic inference using ultraconserved sequences provides an alternative hypothesis for the relationship between orders Syngnathiformes and Scombriformes. Comparisons of chromosome structure among percomorphs show that chromosome number in a pipefish ancestor became reduced via chromosomal fusions. Conclusions: The collected findings from this first syngnathid reference genome open a window into the genomic underpinnings of highly derived morphologies, demonstrating that de novo production of high quality and useful reference genomes is within reach of even small research groups. -
Humboldt Bay Fishes
Humboldt Bay Fishes ><((((º>`·._ .·´¯`·. _ .·´¯`·. ><((((º> ·´¯`·._.·´¯`·.. ><((((º>`·._ .·´¯`·. _ .·´¯`·. ><((((º> Acknowledgements The Humboldt Bay Harbor District would like to offer our sincere thanks and appreciation to the authors and photographers who have allowed us to use their work in this report. Photography and Illustrations We would like to thank the photographers and illustrators who have so graciously donated the use of their images for this publication. Andrey Dolgor Dan Gotshall Polar Research Institute of Marine Sea Challengers, Inc. Fisheries And Oceanography [email protected] [email protected] Michael Lanboeuf Milton Love [email protected] Marine Science Institute [email protected] Stephen Metherell Jacques Moreau [email protected] [email protected] Bernd Ueberschaer Clinton Bauder [email protected] [email protected] Fish descriptions contained in this report are from: Froese, R. and Pauly, D. Editors. 2003 FishBase. Worldwide Web electronic publication. http://www.fishbase.org/ 13 August 2003 Photographer Fish Photographer Bauder, Clinton wolf-eel Gotshall, Daniel W scalyhead sculpin Bauder, Clinton blackeye goby Gotshall, Daniel W speckled sanddab Bauder, Clinton spotted cusk-eel Gotshall, Daniel W. bocaccio Bauder, Clinton tube-snout Gotshall, Daniel W. brown rockfish Gotshall, Daniel W. yellowtail rockfish Flescher, Don american shad Gotshall, Daniel W. dover sole Flescher, Don stripped bass Gotshall, Daniel W. pacific sanddab Gotshall, Daniel W. kelp greenling Garcia-Franco, Mauricio louvar -
Marine Protected Species Identification Guide
Department of Primary Industries and Regional Development Marine protected species identification guide June 2021 Fisheries Occasional Publication No. 129, June 2021. Prepared by K. Travaille and M. Hourston Cover: Hawksbill turtle (Eretmochelys imbricata). Photo: Matthew Pember. Illustrations © R.Swainston/www.anima.net.au Bird images donated by Important disclaimer The Chief Executive Officer of the Department of Primary Industries and Regional Development and the State of Western Australia accept no liability whatsoever by reason of negligence or otherwise arising from the use or release of this information or any part of it. Department of Primary Industries and Regional Development Gordon Stephenson House 140 William Street PERTH WA 6000 Telephone: (08) 6551 4444 Website: dpird.wa.gov.au ABN: 18 951 343 745 ISSN: 1447 - 2058 (Print) ISBN: 978-1-877098-22-2 (Print) ISSN: 2206 - 0928 (Online) ISBN: 978-1-877098-23-9 (Online) Copyright © State of Western Australia (Department of Primary Industries and Regional Development), 2021. ii Marine protected species ID guide Contents About this guide �������������������������������������������������������������������������������������������1 Protected species legislation and international agreements 3 Reporting interactions ���������������������������������������������������������������������������������4 Marine mammals �����������������������������������������������������������������������������������������5 Relative size of cetaceans �������������������������������������������������������������������������5 -
(Teleostei: Syngnathidae: Hippocampinae) from The
Disponible en ligne sur www.sciencedirect.com Annales de Paléontologie 98 (2012) 131–151 Original article The first known fossil record of pygmy pipehorses (Teleostei: Syngnathidae: Hippocampinae) from the Miocene Coprolitic Horizon, Tunjice Hills, Slovenia La première découverte de fossiles d’hippocampes « pygmy pipehorses » (Teleostei : Syngnathidae : Hippocampinae) de l’Horizon Coprolithique du Miocène des collines de Tunjice, Slovénie a,∗ b Jure Zaloharˇ , Tomazˇ Hitij a Department of Geology, Faculty of Natural Sciences and Engineering, University of Ljubljana, Aˇskerˇceva 12, SI-1000 Ljubljana, Slovenia b Dental School, Faculty of Medicine, University of Ljubljana, Hrvatski trg 6, SI-1000 Ljubljana, Slovenia Available online 27 March 2012 Abstract The first known fossil record of pygmy pipehorses is described. The fossils were collected in the Middle Miocene (Sarmatian) beds of the Coprolitic Horizon in the Tunjice Hills, Slovenia. They belong to a new genus and species Hippotropiscis frenki, which was similar to the extant representatives of Acentronura, Amphelikturus, Idiotropiscis, and Kyonemichthys genera. Hippotropiscis frenki lived among seagrasses and macroalgae and probably also on a mud and silt bottom in the temperate shallow coastal waters of the western part of the Central Paratethys Sea. The high coronet on the head, the ridge system and the high angle at which the head is angled ventrad indicate that Hippotropiscis is most related to Idiotropiscis and Hippocampus (seahorses) and probably separated from the main seahorse lineage later than Idiotropiscis. © 2012 Elsevier Masson SAS. All rights reserved. Keywords: Seahorses; Slovenia; Coprolitic Horizon; Sarmatian; Miocene Résumé L’article décrit la première découverte connue de fossiles d’hippocampes « pygmy pipehorses ». Les fos- siles ont été trouvés dans les plages du Miocène moyen (Sarmatien) de l’horizon coprolithique dans les collines de Tunjice, en Slovénie. -
