DOCSLIB.ORG

Morpho-Molecular Characterization of Microfungi Associated with Marine Based Habitats

Total Page：16

File Type：pdf, Size：1020Kb

Download full-text PDF Read full-text
Morpho-Molecular Characterization of Microfungi Associated with Marine Based Habitats Mycosphere 11(1): 1–188 (2020) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/11/1/1 Morpho-molecular characterization of microfungi associated with marine based habitats Dayarathne MC1,2,3,4, Jones EBG6, Maharachchikumbura SSN5, Devadatha B7, Sarma VV7, Khongphinitbunjong K2, Chomnunti P1,2 and Hyde KD1,3,4* 1Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 2School of Science, Mae Fah Luang University, Chiang Rai57100, Thailand 3World Agro forestry Centre East and Central Asia Office, 132 Lanhei Road, Kunming 650201, China 4Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China 5School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, People’s Republic of China 6Department of Botany and Microbiology, King Saudi University, Riyadh, Saudi Arabia 7Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry-605014, India Dayarathne MC, Jones EBG, Maharachchikumbura SSN, Devadatha B, Sarma VV, Khongphinitbunjong K, Chomnunti P, Hyde KD 2020 – Morpho-molecular characterization of microfungi associated with marine based habitats. Mycosphere 11(1), 1–188, Doi 10.5943/mycosphere/11/1/1 Abstract Our investigation of saprobic marine fungi in India, Thailand, Sweden and the UK yielded 57 species accommodated in 26 families. In the present study, we describe two new genera, 37 new species and 15 new host records. Novel genera, Halocryptosphaeria and Halotestudina are introduced within Diatrypaceae (Xylariales) and Testudinaceae (Pleosporales), respectively. The new species, Amarenographium ammophilicola, Asterodiscus mangrovei, Boeremia maritima, Chaetopsina aurantisalinicola, Chloridium salinicola, Coniochaeta arenariae, C. krabiensis, Diaporthe krabiensis, D. marina, D. salinicola, Dictyosporium marinum, Dyfrolomyces neothailandicus, Fusicolla gigantispora, Halorosellinia krabiensis, H. xylocarpi, Halotestudina muriformis, Hypoxylon aurantium, H. mangrovei, Lasiodiplodia krabiensis, Nectria marina, Nemania phetchaburiensis, N. viridis, Neocamarosporium artemisiae, N. maritimae, Neocosmospora rhizophorae, Nigrograna samueliana, N. rhizophorae, Patellaria apiculatae, Periconia salina, Peroneutypa indica, P. polysporae, Phaeoseptum carolshearerianum, P. manglicola, Rhytidhysteron bruguierae, Rimaconus multiguttulatus, Salsuginea rhizophorae and Xenoacremonium brunneosporum are introduced based on multigene analyses and morphological studies. This study also provides insights into the diversity of fungi from marine based habitats and confirm that they occupy diverse marine niches. We also demonstrate how marine based substrates, including sand dunes, are fascinating substrates for discovering novel taxa. All taxa described herein are based on morphological examination of fresh specimens supported by multigene phylogenies to better integrate taxa into higher taxonomic framework and infer their phylogenetic relationships as well as establish new species. Key words – 37 new taxa – Ascomycetes – Diversity – Dothideomycetes – DNA sequences – Ecology – Saline water – Sordariomycetes Submitted 25 July 2019, Accepted 1 October 2019, Published 13 January 2020 Corresponding Author: Kevin D. Hyde – e-mail – [email protected] 1 Table of contents The numbers of taxa characterized in this study associated with marine habitats are organized as in the “Outline of Ascomycetes” (Wijayawardene et al. 2018). Phylum Ascomycota Caval.