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Monograph on Dematiaceous Fungi
Monograph On Dematiaceous fungi A guide for description of dematiaceous fungi fungi of medical importance, diseases caused by them, diagnosis and treatment By Mohamed Refai and Heidy Abo El-Yazid Department of Microbiology, Faculty of Veterinary Medicine, Cairo University 2014 1 Preface The first time I saw cultures of dematiaceous fungi was in the laboratory of Prof. Seeliger in Bonn, 1962, when I attended a practical course on moulds for one week. Then I handled myself several cultures of black fungi, as contaminants in Mycology Laboratory of Prof. Rieth, 1963-1964, in Hamburg. When I visited Prof. DE Varies in Baarn, 1963. I was fascinated by the tremendous number of moulds in the Centraalbureau voor Schimmelcultures, Baarn, Netherlands. On the other hand, I was proud, that El-Sheikh Mahgoub, a Colleague from Sundan, wrote an internationally well-known book on mycetoma. I have never seen cases of dematiaceous fungal infections in Egypt, therefore, I was very happy, when I saw the collection of mycetoma cases reported in Egypt by the eminent Egyptian Mycologist, Prof. Dr Mohamed Taha, Zagazig University. To all these prominent mycologists I dedicate this monograph. Prof. Dr. Mohamed Refai, 1.5.2014 Heinz Seeliger Heinz Rieth Gerard de Vries, El-Sheikh Mahgoub Mohamed Taha 2 Contents 1. Introduction 4 2. 30. The genus Rhinocladiella 83 2. Description of dematiaceous 6 2. 31. The genus Scedosporium 86 fungi 2. 1. The genus Alternaria 6 2. 32. The genus Scytalidium 89 2.2. The genus Aurobasidium 11 2.33. The genus Stachybotrys 91 2.3. The genus Bipolaris 16 2. -
Fungal Allergy and Pathogenicity 20130415 112934.Pdf
Fungal Allergy and Pathogenicity Chemical Immunology Vol. 81 Series Editors Luciano Adorini, Milan Ken-ichi Arai, Tokyo Claudia Berek, Berlin Anne-Marie Schmitt-Verhulst, Marseille Basel · Freiburg · Paris · London · New York · New Delhi · Bangkok · Singapore · Tokyo · Sydney Fungal Allergy and Pathogenicity Volume Editors Michael Breitenbach, Salzburg Reto Crameri, Davos Samuel B. Lehrer, New Orleans, La. 48 figures, 11 in color and 22 tables, 2002 Basel · Freiburg · Paris · London · New York · New Delhi · Bangkok · Singapore · Tokyo · Sydney Chemical Immunology Formerly published as ‘Progress in Allergy’ (Founded 1939) Edited by Paul Kallos 1939–1988, Byron H. Waksman 1962–2002 Michael Breitenbach Professor, Department of Genetics and General Biology, University of Salzburg, Salzburg Reto Crameri Professor, Swiss Institute of Allergy and Asthma Research (SIAF), Davos Samuel B. Lehrer Professor, Clinical Immunology and Allergy, Tulane University School of Medicine, New Orleans, LA Bibliographic Indices. This publication is listed in bibliographic services, including Current Contents® and Index Medicus. Drug Dosage. The authors and the publisher have exerted every effort to ensure that drug selection and dosage set forth in this text are in accord with current recommendations and practice at the time of publication. However, in view of ongoing research, changes in government regulations, and the constant flow of information relating to drug therapy and drug reactions, the reader is urged to check the package insert for each drug for any change in indications and dosage and for added warnings and precautions. This is particularly important when the recommended agent is a new and/or infrequently employed drug. All rights reserved. No part of this publication may be translated into other languages, reproduced or utilized in any form or by any means electronic or mechanical, including photocopying, recording, microcopy- ing, or by any information storage and retrieval system, without permission in writing from the publisher. -
An Annotated Check-List of Ascomycota Reported from Soil and Other Terricolous Substrates in Egypt A