Musculoskeletal Structure of the Feeding System and Implications of Snout Elongation in Hippocampus Reidi and Dunckerocampus Dactyliophorus
Journal of Fish Biology (2011) 78, 1799–1823 doi:10.1111/j.1095-8649.2011.02957.x, available online at wileyonlinelibrary.com Musculoskeletal structure of the feeding system and implications of snout elongation in Hippocampus reidi and Dunckerocampus dactyliophorus H. Leysen*†, J. Christiaens*, B. De Kegel*, M. N. Boone‡, L. Van Hoorebeke‡ and D. Adriaens* *Research Group Evolutionary Morphology of Vertebrates, Ghent University, K.L. Ledeganckstraat 35, B-9000 Gent, Belgium and ‡UGCT, Department of Physics and Astronomy, Proeftuinstraat 86, B-9000 Gent, Belgium A thorough morphological description of the feeding apparatus in Hippocampus reidi, a long-snouted seahorse, and Dunckerocampus dactyliophorus, an extremely long-snouted pipefish, revealed spe- cialized features that might be associated with the fast and powerful suction feeding, like the two ligamentous connections between the lower jaw and the hyoid, the saddle joint of the latter with the suspensorium and the vertebro-pectoral fusion that articulates on three points with the cranium. Despite the conserved morphology of the feeding apparatus, it was found that in H. reidi the orien- tation of the occipital joint is ventrocaudal, the sternohyoideus and epaxial muscles are more bulky and both have a short tendon. In D. dactyliophorus, on the other hand, the protractor hyoidei muscle is enclosed by the mandibulo-hyoid ligament, the sternohyoideus and epaxial tendons are long and a sesamoid bone is present in the latter. These features were compared to other syngnathid species with different snout lengths to evaluate the implications of snout elongation on the musculoskeletal structure of the cranium. The arched path of the adductor mandibulae and the greater rigidity of the lower jaw might be related to elongation of the snout, as it yields an increased mechanical advantage of the lower jaw system and a reduced torque between the elements of the lower jaw during protractor hyoidei muscle contraction, respectively. -
Bluegill Anatomy
Bluegill Anatomy Grade Level: Upper elementary Subject Area: Life Science Duration: One class period (45 minutes) Next Generation Science Standards: • 4-LS1-1 – Construct an argument that plants and animals have internal and external structures that function to support survival, growth, behavior, and reproduction. o Practices of science Engaging in argument from evidence o Cross cutting concepts Structure and function Common Core State Standards – ELA/Literacy • SL.4-5.1 - Engage effectively in a range of collaborative discussions (one-on- one, in groups, and teacher-led) with diverse partners on grade appropriate topics, building on others’ ideas and expressing their own clearly. Vocabulary: See Student Vocabulary Sheet Teacher Background: Although fish are often very different in terms of coloring and body shape, they all share some basic features. Probably the most obvious feature, and one that characterizes all fish, is the presence of fins. The number, shape and function of the fins may differ from one species of fish to another. For example, the pectoral fins of a flying fish are modified for gliding while the pectoral fins of a sea robin are modified for walking. However, the pectoral fins are always located in the same approximate position in all fish, and in most cases, are used for braking and maneuvering. Most fish have other body parts in common – eyes, lateral lines, and the operculum. Materials: • Student unlabeled diagram of a bluegill – one for every two students • Student vocabulary sheet - one for every two students • Smart board or computer with LCD projector. Scan the unlabelled picture of the bluegill to use during the discussion. -
A New Pygmy Pipehorse (Pisces: Syngnathidae: Idiotropiscis) from Eastern Australia
© Copyright Australian Museum, 2004 Records of the Australian Museum (2004) Vol. 56: 163–165. ISSN 0067-1975 A New Pygmy Pipehorse (Pisces: Syngnathidae: Idiotropiscis) from Eastern Australia RUDIE H. KUITER Ichthyology, Museum Victoria, GPO Box 666E, Melbourne VIC 3001, Australia [email protected] · [email protected] ABSTRACT. A new species of pygmy pipehorse, Idiotropiscis lumnitzeri, is described from a female and two male specimens collected in the Sydney region, New South Wales, Australia. It can be distinguished from its congeners, I. australe (Waite & Hale, 1921) and I. larsonae (Dawson, 1984), in having a shorter and more posteriorly positioned frontal ridge dorsally on the head, a very short trunk (slightly longer than head, versus clearly longer than head), and in having a longer snout (2.2–2.6 in head, versus 2.8– 3.2 in I. australe and 3.7–3.8 in I. larsonae). KUITER, RUDIE H., 2004. A new pygmy pipehorse (Pisces: Syngnathidae: Idiotropiscis) from eastern Australia. Records of the Australian Museum 56(2): 163–165. I became aware of this species in the early 1990’s when Materials and methods sent an image of a pipehorse by a photographer from Sydney for identification. The subject of the photograph, taken in Methodology follows Kuiter (2001), except total length Jervis Bay, south of Sydney, was thought by the photo- (TL), measured from tip of snout to end of tail, is used as a grapher to be a juvenile seahorse. I tentatively identified it measure of overall length. Specimens were placed in a as Acentronura tentaculata. The first specimen collected in purpose-built, tray-like aquarium and photographed with a 1997 was immediately recognized as representing a new 35 mm single-reflex camera and 105 mm macro lens.