-Sm. Class Dothideomycetes O.E. Erikss & Winka Subclass Pleosporomycetidae C.L. Schoch et al. Hysteriales Lindau Hysteriaceae Chevall 1. Hysterium rhizophorae Dayarathne & K.D. Hyde, in Hyde et al., Fungal Diversity 87: 42 (2017) 2. Hysterium thailandicum Jayasiri & K.D. Hyde, in Jayasiri, Hyde, Jones, Peršoh, Camporesi & Kang, Mycosphere 9(4): 817 (2018) 3. Rhytidhysteron bruguierae Dayarathne, sp. nov. Pleosporales Luttrell ex M.E. Barr Aigialaceae Suetrong et al. 4. Aigialus grandis Kohlm. & S. Schatz, Trans. Br. mycol. Soc. 85(4): 699 (1986) [1985] 5. Aigialus mangrovei Borse, Trans. Br. mycol. Soc. 88(3): 424 (1987) 6. Aigialus parvus S. Schatz & Kohlm., in Kohlmeyer & Schatz, Trans. Br. mycol. Soc. 85(4): 704 (1986) [1985]. 7. Ascocratera manglicola Kohlm., Can. J. Bot. 64(12): 3036 (1986) 8. Rimora mangrovei (Kohlm. & Vittal) Kohlm., Volkm.-Kohlm., Suetrong, Sakay. & E.B.G. Jones, Stud. Mycol. 64: 166 (2009) Caryosporaceae Huang Zhang, K.D. Hyde & Ariyaw 9. Acrocordiopsis patilii Borse & K.D. Hyde, Mycotaxon 34(2): 536 (1989) Dictyosporiaceae Boonmee & K.D. Hyde 10. Dictyosporium marinum Dayarathne & E.B.G. Jones, sp. nov. Didymellaceae Gruyter, Aveskamp & Verkley 11. Boeremia maritima Dayarathne & E.B.G. Jones, sp. nov. Neocamarosporiaceae Wanas., Wijayaw., Crous & K.D. Hyde 12. Neocamarosporium artemisiae Dayarathne & E.B.G. Jones, sp. nov. 13. Neocamarosporium maritimae Dayarathne & E.B.G. Jones, sp. nov. Nigrogranaceae Jaklitsch & Voglmayr 14. Nigrograna samueliana Devadatha, V.V. Sarma & E.B.G. Jones, sp. nov. 15. Nigrograna rhizophorae Dayarathne, E.B.G. Jones & K.D. Hyde, sp. nov. Periconiaceae Nann. 16. Periconia salina Dayarathne & E.B.G. Jones, sp. nov. Phaeoseptaceae S. Boonmee, Thambugala & K.D. Hyde 17. Phaeoseptum carolshearerianum Devadatha, V.V. Sarma & E.B.G. Jones, sp. nov. 18. Phaeoseptum manglicola Devadatha, V.V. Sarma & E.B.G. Jones, sp. nov. Phaeosphaeriaceae M.E. Barr 19. Amarenographium ammophilicola Dayarathne, E.B.G. Jones & K.D. Hyde, sp. nov. 2 Salsugineaceae K.D. Hyde & Tibpromma 20. Salsuginea rhizophorae Dayarathne, E.B.G. Jones & K.D. Hyde, sp. nov. Testudinaceae Arx 21. Halotestudina Dayarathne & K.D. Hyde gen nov. 22. Halotestudina muriformis Dayarathne & K.D. Hyde, sp. nov. 23. Verruculina enalia (Kohlm.) Kohlm. & Volkm.-Kohlm., Mycol. Res. 94(5): 689 (1990) Dothideomycetes orders incertae sedis Botryosphaeriales C.L. Schoch et al. Botryosphaeriaceae Theiss. & H. Syd. 24. Lasiodiplodia krabiensis Dayarathne, sp. nov. Dyfrolomycetales K.L. Pang et al. Pleurotremataceae Walt. Watson (= Dyfrolomycetaceae K.D. Hyde et al.) 25. Dyfrolomyces neothailandicus Dayarathne, Jones E.B.G. & K.D. Hyde, sp. nov. 26. Dyfrolomyces thailandicus Dayar., E.B.G. Jones & K.D. Hyde, in Hyde et al., Fungal Diversity: 78(1): 1–237 (2016 Patellariales D. Hawksw. & O.E. Erikss. Patellariaceae Corda 27. Patellaria apiculatae Dayarathne & K.D. Hyde, sp. nov. Stigmatodiscales