Journal of Basic & Applied Mycology 2 (2011): 1-27 1 © 2010 by The Society of Basic & Applied Mycology (EGYPT) An annotated check-list of Ascomycota reported from soil and other terricolous substrates in Egypt A. F. Moustafa* & A. M. Abdel – Azeem Department of Botany, Faculty of Science, University of Suez *Corresponding author: e-mail: Canal, Ismailia 41522, Egypt [email protected] Received 26/6/2010, Accepted 6/4 /2011 ____________________________________________________________________________________________________ Abstract: By screening of available sources of information, it was possible to figure out a range of 310 taxa that could be representing Egyptian Ascomycota up to the present time. In this treatment, concern was given to ascomycetous fungi of almost all terricolous substrates while phytopathogenic and aquatic forms are not included. According to the scheme proposed by Kirk et al. (2008), reported taxa in Egypt belonged to 88 genera in 31 families, and 11 orders. In view of this scheme, very few numbers of taxa remained without certain taxonomic position (incertae sedis). It is also worthy to be mentioned that among species included in the list, twenty-eight are introduced to the ascosporic mycobiota as novel taxa based on type materials collected from Egyptian habitats. The list includes also 19 species which are considered new records to the general mycobiota of Egypt. When species richness and substrate preference, as important ecological parameters, are considered, it has been noticed that Egyptian Ascomycota shows some interesting features noteworthy to be mentioned. At the substrate level, clay soils, came first by hosting a range of 108 taxa followed by desert soils (60 taxa). -
Glimpses of Antimicrobial Activity of Fungi from World
Journal on New Biological Reports 2(2): 142-162 (2013) ISSN 2319 – 1104 (Online) Glimpses of antimicrobial activity of fungi from World Kiran R. Ranadive 1* Mugdha H. Belsare 2, Subhash S. Deokule 2, Neeta V. Jagtap 1, Harshada K. Jadhav 1 and Jitendra G. Vaidya 2 1Waghire College, Saswad, Pune – 411 055, Maharashtra, India 2Department of Botany, University of Pune, Pune (Received on: 17 April, 2013; accepted on: 12 June, 2013) ABSTRACT As we all know that certain mushrooms and several other fungi show some novel properties including antimicrobial properties against bacteria, fungi and protozoan’s. These properties play very important role in the defense against several severe diseases caused by bacteria, fungi and other organisms also. In the available recent literature survey, many interesting observations have been made regarding antimicrobial activity of fungi. In particular this study shows total 316 species of 150 genera from 64 Fungal families (45 Basidiomycetous and 21 Ascomycetous families {6 Lichenized, 15 Non-Lichenized and 3 Incertae sedis)} are reported so far from world showing antibacterial activity against 32 species of 18 genera of bacteria and 22 species of 13 genera of fungi. This data materialistically adds the hidden potential of these reported fungi and it also clears the further line of action for the study of unknown medicinal fungi useful in human life. Key Words: Fungi, antimicrobial activity, microbes INTRODUCTION Fungi and animals are more closely related to one In recent in vitro study, extracts of more than 75 another than either is to plants, diverging from plants percent of polypore mushroom species surveyed more than 460 million years ago (Redecker 2000). -
On a New Species of Chaetomidium, C. Vicugnae, with a Cephalothecoid
On a new species of Chaetomidium, C. vicugnae, with a cepha- lothecoid peridium and its relationships with Chaetomiaceae (Sordariales) Francesco DOVERI Abstract: a sample of vicuña dung from a Chilean coastal desert was submitted to the attention of the au- thor, who at first sight noticed the presence of different pyrenomycetes. several hairy cleistothecia particu- larly caught his attention and were subjected to a morphological study that proved them to belong to a new species of Chaetomidium. after mentioning the main features of Sordariales and Chaetomiaceae, the author describes in detail the macro-and microscopic characters of the new species Chaetomidium vicugnae Ascomycete.org, 10 (2) : 86–96 and compares it with all the other Chaetomidium spp. with a cephalothecoid peridium. The extensive dis- Mise en ligne le 22/04/2018 cussion focuses on the characterization and relationships of the genus Chaetomidium and Chaetomidium 10.25664/ART-0231 vicugnae within the complex family Chaetomiaceae. all collections of the related species are recorded and dung is regarded as the