Voglmayr & Jaklitsch Stigmatodiscaceae Voglmayr & Jaklitsch 28. Asterodiscus mangrovei Dayarathne, E.B.G. Jones & K.D. Hyde, sp. nov. Tubeufiales Boonmee & K.D. Hyde Tubeufiaceae M.E. Barr 29. Kamalomyces mangrovei Dayarathne & K.D. Hyde, in Hyde et al., Fungal Diversity: 96:1–242 (2019) Class Sordariomycetes O.E. Erikss. & Winka Subclass Diaporthomycetidae Senan. et al. Diaporthales Nannf. Diaporthaceae Höhn. ex Wehm. 30. Diaporthe salinicola Dayarathne, sp. nov. 31. Diaporthe krabiensis Dayarathne, sp. nov. 32. Diaporthe marina Dayarathne, sp. nov. Subclass Hypocreomycetidae O.E. Erikss. & Winka Hypocreales Lindau Nectriaceae Tul. & C. Tul. 33. Chaetopsina aurantisalinicola Dayarathne, E.B.G. Jones & K.D. Hyde, sp. nov. 34. Xenoacremonium brunneosporum Dayarathne, E.B.G. Jones & K.D. Hyde, sp. nov. 35. Fusicolla gigantispora Dayarathne, E.B.G Jones & K.D. Hyde, sp. nov. 36. Nectria marina Dayarathne, E.B.G Jones & K.D. Hyde, sp. nov. 37. Neocosmospora rhizophorae Dayarathne, sp. nov. 3 Ophiocordycipitaceae G.H. Sung et al. 38. Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson, FEMS Microbiol. Lett. 321(2): 144 (2011) Subclass Sordariomycetidae O.E. Erikss & Winka Boliniales P.F. Cannon Boliniaceae Rick 39. Camarops ustulinoides (Henn.) Nannf., Svensk bot. Tidskr. 66(4): 370 (1972) Chaetosphaeriales Huhndorf et al. Chaetosphaeriaceae Réblová et al. 40. Chloridium salinicola Dayarathne & E.B.G. Jones, sp. nov. 41. Rimaconus multiguttulatus Dayarathne & K.D. Hyde, sp. nov. Coniochaetales Huhndorf et al. (= Cordanales M. Hern.- Rest. & Crous) Coniochaetaceae Malloch & Cain 42. Coniochaeta arenariae Dayarathne & E.B.G Jones, sp. nov. 43. Coniochaeta krabiensis Dayarathne & E.B.G Jones, sp. nov. Subclass Xylariomycetidae O.E. Erikss & Winka Xylariales Nannf. Diatrypaceae Nitschke 44. Diatrype mangrovei Dayarathne & K.D. Hyde, Cryptog. Mycol. (2019) 45. Halocryptosphaeria Dayarathne, Devadatha, Sarma, V.V. & K.D. Hyde, gen nov. 46. Halocryptosphaeria bathurstensis (Dayarathne & K.D. Hyde) Dayarathne, V.V. Sarma, Devadatha & K.D. Hyde, comb. nov. 47. Halocryptovalsa avicenniae (Abdel-Wahab, Bahkali & E.B.G. Jones) Dayarathne & K.D. Hyde, Cryptog. Mycol. (2019) 48. Halodiatrype salinicola Dayarathne & K.D. Hyde, Mycosphere 7(5): 617 (2016) 49. Peroneutypa scoparia (Schwein.) Carmarán & A.I. Romero, in Carmarán, Romero & Giussani, Fungal Diversity 23: 84 (2006) 50. Peroneutypa indica Devadatha V.V. Sarma & E.B.G Jones, sp. nov. 51. Peroneutypa polysporae Devadatha, V.V. Sarma & E.B.G Jones, sp. nov. Hypoxylaceae DC. 52. Hypoxylon aurantium Dayarathne, E.B.G. Jones & K.D. Hyde, sp. nov. 53. Hypoxylon mangrovei Dayarathne, E.B.G. Jones & K.D. Hyde, sp. nov. Xylariaceae Tul. & C. Tul. (= Clypeosphaeriaceae G. Winter) 54. Halorosellinia rhizophorae Dayarathne, E.B.G. Jones & K.D. Hyde 55. Halorosellinia krabiensis Dayarathne, & K.D. Hyde, sp. nov. 56. Halorosellinia xylocarpi Dayarathne & K.D. Hyde, sp. nov. 57. Nemania maritima Y.M. Ju & J.D. Rogers, Nova Hedwigia
Load more

Recommended publications
  • Diversity of Endophytic Fungi from Different Verticillium-Wilt-Resistant