preferential substrate. Keys are provided to sexual morph genera of Chaetomiaceae and to Chaetomidium species with a cephalothecoid peridium. Keywords: ascomycota, coprophily, germination, homoplasy, morphology, peridial frame, systematics. Introduction zing the importance of a future systematic study of vicuña dung for a better knowledge of the generic relationships in this family. My studies on coprophilous ascomycetes (Doveri, 2004, 2011) al- lowed me to meet with several representatives of Sordariales Cha- Materials and methods def. ex D. Hawksw. & o.e. erikss., an order identifiable with the so called “pyrenomycetes” s.str., i.e. -
Corylomyces: a New Genus of Sordariales from Plant Debris in France
mycological research 110 (2006) 1361–1368 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres Corylomyces: a new genus of Sordariales from plant debris in France Alberto M. STCHIGELa,*, Josep CANOa, Andrew N. MILLERb, Misericordia CALDUCHa, Josep GUARROa aUnitat de Microbiologia, Facultat de Medicina i Cie`ncies de la Salut, Universitat Rovira i Virgili, C/Sant Llorenc¸ 21, 43201 Reus, Spain bIllinois Natural History Survey, Center for Biodiversity, 1816 South Oak Street, Champaign, Illinois 61820, USA article info abstract Article history: The new genus Corylomyces, isolated from the surface of a hazelnut (Corylus avellana) in the Received 1 June 2006 French Pyrenees, is described, illustrated and compared with morphologically similar taxa. Received in revised form It is characterised by tomentose, ostiolate ascomata possessing long necks composed of 25 July 2006 erect to sinuose hairs, and one- or two-celled, opaque, lunate to reniform ascospores. Anal- Accepted 12 August 2006 yses of the SSU and LSU fragments rDNA gene sequences support its placement in the Published online 27 October 2006 Lasiosphaeriaceae (Sordariales). Corresponding Editor: ª 2006 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. David L. Hawksworth Keywords: Ascomycota Lasiosphaeriaceae Molecular phylogeny Introduction Materials and methods During a survey of ascomycetes from soil and plant debris Sampling and fungal isolation along the French Pyrenees, a rare fungus was found that was morphologically similar to members of Sordariales. It pos- Plant debris samples were collected in the ‘foreˆt communale’ sesses a combination of features that do not fit any other ge- of Saint Pe´ de Bigorre, Hautes Pyre´ne´es, France (ca 43 070N, nus in the order; it is therefore, described as a new genus. -
Carrol, F. E. Y Carrol, G. C. 1973. Senescence and Death of Conidiogenous Cell in Stemphylium
UNIVERSITAT ROVIRA I VIRGILI ESTUDIO TAXONOMICO DE LOS ASCOMYCETES DEL SUELO Akberto Miguel Stchingel Glikman ISBN:978-84-691-1881-8 /DL: T-342-2008 .- Carrol, F. E. y Carrol, G. C. 1973. Senescence and death of conidiogenous cell in Stemphylium botryosum Wallroth, Archives of Microbiology 94, 109-124. .- Carroll, G. C. y Wicklow, D. T. 1992. The fungal community: Its organization, and role in the ecosystem. Marcel Dekker Inc., New York. .- Cavalier-Smith, T. 1987. The origin of the fungi and the pseudofungi. En: Rayner, A. D. M., Brasier, C. M. y Moore, D. (eds.) Evolutionary biology of the fungi, pp. 339-353. Cambridge University Press, Cambridge. .- Cochrane, V. W. 1958. Fisiology of the fungi. John Wiley, New York. .- Cochrane, V. W. 1960. Spore germination. En: Horsfall, J. y Diamond, A. (eds.) Plant pathology: an advanced treatise, vol. 2, pp. 167-202. Academic Press, New York-London. .- Cooke, R. C. y Whipps, J. M. 1993. Ecophysiology of Fungi. Blackwell Scientific Publications, Oxford. .- Currah, R. S. 1985. Taxonomy of the Onygenales: Arthrodermataceae, Gymnoascaceae, Myxotrichaceae and Onygenaceae. Mycotaxon 24,1-2Í6. .- Chesters, C. G. C. 1949. Concerning fungi inhabiting soil. Transactions of the British Mycological Society 32, 197-216. 185 L UNIVERSITAT ROVIRA I VIRGILI ESTUDIO TAXONOMICO DE LOS ASCOMYCETES DEL SUELO Akberto Miguel Stchingel Glikman ISBN:978-84-691-1881-8 /DL: T-342-2008 .- Chinn, S. H. F. y Ledingham, R. J. 1957. Studies on the influence of various substances on the germination of Helminthosporium sativum. Canadian Journal of Botany 35, 679-701. .- Dix, N. J. y Webster, J. -