    J. Microbiol. Biotechnol. (2014), 24(9), 1149–1161 http://dx.doi.org/10.4014/jmb.1402.02035 Research Article Review jmb Diversity of Endophytic Fungi from Different Verticillium-Wilt-Resistant Gossypium hirsutum and Evaluation of Antifungal Activity Against Verticillium dahliae In Vitro Zhi-Fang Li†, Ling-Fei Wang†, Zi-Li Feng, Li-Hong Zhao, Yong-Qiang Shi, and He-Qin Zhu* State Key Laboratory of Cotton Biology, Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Anyang, Henan 455000, P. R. China Received: February 18, 2014 Revised: May 16, 2014 Cotton plants were sampled and ranked according to their resistance to Verticillium wilt. In Accepted: May 16, 2014 total, 642 endophytic fungi isolates representing 27 genera were recovered from Gossypium hirsutum root, stem, and leaf tissues, but were not uniformly distributed. More endophytic fungi appeared in the leaf (391) compared with the root (140) and stem (111) sections. First published online However, no significant difference in the abundance of isolated endophytes was found among May 19, 2014 resistant cotton varieties. Alternaria exhibited the highest colonization frequency (7.9%), *Corresponding author followed by Acremonium (6.6%) and Penicillium (4.8%). Unlike tolerant varieties, resistant and Phone: +86-372-2562280; susceptible ones had similar endophytic fungal population compositions. In three Fax: +86-372-2562280; Verticillium-wilt-resistant cotton varieties, fungal endophytes from the genus Alternaria were E-mail: [email protected] most frequently isolated, followed by Gibberella and Penicillium. The maximum concentration † These authors contributed of dominant endophytic fungi was observed in leaf tissues (0.1797). The evenness of stem equally to this work.
    [Show full text]
  • Phaeoseptaceae, Pleosporales) from China
    Mycosphere 10(1): 757–775 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/17 Morphological and phylogenetic studies of Pleopunctum gen. nov. (Phaeoseptaceae, Pleosporales) from China Liu NG1,2,3,4,5, Hyde KD4,5, Bhat DJ6, Jumpathong J3 and Liu JK1*,2 1 School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, P.R. China 2 Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang 550006, P.R. China 3 Faculty of Agriculture, Natural Resources and Environment, Naresuan University, Phitsanulok 65000, Thailand 4 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 5 Mushroom Research Foundation, Chiang Rai 57100, Thailand 6 No. 128/1-J, Azad Housing Society, Curca, P.O., Goa Velha 403108, India Liu NG, Hyde KD, Bhat DJ, Jumpathong J, Liu JK 2019 – Morphological and phylogenetic studies of Pleopunctum gen. nov. (Phaeoseptaceae, Pleosporales) from China. Mycosphere 10(1), 757–775, Doi 10.5943/mycosphere/10/1/17 Abstract A new hyphomycete genus, Pleopunctum, is introduced to accommodate two new species, P. ellipsoideum sp. nov. (type species) and P. pseudoellipsoideum sp. nov., collected from decaying wood in Guizhou Province, China. The genus is characterized by macronematous, mononematous conidiophores, monoblastic conidiogenous cells and muriform, oval to ellipsoidal conidia often with a hyaline, elliptical to globose basal cell. Phylogenetic analyses of combined LSU, SSU, ITS and TEF1α sequence data of 55 taxa were carried out to infer their phylogenetic relationships. The new taxa formed a well-supported subclade in the family Phaeoseptaceae and basal to Lignosphaeria and Thyridaria macrostomoides.
    [Show full text]
  • Monilochaetes and Allied Genera of the Glomerellales, and a Reconsideration of Families in the Microascales
    available online at www.studiesinmycology.org StudieS in Mycology 68: 163–191. 2011. doi:10.3114/sim.2011.68.07 Monilochaetes and allied genera of the Glomerellales, and a reconsideration of families in the Microascales M. Réblová1*, W. Gams2 and K.A. Seifert3 1Department of Taxonomy, Institute of Botany of the Academy of Sciences, CZ – 252 43 Průhonice, Czech Republic; 2Molenweg 15, 3743CK Baarn, The Netherlands; 3Biodiversity (Mycology and Botany), Agriculture and Agri-Food Canada, Ottawa, Ontario, K1A 0C6, Canada *Correspondence: Martina Réblová, [email protected] Abstract: We examined the phylogenetic relationships of two species that mimic Chaetosphaeria in teleomorph and anamorph morphologies, Chaetosphaeria tulasneorum with a Cylindrotrichum anamorph and Australiasca queenslandica with a Dischloridium anamorph. Four data sets were analysed: a) the internal transcribed spacer region including ITS1, 5.8S rDNA and ITS2 (ITS), b) nc28S (ncLSU) rDNA, c) nc18S (ncSSU) rDNA, and d) a combined data set of ncLSU-ncSSU-RPB2 (ribosomal polymerase B2). The traditional placement of Ch. tulasneorum in the Microascales based on ncLSU sequences is unsupported and Australiasca does not belong to the Chaetosphaeriaceae. Both holomorph species are nested within the Glomerellales. A new genus, Reticulascus, is introduced for Ch. tulasneorum with associated Cylindrotrichum anamorph; another species of Reticulascus and its anamorph in Cylindrotrichum are described as new. The taxonomic structure of the Glomerellales is clarified and the name is validly published. As delimited here, it includes three families, the Glomerellaceae and the newly described Australiascaceae and Reticulascaceae. Based on ITS and ncLSU rDNA sequence analyses, we confirm the synonymy of the anamorph generaDischloridium with Monilochaetes.
    [Show full text]
  • Download Full Article in PDF Format
    Cryptogamie, Mycologie, 2013, 34 (4): 303-319 © 2013 Adac. Tous droits réservés Phylogeny and morphology of Leptosphaerulina saccharicola sp. nov. and Pleosphaerulina oryzae and relationships with Pithomyces Rungtiwa PHOOKAMSAK a, b, c, Jian-Kui LIU a, b, Ekachai CHUKEATIROTE a, b, Eric H. C. McKENZIE d & Kevin D. HYDE a, b, c * a Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand b School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand c International Fungal Research & Development Centre, Research Institute of Resource Insects, Chinese Academy of Forestry, Kunming, Yunnan, 650224, China d Landcare Research, Private Bag 92170, Auckland, New Zealand Abstract – A Dothideomycete species, associated with leaf spots of sugarcane (Saccharum officinarum), was collected from Nakhonratchasima Province, Thailand. A single ascospore isolate was obtained and formed the asexual morph in culture. ITS, LSU, RPB2 and TEF1α gene regions were sequenced and analyzed with molecular data from related taxa. In a phylogenetic analysis the new isolate clustered with Leptosphaerulina americana, L. arachidicola, L. australis and L. trifolii (Didymellaceae) and the morphology was also comparable with Leptosphaerulina species. Leptosphaerulina saccharicola is introduced to accommodate this new collection which is morphologically and phylogenetically distinct from other species of Leptosphaerulina. A detailed description and illustration is provided for the new species, which is compared with similar taxa. The type specimen of Pleosphaerulina oryzae, is transferred to Leptosphaerulina. It is redescribed and is a distinct species from L. australis, with which it was formerly synonymized. Leptosphaerulina species have been linked to Pithomyces but the lack of phylogenetic support for this link is discussed.
    [Show full text]
  • Illuminating Type Collections of Nectriaceous Fungi in Saccardo's
    Persoonia 45, 2020: 221–249 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2020.45.09 Illuminating type collections of nectriaceous fungi in Saccardo’s fungarium N. Forin1, A. Vizzini 2,3,*, S. Nigris1,4, E. Ercole2, S. Voyron2,3, M. Girlanda2,3, B. Baldan1,4,* Key words Abstract Specimens of Nectria spp. and Nectriella rufofusca were obtained from the fungarium of Pier Andrea Saccardo, and investigated via a morphological and molecular approach based on MiSeq technology. ITS1 and ancient DNA ITS2 sequences were successfully obtained from 24 specimens identified as ‘Nectria’ sensu Saccardo (including Ascomycota 20 types) and from the type specimen of Nectriella rufofusca. For Nectria ambigua, N. radians and N. tjibodensis Hypocreales only the ITS1 sequence was recovered. On the basis of morphological and molecular analyses new nomenclatural Illumina combinations for Nectria albofimbriata, N. ambigua, N. ambigua var. pallens, N. granuligera, N. peziza subsp. ribosomal sequences reyesiana, N. radians, N. squamuligera, N. tjibodensis and new synonymies for N. congesta, N. flageoletiana, Sordariomycetes N. phyllostachydis, N. sordescens and N. tjibodensis var. crebrior are proposed. Furthermore, the current classifi- cation is confirmed for Nectria coronata, N. cyanostoma, N. dolichospora, N. illudens, N. leucotricha, N. mantuana, N. raripila and Nectriella rufofusca. This is the first time that these more than 100-yr-old specimens are subjected to molecular analysis, thereby providing important new DNA sequence data authentic for these names. Article info Received: 25 June 2020; Accepted: 21 September 2020; Published: 23 November 2020. INTRODUCTION to orange or brown perithecia which do not change colour in 3 % potassium hydroxide (KOH) or 100 % lactic acid (LA) Nectria, typified with N.