A Worldwide List of Endophytic Fungi with Notes on Ecology and Diversity
Mycosphere 10(1): 798–1079 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/19 A worldwide list of endophytic fungi with notes on ecology and diversity Rashmi M, Kushveer JS and Sarma VV* Fungal Biotechnology Lab, Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry 605014, Puducherry, India Rashmi M, Kushveer JS, Sarma VV 2019 – A worldwide list of endophytic fungi with notes on ecology and diversity. Mycosphere 10(1), 798–1079, Doi 10.5943/mycosphere/10/1/19 Abstract Endophytic fungi are symptomless internal inhabits of plant tissues. They are implicated in the production of antibiotic and other compounds of therapeutic importance. Ecologically they provide several benefits to plants, including protection from plant pathogens. There have been numerous studies on the biodiversity and ecology of endophytic fungi. Some taxa dominate and occur frequently when compared to others due to adaptations or capabilities to produce different primary and secondary metabolites. It is therefore of interest to examine different fungal species and major taxonomic groups to which these fungi belong for bioactive compound production. In the present paper a list of endophytes based on the available literature is reported. More than 800 genera have been reported worldwide. Dominant genera are Alternaria, Aspergillus, Colletotrichum, Fusarium, Penicillium, and Phoma. Most endophyte studies have been on angiosperms followed by gymnosperms. Among the different substrates, leaf endophytes have been studied and analyzed in more detail when compared to other parts. Most investigations are from Asian countries such as China, India, European countries such as Germany, Spain and the UK in addition to major contributions from Brazil and the USA. -
Phylogenetic Reassessment of the Chaetomium Globosum Species Complex
Persoonia 36, 2016: 83–133 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158516X689657 Phylogenetic reassessment of the Chaetomium globosum species complex X.W. Wang1, L. Lombard2, J.Z. Groenewald2, J. Li1, S.I.R. Videira2, R.A. Samson2, X.Z. Liu1*, P.W. Crous 2,3,4* Key words Abstract Chaetomium globosum, the type species of the genus, is ubiquitous, occurring on a wide variety of sub- strates, in air and in marine environments. This species is recognised as a cellulolytic and/or endophytic fungus. It DNA barcode is also known as a source of secondary metabolites with various biological activities, having great potential in the epitypification agricultural, medicinal and industrial fields. On the negative side, C. globosum has been reported as an air con- multi-gene phylogeny taminant causing adverse health effects and as causal agent of human fungal infections. However, the taxonomic species complex status of C. globosum is still poorly understood. The contemporary species concept for this fungus includes a systematics broadly defined morphological diversity as well as a large number of synonymies with limited phylogenetic evidence. The aim of this study is, therefore, to resolve the phylogenetic limits of C. globosum s.str. and related species. Screening of isolates in the collections of the CBS-KNAW Fungal Biodiversity Centre (The Netherlands) and the China General Microbiological Culture Collection Centre (China) resulted in recognising 80 representative isolates of the C. globosum species complex. Thirty-six species are identified based on phylogenetic inference of six loci, supported by typical morphological characters, mainly ascospore shape. -
Fungal Planet Description Sheets: 625–715
Persoonia 39, 2017: 270–467 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2017.39.11 Fungal Planet description sheets: 625–715 P.W. Crous1,2, M.J. Wingfield3, T.I. Burgess4, A.J. Carnegie5, G.E.St.J. Hardy 4, D. Smith6, B.A. Summerell7, J.F. Cano-Lira8, J. Guarro8, J. Houbraken1, L. Lombard1, M.P. Martín9, M. Sandoval-Denis1,69, A.V. Alexandrova10, C.W. Barnes11, I.G. Baseia12, J.D.P. Bezerra13, V. Guarnaccia1, T.W. May14, M. Hernández-Restrepo1, A.M. Stchigel 8, A.N. Miller15, M.E. Ordoñez16, V.P. Abreu17, T. Accioly18, C. Agnello19, A. Agustin Colmán17, C.C. Albuquerque20, D.S. Alfredo18, P. Alvarado21, G.R. Araújo-Magalhães22, S. Arauzo23, T. Atkinson24, A. Barili16, R.W. Barreto17, J.L. Bezerra25, T.S. Cabral 26, F. Camello Rodríguez27, R.H.S.F. Cruz18, P.P. Daniëls28, B.D.B. da Silva29, D.A.C. de Almeida 30, A.A. de Carvalho Júnior 31, C.A. Decock 32, L. Delgat 33, S. Denman 34, R.A. Dimitrov 35, J. Edwards 36, A.G. Fedosova 37, R.J. Ferreira 38, A.L. Firmino39, J.A. Flores16, D. García 8, J. Gené 8, A. Giraldo1, J.S. Góis 40, A.A.M. Gomes17, C.M. Gonçalves13, D.E. Gouliamova 41, M. Groenewald1, B.V. Guéorguiev 42, M. Guevara-Suarez 8, L.F.P. Gusmão 30, K. Hosaka 43, V. Hubka 44, S.M. Huhndorf 45, M. Jadan46, Ž. Jurjević47, B. Kraak1, V. Kučera 48, T.K.A. -