    [Show full text]
  • Phylogeny and Morphology of Premilcurensis Gen
    Phytotaxa 236 (1): 040–052 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2015 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.236.1.3 Phylogeny and morphology of Premilcurensis gen. nov. (Pleosporales) from stems of Senecio in Italy SAOWALUCK TIBPROMMA1,2,3,4,5, ITTHAYAKORN PROMPUTTHA6, RUNGTIWA PHOOKAMSAK1,2,3,4, SARANYAPHAT BOONMEE2, ERIO CAMPORESI7, JUN-BO YANG1,2, ALI H. BHAKALI8, ERIC H. C. MCKENZIE9 & KEVIN D. HYDE1,2,4,5,8 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, People’s Republic of China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, P. R. China 5Mushroom Research Foundation, 128 M.3 Ban Pa Deng T. Pa Pae, A. Mae Taeng, Chiang Mai 50150, Thailand 6Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand 7A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy; A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314, Brescia, Italy; Società per gli Studi Naturalistici della Romagna, C.P. 144, Bagnacavallo (RA), Italy 8Botany and Microbiology Department, College of Science, King Saud University, Riyadh, KSA 11442, Saudi Arabia 9Manaaki Whenua Landcare Research, Private Bag 92170, Auckland, New Zealand *Corresponding author: Dr. Itthayakorn Promputtha, Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.
    [Show full text]
  • Mycosphere Notes 225–274: Types and Other Specimens of Some Genera of Ascomycota
    Mycosphere 9(4): 647–754 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/4/3 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Notes 225–274: types and other specimens of some genera of Ascomycota Doilom M1,2,3, Hyde KD2,3,6, Phookamsak R1,2,3, Dai DQ4,, Tang LZ4,14, Hongsanan S5, Chomnunti P6, Boonmee S6, Dayarathne MC6, Li WJ6, Thambugala KM6, Perera RH 6, Daranagama DA6,13, Norphanphoun C6, Konta S6, Dong W6,7, Ertz D8,9, Phillips AJL10, McKenzie EHC11, Vinit K6,7, Ariyawansa HA12, Jones EBG7, Mortimer PE2, Xu JC2,3, Promputtha I1 1 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 2 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming 650201, China 3 World Agro Forestry Centre, East and Central Asia, 132 Lanhei Road, Kunming 650201, Yunnan Province, People’s Republic of China 4 Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China 5 Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China 6 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 7 Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand 8 Department Research (BT), Botanic Garden Meise, Nieuwelaan 38, BE-1860 Meise, Belgium 9 Direction Générale de l'Enseignement non obligatoire et de la Recherche scientifique, Fédération Wallonie-Bruxelles, Rue A.
    [Show full text]
  • Molecular Systematics of the Marine Dothideomycetes
    available online at www.studiesinmycology.org StudieS in Mycology 64: 155–173. 2009. doi:10.3114/sim.2009.64.09 Molecular systematics of the marine Dothideomycetes S. Suetrong1, 2, C.L. Schoch3, J.W. Spatafora4, J. Kohlmeyer5, B. Volkmann-Kohlmeyer5, J. Sakayaroj2, S. Phongpaichit1, K. Tanaka6, K. Hirayama6 and E.B.G. Jones2* 1Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90112, Thailand; 2Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand; 3National Center for Biothechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.; 4Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, U.S.A.; 5Institute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, North Carolina 28557, U.S.A.; 6Faculty of Agriculture & Life Sciences, Hirosaki University, Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan *Correspondence: E.B. Gareth Jones, [email protected] Abstract: Phylogenetic analyses of four nuclear genes, namely the large and small subunits of the nuclear ribosomal RNA, transcription elongation factor 1-alpha and the second largest RNA polymerase II subunit, established that the ecological group of marine bitunicate ascomycetes has representatives in the orders Capnodiales, Hysteriales, Jahnulales, Mytilinidiales, Patellariales and Pleosporales. Most of the fungi sequenced were intertidal mangrove taxa and belong to members of 12 families in the Pleosporales: Aigialaceae, Didymellaceae, Leptosphaeriaceae, Lenthitheciaceae, Lophiostomataceae, Massarinaceae, Montagnulaceae, Morosphaeriaceae, Phaeosphaeriaceae, Pleosporaceae, Testudinaceae and Trematosphaeriaceae. Two new families are described: Aigialaceae and Morosphaeriaceae, and three new genera proposed: Halomassarina, Morosphaeria and Rimora.
    [Show full text]
  • Two Pleosporalean Root-Colonizing Fungi, Fuscosphaeria Hungarica Gen
    Mycological Progress (2021) 20:39–50 https://doi.org/10.1007/s11557-020-01655-8 ORIGINAL ARTICLE Two pleosporalean root-colonizing fungi, Fuscosphaeria hungarica gen. et sp. nov. and Delitschia chaetomioides, from a semiarid grassland in Hungary Alexandra Pintye1 & Dániel G. Knapp2 Received: 15 May 2020 /Revised: 14 November 2020 /Accepted: 29 November 2020 # The Author(s) 2020 Abstract In this study, we investigated two unidentified lineages of root-colonizing fungi belonging to the order Pleosporales (Dothideomycetes), which were isolated from Festuca vaginata (Poaceae), a dominant grass species in the semiarid sandy grass- lands of Hungary. For molecular phylogenetic studies, seven loci (internal transcribed spacer, partial large subunit and small subunit region of nrRNA, partial transcription elongation factor 1-α, RNA polymerase II largest subunit, RNA polymerase II second largest subunit, and ß-tubulin genes) were amplified and sequenced. Based on morphology and multilocus phylogenetic analyses, we found that one lineage belonged to Delitschia chaetomioides P. Karst. (Delitschiaceae), and the isolates of the other lineage represented a novel monotypic genus in the family Trematosphaeriaceae (suborder Massarineae). For this lineage, we proposed a new genus, Fuscosphaeria, represented by a single species, F. hungarica. In both lineages, only immature and degenerated sporocarps could be induced. These were sterile, black, globose, or depressed globose structures with numerous mycelioid appendages submerged in culture media or on the
    [Show full text]
  • Resurrection and Emendation of the Hypoxylaceae, Recognised from a Multigene Phylogeny of the Xylariales
    Mycol Progress DOI 10.1007/s11557-017-1311-3 ORIGINAL ARTICLE Resurrection and emendation of the Hypoxylaceae, recognised from a multigene phylogeny of the Xylariales Lucile Wendt1,2 & Esteban Benjamin Sir3 & Eric Kuhnert1,2 & Simone Heitkämper1,2 & Christopher Lambert1,2 & Adriana I. Hladki3 & Andrea I. Romero4,5 & J. Jennifer Luangsa-ard6 & Prasert Srikitikulchai6 & Derek Peršoh7 & Marc Stadler1,2 Received: 21 February 2017 /Revised: 12 April 2017 /Accepted: 19 April 2017 # The Author(s) 2017. This article is an open access publication Abstract A multigene phylogeny was constructed, including polymerase II (RPB2), and beta-tubulin (TUB2). Specimens a significant number of representative species of the main were selected based on more than a decade of intensive mor- lineages in the Xylariaceae and four DNA loci the internal phological and chemotaxonomic work, and cautious taxon transcribed spacer region (ITS), the large subunit (LSU) of sampling was performed to cover the major lineages of the the nuclear rDNA, the second largest subunit of the RNA Xylariaceae; however, with emphasis on hypoxyloid species. The comprehensive phylogenetic analysis revealed a clear-cut This article is part of the “Special Issue on ascomycete systematics in segregation of the Xylariaceae into several major clades, honor of Richard P. Korf who died in August 2016”. which was well in accordance with previously established morphological and chemotaxonomic concepts. One of these The present paper is dedicated to Prof. Jack D. Rogers, on the occasion of his fortcoming 80th birthday. clades contained Annulohypoxylon, Hypoxylon, Daldinia,and other related genera that have stromatal pigments and a Section Editor: Teresa Iturriaga and Marc Stadler nodulisporium-like anamorph.