Supplement Hoenigl TLID 2021 Global Guideline for the Diagnosis
Supplementary appendix This appendix formed part of the original submission and has been peer reviewed. We post it as supplied by the authors. Supplement to: Hoenigl M, Salmanton-García J, Walsh TJ, et al. Global guideline for the diagnosis and management of rare mould infections: an initiative of the European Confederation of Medical Mycology in cooperation with the International Society for Human and Animal Mycology and the American Society for Microbiology. Lancet Infect Dis 2021; published online Feb 16. https://doi.org/10.1016/S1473-3099(20)30784-2. 1 Global guideline for the diagnosis and management of rare 2 mold infections: An initiative of the ECMM in cooperation 3 with ISHAM and ASM* 4 5 Authors 6 Martin Hoenigl (FECMM)1,2,3,54,55#, Jon Salmanton-García4,5,30,55, Thomas J. Walsh (FECMM)6, Marcio 7 Nucci (FECMM)7, Chin Fen Neoh (FECMM)8,9, Jeffrey D. Jenks2,3,10, Michaela Lackner (FECMM)11,55, Ro- 8 sanne Sprute4,5,55, Abdullah MS Al-Hatmi (FECMM)12, Matteo Bassetti13, Fabianne Carlesse 9 (FECMM)14,15, Tomas Freiberger16, Philipp Koehler (FECMM)4,5,17,30,55, Thomas Lehrnbecher18, Anil Ku- 10 mar (FECMM)19, Juergen Prattes (FECMM)1,55, Malcolm Richardson (FECMM)20,21,55,, Sanjay Revankar 11 (FECMM)22, Monica A. Slavin23,24, Jannik Stemler4,5,55, Birgit Spiess25, Saad J. Taj-Aldeen26, Adilia Warris 12 (FECMM)27, Patrick C.Y. Woo (FECMM)28, Jo-Anne H. Young29, Kerstin Albus4,30,55, Dorothee Arenz4,30,55, 13 Valentina Arsic-Arsenijevic (FECMM)31,54, Jean-Philippe Bouchara32,33, Terrence Rohan Chinniah34, Anu- 14 radha Chowdhary (FECMM)35, G Sybren de Hoog (FECMM)36, George Dimopoulos (FECMM)37, Rafael F. -
Chaetomium Atrobrunneum Causing Human Eumycetoma: the First Report
SYMPOSIUM Chaetomium atrobrunneum causing human eumycetoma: The first report Najwa A. Mhmoud1,2, Antonella Santona3, Maura Fiamma3, Emmanuel Edwar Siddig1, 3 1,4 3 Massimo Deligios , Sahar Mubarak BakhietID , Salvatore Rubino , Ahmed 1 Hassan FahalID * 1 Mycetoma Research Centre, University of Khartoum, Khartoum, Sudan, 2 Faculty of Medical Laboratory Sciences, University of Khartoum, Khartoum, Sudan, 3 Department of Biomedical Sciences, University of Sassari, Sassari, Italy, 4 Institute for Endemic Diseases, University of Khartoum, Khartoum, Sudan * [email protected], [email protected] Author summary In this communication, a case of black grain eumycetoma produced by the fungus C. atro- a1111111111 brunneum is reported. The patient was initially misdiagnosed with M. mycetomatis eumy- a1111111111 cetoma based on the grains' morphological and cytological features. However, further a1111111111 aerobic culture of the black grains generated a melanised fungus identified as C. atrobrun- a1111111111 neum by conventional morphological methods and by internal transcribed spacer 2 a1111111111 (ITS2) ribosomal RNA gene sequencing. This is the first-ever report of C. atrobrunneum as a eumycetoma-causative organism of black grain eumycetoma. It is essential that the causative organism is identified to the species level, as this is important for proper patient management and to predict treatment outcome and prognosis. OPEN ACCESS Citation: Mhmoud NA, Santona A, Fiamma M, Siddig EE, Deligios M, Bakhiet SM, et al. (2019) Chaetomium atrobrunneum causing human Overview eumycetoma: The first report. PLoS Negl Trop Dis Mycetoma is a chronic, progressive, granulomatous, subcutaneous inflammatory disease. It is 13(5): e0007276. https://doi.org/10.1371/journal. pntd.0007276 caused by certain fungi and bacteria, and thus, it is classified as a eumycetoma and an actino- mycetoma, respectively.