    [Show full text]
  • Discovery of the Teleomorph of the Hyphomycete, Sterigmatobotrys Macrocarpa, and Epitypification of the Genus to Holomorphic Status
    available online at www.studiesinmycology.org StudieS in Mycology 68: 193–202. 2011. doi:10.3114/sim.2011.68.08 Discovery of the teleomorph of the hyphomycete, Sterigmatobotrys macrocarpa, and epitypification of the genus to holomorphic status M. Réblová1* and K.A. Seifert2 1Department of Taxonomy, Institute of Botany of the Academy of Sciences, CZ – 252 43, Průhonice, Czech Republic; 2Biodiversity (Mycology and Botany), Agriculture and Agri- Food Canada, Ottawa, Ontario, K1A 0C6, Canada *Correspondence: Martina Réblová, [email protected] Abstract: Sterigmatobotrys macrocarpa is a conspicuous, lignicolous, dematiaceous hyphomycete with macronematous, penicillate conidiophores with branches or metulae arising from the apex of the stipe, terminating with cylindrical, elongated conidiogenous cells producing conidia in a holoblastic manner. The discovery of its teleomorph is documented here based on perithecial ascomata associated with fertile conidiophores of S. macrocarpa on a specimen collected in the Czech Republic; an identical anamorph developed from ascospores isolated in axenic culture. The teleomorph is morphologically similar to species of the genera Carpoligna and Chaetosphaeria, especially in its nonstromatic perithecia, hyaline, cylindrical to fusiform ascospores, unitunicate asci with a distinct apical annulus, and tapering paraphyses. Identical perithecia were later observed on a herbarium specimen of S. macrocarpa originating in New Zealand. Sterigmatobotrys includes two species, S. macrocarpa, a taxonomic synonym of the type species, S. elata, and S. uniseptata. Because no teleomorph was described in the protologue of Sterigmatobotrys, we apply Article 59.7 of the International Code of Botanical Nomenclature. We epitypify (teleotypify) both Sterigmatobotrys elata and S. macrocarpa to give the genus holomorphic status, and the name S.
    [Show full text]
  • Composition and Diversity of Fungal Decomposers of Submerged Wood in Two Lakes in the Brazilian Amazon State of Para´
    Hindawi International Journal of Microbiology Volume 2020, Article ID 6582514, 9 pages https://doi.org/10.1155/2020/6582514 Research Article Composition and Diversity of Fungal Decomposers of Submerged Wood in Two Lakes in the Brazilian Amazon State of Para´ Eveleise SamiraMartins Canto ,1,2 Ana Clau´ dia AlvesCortez,3 JosianeSantana Monteiro,4 Flavia Rodrigues Barbosa,5 Steven Zelski ,6 and João Vicente Braga de Souza3 1Programa de Po´s-Graduação da Rede de Biodiversidade e Biotecnologia da Amazoˆnia Legal-Bionorte, Manaus, Amazonas, Brazil 2Universidade Federal do Oeste do Para´, UFOPA, Santare´m, Para´, Brazil 3Instituto Nacional de Pesquisas da Amazoˆnia, INPA, Laborato´rio de Micologia, Manaus, Amazonas, Brazil 4Museu Paraense Emilio Goeldi-MPEG, Bele´m, Para´, Brazil 5Universidade Federal de Mato Grosso, UFMT, Sinop, Mato Grosso, Brazil 6Miami University, Department of Biological Sciences, Middletown, OH, USA Correspondence should be addressed to Eveleise Samira Martins Canto; [email protected] and Steven Zelski; [email protected] Received 25 August 2019; Revised 20 February 2020; Accepted 4 March 2020; Published 9 April 2020 Academic Editor: Giuseppe Comi Copyright © 2020 Eveleise Samira Martins Canto et al. *is is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Aquatic ecosystems in tropical forests have a high diversity of microorganisms, including fungi, which
    [Show full text]